Pregenerated sensors for SLC2A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027690Ensembl transcript IDs: ENSMUST00000029240.14, ENSMUST00000163536.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCATCAGCGCCACGAGGATGGGCTGTCGGTAATTGGCATCCGTaGAGAGCTGGATCACGGAGACCTTCTGCTCAGTCGATGCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: AASAPRGWAVGNWHP*RAGSRRPSAQSMPL Trigger: AAGAGGCATCGACTGAGCAGAAGGTCTCCGTGATCCAGCTCTTCACGGATGCCAATTACCGACAGCCCATCCTCGTGGCGCTGATGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CCA 90 bp | GTTTTTCACTGGGTGGGTTTGGTGGCACATGTCAGCCCTGGCCCTTaGAAGATCAGTGTAGGAGTTCAAGAGCCCAGCCTAGGATGCATG | + |
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Preference number: 1 (lower is better) Translates to: VFHWVGLVAHVSPGP*KISVGVQEPSLGCM Trigger: CATGCATCCTAGGCTGGGCTCTTGAACTCCTACACTGATCTTCCAAGGGCCAGGGCTGACATGTGCCACCAAACCCACCCAGTGAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR GCA 90 bp | ACACACTCTCTGAAGACGCCAGGAATTCCATTTGTACAGCAGCTTTaGGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGCGA | + |
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Preference number: 1 (lower is better) Translates to: THSLKTPGIPFVQQL*VVGPNHSSSGILQR Trigger: TCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTCTTCAGAGAGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CCA 90 bp | AAAAGGTGTTTTTCACTGGGTGGGTTTGGTGGCACATGTCAGCCCTaGCCCTTGGAAGATCAGTGTAGGAGTTCAAGAGCCCAGCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KRCFSLGGFGGTCQP*PLEDQCRSSRAQPR Trigger: CCTAGGCTGGGCTCTTGAACTCCTACACTGATCTTCCAAGGGCCAGGGCTGACATGTGCCACCAAACCCACCCAGTGAAAAACACCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR TCA 90 bp | GACTATGGAGGAAGCACCACTCCATCCAAGGCCTTGAGCATCTGTTaGTCTTGCTGTGTGCAGTGGGGAATGAGGAATGACCATCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: DYGGSTTPSKALSIC*SCCVQWGMRNDHLS Trigger: GCTGAGATGGTCATTCCTCATTCCCCACTGCACACAGCAAGATCAACAGATGCTCAAGGCCTTGGATGGAGTGGTGCTTCCTCCATAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR GCA 90 bp | AGAGACAGCCGTGAAGATCATGTTGATGGCCCCAACACCAATGGTTaGATACACAGGCTGGCTGATGCCAGCTGTCTGAAAAATGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RDSREDHVDGPNTNG*IHRLADASCLKNAG Trigger: ACCAGCATTTTTCAGACAGCTGGCATCAGCCAGCCTGTGTATGCAACCATTGGTGTTGGGGCCATCAACATGATCTTCACGGCTGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CCA 90 bp | TTCCCGTCTTCCGAAAACGCAGGAAAGGAAAGAGAAAGGCATGCGTaGATCTCGAGTCCCCTTGTCCACCTTAACTTGCTGTTAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: FPSSENAGKERERHA*ISSPLVHLNLLLDC Trigger: ACAGTCTAACAGCAAGTTAAGGTGGACAAGGGGACTCGAGATCCACGCATGCCTTTCTCTTTCCTTTCCTGCGTTTTCGGAAGACGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR TCA 90 bp | CTTGAGCATCTGTTGATCTTGCTGTGTGCAGTGGGGAATGAGGAATaGCCATCTCAGCCAGGAGCACGATGTAGGCTACTTACATTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LEHLLILLCAVGNEE*PSQPGARCRLLTFL Trigger: GAGAAATGTAAGTAGCCTACATCGTGCTCCTGGCTGAGATGGTCATTCCTCATTCCCCACTGCACACAGCAAGATCAACAGATGCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR GCA 90 bp | AGCAGCTTTGCGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTaGAGCGATTTCCTCAAAAGACTTTCCTTTGGTTTCTGGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: SSFAWWGRTTLLPEF*SDFLKRLSFGFWNF Trigger: AAAGTTCCAGAAACCAAAGGAAAGTCTTTTGAGGAAATCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR TCA 90 bp | AACTCATCCAGGCGAATTTATCCAGCAGCACAAGTCCCACCGACATaGAGATGGTGCAGAAAAACATGCCAATCATCCCGGTTAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: NSSRRIYPAAQVPPT*RWCRKTCQSSRLGT Trigger: TGTTCCTAACCGGGATGATTGGCATGTTTTTCTGCACCATCTTCATGTCGGTGGGACTTGTGCTGCTGGATAAATTCGCCTGGATGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CCA 90 bp | TGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTGTAATTTaGGACAGTAGTGTCATTTGCCTGCACAGATCAGTGCCAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: WLPDKQQTCVSLTVI*DSSVICLHRSVPAR Trigger: TCTTGCTGGCACTGATCTGTGCAGGCAAATGACACTACTGTCCCAAATTACAGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CCA 90 bp | CCGGAATTCTGCAGCGATTTCCTCAAAAGACTTTCCTTTGGTTTCTaGAACTTTAAAGAATGTAAACAGGGTGAAGACCAGGACCACCCC | + |
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Preference number: 1 (lower is better) Translates to: PEFCSDFLKRLSFGF*NFKECKQGEDQDHP Trigger: GGGGTGGTCCTGGTCTTCACCCTGTTTACATTCTTTAAAGTTCCAGAAACCAAAGGAAAGTCTTTTGAGGAAATCGCTGCAGAATTCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR TCA 90 bp | GTCTGTCCATCTGCCCATCCATATATCCATCCATCCATCCATGCATaGATAATTGATCTTCTGCTCTACTTTGTAAGGAAAACAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: VCPSAHPYIHPSIHA*IIDLLLYFVRKTAW Trigger: CCAAGCTGTTTTCCTTACAAAGTAGAGCAGAAGATCAATTATTCATGCATGGATGGATGGATGGATATATGGATGGGCAGATGGACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR TCA 90 bp | TATATGTTGATATTTCTAATCGGAGTCTGTAAAAATTCTTCCAAATaGATAAACGATACTCCTGGGTGTAGTCGCACACCGAGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: YMLIFLIGVCKNSSK*INDTPGCSRTPRKE Trigger: TTCCTTCCTCGGTGTGCGACTACACCCAGGAGTATCGTTTATTCATTTGGAAGAATTTTTACAGACTCCGATTAGAAATATCAACATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR GCA 90 bp | ATCATCCCGGTTAGGAACAGGGTCCGCCGCCCTGCCTTCTCCACAAGCAGCACAAACTGCTGGGCCATGTaGAGCATCAGCGCCACGAGG | + |
