Pregenerated sensors for SLC2A12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037490Ensembl transcript IDs: ENSMUST00000042261.5
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCTCCTGCTGTGCGCCTGAGGCCCAGGCTCTACGCTGGCTCCTaGTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: RPPAVRLRPRLYAGS*CCPSSSSWLPGHVA Trigger: CGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAGCCTGGGCCTCAGGCGCACAGCAGGAGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 90 bp | GAGAAGCAGGCCTCCTGCTGTGCGCCTGAGGCCCAGGCTCTACGCTaGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: EKQASCCAPEAQALR*LLLLPILILLATRA Trigger: TGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAGCCTGGGCCTCAGGCGCACAGCAGGAGGCCTGCTTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 90 bp | CCCAGGCTCTACGCTGGCTCCTGCTGCTGCCCATCCTCATCCTCTTaGCTACCAGGGCATGTGGCGGGCACACACCTCGTCAGACTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: PRLYAGSCCCPSSSS*LPGHVAGTHLVRLG Trigger: TCCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAGCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 90 bp | GCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTaGCGGGCACACACCTCGTCAGACTGGGACCATTTGGTGGTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: APAAAHPHPLGYQGM*RAHTSSDWDHLVVK Trigger: TTTCACCACCAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 90 bp | GCAGAGCTGGAGCTCTGGGTAAATGAGTGTCTAAGGAGGGAAGAGTaGGCATGGCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: AELELWVNECLRREE*AWPSLGSPVRPLSG Trigger: GCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGCCATGCTCACTCTTCCCTCCTTAGACACTCATTTACCCAGAGCTCCAGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 90 bp | GAAGGTACCTGGCCTGAGGTCAGGGCCATCCCTCTGTCTGTAGCCTaGGGTAGAGTGATTCCTGAGGGCAGGGAAGAAGTGCAGGAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: EGTWPEVRAIPLSVA*GRVIPEGREEVQEG Trigger: ACCTTCCTGCACTTCTTCCCTGCCCTCAGGAATCACTCTACCTCAGGCTACAGACAGAGGGATGGCCCTGACCTCAGGCCAGGTACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 90 bp | AGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTTGCTGGCGTaGCTCTCCATCACTGCTCATCACAGAAAGGAAGGTACCTGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: RPEKRIPWVKATLLA*LSITAHHRKEGTWP Trigger: AGGCCAGGTACCTTCCTTTCTGTGATGAGCAGTGATGGAGAGCCACGCCAGCAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 90 bp | CCTCTTGGCTACCAGGGCATGTGGCGGGCACACACCTCGTCAGACTaGGACCATTTGGTGGTGAAAGGAAGAAAAACCCAAATTAGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: PLGYQGMWRAHTSSD*DHLVVKGRKTQIRE Trigger: CTCCCTAATTTGGGTTTTTCTTCCTTTCACCACCAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 90 bp | GCATGTGGCGGGCACACACCTCGTCAGACTGGGACCATTTGGTGGTaGAAGGAAGAAAAACCCAAATTAGGGAGGGGGTCTGGTCTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: ACGGHTPRQTGTIWW*KEEKPKLGRGSGLF Trigger: AAAGAGACCAGACCCCCTCCCTAATTTGGGTTTTTCTTCCTTTCACCACCAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 90 bp | CAAGAAAGGAACCAGCACAGTTCTTCCCGAGTTGGAAACACACTGTaGTGGGATCAGGGTTTAAATCTCCCTTCCTCAGAGGCTGCACTT | + |
|
Preference number: 1 (lower is better) Translates to: QERNQHSSSRVGNTL*WDQGLNLPSSEAAL Trigger: AAGTGCAGCCTCTGAGGAAGGGAGATTTAAACCCTGATCCCATCACAGTGTGTTTCCAACTCGGGAAGAACTGTGCTGGTTCCTTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 90 bp | TGTGCTCGGAGTGGCATGGGGCTAATACTGGGTAAAAGGTTATATTaGAAACACAAATGTCTCGTTCCATACTTGGTGATAAGAGAACAA | + |
|
Preference number: 1 (lower is better) Translates to: CARSGMGLILGKRLY*KHKCLVPYLVIREQ Trigger: TTGTTCTCTTATCACCAAGTATGGAACGAGACATTTGTGTTTTCAATATAACCTTTTACCCAGTATTAGCCCCATGCCACTCCGAGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 90 bp | GAAGGTTCCAACGCTTCATTGAAGTCATTAGTAATAAGCTACATTTaGTTATTTTTGCCCATTCACAAGGAATACACAAACAAAATAGCC | + |
