Pregenerated sensors for SLC2A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036298Ensembl transcript IDs: ENSMUST00000109283.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCGGGAGCCAGGGCGTGACAACGAAGAGAGTCTGGTGTGGAACTaGCCCTGGGATACAGCTGACCGCCTGGCACTGCGTCACGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: QREPGRDNEESLVWN*PWDTADRLALRHVY Trigger: GTAAACGTGACGCAGTGCCAGGCGGTCAGCTGTATCCCAGGGTCAGTTCCACACCAGACTCTCTTCGTTGTCACGCCCTGGCTCCCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR TCA 90 bp | CTGGTTGTGGTTTCCCAAGGAGGCAGCACTACTTGGAGAACTGAATaGCCCTGGCTGTGCACGAGGCCAGGATTGGTAGAGATTTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: LVVVSQGGSTTWRTE*PWLCTRPGLVEISR Trigger: CCTAGAAATCTCTACCAATCCTGGCCTCGTGCACAGCCAGGGTCATTCAGTTCTCCAAGTAGTGCTGCCTCCTTGGGAAACCACAACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 90 bp | AAGATGCTGTATACTCAGCCTCCGAGGGAATTTCCATATCTGTGTTaGAGAAGCCAACCTCTGGAACCCGAAGGCAAGAGGGACAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: KMLYTQPPREFPYLC*RSQPLEPEGKRDSC Trigger: ACAGCTGTCCCTCTTGCCTTCGGGTTCCAGAGGTTGGCTTCTCCAACACAGATATGGAAATTCCCTCGGAGGCTGAGTATACAGCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 90 bp | TCTCTAAACTGCATACAAGGAAGAGTTGAGCAGGTAGCTAGCTGTTaGCATTTGCAGCTGGTTGTGGTTTCCCAAGGAGGCAGCACTACT | + |
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Preference number: 1 (lower is better) Translates to: SLNCIQGRVEQVASC*HLQLVVVSQGGSTT Trigger: AGTAGTGCTGCCTCCTTGGGAAACCACAACCAGCTGCAAATGCCAACAGCTAGCTACCTGCTCAACTCTTCCTTGTATGCAGTTTAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 90 bp | CAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGGATTaGATTTGGGACACGTTTCGAAAGAAGCCTATTACTGCAGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: QDLLHPMFPKERHLD*IWDTFRKKPITAVA Trigger: TGCCACTGCAGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 90 bp | CTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGGATTGGATTTaGGACACGTTTCGAAAGAAGCCTATTACTGCAGTGGCAAGTACA | + |
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Preference number: 1 (lower is better) Translates to: LLHPMFPKERHLDWI*DTFRKKPITAVAST Trigger: TGTACTTGCCACTGCAGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 90 bp | CTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTaGATTGGATTTGGGACACGTTTCGAAAGAAGCCTATTACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LFRIFFTQCSQRKDT*IGFGTRFERSLLLQ Trigger: CTGCAGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR GCA 90 bp | AAGATCACAACATCAAGTCTTTTTGACATCATTTCCAGCCGTATGTaGTTACATGCATACAAAATTATGCATTCTTCATTCTCCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: KITTSSLFDIISSRM*LHAYKIMHSSFSCT Trigger: TGTGCAGGAGAATGAAGAATGCATAATTTTGTATGCATGTAAGCACATACGGCTGGAAATGATGTCAAAAAGACTTGATGTTGTGATCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGCCAGACTGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGCTCATCAAGTCTTCTaGAATATGGAGTCGTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: TLPDCRPVQDLLHPMFPKAHQVF*NMESFV Trigger: TACAAACGACTCCATATTCCAGAAGACTTGATGAGC...CTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCAGTCTGGCAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 90 bp | TCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGGATaGGATTTGGGACACGTTTCGAAAGAAGCCTATTACTGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SGSSSPNVPKGKTPG*DLGHVSKEAYYCSG Trigger: GCCACTGCAGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGCTGTAACACTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTTGACAGACAGGGATCCCAAGTaGAGTCACTGGGTACAACAG | + |
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Preference number: 2 (lower is better) Translates to: SAVTLNCLPRSQHQVFLTDRDPK*SHWVQQ Trigger: CTGTTGTACCCAGTGACTTCACTTGGGATCCCTGTC...TGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAGTGTTACAGCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 90 bp | TCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGGATTGGATTaGGGACACGTTTCGAAAGAAGCCTATTACTGCAGTGGCAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSSPNVPKGKTPGLD*GHVSKEAYYCSGKY Trigger: GTACTTGCCACTGCAGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGCAGGAAGGATGGGGATaGTTTCCCAATATTATGTTA | + |
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Preference number: 2 (lower is better) Translates to: CRPVQDLLHPMFPKERHLQEGWG*FPNIML Trigger: TAACATAATATTGGGAAATCATCCCCATCCTTCCTG...CAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCACGGTTGGATTTTTCTaGTCATCAAGTCTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TAGLFRIFFTQCSQRKDTTVGFF*SSSLLE Trigger: TTCCAGAAGACTTGATGAGCAGAAAAATCCAACCGT...GGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGGGATGGAAGTTTAGATaGCATTCACTTTGTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: CRPVQDLLHPMFPKERHLGWKFR*HSLCAD Trigger: ATCAGCACAAAGTGAATGCCATCTAAACTTCCATCC...CAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAGTACTGTAACATCAAGGGAGACACAGCACAGGGAGCCACCCGAGAATCTAGAAAAGCCACTACCTaGTATGAAAATTTAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KQYCNIKGDTAQGATRESRKATT*YENLGS