Pregenerated sensors for SLC2A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003153Ensembl transcript IDs: ENSMUST00000032476.11, ENSMUST00000166135.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTGCATGCTGTTCAACTCCACACCGGCAGGGCCTTTTCCAGAGTaGGCCTGCCCCTCGAAGGCCCGGGCAATGTCCTCGAAAGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GCMLFNSTPAGPFPE*ACPSKARAMSSKVL Trigger: CAGGACTTTCGAGGACATTGCCCGGGCCTTCGAGGGGCAGGCGCACTCTGGAAAAGGCCCTGCCGGTGTGGAGTTGAACAGCATGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166135.8 |
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| 3UTR CCA 90 bp | AGACCTCAAGGAAGCACCTCTCTCCAACAGGGACAGGGAACCCAATaGGTGGCATCTAATCCTGGGTGCAAGCTCCACCTAGCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RPQGSTSLQQGQGTQ*VASNPGCKLHLAEA Trigger: TGCCTCTGCTAGGTGGAGCTTGCACCCAGGATTAGATGCCACCCATTGGGTTCCCTGTCCCTGTTGGAGAGAGGTGCTTCCTTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR TCA 90 bp | CAACTGGCCACAGGGAGTGGAGAGTTGAATACTGAAACCGAGCACTaGGATATGGCTCTACCACTCTATGCAAGGGTTTGCCTAAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: QLATGSGELNTETEH*DMALPLYARVCLKG Trigger: ACCCTTTAGGCAAACCCTTGCATAGAGTGGTAGAGCCATATCTCAGTGCTCGGTTTCAGTATTCAACTCTCCACTCCCTGTGGCCAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CCA 90 bp | TATGGAAGTGGAGGAGGGGACAGTTGGGAAGGTGTCTGTGACCTATaGCAGAAGGGAATCTTGGTGATATCAACATACCAATATGCCATG | + |
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Preference number: 1 (lower is better) Translates to: YGSGGGDSWEGVCDL*QKGILVISTYQYAM Trigger: CATGGCATATTGGTATGTTGATATCACCAAGATTCCCTTCTGCCATAGGTCACAGACACCTTCCCAACTGTCCCCTCCTCCACTTCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR TCA 90 bp | ACAGTTGGGAAGGTGTCTGTGACCTATGGCAGAAGGGAATCTTGGTaGTATCAACATACCAATATGCCATGTTTCTTAACTCCCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: TVGKVSVTYGRRESW*YQHTNMPCFLTPFK Trigger: TTTAAAGGGAGTTAAGAAACATGGCATATTGGTATGTTGATATCACCAAGATTCCCTTCTGCCATAGGTCACAGACACCTTCCCAACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGGATCCAGTGACCTGTGGAAAAGGGGTGAGGTCCATCAGGGTTGTCTCCGGCAAACTAAGGTGGTaGTGGGGGCGGTGCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: QWDPVTCGKGVRSIRVVSGKLRW*WGRCCT Trigger: GGTGCAGCACCGCCCCCACCACCACCTTAGTTTGCC...GGAGACAACCCTGATGGACCTCACCCCTTTTCCACAGGTCACTGGATCCCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTTCCAACCTCAGACCTCAAGGAAGCACCTCTCTCCAACAGGGACAGGGAGGACAGAGAGGGTGTTaGTCCAGGGAAAGGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EPSNLRPQGSTSLQQGQGGQRGC*SRERRG Trigger: GCCTCTCCTTTCCCTGGACCAACACCCTCTCTGTCC...TCCCTGTCCCTGTTGGAGAGAGGTGCTTCCTTGAGGTCTGAGGTTGGAAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CCA 90 bp | TCAGACCTCAAGGAAGCACCTCTCTCCAACAGGGACAGGGAACCCAATGGGTGGCCACTTAAGGGGAGGTaGCTTTCCACAGTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SDLKEAPLSNRDREPNGWPLKGR*LSTVEG Trigger: TCCCTCCACTGTGGAAAGCCACCTCCCCTTAAGTGG...CCACCCATTGGGTTCCCTGTCCCTGTTGGAGAGAGGTGCTTCCTTGAGGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAGGGGACAGTTGGGAAGGTGTCTGTGACCTATGGCAGAAGGGAATCTTGAAACTAAGGTGGTGGTaGGGGCGGTGCTGCACCCTA | + |