|
Preference number: 1 (lower is better) Translates to: EGSNASLKSLVISYI*LFLPIHKEYTNKIA Trigger: GGCTATTTTGTTTGTGTATTCCTTGTGAATGGGCAAAAATAAGCAAATGTAGCTTATTACTAATGACTTCAATGAAGCGTTGGAACCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CAA 90 bp | GCCCAGGCTCTACGCTGGCTCCTGCTGCTGCCCATCCTCATCCTCTaGGCTACCAGGGCATGTGGCGGGCACACACCTCGTCAGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AQALRWLLLLPILIL*ATRACGGHTPRQTG Trigger: CCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAGCCTGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR GCA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCAGGGCAGGGAAGAAGTaGAGGAAGGTGGGCTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: AESGVTCEATVWQLPGQSRAGKK*RKVGCD Trigger: GTCACAGCCCACCTTCCTGCACTTCTTCCCTGCCCT...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CCA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCAGAAAGGAAGGTACCTaGCCTGAGGTCAGGGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: AESGVTCEATVWQLPGQSRKEGT*PEVRAI Trigger: GATGGCCCTGACCTCAGGCCAGGTACCTTCCTTTCT...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACCAGGAAGGTGGGCTGTaGCAGGTTACCACGAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHQEGGL*QVTTKA Trigger: GGCTTTCGTGGTAACCTGTCACAGCCCACCTTCCTG...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCAGAAGTGCAGGAAGGTaGGCTGTGACAGGTTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: GSCCCPSSSSWLPGHVAGRSAGR*AVTGYH Trigger: GTGGTAACCTGTCACAGCCCACCTTCCTGCACTTCT...GCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATCTCTACGCTGGCTCCTaGTGCTGCCCATCCTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNLYAGS*CCPSSS Trigger: GGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAG...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTGCTGTGCGCCTGAGGTGGCTCTCCATCACTaGTCATCACAGAAAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPSSEAALEKQASCCAPEVALHH*SSQKGR Trigger: CCTTCCTTTCTGTGATGAGCAGTGATGGAGAGCCAC...CTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CAA 90 bp | GGAAAAAGCAGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTaGCTGGCGTGGCTCTCCATCACTGCTCATCACAGAAAGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: GKSRPEKRIPWVKAT*LAWLSITAHHRKEG Trigger: ACCTTCCTTTCTGTGATGAGCAGTGATGGAGAGCCACGCCAGCAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CAA 90 bp | TACCAGGGCATGTGGCGGGCACACACCTCGTCAGACTGGGACCATTaGGTGGTGAAAGGAAGAAAAACCCAAATTAGGGAGGGGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YQGMWRAHTSSDWDH*VVKGRKTQIREGVW Trigger: CCAGACCCCCTCCCTAATTTGGGTTTTTCTTCCTTTCACCACCAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATAGTGAGGAGAGAACATaGCAGAGACCCTGTAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNSEERT*QRPCKS Trigger: GGACTTACAGGGTCTCTGCCATGTTCTCTCCTCACT...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTGCTGTGCGCCTGAGGGCAAAAGTCTGTTTTaGGAAGAGGAATTAATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LPSSEAALEKQASCCAPEGKSLF*EEELMV Trigger: CACCATTAATTCCTCTTCCCAAAACAGACTTTTGCC...CTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACATCTTAAAACTCAAATaGAAAAAGCAGGCCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHILKLK*KKQARE Trigger: TTCTCTGGCCTGCTTTTTCCATTTGAGTTTTAAGAT...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATACTGGTGGACTTGAATaGCAACTAAAGTCTTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNTGGLE*QLKSYS Trigger: TGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGT...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTACTGGTGGACTTGAATGCCAACTAAAGTCTTATTCAAGACACCATCCTAAACACGTGGTAAGTGCCTaGCCAGAACACCACTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: CTGGLECQLKSYSRHHPKHVVSA*PEHHCV Trigger: GACACAGTGGTGTTCTGGGCAGGCACTTACCACGTG...TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CAA 90 bp | CATCAGGACATTGGTGCCTCTTGTACCTTTTGGCAAAAGTCTGTTTaGGGAAGAGGAATTAATGGTGGTCTTTCTAACTTCTCCATGACA | + |