Trigger: TGACCCTAAATTTTCATATCAGGTAGTGGCTTTTCT...AGATTCTCGGGTGGCTCCCTGTGCTGTGTCTCCCTTGATGTTACAGTACTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCACTTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTATGGGGAGACTCAGCTTaGGAGCAGGGCAGTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: FHLCSKLLRMRREHGVKVWGDSA*EQGSDQ Trigger: TTGGTCACTGCCCTGCTCGCAAGCTGAGTCTCCCCA...TACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAAGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAGTACTGTAACATCAAGGGAGACACAGCACAGGGAGCCACCCGAGAATCTCTGTTGAAAAGATTCTaGTGGTTTTACTCCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: KQYCNIKGDTAQGATRESLLKRF*WFYSCN Trigger: ATTACAGGAGTAAAACCACCAGAATCTTTTCAACAG...AGATTCTCGGGTGGCTCCCTGTGCTGTGTCTCCCTTGATGTTACAGTACTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCAATATAGGTGTAGCCAGCAAAATTATTACAGATGTCTATATGGAAGAGCATTCACTTTGTGCTaGTCAGAGAAAAGCCACTAC | + |
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Preference number: 2 (lower is better) Translates to: ADQYRCSQQNYYRCLYGRAFTLC*SEKSHY Trigger: GTAGTGGCTTTTCTCTGATCAGCACAAAGTGAATGC...TCTTCCATATAGACATCTGTAATAATTTTGCTGGCTACACCTATATTGGTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCAATATAGGTGTAGCCAGCAAAATTATTACAGATGTCTATATGGAAGATTAGGAACTCAGGGTTaGCTGAACAGAGAAACCATC | + |
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Preference number: 2 (lower is better) Translates to: ADQYRCSQQNYYRCLYGRLGTQG*LNRETI Trigger: GATGGTTTCTCTGTTCAGTCAACCCTGAGTTCCTAA...TCTTCCATATAGACATCTGTAATAATTTTGCTGGCTACACCTATATTGGTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR GCA 90 bp | AGCGCTGTAACACTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTTGACAATAATGTTCAAAAGATaGTGTATACTCAGCCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: SAVTLNCLPRSQHQVFLTIMFKR*CILSLR Trigger: TCGGAGGCTGAGTATACAGCATCTTTTGAACATTAT...TGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAGTGTTACAGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTAGCTCACTTTCCATATCTGTGTTaGAGAAGCCAACCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LCSKLLRMRREHGVKVAHFPYLC*RSQPLE Trigger: TTCCAGAGGTTGGCTTCTCCAACACAGATATGGAAA...GTGAGCTACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCATACAAAATTATGCATTCTTCATTCTCCTGCACATTAGCCACCCTGCCATATGTCTTTTTCCAATaGAGAAACCTCCATGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HAYKIMHSSFSCTLATLPYVFFQ*RNLHVS Trigger: AGAGACATGGAGGTTTCTCCATTGGAAAAAGACATA...TGGCAGGGTGGCTAATGTGCAGGAGAATGAAGAATGCATAATTTTGTATGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 90 bp | CTGCTTGATAGTTACAGTAAGAAAGAAGCAGCAAGAATAAACGTTTaGAAATTGGCAGAGATGCTTCATCTATCACTAGCCATCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: LLDSYSKKEAARINV*KLAEMLHLSLAITH Trigger: GTGAGTGATGGCTAGTGATAGATGAAGCATCTCTGCCAATTTCAAAACGTTTATTCTTGCTGCTTCTTTCTTACTGTAACTATCAAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR GCA 90 bp | AGCGCTGTAACACTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTTGACACCGTATGTGCTTACATaGATACAAAATTATGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SAVTLNCLPRSQHQVFLTPYVLT*IQNYAF Trigger: GAATGCATAATTTTGTATGCATGTAAGCACATACGG...TGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAGTGTTACAGCGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CCA 90 bp | AGCGCTGTAACACTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTTGACAAGCCTATTACTGCAGTaGCAAGTACACTTATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SAVTLNCLPRSQHQVFLTSLLLQ*QVHLFN Trigger: ATTAAATAAGTGTACTTGCCACTGCAGTAATAGGCT...TGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAGTGTTACAGCGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR TCA 72 bp | CCAGGGCGTGACAACGAAGAGAGTCTGGTGTGGAACTaGCCCTGGGATACAGCTGACCGCCTGGCACTGCGT | + |
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Preference number: 3 (lower is better) Translates to: PGRDNEESLVWN*PWDTADRLALR Trigger: ACGCAGTGCCAGGCGGTCAGCTGTATCCCAGGGTCAGTTCCACACCAGACTCTCTTCGTTGTCACGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR TCA 72 bp | CACCAAGGAAGGCACAGGACAGCGGGAGCCAGGGCGTaGCAACGAAGAGAGTCTGGTGTGGAACTGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: HQGRHRTAGARA*QRRESGVELTL Trigger: CAGGGTCAGTTCCACACCAGACTCTCTTCGTTGTCACGCCCTGGCTCCCGCTGTCCTGTGCCTTCCTTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR TCA 72 bp | AGAGAGTCTGGTGTGGAACTGACCCTGGGATACAGCTaGCCGCCTGGCACTGCGTCACGTTTACAGTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: RESGVELTLGYS*PPGTASRLQLH Trigger: ATGCAACTGTAAACGTGACGCAGTGCCAGGCGGTCAGCTGTATCCCAGGGTCAGTTCCACACCAGACTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR TCA 72 bp | TGTGGTTTCCCAAGGAGGCAGCACTACTTGGAGAACTaGATGACCCTGGCTGTGCACGAGGCCAGGATTGGT | + |