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Preference number: 2 (lower is better) Translates to: IIPVRNRVRRPAFSTSSTNCWAM*SISATR Trigger: CCTCGTGGCGCTGATGCTGCACATGGCCCAGCAGTT...TGTGCTGCTTGTGGAGAAGGCAGGGCGGCGGACCCTGTTCCTAACCGGGATGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CAA 90 bp | GCAATGTACTGGAAGCAGAGGGCGATGACAAAATTGCAGACCCAGTaGCTGAAGGCAGCCAGTGCCAGAGCCGTAGGACGGGGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AMYWKQRAMTKLQTQ*LKAASARAVGRGPW Trigger: CCAAGGACCCCGTCCTACGGCTCTGGCACTGGCTGCCTTCAGCAACTGGGTCTGCAATTTTGTCATCGCCCTCTGCTTCCAGTACATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCTTTGCGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGCGAGGAAGCAGAGGGCGATaGCAAAATTGCAGACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QQLCVVGPNHSSSGILQRGSRGR*QNCRPS Trigger: ACTGGGTCTGCAATTTTGTCATCGCCCTCTGCTTCC...TCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGGACAGTAGTGTCATTTaGCTGCACAGATCAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEDSSVI*LHRSVP Trigger: TGGCACTGATCTGTGCAGGCAAATGACACTACTGTC...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGAATCGCAGCTTGGAGACATTTTaGTTGCCTGATAAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGMCLCLPTPRRQRQENRSLETF*LPDKQQ Trigger: CTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT...GCGATTCTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAAACATGCCAATCATCCCGGTTAGGAACAGGGTCCGCCGCCCTGCCTTCTCAGCGCCACGAGGATaGGCTGTCGGTAATTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QKNMPIIPVRNRVRRPAFSAPRG*AVGNWH Trigger: ATGCCAATTACCGACAGCCCATCCTCGTGGCGCTGA...GAAGGCAGGGCGGCGGACCCTGTTCCTAACCGGGATGATTGGCATGTTTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCGCCCTGCCTTCTCCACAAGCAGCACAGAGACAGCCGTGAAGATCATGTTGATTCCTGAGAACTGCTaGGCCATGTGCAGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRPAFSTSSTETAVKIMLIPENC*AMCSIS Trigger: GCTGATGCTGCACATGGCCCAGCAGTTCTCAGGAAT...CAACATGATCTTCACGGCTGTCTCTGTGCTGCTTGTGGAGAAGGCAGGGCGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGAATCGCATGTCCTTTAGCTTCTaGTCTGGGGCTAAGAACATT | + |
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Preference number: 2 (lower is better) Translates to: GGMCLCLPTPRRQRQENRMSFSF*SGAKNI Trigger: AATGTTCTTAGCCCCAGATCAGAAGCTAAAGGACAT...GCGATTCTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR GCA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGTGGAGACATTTTGGTTaGCTGATAAGCAGCAGACCT | + |
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Preference number: 2 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEWRHFG*LISSRP Trigger: AGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCA...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CAA 90 bp | CCTGCCTTCTCCACAAGCAGCACAGAGACAGCCGTGAAGATCATGTaGATGGCCCCAACACCAATGGTTGCATACACAGGCTGGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: PAFSTSSTETAVKIM*MAPTPMVAYTGWLM Trigger: CATCAGCCAGCCTGTGTATGCAACCATTGGTGTTGGGGCCATCAACATGATCTTCACGGCTGTCTCTGTGCTGCTTGTGGAGAAGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CAA 90 bp | CACACACTCTCTGAAGACGCCAGGAATTCCATTTGTACAGCAGCTTaGCGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: HTLSEDARNSICTAA*RGGAEPLFFRNSAA Trigger: CGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTCTTCAGAGAGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGGATAGCAGTTGTAGCTaGAGATTTCTTAGTCACGTG | + |
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Preference number: 2 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEDSSCS*RFLSHV Trigger: CACGTGACTAAGAAATCTGCAGCTACAACTGCTATC...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGAGGAAGATGGCAGTCATGCTCACGTAACTCATCCAGGCGAATTTATCCAGGGTCCGCCGCCCTaGCTTCTCCACAAGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DKEEDGSHAHVTHPGEFIQGPPP*LLHKQH Trigger: GTGCTGCTTGTGGAGAAGGCAGGGCGGCGGACCCTG...GATAAATTCGCCTGGATGAGTTACGTGAGCATGACTGCCATCTTCCTCTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGGCAGCCAGTGCCAGAGCCGTAGGACGGGGTCCTTGGCTGAAAAATTCAGGAAGATGGCAGTCATaGTCACGTAACTCATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LKAASARAVGRGPWLKNSGRWQS*SRNSSR Trigger: CCTGGATGAGTTACGTGAGCATGACTGCCATCTTCC...TGAATTTTTCAGCCAAGGACCCCGTCCTACGGCTCTGGCACTGGCTGCCTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGGTAAGGAAAACAGCTTaGAGACATTTTGGTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEVRKTA*RHFGCL Trigger: CAGGCAACCAAAATGTCTCCAAGCTGTTTTCCTTAC...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CAA 90 bp | TGTTTTTCACTGGGTGGGTTTGGTGGCACATGTCAGCCCTGGCCCTaGGAAGATCAGTGTAGGAGTTCAAGAGCCCAGCCTAGGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: CFSLGGFGGTCQPWP*EDQCRSSRAQPRMH Trigger: ATGCATCCTAGGCTGGGCTCTTGAACTCCTACACTGATCTTCCAAGGGCCAGGGCTGACATGTGCCACCAAACCCACCCAGTGAAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGAATCGCAAAGCAGCGATATGTTaGAAGCTCTTCAATTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGMCLCLPTPRRQRQENRKAAIC*KLFNFS Trigger: ACTGAAATTGAAGAGCTTTCAACATATCGCTGCTTT...GCGATTCTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR GCA 90 bp | GACGCCAGGAATTCCATTTGTACAGCAGCTTTGCGTGGTGGGGCCGAACCACTCCTTCAAGCTTTTCTTTaGCCTGACTTCCTCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: DARNSICTAALRGGAEPLLQAFL*PDFLFQ Trigger: TTGGAAGAGGAAGTCAGGGCAAAGAAAAGCTTGAAG...GAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCGCCCTGCCTTCTCCACAAGCAGCACAGAGACAGCCGTGAAGATCATGTTGTTATATAAAGGTATCTaGGGCTTTCTGGACAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RRPAFSTSSTETAVKIMLLYKGI*GFLDRR Trigger: TCTTCTGTCCAGAAAGCCCCAGATACCTTTATATAA...CAACATGATCTTCACGGCTGTCTCTGTGCTGCTTGTGGAGAAGGCAGGGCGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGACAAAGAGGAAGATGGCAGTCATGCTCACGTAACTCATCCAGGCGAATTTAGCAGTAGCAGACACTaGAGAAGAGCTGGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: TDKEEDGSHAHVTHPGEFSSSRH*RRAGTA Trigger: TGCTGTGCCAGCTCTTCTGCAGTGTCTGCTACTGCT...AAATTCGCCTGGATGAGTTACGTGAGCATGACTGCCATCTTCCTCTTTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTAGGCACATGTCAGCCCTaGCCCTTGGAAGATCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: HRELLIDTNGSASSERVLGTCQP*PLEDQC Trigger: ACACTGATCTTCCAAGGGCCAGGGCTGACATGTGCC...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACGTGGGGAATGAGGAATaGCCATCTCAGCCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNVGNEE*PSQPGA Trigger: TGCTCCTGGCTGAGATGGTCATTCCTCATTCCCCAC...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR GCA 90 bp | GAACCAGGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTTGGTGTTTCCAGATTTCTTAGTCACGTaGTTTAAAAAGCAGCGATAT | + |