|
Preference number: 2 (lower is better) Translates to: HQDIGASCTFWQKSV*GRGINGGLSNFSMT Trigger: TGTCATGGAGAAGTTAGAAAGACCACCATTAATTCCTCTTCCCAAAACAGACTTTTGCCAAAAGGTACAAGAGGCACCAATGTCCTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | GCTGTGCGCCTGAGGCCCAGGCTCTACGCTGGCTCCTaGTGCTGCCCATCCTCATCCTCTTGGCTACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AVRLRPRLYAGS*CCPSSSSWLPG Trigger: CCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAGCCTGGGCCTCAGGCGCACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | GGGAAGAGTGAGCATGGCCGAGTCTGGGGTCACCTGTaGGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GKSEHGRVWGHL*GHCLAASWAVP Trigger: GGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGCCATGCTCACTCTTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | GTGCGCCTGAGGCCCAGGCTCTACGCTGGCTCCTGCTaGTGCCCATCCTCATCCTCTTGGCTACCAGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRLRPRLYAGSC*CPSSSSWLPGH Trigger: ATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTAGAGCCTGGGCCTCAGGCGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | CCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTaGTGTGCGCCTGAGGCCCAGGCTCTACGCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSSEAALEKQAS*CAPEAQALRWL Trigger: GAGCCAGCGTAGAGCCTGGGCCTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCCATCCTCATCCTCTaGGCTACCAGGGCATGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AESGVTCEATVWQLPGQSPILIL*ATRACG Trigger: GCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGG...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 72 bp | TACGCTGGCTCCTGCTGCTGCCCATCCTCATCCTCTTaGCTACCAGGGCATGTGGCGGGCACACACCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: YAGSCCCPSSSS*LPGHVAGTHLV Trigger: GACGAGGTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCCAGCGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 72 bp | GCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTaGCGGGCACACACCTCGTCAGACTGGGACCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: AAHPHPLGYQGM*RAHTSSDWDHL Trigger: CAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | CCTGAGGGCAGGGAAGAAGTGCAGGAAGGTGGGCTGTaGCAGGTTACCACGAAAGCCTTCCCAGGAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PEGREEVQEGGL*QVTTKAFPGDN Trigger: GTTGTCTCCTGGGAAGGCTTTCGTGGTAACCTGTCACAGCCCACCTTCCTGCACTTCTTCCCTGCCCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | TGGCCTGAGGTCAGGGCCATCCCTCTGTCTGTAGCCTaGGGTAGAGTGATTCCTGAGGGCAGGGAAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WPEVRAIPLSVA*GRVIPEGREEV Trigger: CACTTCTTCCCTGCCCTCAGGAATCACTCTACCTCAGGCTACAGACAGAGGGATGGCCCTGACCTCAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 72 bp | GTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATGCTaGGAAGGAGTGAGTGGGTGTTGCGTCGCCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VWQLPGQSPQKC*EGVSGCCVAWF Trigger: AAACCAGGCGACGCAACACCCACTCACTCCTTCCCAGCATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 72 bp | AAGCGCATCCCGTGGGTAAAAGCCACCTTGCTGGCGTaGCTCTCCATCACTGCTCATCACAGAAAGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KRIPWVKATLLA*LSITAHHRKEG Trigger: ACCTTCCTTTCTGTGATGAGCAGTGATGGAGAGCCACGCCAGCAAGGTGGCTTTTACCCACGGGATGCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 72 bp | TCAAATGGAAAAAGCAGGCCAGAGAAGCGCATCCCGTaGGTAAAAGCCACCTTGCTGGCGTGGCTCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SNGKSRPEKRIP*VKATLLAWLSI Trigger: GATGGAGAGCCACGCCAGCAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCCATTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACGAACTAGAGAAAAAGTaGAAGGCATTGAACCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHELEKK*KALNLP Trigger: TGGCAGGTTCAATGCCTTCAACTTTTTCTCTAGTTC...