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Preference number: 3 (lower is better) Translates to: CGFPRRQHYLEN*MTLAVHEARIG Trigger: ACCAATCCTGGCCTCGTGCACAGCCAGGGTCATTCAGTTCTCCAAGTAGTGCTGCCTCCTTGGGAAACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 72 bp | GGGAATTTCCATATCTGTGTTGGAGAAGCCAACCTCTaGAACCCGAAGGCAAGAGGGACAGCTGTGTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GNFHICVGEANL*NPKARGTAVSS Trigger: TGAGGACACAGCTGTCCCTCTTGCCTTCGGGTTCCAGAGGTTGGCTTCTCCAACACAGATATGGAAATTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR GCA 72 bp | TCTTCATTCTCCTGCACATTAGCCACCCTGCCAGACTaGAGGCCTGTTCAGGATCTTCTTCACCCAATGTTC | + |
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Preference number: 3 (lower is better) Translates to: SSFSCTLATLPD*RPVQDLLHPMF Trigger: GAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCAGTCTGGCAGGGTGGCTAATGTGCAGGAGAATGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 72 bp | TATACTCAGCCTCCGAGGGAATTTCCATATCTGTGTTaGAGAAGCCAACCTCTGGAACCCGAAGGCAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: YTQPPREFPYLC*RSQPLEPEGKR Trigger: CCTCTTGCCTTCGGGTTCCAGAGGTTGGCTTCTCCAACACAGATATGGAAATTCCCTCGGAGGCTGAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR GCA 72 bp | TCCTCCTGTGTATCAGAAAGAGAGAGCCAGACAATCTaGCAGCAGCTGTCATTCAACACCAAGGAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: SSCVSERESQTI*QQLSFNTKEGT Trigger: TGTGCCTTCCTTGGTGTTGAATGACAGCTGCTGGCAGATTGTCTGGCTCTCTCTTTCTGATACACAGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR GCA 72 bp | AAGGTACCCTGTGCCAGCTCTGTTGAGATACCTGTGTaGTTAAGGCTATGTGGACCTCAAAGGGAAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: KVPCASSVEIPV*LRLCGPQREEL Trigger: CAGTTCTTCCCTTTGAGGTCCACATAGCCTTAAGCACACAGGTATCTCAACAGAGCTGGCACAGGGTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGATTTCCATATCTGTGTaGGAGAAGCCAACCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: CRPVQDLLHPMFPKERHLISISV*EKPTSG Trigger: TCCAGAGGTTGGCTTCTCCAACACAGATATGGAAAT...CAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 72 bp | CCAATGTTCCCAAAGGAAAGACACCTGGATTGGATTTaGGACACGTTTCGAAAGAAGCCTATTACTGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PMFPKERHLDWI*DTFRKKPITAV Trigger: CACTGCAGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 72 bp | CTTCACCCAATGTTCCCAAAGGAAAGACACCTGGATTaGATTTGGGACACGTTTCGAAAGAAGCCTATTACT | + |
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Preference number: 3 (lower is better) Translates to: LHPMFPKERHLD*IWDTFRKKPIT Trigger: AGTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CCA 72 bp | ATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTaGATTGGATTTGGGACACGTTTCGAAAGAAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: IFFTQCSQRKDT*IGFGTRFERSL Trigger: TAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR GCA 72 bp | CCCTTAAAAGGCCTGCTTTGGATAATGTTCAAAAGATaGTGTATACTCAGCCTCCGAGGGAATTTCCATATC | + |
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Preference number: 3 (lower is better) Translates to: PLKGLLWIMFKR*CILSLRGNFHI Trigger: GATATGGAAATTCCCTCGGAGGCTGAGTATACAGCATCTTTTGAACATTATCCAAAGCAGGCCTTTTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAAGGAAAGACACCTGGATaGGATTTGGGACACGTTTCG | + |
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Preference number: 3 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKGKTPG*DLGHVS Trigger: CGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCC...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CAA 90 bp | AGCGCTGTAACACTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTTGACAAAGCTGAGAATGTACTaGTTTTTATGTCAGCGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SAVTLNCLPRSQHQVFLTKLRMY*FLCQRE Trigger: TTCTCGCTGACATAAAAACAAGTACATTCTCAGCTT...TGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAGTGTTACAGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAAGTCCTCAGGGGGAAATaGCAAGTAATTAGAAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKVLRGK*QVIRSE Trigger: CTCACTTCTAATTACTTGCAATTTCCCCCTGAGGAC...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR TCA 72 bp | ATAAGACATCTGGAGGAAGAAGTCCTAGGGTTTAAATaGAATGTCAATAACATCTCTGCCACTGACTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: IRHLEEEVLGFK*NVNNISATDFF Trigger: AAAGAAGTCAGTGGCAGAGATGTTATTGACATTTCATTTAAACCCTAGGACTTCTTCCTCCAGATGTCTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAAGCAAGAATAAACGTTTaGAAATTGGCAGAGATGCTT | + |
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Preference number: 3 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKARINV*KLAEML Trigger: AAGCATCTCTGCCAATTTCAAAACGTTTATTCTTGC...