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Preference number: 2 (lower is better) Translates to: EPGESGGCDVSGAHLVFPDFLVT*FKKQRY Trigger: ATATCGCTGCTTTTTAAAGCACGTGACTAAGAAATC...TGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACCTGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CAA 90 bp | AGAGAAAGGCATGCGTGGATCTCGAGTCCCCTTGTCCACCTTAACTaGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: RERHAWISSPLVHLN*LLDCKIPKVCVNKV Trigger: GACTTTGTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAGGGGACTCGAGATCCACGCATGCCTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | GACAAAGAGGAAGATGGCAGTCATGCTCACGTAACTCATCCAGGCGAATTTATCAGTAAAATATCCCATTaGTTCCTGAGAACTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DKEEDGSHAHVTHPGEFISKISH*FLRTAG Trigger: CCCAGCAGTTCTCAGGAATCAATGGGATATTTTACT...GATAAATTCGCCTGGATGAGTTACGTGAGCATGACTGCCATCTTCCTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGAAGATGGCAGTCATGCTCACGTAACTCATCCAGGCGAATTTATCCACTTCTGCTCAGTCGATaGCTCTTCCTTTTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: QRGRWQSCSRNSSRRIYPLLLSR*LFLFFL Trigger: AAGAAAGAAAAGGAAGAGGCATCGACTGAGCAGAAG...TGGATAAATTCGCCTGGATGAGTTACGTGAGCATGACTGCCATCTTCCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTACAAAGACTGAAGTGGTaGGAAACTAACATGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: HRELLIDTNGSASSERVLQRLKW*ETNMLW Trigger: CCAAAGCATGTTAGTTTCTCACCACTTCAGTCTTTG...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGGAGACATTTTGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTTTCCAGATTTCCCTGTaGTTGACCCAGTTTATTAGA | + |
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Preference number: 2 (lower is better) Translates to: SLETFWLPDKQQTCVSLTFQISL*LTQFIR Trigger: TCTAATAAACTGGGTCAATCACAGGGAAATCTGGAA...AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CAA 90 bp | TCTTCTGCTCTACTTTGTAAGGAAAACAGCTTGGAGACATTTTGGTaGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTGTAATTTGG | + |
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Preference number: 2 (lower is better) Translates to: SSALLCKENSLETFW*PDKQQTCVSLTVIW Trigger: CCAAATTACAGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAGAGCAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACCCATCCATCCATGCATaGATAATTGATCTTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNPSIHA*IIDLLL Trigger: GAGCAGAAGATCAATTATTCATGCATGGATGGATGG...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTACAGCAGTACTGTTTTTaGAAAGGTGTTTTTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: HRELLIDTNGSASSERVLQQYCF*KGVFHW Trigger: CCAGTGAAAAACACCTTTTCAAAAACAGTACTGCTG...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTATTAAGTAAACAGAGATaGGGCAGAGTAAGAGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: HRELLIDTNGSASSERVLLSKQR*GRVRGM Trigger: CATACCTCTTACTCTGCCCCATCTCTGTTTACTTAA...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR-3UTR CCA 90 bp | AACACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTCCTTAACTGTAATTTaGGACAGTAGTGTCATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NTESCSLIPMVLHPQREFSLTVI*DSSVIC Trigger: GCAAATGACACTACTGTCCCAAATTACAGTTAAGGA...AAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR GCA 90 bp | AACACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTAGCATTATGACTATTTaGATAGTGTTTGCACTGACT | + |
|
Preference number: 2 (lower is better) Translates to: NTESCSLIPMVLHPQREFSIMTI*IVFALT Trigger: AGTCAGTGCAAACACTATGCAAATAGTCATAATGCT...AAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACACCAGTATCATTTGCTaGAAACTGAACTTCCTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNTSIIC*KLNFLE Trigger: TTCTAGGAAGTTCAGTTTCCAGCAAATGATACTGGT...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACGCCTACTTAGAAATCTaGATTTTTGCTCTGAATACA | + |
|
Preference number: 2 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNAYLEI*IFALNT Trigger: TGTATTCAGAGCAAAAATGCAGATTTCTAAGTAGGC...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR TCA 90 bp | ATAATTGATCTTCTGCTCTACTTTGTAAGGAAAACAGCTTGGAGACATTTTGGTGTACAACACAAAGACTaGAGTGGTGAGAAACTAACA | + |
|