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | CACACAGTGTCTTCAGAGGCACACGTGGTAAGTGCCTaGCCAGAACACCACTGTGTCTTGAGTACCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HTVSSEAHVVSA*PEHHCVLSTKL Trigger: CAGCTTGGTACTCAAGACACAGTGGTGTTCTGGGCAGGCACTTACCACGTGTGCCTCTGAAGACACTGTGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CCA 72 bp | TACCAGGGCATGTGGCGGGCACACACCTCGTCAGACTaGGACCATTTGGTGGTGAAAGGAAGAAAAACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YQGMWRAHTSSD*DHLVVKGRKTQ Trigger: TTGGGTTTTTCTTCCTTTCACCACCAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACATGCCCTGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | TGCAGATCCATTCGCTGTAACATGTTCAGTGTTCAGTaGCCTGAAAGCCAGGCAGAGCTGGAGCTCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CRSIRCNMFSVQ*PESQAELELWV Trigger: TACCCAGAGCTCCAGCTCTGCCTGGCTTTCAGGTCACTGAACACTGAACATGTTACAGCGAATGGATCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | AACCAGCACAGTTCTTCCCGAGTTGGAAACACACTGTaGTGGGATCAGGGTTTAAATCTCCCTTCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NQHSSSRVGNTL*WDQGLNLPSSE Trigger: CTCTGAGGAAGGGAGATTTAAACCCTGATCCCATCACAGTGTGTTTCCAACTCGGGAAGAACTGTGCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | GAAGGCATTGAACCTGCCAGTATTGTTTGCTTGACCTaGTACATCAGGACATTGGTGCCTCTTGTACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EGIEPASIVCLT*YIRTLVPLVPF Trigger: AAAAGGTACAAGAGGCACCAATGTCCTGATGTATCAGGTCAAGCAAACAATACTGGCAGGTTCAATGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | TCTTATTCAAGACACCATCCTAAACTACAACGTAGATaGAATGAAATCATCCACACAGTGTCTTCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SYSRHHPKLQRR*NEIIHTVSSEA Trigger: TGCCTCTGAAGACACTGTGTGGATGATTTCATTGCATCTACGTTGTAGTTTAGGATGGTGTCTTGAATAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | GGATTTACCACTTGTTTTAACAGTGAACTCCTGGTTTaGAGTGTTCAGAAACATGTATGTGAGGCAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: GFTTCFNSELLV*SVQKHVCEAET Trigger: AGTTTCTGCCTCACATACATGTTTCTGAACACTGCAAACCAGGAGTTCACTGTTAAAACAAGTGGTAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR TCA 72 bp | AGTGGCATGGGGCTAATACTGGGTAAAAGGTTATATTaGAAACACAAATGTCTCGTTCCATACTTGGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: SGMGLILGKRLY*KHKCLVPYLVI Trigger: TATCACCAAGTATGGAACGAGACATTTGTGTTTTCAATATAACCTTTTACCCAGTATTAGCCCCATGCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR GCA 72 bp | TATAAGCTGCATAATCTTTGTACTGGTGGACTTGAATaGCAACTAAAGTCTTATTCAAGACACCATCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: YKLHNLCTGGLE*QLKSYSRHHPK Trigger: TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACAAAGATTATGCAGCTTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCCCCGCGCAGGCAGGATaGCCTCCGCCGCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSCCCPSSSSWLPGHVAGPAQAG*PPPLAP Trigger: TGGAGCCAGCGGCGGAGGGCATCCTGCCTGCGCGGG...GCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCTCACAACCATTTCCTaGTCGTGGCAGGTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AESGVTCEATVWQLPGQSLTTIS*SWQVRA Trigger: AGCCCTGACCTGCCACGAGCAGGAAATGGTTGTGAG...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCAGGTGGTTACACTCTaGGAGCTGCTCTTGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AESGVTCEATVWQLPGQSQVVTL*ELLLGL Trigger: AAGCCCCAAGAGCAGCTCCCAGAGTGTAACCACCTG...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACCATTTCCTGCTCGTaGCAGGTCAGGGCTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSCCCPSSSSWLPGHVAGTISCS*QVRANS Trigger: GCTATTAGCCCTGACCTGCCACGAGCAGGAAATGGT...GCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCTCACTCTTAACTTCCTaGGGACTTTGCCTGCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: GSCCCPSSSSWLPGHVAGSLLTS*GLCLPT Trigger: AGTCGGCAGGCAAAGTCCTCAGGAAGTTAAGAGTGA...GCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATAGCAGCTGGGACGACTaGAGTGTCTGTGACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNSSWDD*SVCDSL Trigger: CAGGGAGTCACAGACACTGCAGTCGTCCCAGCTGCT...