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CCA 90 bp | ACCCTGCCAGACTGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGCGCCCAGGCGCATCTaGCGCCGCAGCAGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: TLPDCRPVQDLLHPMFPKAPRRI*RRSSSM Trigger: CATGCTGCTGCTGCGGCGCCAGATGCGCCTGGGCGC...CTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCAGTCTGGCAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | TGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGCGCGCTGGAACTGCCTaGGCGCCGCGCGCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CRPVQDLLHPMFPKERHLRAGTA*APRAPA Trigger: AGCTGGAGCGCGCGGCGCGCAGGCAGTTCCAGCGCG...CAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | TGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGAAAGACACCTGCGGCGGAGCCCACGGTaGACAGGGCGCTGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CRPVQDLLHPMFPKERHLRRSPR*TGRWPA Trigger: TGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCG...CAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CCA 90 bp | AAACAGTACTGTAACATCAAGGGAGACACAGCACAGGGAGCCACCCGAGAATCTGCAGCGTCTCCTTGTTaGCGGCGGCGGCCAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KQYCNIKGDTAQGATRESAASPC*RRRPAR Trigger: CCGTGCTGGCCGCCGCCGCCAACAAGGAGACGCTGC...AGATTCTCGGGTGGCTCCCTGTGCTGTGTCTCCCTTGATGTTACAGTACTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | CATGCATACAAAATTATGCATTCTTCATTCTCCTGCACATTAGCCACCCTGCCAGACACCAGCAGCTCCTaGCACATCGCGCCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HAYKIMHSSFSCTLATLPDTSSS*HIAPRR Trigger: GCGCCTGGGCGCGATGTGGCAGGAGCTGCTGGTGTC...TGGCAGGGTGGCTAATGTGCAGGAGAATGAAGAATGCATAATTTTGTATGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTAGCTCACGCCGCAGCAGCAGCATaGCCCCCGACACCACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSKLLRMRREHGVKVAHAAAAA*PPTPRR Trigger: CCGGCGTGGTGTCGGGGGCCATGCTGCTGCTGCGGC...GTGAGCTACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 72 bp | CAAGGAAGAGTTGAGCAGGTAGCTAGCTGTTGGCATTaGCAGCTGGTTGTGGTTTCCCAAGGAGGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QGRVEQVASCWH*QLVVVSQGGST Trigger: AGTGCTGCCTCCTTGGGAAACCACAACCAGCTGCAAATGCCAACAGCTAGCTACCTGCTCAACTCTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | ACCCTGCCAGACTGCAGGCCTGTTCAGGATCTTCTTCACCCAATGTTCCCAAAGGATTATAGGTCCAGCTaGGGTGGCTTCCTTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLPDCRPVQDLLHPMFPKDYRSS*GGFLFL Trigger: GAGGAAAAGGAAGCCACCGCAGCTGGACCTATAATC...CTTTGGGAACATTGGGTGAAGAAGATCCTGAACAGGCCTGCAGTCTGGCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | CAACCTCTGGAACCCGAAGGCAAGAGGGACAGCTGTGTCCTCATAGGACTTCTGCGAAGCCAGCCATATTaGAAGTCTGTCATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLEPEGKRDSCVLIGLLRSQPY*KSVIFH Trigger: GTGGAAGATGACAGACTTGCAATATGGCTGGCTTCG...CAGAAGTCCTATGAGGACACAGCTGTCCCTCTTGCCTTCGGGTTCCAGAGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CCA 90 bp | AAACAGTACTGTAACATCAAGGGAGACACAGCACAGGGAGCCACCCGAGAATCTACCTCTCAGGTTGGGTaGAGAAACCTCCGCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQYCNIKGDTAQGATRESTSQVG*RNLRDV Trigger: TACATCGCGGAGGTTTCTCCACCCAACCTGAGAGGT...AGATTCTCGGGTGGCTCCCTGTGCTGTGTCTCCCTTGATGTTACAGTACTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS-3UTR CCA 90 bp | CAACCTCTGGAACCCGAAGGCAAGAGGGACAGCTGTGTCCTCATAGGACTTCTGGCAGAAACCACAGTCTaGATCCAGCATACACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QPLEPEGKRDSCVLIGLLAETTV*IQHTLI Trigger: AATGAGTGTATGCTGGATCCAGACTGTGGTTTCTGC...CAGAAGTCCTATGAGGACACAGCTGTCCCTCTTGCCTTCGGGTTCCAGAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 72 bp | CACGGGGTTAAAGTAGCTCACGTCCTCAGGGGGAAATaGCAAGTAATTAGAAGTGAGGTGTGCTCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVKVAHVLRGK*QVIRSEVCSCP Trigger: AGGACAGGAGCACACCTCACTTCTAATTACTTGCAATTTCCCCCTGAGGACGTGAGCTACTTTAACCCCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR TCA 90 bp | AAACAGTACTGTAACATCAAGGGAGACACAGCACAGGGAGCCACCCGAGAATCTCCAGTTTATTCCAGCTaGGCACGCATTTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KQYCNIKGDTAQGATRESPVYSS*ARISCT Trigger: AGTACAGGAAATGCGTGCTCAGCTGGAATAAACTGG...AGATTCTCGGGTGGCTCCCTGTGCTGTGTCTCCCTTGATGTTACAGTACTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | GCTGACCAATATAGGTGTAGCCAGCAAAATTATTACAGATGTCTATATGGAAGATCTCGCCCATCAGGCTaGTCAGGCTGCGCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADQYRCSQQNYYRCLYGRSRPSG*SGCAAC Trigger: ACACGCTGCGCAGCCTGAGCAGCCTGATGGGCGAGA...TCTTCCATATAGACATCTGTAATAATTTTGCTGGCTACACCTATATTGGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS-3UTR GCA 90 bp | GCTGACCAATATAGGTGTAGCCAGCAAAATTATTACAGATGTCTATATGGAAGATCAGGCTGCTCAGGCTaGGCAGCGTGTACTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ADQYRCSQQNYYRCLYGRSGCSG*AACTPR Trigger: ACGTGGAGTACACGCTGCGCAGCCTGAGCAGCCTGA...TCTTCCATATAGACATCTGTAATAATTTTGCTGGCTACACCTATATTGGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | GGACAGCTGTGTCCTCATAGGACTTCTGAATTTGTGGATGGAAGTTTAGATGGCTTTCATTATCACACCTaGCCCAGGCTGCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLCPHRTSEFVDGSLDGFHYHT*PRLLQL Trigger: CAACTGAAGCAGCCTGGGGCAGGTGTGATAATGAAA...GCCATCTAAACTTCCATCCACAAATTCAGAAGTCCTATGAGGACACAGCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 72 bp | TCTTCACCCAATGTTCCCAAAGGAAAGACACCTGGATaGGATTTGGGACACGTTTCGAAAGAAGCCTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPNVPKGKTPG*DLGHVSKEAYY Trigger: GTAATAGGCTTCTTTCGAAACGTGTCCCAAATCCAATCCAGGTGTCTTTCCTTTGGGAACATTGGGTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | CATGCATACAAAATTATGCATTCTTCATTCTCCTGCACATTAGCCACCCTGCCACATCAATGGTCTGATTaGCACGCATCTGGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HAYKIMHSSFSCTLATLPHQWSD*HASGTK Trigger: TTTTGTCCCAGATGCGTGGCAATCAGACCATTGATG...TGGCAGGGTGGCTAATGTGCAGGAGAATGAAGAATGCATAATTTTGTATGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS-3UTR CCA 90 bp | GCATTAGAACCTCTCTATGTCTTTTTCCAATGGAGAAACCTCCATGTCTCTAGATGTATCCCGTGCAGGTaGTATTTTGATCCGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALEPLYVFFQWRNLHVSRCIPCR*YFDPKE Trigger: CTCCTTCGGATCAAAATACCACCTGCACGGGATACA...TCTAGAGACATGGAGGTTTCTCCATTGGAAAAAGACATAGAGAGGTTCTAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAAACACCTGCCCCAGGCTaGTTCAGTTGTAGAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKTPAPG*FSCRGF Trigger: AAAGCCTCTACAACTGAAGCAGCCTGGGGCAGGTGT...