Preference number: 2 (lower is better) Translates to: IIDLLLYFVRKTAWRHFGVQHKD*SGEKLT Trigger: TGTTAGTTTCTCACCACTTCAGTCTTTGTGTTGTAC...ACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAGAGCAGAAGATCAATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGTTTCACTGGGTGGGTTaGGTGGCACATGTCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEFHWVG*VAHVSP Trigger: AGGGCTGACATGTGCCACCAAACCCACCCAGTGAAA...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR TCA 72 bp | GCGCCACGAGGATGGGCTGTCGGTAATTGGCATCCGTaGAGAGCTGGATCACGGAGACCTTCTGCTCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: APRGWAVGNWHP*RAGSRRPSAQS Trigger: CGACTGAGCAGAAGGTCTCCGTGATCCAGCTCTTCACGGATGCCAATTACCGACAGCCCATCCTCGTGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGAATCGCGTGTCAGGAGCCCACTaGGTGTTTCCAGAGAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: GGMCLCLPTPRRQRQENRVSGAH*VFPERL Trigger: TAATCTCTCTGGAAACACCAAGTGGGCTCCTGACAC...GCGATTCTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR GCA 72 bp | GCACTAGAAAGGGTCAAACAGGGTGGCATGTGCCTATaGCTCCCCACACCTCGGAGGCAGAGGCAGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALERVKQGGMCL*LPTPRRQRQEN Trigger: ATTCTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTTGACCCTTTCTAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR CCA 72 bp | CGCCAGGAATTCCATTTGTACAGCAGCTTTGCGTGGTaGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RQEFHLYSSFAW*GRTTLLPEFCS Trigger: GCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTTTGCGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGCGATTTCCGTAGGACGGGGTCCTaGGCTGAAAAATTCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFAWWGRTTLLPEFCSDFRRTGS*AEKFSN Trigger: GTTGCTGAATTTTTCAGCCAAGGACCCCGTCCTACG...GAAATCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR CCA 72 bp | AGACGCCAGGAATTCCATTTGTACAGCAGCTTTGCGTaGTGGGGCCGAACCACTCTTCTTCCGGAATTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RRQEFHLYSSFA*WGRTTLLPEFC Trigger: GCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTGCGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGCGATTTCAGGGCGATGACAAAATaGCAGACCCAGTTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFAWWGRTTLLPEFCSDFRAMTK*QTQLLK Trigger: CTTCAGCAACTGGGTCTGCAATTTTGTCATCGCCCT...GAAATCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR TCA 72 bp | GGAAGCACCACTCCATCCAAGGCCTTGAGCATCTGTTaGTCTTGCTGTGTGCAGTGGGGAATGAGGAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSTTPSKALSIC*SCCVQWGMRND Trigger: GTCATTCCTCATTCCCCACTGCACACAGCAAGATCAACAGATGCTCAAGGCCTTGGATGGAGTGGTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR GCA 72 bp | CTGAAGACGCCAGGAATTCCATTTGTACAGCAGCTTTaGGTGGTGGGGCCGAACCACTCTTCTTCCGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LKTPGIPFVQQL*VVGPNHSSSGI Trigger: AATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR TCA 72 bp | CTGTTGATCTTGCTGTGTGCAGTGGGGAATGAGGAATaGCCATCTCAGCCAGGAGCACGATGTAGGCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: LLILLCAVGNEE*PSQPGARCRLL Trigger: AAGTAGCCTACATCGTGCTCCTGGCTGAGATGGTCATTCCTCATTCCCCACTGCACACAGCAAGATCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR TCA 72 bp | TTGACTATGGAGGAAGCACCACTCCATCCAAGGCCTTaGGCATCTGTTGATCTTGCTGTGTGCAGTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTMEEAPLHPRP*ASVDLAVCSGE Trigger: TTCCCCACTGCACACAGCAAGATCAACAGATGCTCAAGGCCTTGGATGGAGTGGTGCTTCCTCCATAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR GCA 72 bp | GCGTGGTGGGGCCGAACCACTCTTCTTCCGGAATTCTaGAGCGATTTCCTCAAAAGACTTTCCTTTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: AWWGRTTLLPEF*SDFLKRLSFGF Trigger: GAAACCAAAGGAAAGTCTTTTGAGGAAATCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR TCA 72 bp | AGGCGAATTTATCCAGCAGCACAAGTCCCACCGACATaGAGATGGTGCAGAAAAACATGCCAATCATCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: RRIYPAAQVPPT*RWCRKTCQSSR Trigger: CCGGGATGATTGGCATGTTTTTCTGCACCATCTTCATGTCGGTGGGACTTGTGCTGCTGGATAAATTCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR TCA 72 bp | ACAGCAAGTTACAAATTACTAAAAACTCCAGCAGAGTaGTCAATGTGGCGGCCAGCAGACTCTCCTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TASYKLLKTPAE*SMWRPADSPPC Trigger: ACAAGGAGGAGAGTCTGCTGGCCGCCACATTGATCACTCTGCTGGAGTTTTTAGTAATTTGTAACTTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR CCA 72 bp | GATAAGCAGCAGACCTGTGTGTCCTTAACTGTAATTTaGGACAGTAGTGTCATTTGCCTGCACAGATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DKQQTCVSLTVI*DSSVICLHRSV Trigger: CACTGATCTGTGCAGGCAAATGACACTACTGTCCCAAATTACAGTTAAGGACACACAGGTCTGCTGCTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR TCA 72 bp | TCAAGAGCCCAGCCTAGGATGCATGACACCCTGACTTaGACCCCTACTCCAAATGACAAAATTAAGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: SRAQPRMHDTLT*TPTPNDKIKHF Trigger: AAAATGCTTAATTTTGTCATTTGGAGTAGGGGTTCAAGTCAGGGTGTCATGCATCCTAGGCTGGGCTCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR CCA 72 bp | GCTCTACTTTGTAAGGAAAACAGCTTGGAGACATTTTaGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALLCKENSLETF*LPDKQQTCVSL Trigger: TAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR-3UTR CAA 90 bp | ACTGACAAAGAGGAAGATGGCAGTCATGCTCACGTAACTCATCCAGGCGAATTTATCTCATTAATATCTTaGGTGACATCCTCAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TDKEEDGSHAHVTHPGEFISLIS*VTSSVP Trigger: AGGAACTGAGGATGTCACCAAAGATATTAATGAGAT...AAATTCGCCTGGATGAGTTACGTGAGCATGACTGCCATCTTCCTCTTTGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTAAAAAGCAGCGATATGTaGAAAGCTCTTCAATTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HRELLIDTNGSASSERVLKSSDM*KALQFQ Trigger: CTGAAATTGAAGAGCTTTCAACATATCGCTGCTTTT...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR TCA 72 bp | ATATTTCTAATCGGAGTCTGTAAAAATTCTTCCAAATaGATAAACGATACTCCTGGGTGTAGTCGCACACCG | + |
|