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCAATAGCGTTCTGATCTaGAGAAGAGCTCCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AESGVTCEATVWQLPGQSNSVLI*RRAPEM Trigger: CATCTCTGGAGCTCTTCTGCAGATCAGAACGCTATT...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCACACACACGTGGCAATaGAAGACAGGGATATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AESGVTCEATVWQLPGQSTHTWQ*KTGIWK Trigger: TTTCCATATCCCTGTCTTCCATTGCCACGTGTGTGT...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CAA 72 bp | AGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTaGCTGGCGTGGCTCTCCATCACTGCTCATCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPEKRIPWVKAT*LAWLSITAHHR Trigger: TCTGTGATGAGCAGTGATGGAGAGCCACGCCAGCAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCAATAGTATGTTTGGCTaGCCAGTGGTCTGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSCCCPSSSSWLPGHVAGNSMFG*PVVWTK Trigger: TTTTGTCCAGACCACTGGGCAGCCAAACATACTATT...GCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATGAAGAGCTCCAGAGATaGGCCCAAGTTCATAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNEELQR*AQVHNP Trigger: TGGGTTATGAACTTGGGCTCATCTCTGGAGCTCTTC...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACTGGGGCTTTCGTTTTTaGAGCTGTGTTGGCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHWGFRF*SCVGTN Trigger: ATTAGTGCCAACACAGCTTCAAAAACGAAAGCCCCA...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACTACAGAGGAAGGTTTTaGTGCCAATGTGGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHYRGRF*CQCGPQ Trigger: TTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTA...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATAGTCCTCTTCTGTGTTaGGGGGCAATTTCCGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNSPLLC*GAISAM Trigger: CATTGCGGAAATTGCCCCCCAACACAGAAGAGGACT...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATGCACCAACCAAGGCATaGGTCCCAGACCAATTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNAPTKA*VPDQLK Trigger: TTTCAATTGGTCTGGGACCCATGCCTTGGTTGGTGC...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | CATGACAGTGAGGAGAGAACATGGCAGAGACCCTGTAAGTCCTGCCACTGTGCCGAGGCCGCTGATGGCTaGAGTAACAGATGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HDSEERTWQRPCKSCHCAEAADG*SNRCQE Trigger: TTCCTGACATCTGTTACTGCAGCCATCAGCGGCCTC...GGCACAGTGGCAGGACTTACAGGGTCTCTGCCATGTTCTCTCCTCACTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | CTCCCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTGCTGTGCGCCTGAGTGGTTAAGAAGACTATaGCTTCTGCAGATGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSEAALEKQASCCAPEWLRRL*LLQMLV Trigger: CACCAACATCTGCAGAAGCCATAGTCTTCTTAACCA...CTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | CATGACAGTGAGGAGAGAACATGGCAGAGACCCTGTAAGTCCTGCCACTGTGCCTACATCGCTATTGCTTaGAGAACTCCCAGGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HDSEERTWQRPCKSCHCAYIAIA*RTPRGI Trigger: GATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTA...GGCACAGTGGCAGGACTTACAGGGTCTCTGCCATGTTCTCTCCTCACTGTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACTCCCAAAAACTGTACTaGTACTCATCTTTCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHSQKLY*YSSFKE Trigger: TTCCTTGAAAGATGAGTATCAGTACAGTTTTTGGGA...