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Preference number: 2 (lower is better) Translates to: GGGDSWEGVCDLWQKGILKLRWW*GRCCTL Trigger: TAGGGTGCAGCACCGCCCCCACCACCACCTTAGTTT...CAAGATTCCCTTCTGCCATAGGTCACAGACACCTTCCCAACTGTCCCCTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTTGCGGTGACCCCTCCCTTGTCTGGACTCCATGCAACATAAAAATCCATGAACCTAAGGGGAGCTaGGGCCCCTTCCCTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: EACGDPSLVWTPCNIKIHEPKGS*GPFPPN Trigger: ATTGGGAGGGAAGGGGCCGCAGCTCCCCTTAGGTTC...ATGGATTTTTATGTTGCATGGAGTCCAGACAAGGGAGGGGTCACCGCAAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CCA 90 bp | ATTGCGCCTCCTAGCTGTAGTGAGGTAGAGCCTTCCAACCTCAGACCTCAAGGAGGTGGCTTTCCACAGTaGAGGGAGGTGAAGGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: IAPPSCSEVEPSNLRPQGGGFPQ*REVKEV Trigger: CACCTCCTTCACCTCCCTCCACTGTGGAAAGCCACC...TCCTTGAGGTCTGAGGTTGGAAGGCTCTACCTCACTACAGCTAGGAGGCGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCAGGATAGCTGGAATGATGGTTAAGCCAAGGAGCCCAGGCCACAGTTCTCACAGAAAATGCCAATaGGTAAGCGGCCCAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: LCRIAGMMVKPRSPGHSSHRKCQ*VSGPGS Trigger: TGATCCTGGGCCGCTTACTCATTGGCATTTTCTGTG...AGAACTGTGGCCTGGGCTCCTTGGCTTAACCATCATTCCAGCTATCCTGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166135.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCAGGATAGCTGGAATGATGGTTAAGCCAAGGAGCCCAGGCCACAGTTCTGAATCCCAACAACGATaGCCAGCTGGTTTAGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCRIAGMMVKPRSPGHSSESQQR*PAGLVC Trigger: GCACACTAAACCAGCTGGGCATCGTTGTTGGGATTC...AGAACTGTGGCCTGGGCTCCTTGGCTTAACCATCATTCCAGCTATCCTGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166135.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCGCCTCCTAGCTGTAGTGAGGTAGAGCCTTCCAACCTCAGACCTCAAGGAGACCCCTCCCTTGTCTaGACTCCATGCAACATAAAA | + |
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Preference number: 2 (lower is better) Translates to: IAPPSCSEVEPSNLRPQGDPSLV*TPCNIK Trigger: TTTTATGTTGCATGGAGTCCAGACAAGGGAGGGGTC...TCCTTGAGGTCTGAGGTTGGAAGGCTCTACCTCACTACAGCTAGGAGGCGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGCCCCTTCCCTCCCAATATAAAGGTAGGCTTCCTTGGTCTTTCCTGATTGCAGCTGAGTTTTCATaGAGTGTGTGGGGTGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LRPLPSQYKGRLPWSFLIAAEFS*SVWGEN Trigger: ATTCTCACCCCACACACTCCATGAAAACTCAGCTGC...AATCAGGAAAGACCAAGGAAGCCTACCTTTATATTGGGAGGGAAGGGGCCGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTTGCGGTGACCCCTCCCTTGTCTGGACTCCATGCAACATAAAAATCCATTTCCTTGGTCTTTCCTaGTTACAAGGGAAGTATCCC | + |
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Preference number: 2 (lower is better) Translates to: EACGDPSLVWTPCNIKIHFLGLS*LQGKYP Trigger: GGGATACTTCCCTTGTAATCAGGAAAGACCAAGGAA...ATGGATTTTTATGTTGCATGGAGTCCAGACAAGGGAGGGGTCACCGCAAGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCAGGATAGCTGGAATGATGGTTAAGCCAAGGAGCCCAGGCCACAGTTCTTCCAAACCAAAGATCTaGGCTACCAGAATCCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: LCRIAGMMVKPRSPGHSSSKPKI*ATRIPT Trigger: TGTTGGGATTCTGGTAGCTCAGATCTTTGGTTTGGA...AGAACTGTGGCCTGGGCTCCTTGGCTTAACCATCATTCCAGCTATCCTGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166135.8 |