Preference number: 3 (lower is better) Translates to: IFLIGVCKNSSK*INDTPGCSRTP Trigger: CGGTGTGCGACTACACCCAGGAGTATCGTTTATTCATTTGGAAGAATTTTTACAGACTCCGATTAGAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR TCA 72 bp | TCTGCCCATCCATATATCCATCCATCCATCCATGCATaGATAATTGATCTTCTGCTCTACTTTGTAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SAHPYIHPSIHA*IIDLLLYFVRK Trigger: TTTCCTTACAAAGTAGAGCAGAAGATCAATTATTCATGCATGGATGGATGGATGGATATATGGATGGGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR TCA 72 bp | TTAATATTTCTTCAGCAAACACAGAGAGCTGCTCATTaGTACCAATGGTTCTGCATCCTCAGAGAGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LIFLQQTQRAAH*YQWFCILRESF Trigger: AAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTTTGCTGAAGAAATATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR GCA 72 bp | TTTTTCTTTAATATTTCTTCAGCAAACACAGAGAGCTaGTCATTGATACCAATGGTTCTGCATCCTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FFFNISSANTES*SLIPMVLHPQR Trigger: TCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTTTGCTGAAGAAATATTAAAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR GCA 90 bp | GAACCAGGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTTGGTGTTTCCACAGGGTCCGCCGCCCTaGCTTCTCCACAAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EPGESGGCDVSGAHLVFPQGPPP*LLHKQH Trigger: GTGCTGCTTGTGGAGAAGGCAGGGCGGCGGACCCTG...TGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACCTGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR TCA 90 bp | GACGCCAGGAATTCCATTTGTACAGCAGCTTTGCGTGGTGGGGCCGAACCACTCACAAGGGCCAGTTGGTaGAGAGTACCCAGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: DARNSICTAALRGGAEPLTRASW*RVPRAP Trigger: GGGTGCCCTGGGTACTCTTCACCAACTGGCCCTTGT...GAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR CAA 72 bp | CTGGGTGGGTTTGGTGGCACATGTCAGCCCTGGCCCTaGGAAGATCAGTGTAGGAGTTCAAGAGCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGFGGTCQPWP*EDQCRSSRAQP Trigger: AGGCTGGGCTCTTGAACTCCTACACTGATCTTCCAAGGGCCAGGGCTGACATGTGCCACCAAACCCACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CAA 72 bp | TGGAAGCAGAGGGCGATGACAAAATTGCAGACCCAGTaGCTGAAGGCAGCCAGTGCCAGAGCCGTAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: WKQRAMTKLQTQ*LKAASARAVGR Trigger: CCGTCCTACGGCTCTGGCACTGGCTGCCTTCAGCAACTGGGTCTGCAATTTTGTCATCGCCCTCTGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| 3UTR CAA 72 bp | GGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTaGGTGTTTCCAGAGAGATTAAAGAGGAGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GESGGCDVSGAH*VFPERLKRRLG Trigger: CCCAAGCCTCCTCTTTAATCTCTCTGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR TCA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGGATATTATTACCTCTTaGGGTGCATTGATCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEDIITS*GALITP Trigger: CGGTGTGATCAATGCACCTCAAGAGGTAATAATATC...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR GCA 90 bp | GAACCAGGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTTGGTGTTTCCAGGAAGATGGCAGTCATaGTCACGTAACTCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPGESGGCDVSGAHLVFPGRWQS*SRNSSR Trigger: CCTGGATGAGTTACGTGAGCATGACTGCCATCTTCC...TGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR TCA 90 bp | ATCATCCCGGTTAGGAACAGGGTCCGCCGCCCTGCCTTCTCCACAAGCAGCACAGATATTATTACCTCTTaGGGTGCATTGATCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: IIPVRNRVRRPAFSTSSTDIITS*GALITP Trigger: CGGTGTGATCAATGCACCTCAAGAGGTAATAATATC...TGTGCTGCTTGTGGAGAAGGCAGGGCGGCGGACCCTGTTCCTAACCGGGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| CDS-3UTR CCA 90 bp | GAACCAGGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTTGGTGTTTCCATTTCCGGTCATCCAGTaGAACACCCAAAACATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EPGESGGCDVSGAHLVFPFPVIQ*NTQNMS Trigger: CGACATGTTTTGGGTGTTCCACTGGATGACCGGAAA...TGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACCTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| 3UTR CAA 72 bp | TCCACAAGCAGCACAGAGACAGCCGTGAAGATCATGTaGATGGCCCCAACACCAATGGTTGCATACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STSSTETAVKIM*MAPTPMVAYTG Trigger: GCCTGTGTATGCAACCATTGGTGTTGGGGCCATCAACATGATCTTCACGGCTGTCTCTGTGCTGCTTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR CAA 72 bp | TCTGAAGACGCCAGGAATTCCATTTGTACAGCAGCTTaGCGTGGTGGGGCCGAACCACTCTTCTTCCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEDARNSICTAA*RGGAEPLFFRN Trigger: ATTCCGGAAGAAGAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTCTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGCCGAACCACTCTTCTTCCGGAATTCTGCAGCGATTTCCTCAAAAGACTCCTCTTGAGGTGCATTaGTCACACCGATGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPNHSSSGILQRFPQKTPLEVH*SHRCHS Trigger: GCTATGACATCGGTGTGATCAATGCACCTCAAGAGG...AGTCTTTTGAGGAAATCGCTGCAGAATTCCGGAAGAAGAGTGGTTCGGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| CDS-3UTR TCA 90 bp | AACACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTACAAGGGCCAGTTGGTaGAGAGTACCCAGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: NTESCSLIPMVLHPQREFTRASW*RVPRAP Trigger: GGGTGCCCTGGGTACTCTTCACCAACTGGCCCTTGT...AAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAACATGCCAATCATCCCGGTTAGGAACAGGGTCCGCCGCCCTGCCTTCTATTACCTCTTGAGGTaGATTGATCACACCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKNMPIIPVRNRVRRPAFYYLLR*IDHTDV Trigger: GACATCGGTGTGATCAATGCACCTCAAGAGGTAATA...GAAGGCAGGGCGGCGGACCCTGTTCCTAACCGGGATGATTGGCATGTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| CDS-3UTR GCA 90 bp | GAACCAGGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTTGGTGTTTCCACTTCTGCTCAGTCGATaGCTCTTCCTTTTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPGESGGCDVSGAHLVFPLLLSR*LFLFFL Trigger: AAGAAAGAAAAGGAAGAGGCATCGACTGAGCAGAAG...TGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACCTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR CCA 90 bp | CATTTGCCTGCACAGATCAGTGCCAGCAAGAGATTCCATAGGACCTGTGCATACATTCCTGAGAACTGCTaGGCCATGTGCAGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPAQISASKRFHRTCAYIPENC*AMCSIS Trigger: GCTGATGCTGCACATGGCCCAGCAGTTCTCAGGAAT...GTATGCACAGGTCCTATGGAATCTCTTGCTGGCACTGATCTGTGCAGGCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACAACTGCTGGGCCATGTaGAGCATCAGCGCCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNNCWAM*SISATR Trigger: CCTCGTGGCGCTGATGCTGCACATGGCCCAGCAGTT...