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS-3UTR GCA 90 bp | CATGCATACAAAATTATGCATTCTTCATTCTCCTGCACATTAGCCACCCTGCCATGGTCCCATTCCAGGTaGAAAGAAAACAAGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: HAYKIMHSSFSCTLATLPWSHSR*KENKVQ Trigger: TTGTACCTTGTTTTCTTTGCACCTGGAATGGGACCA...TGGCAGGGTGGCTAATGTGCAGGAGAATGAAGAATGCATAATTTTGTATGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| 3UTR CAA 72 bp | CTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTaGACATCATTTCCAGCCGTATGTGCTTACATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNCLPRSQHQVF*TSFPAVCAYMH Trigger: ATGCATGTAAGCACATACGGCTGGAAATGATGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTAGCTCACCATCTGGAGGATGGTTaGGCTGTAGTACATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCSKLLRMRREHGVKVAHHLEDG*AVVHDS Trigger: ACTATCATGTACTACAGCGCAACCATCCTCCAGATG...GTGAGCTACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | TTTCACTTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTACGGAGAGATGATAGTTaGTTCCCTTCACGCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FHLCSKLLRMRREHGVKVRRDDS*FPSRGC Trigger: ACATCCGCGTGAAGGGAAGCAACTATCATCTCTCCG...TACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAAGTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTAGCTCACAATGAAATTGGTGAATaGTGTGATCGAAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSKLLRMRREHGVKVAHNEIGE*CDRSQP Trigger: TGGCTGGCTTCGATCACAGCATTCACCAATTTCATT...GTGAGCTACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CCA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAACATACTCCTCATCAATaGTCTGATTGCCACGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKHTPHQ*SDCHAS Trigger: AGATGCGTGGCAATCAGACCATTGATGAGGAGTATG...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAAGAGCACCTTCAGCTTTaGACTTGGTTTCATTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKEHLQL*TWFHYH Trigger: GTGATAATGAAACCAAGTTCAAAGCTGAAGGTGCTC...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR TCA 90 bp | GCTGACCAATATAGGTGTAGCCAGCAAAATTATTACAGATGTCTATATGGAAGAAAGAAACCAGCACGTTaGAAATCCAGTTTATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADQYRCSQQNYYRCLYGRKKPAR*KSSLFQ Trigger: CTGGAATAAACTGGATTTTCAACGTGCTGGTTTCTT...TCTTCCATATAGACATCTGTAATAATTTTGCTGGCTACACCTATATTGGTCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CCA 90 bp | TTTCACTTGTGTAGCAAATTACTAAGAATGAGAAGAGAACACGGGGTTAAAGTAAGAGGCTTTGTTAACTaGAACACAGGAGGAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FHLCSKLLRMRREHGVKVRGFVN*NTGGIN Trigger: ATTGATTCCTCCTGTGTTCCAGTTAACAAAGCCTCT...TACTTTAACCCCGTGTTCTCTTCTCATTCTTAGTAATTTGCTACACAAGTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| 3UTR CAA 72 bp | CAAGATATGAATAAGTCTCATATGTGCCTCTCTGTCTaGTATGTTAGAGGTATGAGTTACCGTTACTATATA | + |
|
Preference number: 4 (lower is better) Translates to: QDMNKSHMCLSV*YVRGMSYRYYI Trigger: TATATAGTAACGGTAACTCATACCTCTAACATACAAGACAGAGAGGCACATATGAGACTTATTCATATCTTG 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | CGGCGGAGCCCACGGTGCACAGGGCGCTGGCCAGCAGGATGGCGCTaGGCCGACCGAGGGCGCCGTTCAGGGCCCCTCCGGCCAGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRSPRCTGRWPAGWR*ADRGRRSGPLRPAP Trigger: CGGCGCTGGCCGGAGGGGCCCTGAACGGCGCCCTCGGTCGGCGCAGCGCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | CGGCCGCGTACACGAAGGCCGGGGTCTCGTCGCGCTGGAACTGCCTaGGCGCCGCGCGCTCCAGCTCCGCGCCCTGCAGGCTGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPRTRRPGSRRAGTA*APRAPAPRPAGWRP Trigger: CGGCCGCCAGCCTGCAGGGCGCGGAGCTGGAGCGCGCGGCGCGCAGGCAGTTCCAGCGCGACGAGACCCCGGCCTTCGTGTACGCGGCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 90 bp | CCAGCACGGCGGAGCCCACGGTGCACAGGGCGCTGGCCAGCAGGATaGCGCTGCGCCGACCGAGGGCGCCGTTCAGGGCCCCTCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PARRSPRCTGRWPAG*RCADRGRRSGPLRP Trigger: TGGCCGGAGGGGCCCTGAACGGCGCCCTCGGTCGGCGCAGCGCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCGTGCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 90 bp | TGCCGAGCCCCACGACCAGGCGGCCGGCCAGCAGCGTCTCCTTGTTaGCGGCGGCGGCCAGCACGGCGGAGCCCACGGTGCACAGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRAPRPGGRPAASPC*RRRPARRSPRCTGR Trigger: GCGCCCTGTGCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGAGACGCTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | GCGTCTCCTTGTTGGCGGCGGCGGCCAGCACGGCGGAGCCCACGGTaGACAGGGCGCTGGCCAGCAGGATGGCGCTGCGCCGACCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPCWRRRPARRSPR*TGRWPAGWRCADRG