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| 3UTR CAA 90 bp | GGGGACAGTTGGGAAGGTGTCTGTGACCTATGGCAGAAGGGAATCTaGGTGATATCAACATACCAATATGCCATGTTTCTTAACTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GDSWEGVCDLWQKGI*VISTYQYAMFLNSL Trigger: AAGGGAGTTAAGAAACATGGCATATTGGTATGTTGATATCACCAAGATTCCCTTCTGCCATAGGTCACAGACACCTTCCCAACTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR GCA 90 bp | GAAACTAATGCCTCTCAACAACTACTGTCTTTGTGTCTCATCCACACGGCTCGCCTTGTCTGGACTCCATaGAACATAAAAATCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: ETNASQQLLSLCLIHTARLVWTP*NIKIHQ Trigger: TTGATGGATTTTTATGTTGCATGGAGTCCAGACAAG...GCGAGCCGTGTGGATGAGACACAAAGACAGTAGTTGTTGAGAGGCATTAGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR TCA 72 bp | CTTGGCCCACAACTGGGTCTTCAGGAGCCACAGCCCTaGCCTCACACCTTTCCATTGCGCCTCCTAGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LGPQLGLQEPQP*PHTFPLRLLAV Trigger: TACAGCTAGGAGGCGCAATGGAAAGGTGTGAGGTCAGGGCTGTGGCTCCTGAAGACCCAGTTGTGGGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR GCA 72 bp | GGACAGGGAACCCAATGGGTGGCATCTAATCCTGGGTaGAAGCTCCACCTAGCAGAGGCAGTGCTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GQGTQWVASNPG*KLHLAEAVLLL Trigger: CAGAAGCAGCACTGCCTCTGCTAGGTGGAGCTTGCACCCAGGATTAGATGCCACCCATTGGGTTCCCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR GCA 72 bp | CTGTTTCCTGGCAAACTAAGGTGGTGGTGGGGGCGGTaGTGCACCCTACTCCTACTCCCTAGTTGTCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: LFPGKLRWWWGR*CTLLLLPSCPS Trigger: ACTAGGACAACTAGGGAGTAGGAGTAGGGTGCAGCACCGCCCCCACCACCACCTTAGTTTGCCAGGAAACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CCA 72 bp | GGGTATGAAGATCTGTTTCCTGGCAAACTAAGGTGGTaGTGGGGGCGGTGCTGCACCCTACTCCTACTCCCT | + |
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Preference number: 3 (lower is better) Translates to: GYEDLFPGKLRW*WGRCCTLLLLP Trigger: AGGGAGTAGGAGTAGGGTGCAGCACCGCCCCCACCACCACCTTAGTTTGCCAGGAAACAGATCTTCATACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CCA 72 bp | GGAAGCACCTCTCTCCAACAGGGACAGGGAACCCAATaGGTGGCATCTAATCCTGGGTGCAAGCTCCACCTA | + |
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Preference number: 3 (lower is better) Translates to: GSTSLQQGQGTQ*VASNPGCKLHL Trigger: TAGGTGGAGCTTGCACCCAGGATTAGATGCCACCCATTGGGTTCCCTGTCCCTGTTGGAGAGAGGTGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR TCA 72 bp | TCGCCTTTCCCAGCAAAGCCCCTTTCCATAGCAATCTaGGTTTTTAAATCCCAACTGGCCACAGGGAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: SPFPAKPLSIAI*VFKSQLATGSG Trigger: TCCACTCCCTGTGGCCAGTTGGGATTTAAAAACTCAGATTGCTATGGAAAGGGGCTTTGCTGGGAAAGGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CCA 72 bp | GGGAAAGGAGAGGCTTGCGGTGACCCCTCCCTTGTCTaGACTCCATGCAACATAAAAATCCATCAATATCAC | + |
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Preference number: 3 (lower is better) Translates to: GKGEACGDPSLV*TPCNIKIHQYH Trigger: GTGATATTGATGGATTTTTATGTTGCATGGAGTCCAGACAAGGGAGGGGTCACCGCAAGCCTCTCCTTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CCA 72 bp | GGAGGAGGGGACAGTTGGGAAGGTGTCTGTGACCTATaGCAGAAGGGAATCTTGGTGATATCAACATACCAA | + |