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGAGACATTTTGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTTCAGCGCCACGAGGATaGGCTGTCGGTAATTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLETFWLPDKQQTCVSLTSAPRG*AVGNWH Trigger: ATGCCAATTACCGACAGCCCATCCTCGTGGCGCTGA...AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR CCA 90 bp | CATTTGCCTGCACAGATCAGTGCCAGCAAGAGATTCCATAGGACCTGTGCATACAAGTCCGCAATGTACTaGAAGCAGAGGGCGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLPAQISASKRFHRTCAYKSAMY*KQRAMT Trigger: TGTCATCGCCCTCTGCTTCCAGTACATTGCGGACTT...GTATGCACAGGTCCTATGGAATCTCTTGCTGGCACTGATCTGTGCAGGCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CCA 90 bp | CAGCAGCACAAGTCCCACCGACATGAAGATGGTGCAGAAAAACATGCCAATCATTTCATCCCAGGGAGCTaGTGTTGTGTATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQHKSHRHEDGAEKHANHFIPGS*CCVCWC Trigger: ACACCAGCATACACAACACCAGCTCCCTGGGATGAA...ATGATTGGCATGTTTTTCTGCACCATCTTCATGTCGGTGGGACTTGTGCTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| 3UTR CAA 72 bp | CATGCGTGGATCTCGAGTCCCCTTGTCCACCTTAACTaGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HAWISSPLVHLN*LLDCKIPKVCV Trigger: CACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAGGGGACTCGAGATCCACGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CCA 90 bp | AGCTTGGAGACATTTTGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTGTGCCGGTCCAAATTTaGAACATCCCATCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLETFWLPDKQQTCVSLTVPVQI*NIPSRG Trigger: CCCTCTTGATGGGATGTTCCAAATTTGGACCGGCAC...AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR TCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACCCTCTTGAGGTGCATTaGTCACACCGATGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNPLEVH*SHRCHS Trigger: GCTATGACATCGGTGTGATCAATGCACCTCAAGAGG...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR TCA 90 bp | AACACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTCAGCCAACATTGCTTTaGTCCTTCCAAGTTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTESCSLIPMVLHPQREFQPTLL*SFQVCP Trigger: GGGACAAACTTGGAAGGATCAAAGCAATGTTGGCTG...AAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR TCA 90 bp | AAGTTTCGGTACCAGTATCATTTGCTGGAAACTGAACTTCCTAGAAACTGTCAGGGAAGCAGAGGGCGATaGCAAAATTGCAGACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KFRYQYHLLETELPRNCQGSRGR*QNCRPS Trigger: ACTGGGTCTGCAATTTTGTCATCGCCCTCTGCTTCC...CTGACAGTTTCTAGGAAGTTCAGTTTCCAGCAAATGATACTGGTACCGAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGACTTCCTCTTCCAACTTTATATAAAGGTATCTGGGGCTTTCTGGACAAGCTGGTGTTGTGTATaGTGGTGTGACTGTAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPDFLFQLYIKVSGAFWTSWCCV*WCDCKW Trigger: CCACTTACAGTCACACCAGCATACACAACACCAGCT...TGTCCAGAAAGCCCCAGATACCTTTATATAAAGTTGGAAGAGGAAGTCAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGACTTCCTCTTCCAACTTTATATAAAGGTATCTGGGGCTTTCTGGACATTTCCGGTCATCCAGTaGAACACCCAAAACATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CPDFLFQLYIKVSGAFWTFPVIQ*NTQNMS Trigger: CGACATGTTTTGGGTGTTCCACTGGATGACCGGAAA...TGTCCAGAAAGCCCCAGATACCTTTATATAAAGTTGGAAGAGGAAGTCAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACTTCATCCCAGGGAGCTaGTGTTGTGTATGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNFIPGS*CCVCWC Trigger: ACACCAGCATACACAACACCAGCTCCCTGGGATGAA...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACAGCTGGTGTTGTGTATaGTGGTGTGACTGTAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNSWCCV*WCDCKW Trigger: CCACTTACAGTCACACCAGCATACACAACACCAGCT...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGAGACATTTTGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTCTTCAAGCTTTTCTTTaGCCTGACTTCCTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLETFWLPDKQQTCVSLTLQAFL*PDFLFQ Trigger: TTGGAAGAGGAAGTCAGGGCAAAGAAAAGCTTGAAG...AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR TCA 90 bp | AACACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTAGTAAAATATCCCATTaGTTCCTGAGAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTESCSLIPMVLHPQREFSKISH*FLRTAG Trigger: CCCAGCAGTTCTCAGGAATCAATGGGATATTTTACT...AAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | ATAATTGATCTTCTGCTCTACTTTGTAAGGAAAACAGCTTGGAGACATTTTGGTTTTGTACAGCAGCTTTaGGTGGTGGGGCCGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIDLLLYFVRKTAWRHFGFVQQL*VVGPNH Trigger: GTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAA...ACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAGAGCAGAAGATCAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR CAA 72 bp | CTACTTTGTAAGGAAAACAGCTTGGAGACATTTTGGTaGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLCKENSLETFW*PDKQQTCVSLT Trigger: AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCACCTTAACTTGCTGTTAGACTGTAAGATCCCTAAAGTGTGTGTGAACTATTACCTCTTGAGGTaGATTGATCACACCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVHLNLLLDCKIPKVCVNYYLLR*IDHTDV Trigger: GACATCGGTGTGATCAATGCACCTCAAGAGGTAATA...GTTCACACACACTTTAGGGATCTTACAGTCTAACAGCAAGTTAAGGTGGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR GCA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTAGTTTGCAGCCAACATTaGTTTGATCCTTCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRELLIDTNGSASSERVLVCSQH*FDPSKF Trigger: AAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAAC...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR GCA 90 bp | ATAATTGATCTTCTGCTCTACTTTGTAAGGAAAACAGCTTGGAGACATTTTGGTAGCAGTAGCAGACACTaGAGAAGAGCTGGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIDLLLYFVRKTAWRHFGSSSRH*RRAGTA Trigger: TGCTGTGCCAGCTCTTCTGCAGTGTCTGCTACTGCT...ACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAGAGCAGAAGATCAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS-3UTR TCA 90 bp | ATAATTGATCTTCTGCTCTACTTTGTAAGGAAAACAGCTTGGAGACATTTTGGTCATACACAGGCTGGCTaGTGCCAGCTGTCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIDLLLYFVRKTAWRHFGHTQAG*CQLSEK Trigger: TTTTTCAGACAGCTGGCATCAGCCAGCCTGTGTATG...ACCAAAATGTCTCCAAGCTGTTTTCCTTACAAAGTAGAGCAGAAGATCAATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CCA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTATTATATAAAGGTATCTaGGGCTTTCTGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRELLIDTNGSASSERVLLYKGI*GFLDRR Trigger: TCTTCTGTCCAGAAAGCCCCAGATACCTTTATATAA...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| 3UTR CAA 72 bp | AGTACATGTGTCTTACACTCTATGCACTATCTCTATTaGGGACACTGGAAGCACAGATATTACCTAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: STCVLHSMHYLY*GHWKHRYYLTF Trigger: AAATGTTAGGTAATATCTGTGCTTCCAGTGTCCCAAATAGAGATAGTGCATAGAGTGTAAGACACATGTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGAAATTGCAGACCCAGTaGCTGAAGGCAGCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQGGMCLCLPTPRRQRQEKLQTQ*LKAASA Trigger: GGCACTGGCTGCCTTCAGCAACTGGGTCTGCAATTT...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | GGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGAATCGCCGCCAGGAATTCCATTaGTACAGCAGCTTTGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGMCLCLPTPRRQRQENRRQEFH*YSSFAW Trigger: CCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCG...GCGATTCTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGCGTAGGACGGGGTCCTaGGCTGAAAAATTCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KQGGMCLCLPTPRRQRQERRTGS*AEKFSN Trigger: GTTGCTGAATTTTTCAGCCAAGGACCCCGTCCTACG...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | GACGCCAGGAATTCCATTTGTACAGCAGCTTTGCGTGGTGGGGCCGAACCACTCTTAGCCCTTCCAAGTTaGTCCCCGAGCCACCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DARNSICTAALRGGAEPLLALPS*SPSHPP Trigger: TGGTGGGTGGCTCGGGGACAAACTTGGAAGGGCTAA...GAGTGGTTCGGCCCCACCACGCAAAGCTGCTGTACAAATGGAATTCCTGGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| CDS TCA 90 bp | TGCTTTGATCCTTCCAAGTTTGTCCCCGAGCCACCCACCAAAGAATaGGGCGACCATTCCGCCCACTGCAAAGCTGGACACAGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CFDPSKFVPEPPTKE*GDHSAHCKAGHRQR Trigger: TCTCTGTCTGTGTCCAGCTTTGCAGTGGGCGGAATGGTCGCCTCATTCTTTGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS TCA 90 bp | GAAATTAGCCCTTCCAAGTTTGTCCCCGAGCCACCCACCAAAGAATaGGGCGACCATTCCGCCCACTGCAAAGCTGGACACAGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EISPSKFVPEPPTKE*GDHSAHCKAGHRQR Trigger: TCTCTGTCTGTGTCCAGCTTTGCAGTGGGCGGAATGGTCGCCTCATTCTTTGGTGGGTGGCTCGGGGACAAACTTGGAAGGGCTAATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTGGCATGTGCCTATGCCTCCCCACACCTCGGAGGCAGAGGCAGGAGTCTCTCCAATGTACATaGGAACCAGTCCTGAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: KQGGMCLCLPTPRRQRQESLQCT*EPVLKL Trigger: TAATTTCAGGACTGGTTCCAATGTACATTGGAGAGA...CTCCTGCCTCTGCCTCCGAGGTGTGGGGAGGCATAGGCACATGCCACCCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS TCA 90 bp | AGAGGGCTCCAGTCAATGAGAGGCTGTTTGCAGCCAACATTGCTTTaGTCCTTCCAAGTTTGTCCCCGAGCCACCCACCAAAGAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLQSMRGCLQPTLL*SFQVCPRATHQRMR Trigger: CCTCATTCTTTGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATTGACTGGAGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS GCA 90 bp | AGATCCTTCAGTCTCCTCTTCATCCCAGGGAGCTGGTGTTGTGTATaGTGGTGTGACTGTAAGTGGGGTGTCTGTGCCATTGACGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: RSFSLLFIPGSWCCV*WCDCKWGVCAIDVI Trigger: TATGACGTCAATGGCACAGACACCCCACTTACAGTCACACCAGCATACACAACACCAGCTCCCTGGGATGAAGAGGAGACTGAAGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029240.14 ENSMUST00000163536.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCTCCACAAGCAGCACAGAGACAGCCGTGAAGATCATGTTGATGGCCCCGGATATTATTACCTCTaGAGGTGCATTGATCACACC | + |
|
Preference number: 5 (lower is better) Translates to: CLLHKQHRDSREDHVDGPGYYYL*RCIDHT Trigger: GGTGTGATCAATGCACCTCAAGAGGTAATAATATCC...GGGGCCATCAACATGATCTTCACGGCTGTCTCTGTGCTGCTTGTGGAGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| CDS-3UTR CAA 90 bp | CACAGAGAGCTGCTCATTGATACCAATGGTTCTGCATCCTCAGAGAGAGTTTTATTGATCCTTCCAAGTTaGTCCCCGAGCCACCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: HRELLIDTNGSASSERVLLILPS*SPSHPP Trigger: TGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAA...TAAAACTCTCTCTGAGGATGCAGAACCATTGGTATCAATGAGCAGCTCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | TGCCTTCTCCACAAGCAGCACAGAGACAGCCGTGAAGATCATGTTGATGGCCCCTCTCTCCAATGTACATaGGAACCAGTCCTGAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: CLLHKQHRDSREDHVDGPSLQCT*EPVLKL Trigger: TAATTTCAGGACTGGTTCCAATGTACATTGGAGAGA...GGGGCCATCAACATGATCTTCACGGCTGTCTCTGTGCTGCTTGTGGAGAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163536.8 |