Trigger: CCCTCGGTCGGCGCAGCGCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGAGACGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | GCGCCCCCGGCTCCGGCTGCCGGCGGCGCCTCTCGCCCATCAGGCTaGTCAGGCTGCGCAGCGTGTACTCCACGTCCTCGCTCGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: APPAPAAGGASRPSG*SGCAACTPRPRSPC Trigger: GCAAGGCGAGCGAGGACGTGGAGTACACGCTGCGCAGCCTGAGCAGCCTGATGGGCGAGAGGCGCCGCCGGCAGCCGGAGCCGGGGGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 90 bp | GCGCCCGACACCAGCAGCTCCTGCCACATCGCGCCCAGGCGCATCTaGCGCCGCAGCAGCAGCATGGCCCCCGACACCACGCCGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: APDTSSSCHIAPRRI*RRSSSMAPDTTPVS Trigger: CGACACCGGCGTGGTGTCGGGGGCCATGCTGCTGCTGCGGCGCCAGATGCGCCTGGGCGCGATGTGGCAGGAGCTGCTGGTGTCGGGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | GTTGGGTGGAGAAACCTCCGCGATGTACACGGGCACGGTCATGGATaGGATGCCGATGCCGAGCCCCACGACCAGGCGGCCGGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGWRNLRDVHGHGHG*DADAEPHDQAAGQQ Trigger: CTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCGCGGAGGTTTCTCCACCCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | AAACCTCCGCGATGTACACGGGCACGGTCATGGATGCGATGCCGATaGCGAGCCCCACGACCAGGCGGCCGGCCAGCAGCGTCTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPPRCTRARSWMRCR*RAPRPGGRPAASPC Trigger: ACAAGGAGACGCTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCGCGGAGGTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 90 bp | TCAGGTTGGGTGGAGAAACCTCCGCGATGTACACGGGCACGGTCATaGATGCGATGCCGATGCCGAGCCCCACGACCAGGCGGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGWVEKPPRCTRARS*MRCRCRAPRPGGRP Trigger: TGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCGCGGAGGTTTCTCCACCCAACCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | CATTCCAGGTGCAAAGAAAACAAGGTACAACACCAGGCCCACGAGTaGTGTCCAGGAGTAGGGGGTAGGGCAGAAACTGTAAGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSRCKENKVQHQAHE*CPGVGGRAETVSPV Trigger: CACTGGGCTTACAGTTTCTGCCCTACCCCCTACTCCTGGACAGCACTCGTGGGCCTGGTGTTGTACCTTGTTTTCTTTGCACCTGGAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 90 bp | GTCCAGCTGCGGTGGCTTCCTTTTCCTCCTCCTCGATACTGTTCCTaGTGCTGTCATACTCCTCATCAATGGTCTGATTGCCACGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VQLRWLPFPPPRYCS*CCHTPHQWSDCHAS Trigger: AGATGCGTGGCAATCAGACCATTGATGAGGAGTATGACAGCATCAGGAACAGTATCGAGGAGGAGGAAAAGGAAGCCACCGCAGCTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | CCATCCATCCTTCTGCAGGTAACTGAAGGCGCCATCGACAACACTTaGAAAGAACTGTCCGCCTGTGATGAAGAGGGTGTTGATGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSILLQVTEGAIDNT*KELSACDEEGVDGD Trigger: GTCACCATCAACACCCTCTTCATCACAGGCGGACAGTTCTTTGCAAGTGTTGTCGATGGCGCCTTCAGTTACCTGCAGAAGGATGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 90 bp | TATTGCAAGTCTGTCATCTTCCACGCCGGACATCTGGAGGATGGTTaGGCTGTAGTACATGATAGTGTTGATGCCCGAGAGTTGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YCKSVIFHAGHLEDG*AVVHDSVDARELLE Trigger: TTCCAGCAACTCTCGGGCATCAACACTATCATGTACTACAGCGCAACCATCCTCCAGATGTCCGGCGTGGAAGATGACAGACTTGCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCTGTGTCCTCATAGGACTTCTGAATTTGTGGATGGAAGTTTAGATGGCTCGAAGCCAGCCATATaGCAAGTCTGTCATCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQLCPHRTSEFVDGSLDGSKPAI*QVCHLP Trigger: TGGAAGATGACAGACTTGCAATATGGCTGGCTTCGA...GCCATCTAAACTTCCATCCACAAATTCAGAAGTCCTATGAGGACACAGCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS TCA 90 bp | TGTAGAGGCTTTGTTAACTGGAACACAGGAGGAATCAATGACAGCTaGACCGTTGATCTTGTAGCAGAAACCACAGTCTGGATCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CRGFVNWNTGGINDS*TVDLVAETTVWIQH Trigger: ATGCTGGATCCAGACTGTGGTTTCTGCTACAAGATCAACGGTTCAGCTGTCATTGATTCCTCCTGTGTTCCAGTTAACAAAGCCTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGTTGTTAAGACTGGACCTAAAGTGTGTTTCATTGATAAAACTGTTGAAATCACGGTCCAGGGCATaGGTCCCATTCCAGGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WQLLRLDLKCVSLIKLLKSRSRA*VPFQVQ Trigger: TTGCACCTGGAATGGGACCAATGCCCTGGACCGTGA...TTTCAACAGTTTTATCAATGAAACACACTTTAGGTCCAGTCTTAACAACTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS TCA 90 bp | AAAGGTCAAAGAAACCAGCACGTTGAAAATCCAGTTTATTCCAGCTaGGCACGCATTTCCTGTACTTCTTGCCCAGAGAGGATAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGQRNQHVENPVYSS*ARISCTSCPERIDF Trigger: GAAATCTATCCTCTCTGGGCAAGAAGTACAGGAAATGCGTGCTCAGCTGGAATAAACTGGATTTTCAACGTGCTGGTTTCTTTGACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
||
| CDS-3UTR CAA 90 bp | AGCGCTGTAACACTGAACTGTCTCCCAAGATCACAACATCAAGTCTTTTTGACAAAAGAAACCAGCACGTaGAAAATCCAGTTTATTCCA | + |