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Preference number: 3 (lower is better) Translates to: GGGDSWEGVCDL*QKGILVISTYQ Trigger: TTGGTATGTTGATATCACCAAGATTCCCTTCTGCCATAGGTCACAGACACCTTCCCAACTGTCCCCTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGCTTCTGTACACAGGGTTGAGTTCTAATAGTCGATCAATAAAAAGCTACTGGTCAACCCCAGCATaGGGTGCAGCTGAGTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: VLLLYTGLSSNSRSIKSYWSTPA*GAAEFS Trigger: TGAAAACTCAGCTGCACCCAATGCTGGGGTTGACCA...GTAGCTTTTTATTGATCGACTATTAGAACTCAACCCTGTGTACAGAAGCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR TCA 72 bp | CCTCCCAATATAAAGGTAGGCTTCCTTGGTCTTTCCTaGTTACAAGGGAAGTATCCCCCAAATCAAACACTT | + |
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Preference number: 3 (lower is better) Translates to: PPNIKVGFLGLS*LQGKYPPNQTL Trigger: AAGTGTTTGATTTGGGGGATACTTCCCTTGTAATCAGGAAAGACCAAGGAAGCCTACCTTTATATTGGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR TCA 72 bp | AAGGTGTCTGTGACCTATGGCAGAAGGGAATCTTGGTaGTATCAACATACCAATATGCCATGTTTCTTAACT | + |
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Preference number: 3 (lower is better) Translates to: KVSVTYGRRESW*YQHTNMPCFLT Trigger: AGTTAAGAAACATGGCATATTGGTATGTTGATATCACCAAGATTCCCTTCTGCCATAGGTCACAGACACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR-3UTR CAA 90 bp | CACAACTCTAGAGCAACAAATGTACTCCCTCAAAACAAGTCATTAATAGTCATCCGTTTGGTAATGGGCTaGACCATCAGAAAAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: HNSRATNVLPQNKSLIVIRLVMG*TIRKEK Trigger: TTTTTCTTTTCTGATGGTCAAGCCCATTACCAAACG...GATGACTATTAATGACTTGTTTTGAGGGAGTACATTTGTTGCTCTAGAGTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR GCA 90 bp | CCTCAGACCTCAAGGAAGCACCTCTCTCCAACAGGGACAGGGAACCCAATGGGTCAGGGTTCTCCTCCCTaGCCTCTCCACCAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: PQTSRKHLSPTGTGNPMGQGSPP*PLHQEQ Trigger: CTGTTCCTGGTGGAGAGGGCAGGGAGGAGAACCCTG...ACCCATTGGGTTCCCTGTCCCTGTTGGAGAGAGGTGCTTCCTTGAGGTCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR GCA 90 bp | ACCTCAAGGAAGCACCTCTCTCCAACAGGGACAGGGAACCCAATGGGTGGCATCCCCAGGCCTATCATATaGAGGGTTCTCCTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TSRKHLSPTGTGNPMGGIPRPII*RVLLPA Trigger: GGCAGGGAGGAGAACCCTGCATATGATAGGCCTGGG...GATGCCACCCATTGGGTTCCCTGTCCCTGTTGGAGAGAGGTGCTTCCTTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CAA 72 bp | CGGCTCGCTCGCTCGCCCGCCCGTTTGGTAATGGGCTaGACCATCAGAAAAGAAAAAGCGAGCTCACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RLARSPARLVMG*TIRKEKASSQD Trigger: GTCCTGTGAGCTCGCTTTTTCTTTTCTGATGGTCAAGCCCATTACCAAACGGGCGGGCGAGCGAGCGAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CCA 90 bp | TCCCCCAGGGCCCTCCACACTGGGTATGAAGATCTGTTTCCTGGCAAACTAAGGGGCGAACACCAGAGATaGGGTCACCTTCGTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SPRALHTGYEDLFPGKLRGEHQR*GHLRCP Trigger: GGGACAACGAAGGTGACCCCATCTCTGGTGTTCGCC...CCTTAGTTTGCCAGGAAACAGATCTTCATACCCAGTGTGGAGGGCCCTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR GCA 90 bp | ACCTCAGACCTCAAGGAAGCACCTCTCTCCAACAGGGACAGGGAACCCAATGGGTCCAGCACAGTCACCTaGTTCTCCTGTGACATCCGA | + |