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| CDS-3UTR CAA 90 bp | GAACCAGGTGAGAGTGGTGGCTGTGACGTGTCAGGAGCCCACTTGGTGTTTCCAATCTCATTAATATCTTaGGTGACATCCTCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EPGESGGCDVSGAHLVFPISLIS*VTSSVP Trigger: AGGAACTGAGGATGTCACCAAAGATATTAATGAGAT...TGGAAACACCAAGTGGGCTCCTGACACGTCACAGCCACCACTCTCACCTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS TCA 90 bp | TGCCGGTCCAAATTTGGAACATCCCATCAAGAGGGCTCCAGTCAATaGGAGGCTGTTTGCAGCCAACATTGCTTTGATCCTTCCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CRSKFGTSHQEGSSQ*EAVCSQHCFDPSKF Trigger: AAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATTGACTGGAGCCCTCTTGATGGGATGTTCCAAATTTGGACCGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | AGCTTGGAGACATTTTGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTAGGGCGATGACAAAATaGCAGACCCAGTTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLETFWLPDKQQTCVSLTRAMTK*QTQLLK Trigger: CTTCAGCAACTGGGTCTGCAATTTTGTCATCGCCCT...AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS-3UTR CAA 90 bp | AGCTTGGAGACATTTTGGTTGCCTGATAAGCAGCAGACCTGTGTGTCCTTAACTGGATATTATTACCTCTaGAGGTGCATTGATCACACC | + |
|
Preference number: 5 (lower is better) Translates to: SLETFWLPDKQQTCVSLTGYYYL*RCIDHT Trigger: GGTGTGATCAATGCACCTCAAGAGGTAATAATATCC...AGTTAAGGACACACAGGTCTGCTGCTTATCAGGCAACCAAAATGTCTCCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS CCA 90 bp | TGTGCCATTGACGTCATAGTTAATGGCAGCTTTCCGGTCATCCAGTaGAACACCCAAAACATGTCGATAATGGGATATTATTACCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAIDVIVNGSFPVIQ*NTQNMSIMGYYYLL Trigger: CAAGAGGTAATAATATCCCATTATCGACATGTTTTGGGTGTTCCACTGGATGACCGGAAAGCTGCCATTAACTATGACGTCAATGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029240.14 ENSMUST00000163536.8 |
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| CDS TCA 72 bp | CCTTCCAAGTTTGTCCCCGAGCCACCCACCAAAGAATaGGGCGACCATTCCGCCCACTGCAAAGCTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PSKFVPEPPTKE*GDHSAHCKAGH Trigger: GTGTCCAGCTTTGCAGTGGGCGGAATGGTCGCCTCATTCTTTGGTGGGTGGCTCGGGGACAAACTTGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029240.14 ENSMUST00000163536.8 |
||
| CDS CAA 90 bp | GAGGCCAGCAATCTGACTAATAAGAATGCCTGTGACAAGGGCCAGTaGGTGAAGAGTACCCAGGGCACCCCTGAGTGTGGTTGGAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: EASNLTNKNACDKGQ*VKSTQGTPECGWSD Trigger: ATCGCTCCAACCACACTCAGGGGTGCCCTGGGTACTCTTCACCAACTGGCCCTTGTCACAGGCATTCTTATTAGTCAGATTGCTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS CAA 72 bp | CGTCCAGCAATGATGAGGGCGTGTGCCGGTCCAAATTaGGAACATCCCATCAAGAGGGCTCCAGTCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPAMMRACAGPN*EHPIKRAPVNE Trigger: CTCATTGACTGGAGCCCTCTTGATGGGATGTTCCAAATTTGGACCGGCACACGCCCTCATCATTGCTGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS CAA 90 bp | AATGAGAGGCTGTTTGCAGCCAACATTGCTTTGATCCTTCCAAGTTaGTCCCCGAGCCACCCACCAAAGAATGAGGCGACCATTCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: NERLFAANIALILPS*SPSHPPKNEATIPP Trigger: GGGCGGAATGGTCGCCTCATTCTTTGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS CCA 72 bp | AGCAGATCCTTCAGTCTCCTCTTCATCCCAGGGAGCTaGTGTTGTGTATGCTGGTGTGACTGTAAGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRSFSLLFIPGS*CCVCWCDCKWG Trigger: ACCCCACTTACAGTCACACCAGCATACACAACACCAGCTCCCTGGGATGAAGAGGAGACTGAAGGATCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029240.14 ENSMUST00000163536.8 |
||
| CDS CAA 72 bp | CCAGTCAATGAGAGGCTGTTTGCAGCCAACATTGCTTaGATCCTTCCAAGTTTGTCCCCGAGCCACCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PVNERLFAANIA*ILPSLSPSHPP Trigger: TGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATTGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS CAA 90 bp | AAGAGGGCTCCAGTCAATGAGAGGCTGTTTGCAGCCAACATTGCTTaGATCCTTCCAAGTTTGTCCCCGAGCCACCCACCAAAGAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: KRAPVNERLFAANIA*ILPSLSPSHPPKNE Trigger: CTCATTCTTTGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATTGACTGGAGCCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS CAA 90 bp | GATACACTTCGTCCAGCAATGATGAGGGCGTGTGCCGGTCCAAATTaGGAACATCCCATCAAGAGGGCTCCAGTCAATGAGAGGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: DTLRPAMMRACAGPN*EHPIKRAPVNERLF Trigger: AAACAGCCTCTCATTGACTGGAGCCCTCTTGATGGGATGTTCCAAATTTGGACCGGCACACGCCCTCATCATTGCTGGACGAAGTGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
||
| CDS TCA 72 bp | CAGTCAATGAGAGGCTGTTTGCAGCCAACATTGCTTTaGTCCTTCCAAGTTTGTCCCCGAGCCACCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: QSMRGCLQPTLL*SFQVCPRATHQ Trigger: TTGGTGGGTGGCTCGGGGACAAACTTGGAAGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS CAA 72 bp | AATCTGACTAATAAGAATGCCTGTGACAAGGGCCAGTaGGTGAAGAGTACCCAGGGCACCCCTGAGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: NLTNKNACDKGQ*VKSTQGTPECG Trigger: ACCACACTCAGGGGTGCCCTGGGTACTCTTCACCAACTGGCCCTTGTCACAGGCATTCTTATTAGTCAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS TCA 72 bp | AAATTTGGAACATCCCATCAAGAGGGCTCCAGTCAATaGGAGGCTGTTTGCAGCCAACATTGCTTTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: KFGTSHQEGSSQ*EAVCSQHCFDP Trigger: AGGATCAAAGCAATGTTGGCTGCAAACAGCCTCTCATTGACTGGAGCCCTCTTGATGGGATGTTCCAAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029240.14 |
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| CDS CCA 72 bp | GACGTCATAGTTAATGGCAGCTTTCCGGTCATCCAGTaGAACACCCAAAACATGTCGATAATGGGATATTAT | + |
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Preference number: 6 (lower is better) Translates to: DVIVNGSFPVIQ*NTQNMSIMGYY Trigger: ATAATATCCCATTATCGACATGTTTTGGGTGTTCCACTGGATGACCGGAAAGCTGCCATTAACTATGACGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029240.14 ENSMUST00000163536.8 |
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