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Preference number: 5 (lower is better) Translates to: SAVTLNCLPRSQHQVFLTKETST*KIQFIP Trigger: TGGAATAAACTGGATTTTCAACGTGCTGGTTTCTTT...TGTCAAAAAGACTTGATGTTGTGATCTTGGGAGACAGTTCAGTGTTACAGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | GCGGCCGCGCCCACCGCGCCCGACACCAGCAGCTCCTaGCACATCGCGCCCAGGCGCATCTGGCGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AAAPTAPDTSSS*HIAPRRIWRRS Trigger: GCTGCGGCGCCAGATGCGCCTGGGCGCGATGTGGCAGGAGCTGCTGGTGTCGGGCGCGGTGGGCGCGGCCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | CCACGGTGCACAGGGCGCTGGCCAGCAGGATGGCGCTaGGCCGACCGAGGGCGCCGTTCAGGGCCCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: PRCTGRWPAGWR*ADRGRRSGPLR Trigger: CCGGAGGGGCCCTGAACGGCGCCCTCGGTCGGCGCAGCGCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | TGTTGGCGGCGGCGGCCAGCACGGCGGAGCCCACGGTaGACAGGGCGCTGGCCAGCAGGATGGCGCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: CWRRRPARRSPR*TGRWPAGWRCA Trigger: GGCGCAGCGCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 72 bp | GCGGCCGCGTACACGAAGGCCGGGGTCTCGTCGCGCTaGAACTGCCTGCGCGCCGCGCGCTCCAGCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: AAAYTKAGVSSR*NCLRAARSSSA Trigger: CGCGGAGCTGGAGCGCGCGGCGCGCAGGCAGTTCCAGCGCGACGAGACCCCGGCCTTCGTGTACGCGGCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 72 bp | CGGAGCCCACGGTGCACAGGGCGCTGGCCAGCAGGATaGCGCTGCGCCGACCGAGGGCGCCGTTCAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSPRCTGRWPAG*RCADRGRRSGP Trigger: GGGCCCTGAACGGCGCCCTCGGTCGGCGCAGCGCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 72 bp | CCACGACCAGGCGGCCGGCCAGCAGCGTCTCCTTGTTaGCGGCGGCGGCCAGCACGGCGGAGCCCACGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PRPGGRPAASPC*RRRPARRSPRC Trigger: GCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGAGACGCTGCTGGCCGGCCGCCTGGTCGTGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 72 bp | AGCCCCACGACCAGGCGGCCGGCCAGCAGCGTCTCCTaGTTGGCGGCGGCGGCCAGCACGGCGGAGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: SPTTRRPASSVS*LAAAASTAEPT Trigger: CGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGAGACGCTGCTGGCCGGCCGCCTGGTCGTGGGGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 90 bp | CCGATGCCGAGCCCCACGACCAGGCGGCCGGCCAGCAGCGTCTCCTaGTTGGCGGCGGCGGCCAGCACGGCGGAGCCCACGGTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: PMPSPTTRRPASSVS*LAAAASTAEPTVHR Trigger: CCTGTGCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGAGACGCTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | ACACGAAGGCCGGGGTCTCGTCGCGCTGGAACTGCCTaGGCGCCGCGCGCTCCAGCTCCGCGCCCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TRRPGSRRAGTA*APRAPAPRPAG Trigger: GCCTGCAGGGCGCGGAGCTGGAGCGCGCGGCGCGCAGGCAGTTCCAGCGCGACGAGACCCCGGCCTTCGTGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | GCTCCGGCTGCCGGCGGCGCCTCTCGCCCATCAGGCTaGTCAGGCTGCGCAGCGTGTACTCCACGTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: APAAGGASRPSG*SGCAACTPRPR Trigger: GCGAGGACGTGGAGTACACGCTGCGCAGCCTGAGCAGCCTGATGGGCGAGAGGCGCCGCCGGCAGCCGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | GCCGGCGGCGCCTCTCGCCCATCAGGCTGCTCAGGCTaGGCAGCGTGTACTCCACGTCCTCGCTCGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: AGGASRPSGCSG*AACTPRPRSPC Trigger: GCAAGGCGAGCGAGGACGTGGAGTACACGCTGCGCAGCCTGAGCAGCCTGATGGGCGAGAGGCGCCGCCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | CGATGTACACGGGCACGGTCATGGATGCGATGCCGATaGCGAGCCCCACGACCAGGCGGCCGGCCAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RCTRARSWMRCR*RAPRPGGRPAA Trigger: CGCTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | AGAAACCTCCGCGATGTACACGGGCACGGTCATGGATaGGATGCCGATGCCGAGCCCCACGACCAGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RNLRDVHGHGHG*DADAEPHDQAA Trigger: GGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCGCGGAGGTTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 72 bp | GTGGAGAAACCTCCGCGATGTACACGGGCACGGTCATaGATGCGATGCCGATGCCGAGCCCCACGACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VEKPPRCTRARS*MRCRCRAPRPG Trigger: GCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCGCGGAGGTTTCTCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 90 bp | CCTGTGATGAAGAGGGTGTTGATGGTGACCAGGCGACCTCTCAGGTaGGGTGGAGAAACCTCCGCGATGTACACGGGCACGGTCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: PVMKRVLMVTRRPLR*GGETSAMYTGTVMD Trigger: ATCCATGACCGTGCCCGTGTACATCGCGGAGGTTTCTCCACCCAACCTGAGAGGTCGCCTGGTCACCATCAACACCCTCTTCATCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 72 bp | CTTGCAAAGAACTGTCCGCCTGTGATGAAGAGGGTGTaGATGGTGACCAGGCGACCTCTCAGGTTGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LAKNCPPVMKRV*MVTRRPLRLGG Trigger: TCCACCCAACCTGAGAGGTCGCCTGGTCACCATCAACACCCTCTTCATCACAGGCGGACAGTTCTTTGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 90 bp | TCGACAACACTTGCAAAGAACTGTCCGCCTGTGATGAAGAGGGTGTaGATGGTGACCAGGCGACCTCTCAGGTTGGGTGGAGAAACCTCC | + |