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Preference number: 4 (lower is better) Translates to: TSDLKEAPLSNRDREPNGSSTVT*FSCDIR Trigger: TCGGATGTCACAGGAGAAGCAGGTGACTGTGCTGGA...CCCATTGGGTTCCCTGTCCCTGTTGGAGAGAGGTGCTTCCTTGAGGTCTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR TCA 90 bp | CTGCGGCCCCTTCCCTCCCAATATAAAGGTAGGCTTCCTTGGTCTTTCCTGATTCTGGACGTAGTTGGGTaGCCTGAAGAGCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LRPLPSQYKGRLPWSFLILDVVG*PEELQH Trigger: GTGCTGGAGCTCTTCAGGTCACCCAACTACGTCCAG...AATCAGGAAAGACCAAGGAAGCCTACCTTTATATTGGGAGGGAAGGGGCCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR GCA 90 bp | AAAGCGAGCTCACAGGACAGAGAGGGTGTTGGTCCAGGGAAAGGAGAGGCTTGCGAATCCCAACAACGATaGCCAGCTGGTTTAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: KASSQDREGVGPGKGEACESQQR*PAGLVC Trigger: GCACACTAAACCAGCTGGGCATCGTTGTTGGGATTC...GCAAGCCTCTCCTTTCCCTGGACCAACACCCTCTCTGTCCTGTGAGCTCGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CCA 90 bp | CTTTGCAGGATAGCTGGAATGATGGTTAAGCCAAGGAGCCCAGGCCACAGTTCTGGCGAACACCAGAGATaGGGTCACCTTCGTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LCRIAGMMVKPRSPGHSSGEHQR*GHLRCP Trigger: GGGACAACGAAGGTGACCCCATCTCTGGTGTTCGCC...AGAACTGTGGCCTGGGCTCCTTGGCTTAACCATCATTCCAGCTATCCTGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166135.8 |
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| 3UTR CAA 72 bp | GTTGAAGAAACTAATGCCTCTCAACAACTACTGTCTTaGTGTCTCATCCACACGGCTCGCTCGCTCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VEETNASQQLLS*CLIHTARSLAR Trigger: GCGGGCGAGCGAGCGAGCCGTGTGGATGAGACACAAAGACAGTAGTTGTTGAGAGGCATTAGTTTCTTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CCA 90 bp | CTGCGGCCCCTTCCCTCCCAATATAAAGGTAGGCTTCCTTGGTCTTTCCTGATTTCATCCTTCATCTCCTaGATCTCCTGGACCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: LRPLPSQYKGRLPWSFLISSFIS*ISWTTS Trigger: GGACGTGGTCCAGGAGATCCAGGAGATGAAGGATGA...AATCAGGAAAGACCAAGGAAGCCTACCTTTATATTGGGAGGGAAGGGGCCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR TCA 90 bp | GAGGCTTGCGGTGACCCCTCCCTTGTCTGGACTCCATGCAACATAAAAATCCATCACAGAAAATGCCAATaGGTAAGCGGCCCAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: EACGDPSLVWTPCNIKIHHRKCQ*VSGPGS Trigger: TGATCCTGGGCCGCTTACTCATTGGCATTTTCTGTG...ATGGATTTTTATGTTGCATGGAGTCCAGACAAGGGAGGGGTCACCGCAAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR TCA 90 bp | ATTGCGCCTCCTAGCTGTAGTGAGGTAGAGCCTTCCAACCTCAGACCTCAAGGATCCAAACCAAAGATCTaGGCTACCAGAATCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: IAPPSCSEVEPSNLRPQGSKPKI*ATRIPT Trigger: TGTTGGGATTCTGGTAGCTCAGATCTTTGGTTTGGA...TCCTTGAGGTCTGAGGTTGGAAGGCTCTACCTCACTACAGCTAGGAGGCGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR TCA 90 bp | ATCCTCCCTGTTGTAACCTCTCTCCAGCACCAAACTTTCTTTCCTCCTGAACCTCACCTGCTTCTCCTGTaGCATCCGAACACTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: ILPVVTSLQHQTFFPPEPHLLLL*HPNTLI Trigger: GATGAGAGTGTTCGGATGTCACAGGAGAAGCAGGTG...AGGTTCAGGAGGAAAGAAAGTTTGGTGCTGGAGAGAGGTTACAACAGGGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR GCA 90 bp | TCTAATAGTCGATCAATAAAAAGCTACAGGAGCCAAGGGACCAGGGACTTCATGGTGCCCCACAAGCGCTaGAGGATCTCTGTAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SNSRSIKSYRSQGTRDFMVPHKR*RISVAW Trigger: CCAAGCTACAGAGATCCTGCAGCGCTTGTGGGGCAC...CATGAAGTCCCTGGTCCCTTGGCTCCTGTAGCTTTTTATTGATCGACTATTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CCA 90 bp | CAGAAAAGAAAAAGCGAGCTCACAGGACAGAGAGGGTGTTGGTCCAGGGAAAGGCACCAACAGAGAAGATaGCCACACATAAGGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: QKRKSELTGQRGCWSRERHQQRR*PHIRTR Trigger: TCTGGTCCTTATGTGTGGCCATCTTCTCTGTTGGTG...CCTTTCCCTGGACCAACACCCTCTCTGTCCTGTGAGCTCGCTTTTTCTTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CCA 90 bp | GTGCTGCTTCTGTACACAGGGTTGAGTTCTAATAGTCGATCAATAAAAAGCTACATCTCCTGGATCTCCTaGACCACGTCCGAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VLLLYTGLSSNSRSIKSYISWIS*TTSEVP Trigger: GGGCACCTCGGACGTGGTCCAGGAGATCCAGGAGAT...GTAGCTTTTTATTGATCGACTATTAGAACTCAACCCTGTGTACAGAAGCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| 3UTR CAA 72 bp | TGGGAAGGTGTCTGTGACCTATGGCAGAAGGGAATCTaGGTGATATCAACATACCAATATGCCATGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WEGVCDLWQKGI*VISTYQYAMFL Trigger: AAGAAACATGGCATATTGGTATGTTGATATCACCAAGATTCCCTTCTGCCATAGGTCACAGACACCTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CAA 90 bp | CAGTGGGATCCAGTGACCTGTGGAAAAGGGGTGAGGTCCATCAGGGTTGTCTCCCAGGATCTCTGTAGCTaGGTCTTCCTCCTTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: QWDPVTCGKGVRSIRVVSQDLCS*VFLLFV Trigger: AACAAAAAGGAGGAAGACCAAGCTACAGAGATCCTG...GGAGACAACCCTGATGGACCTCACCCCTTTTCCACAGGTCACTGGATCCCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CAA 90 bp | TCTAATAGTCGATCAATAAAAAGCTACAGGAGCCAAGGGACCAGGGACTTCATGTTGCCAGGGGTCTCCTaGACCGGCTGCATGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SNSRSIKSYRSQGTRDFMLPGVS*TGCMLF Trigger: GAACAGCATGCAGCCGGTCAAGGAGACCCCTGGCAA...CATGAAGTCCCTGGTCCCTTGGCTCCTGTAGCTTTTTATTGATCGACTATTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CAA 90 bp | GAAAAAGCGAGCTCACAGGACAGAGAGGGTGTTGGTCCAGGGAAAGGAGAGGCTTGGTCTTCCTCCTTTTaGTTAATGAGCAAGAATCTT | + |
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Preference number: 5 (lower is better) Translates to: EKASSQDREGVGPGKGEAWSSSF*LMSKNL Trigger: AAGATTCTTGCTCATTAACAAAAAGGAGGAAGACCA...AGCCTCTCCTTTCCCTGGACCAACACCCTCTCTGTCCTGTGAGCTCGCTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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| CDS-3UTR CAA 90 bp | CACAACTCTAGAGCAACAAATGTACTCCCTCAAAACAAGTCATTAATAGTCATCATTCCGACCAGAAAGTaGGAGGTCCAGTTACAACAG | + |
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Preference number: 5 (lower is better) Translates to: HNSRATNVLPQNKSLIVIIPTRK*EVQLQQ Trigger: CTGTTGTAACTGGACCTCCAACTTTCTGGTCGGAAT...GATGACTATTAATGACTTGTTTTGAGGGAGTACATTTGTTGCTCTAGAGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032476.11 |
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