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Preference number: 6 (lower is better) Translates to: STTLAKNCPPVMKRV*MVTRRPLRLGGETS Trigger: GGAGGTTTCTCCACCCAACCTGAGAGGTCGCCTGGTCACCATCAACACCCTCTTCATCACAGGCGGACAGTTCTTTGCAAGTGTTGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 72 bp | ATCCGAAGGAGTCGTTGGTCTAAAAGTGACCCGTGGTaGGACCTGTGCCGAGAGCAAAAATCCCAGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: IRRSRWSKSDPW*DLCREQKSQGK Trigger: CTTGCCCTGGGATTTTTGCTCTCGGCACAGGTCTCACCACGGGTCACTTTTAGACCAACGACTCCTTCGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | TCCCAGGGCAAGGATAATCAGTGCTACTGTGGTACCTaGCAAACTACCAAAGGTAAGCTTCCTGCGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: SQGKDNQCYCGT*QTTKGKLPATH Trigger: GTGGGTCGCAGGAAGCTTACCTTTGGTAGTTTGGCAGGTACCACAGTAGCACTGATTATCCTTGCCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | TGCAAAGAAAACAAGGTACAACACCAGGCCCACGAGTaGTGTCCAGGAGTAGGGGGTAGGGCAGAAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: CKENKVQHQAHE*CPGVGGRAETV Trigger: TACAGTTTCTGCCCTACCCCCTACTCCTGGACAGCACTCGTGGGCCTGGTGTTGTACCTTGTTTTCTTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | CCACGTCAGAAGCGTCGTTGTCGGAGAGATGATAGTTaGTTCCCTTCACGCGGATGTACTCAATGTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: PRQKRRCRRDDS*FPSRGCTQCTS Trigger: GGAGGTACATTGAGTACATCCGCGTGAAGGGAAGCAACTATCATCTCTCCGACAACGACGCTTCTGACGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 72 bp | GGCAGAAACTGTAAGCCCAGTGAGCACCTTCAGCTTTaGACTTGGTTTCATTATCACACCTGCCCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GRNCKPSEHLQL*TWFHYHTCPRL Trigger: CAGCCTGGGGCAGGTGTGATAATGAAACCAAGTTCAAAGCTGAAGGTGCTCACTGGGCTTACAGTTTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | CTTCTGCAGGTAACTGAAGGCGCCATCGACAACACTTaGAAAGAACTGTCCGCCTGTGATGAAGAGGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LLQVTEGAIDNT*KELSACDEEGV Trigger: AACACCCTCTTCATCACAGGCGGACAGTTCTTTGCAAGTGTTGTCGATGGCGCCTTCAGTTACCTGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 72 bp | CCAACATGTACCTCCATCCATCCTTCTGCAGGTAACTaGAGGCGCCATCGACAACACTTGCAAAGAACTGTC | + |
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Preference number: 6 (lower is better) Translates to: PTCTSIHPSAGN*RRHRQHLQRTV Trigger: GACAGTTCTTTGCAAGTGTTGTCGATGGCGCCTTCAGTTACCTGCAGAAGGATGGATGGAGGTACATGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 72 bp | CGGTGGCTTCCTTTTCCTCCTCCTCGATACTGTTCCTaGTGCTGTCATACTCCTCATCAATGGTCTGATTGC | + |
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Preference number: 6 (lower is better) Translates to: RWLPFPPPRYCS*CCHTPHQWSDC Trigger: GCAATCAGACCATTGATGAGGAGTATGACAGCATCAGGAACAGTATCGAGGAGGAGGAAAAGGAAGCCACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | TGCCGAGAGCAAAAATCCCAGGGCAAGGATAATCAGTaGTACTGTGGTACCTGCCAAACTACCAAAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: CREQKSQGKDNQ*YCGTCQTTKGK Trigger: CTTACCTTTGGTAGTTTGGCAGGTACCACAGTAGCACTGATTATCCTTGCCCTGGGATTTTTGCTCTCGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 90 bp | CCCACTTTCTCGACGAGCCAGACTCCCACTAGTGTGAAAATGAAATaGGTGAATGCTGTGATCGAAGCCAGCCATATTGCAAGTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PTFSTSQTPTSVKMK*VNAVIEASHIASLS Trigger: TGACAGACTTGCAATATGGCTGGCTTCGATCACAGCATTCACCAATTTCATTTTCACACTAGTGGGAGTCTGGCTCGTCGAGAAAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 72 bp | AGAAACCAGCACGTTGAAAATCCAGTTTATTCCAGCTaGGCACGCATTTCCTGTACTTCTTGCCCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RNQHVENPVYSS*ARISCTSCPER Trigger: CCTCTCTGGGCAAGAAGTACAGGAAATGCGTGCTCAGCTGGAATAAACTGGATTTTCAACGTGCTGGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CCA 72 bp | GAGAGGATAGATTTCAGAGTTCACGGTCCAGGGCATTaGTCCCATTCCAGGTGCAAAGAAAACAAGGTACAA | + |
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Preference number: 6 (lower is better) Translates to: ERIDFRVHGPGH*SHSRCKENKVQ Trigger: TTGTACCTTGTTTTCTTTGCACCTGGAATGGGACCAATGCCCTGGACCGTGAACTCTGAAATCTATCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS GCA 72 bp | AGCAGAAACCACAGTCTGGATCCAGCATACACTCATTaGAGTAACTGTATCCCGTGCAGGTGGTATTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SRNHSLDPAYTH*SNCIPCRWYFD Trigger: ATCAAAATACCACCTGCACGGGATACAGTTACTGCAATGAGTGTATGCTGGATCCAGACTGTGGTTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS TCA 72 bp | TTTGTTAACTGGAACACAGGAGGAATCAATGACAGCTaGACCGTTGATCTTGTAGCAGAAACCACAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FVNWNTGGINDS*TVDLVAETTVW Trigger: CCAGACTGTGGTTTCTGCTACAAGATCAACGGTTCAGCTGTCATTGATTCCTCCTGTGTTCCAGTTAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 72 bp | TCTGCTGTGTGTAAAAAGGTCAAAGAAACCAGCACGTaGAAAATCCAGTTTATTCCAGCTGAGCACGCATTT | + |
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Preference number: 6 (lower is better) Translates to: SAVCKKVKETST*KIQFIPAEHAF Trigger: AAATGCGTGCTCAGCTGGAATAAACTGGATTTTCAACGTGCTGGTTTCTTTGACCTTTTTACACACAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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| CDS CAA 90 bp | GTAAGATACTCTGCTGTGTGTAAAAAGGTCAAAGAAACCAGCACGTaGAAAATCCAGTTTATTCCAGCTGAGCACGCATTTCCTGTACTT | + |
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Preference number: 6 (lower is better) Translates to: VRYSAVCKKVKETST*KIQFIPAEHAFPVL Trigger: AAGTACAGGAAATGCGTGCTCAGCTGGAATAAACTGGATTTTCAACGTGCTGGTTTCTTTGACCTTTTTACACACAGCAGAGTATCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109283.2 |
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