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTGCTGTGCGCCTGAGTATGAAGCATACCCATaGCAAACCAATAAGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSSEAALEKQASCCAPEYEAYP*QTNKIS Trigger: ACTGATCTTATTGGTTTGTCATGGGTATGCTTCATA...CTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| 3UTR CAA 72 bp | ATGTGGCGGGCACACACCTCGTCAGACTGGGACCATTaGGTGGTGAAAGGAAGAAAAACCCAAATTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MWRAHTSSDWDH*VVKGRKTQIRE Trigger: CTCCCTAATTTGGGTTTTTCTTCCTTTCACCACCAAATGGTCCCAGTCTGACGAGGTGTGTGCCCGCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | TCAAATGGAAAAAGCAGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTTGTCTGGTTCAGCAGATTaGGGCCCTCTGTGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNGKSRPEKRIPWVKATLSGSAD*GPLCFQ Trigger: TTGAAAACACAGAGGGCCCCAATCTGCTGAACCAGA...CAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCCATTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | TCAAATGGAAAAAGCAGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTTGCATAAACAAGCAAGCTaGCCAGGGACAGCCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNGKSRPEKRIPWVKATLHKQAS*PGTAIC Trigger: ACAAATGGCTGTCCCTGGCCAGCTTGCTTGTTTATG...CAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCCATTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | TGTACTGGTGGACTTGAATGCCAACTAAAGTCTTATTCAAGACACCATCCTAAATGGCGAGGGCCGTTGTaGCTGTCCCCTTCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGGLECQLKSYSRHHPKWRGPL*LSPSTQ Trigger: CTGTGTGGAAGGGGACAGTCACAACGGCCCTCGCCA...TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | TCAAATGGAAAAAGCAGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTTGACTGCTATTGCTAATTaGCAGGTTTCCTGTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SNGKSRPEKRIPWVKATLTAIAN*QVSCCI Trigger: TATGCAACAGGAAACCTGTCAATTAGCAATAGCAGT...CAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCCATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR TCA 90 bp | TGTACTGGTGGACTTGAATGCCAACTAAAGTCTTATTCAAGACACCATCCTAAAGGGTCCCAGACCAATTaGAAATGCAGCCACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTGGLECQLKSYSRHHPKGSQTN*KCSHIN Trigger: GTTTATGTGGCTGCATTTTCAATTGGTCTGGGACCC...TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | TGTACTGGTGGACTTGAATGCCAACTAAAGTCTTATTCAAGACACCATCCTAAATTACACTCTGGGAGCTaGTCTTGGGGCTTTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGGLECQLKSYSRHHPKLHSGS*SWGFRF Trigger: AAAACGAAAGCCCCAAGAGCAGCTCCCAGAGTGTAA...TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CCA 90 bp | TGTACTGGTGGACTTGAATGCCAACTAAAGTCTTATTCAAGACACCATCCTAAAAACTCCTCCAGGGACTaGTTAAGAAGACTATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGGLECQLKSYSRHHPKNSSRD*LRRLWL Trigger: AAGCCATAGTCTTCTTAACCAGTCCCTGGAGGAGTT...TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR GCA 90 bp | TGTACTGGTGGACTTGAATGCCAACTAAAGTCTTATTCAAGACACCATCCTAAAGTGATTCTTTTAAAGTaGTCCCTGAGACTGCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: CTGGLECQLKSYSRHHPKVILLK*SLRLLL Trigger: CAATAGCAGTCTCAGGGAGCACTTTAAAAGAATCAC...TTTAGGATGGTGTCTTGAATAAGACTTTAGTTGGCATTCAAGTCCACCAGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCGCCTGCCGACTCCTCTaGTCCCTTCATCACCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSCCCPSSSSWLPGHVAGACRLL*SLHHQE Trigger: TTCCTGGTGATGAAGGGACAAGAGGAGTCGGCAGGC...GCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCAGGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCAGGCTAGCTGCCTCATaGCTCTGGAAGCCAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AESGVTCEATVWQLPGQSRLAAS*LWKPTD Trigger: GTCTGTTGGCTTCCAGAGCAATGAGGCAGCTAGCCT...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | TCCGTACCTGTCTATGAGCACGCCTCCTGTGAGAGAGGCGAGGAATaGCCCGATGAGGAGGGAACTCACAACCATTTCCTGCTCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPVYEHASCERGEE*PDEEGTHNHFLLVA Trigger: TGCCACGAGCAGGAAATGGTTGTGAGTTCCCTCCTCATCGGGGCATTCCTCGCCTCTCTCACAGGAGGCGTGCTCATAGACAGGTACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | AAGCAAGCTGGCCAGGGACAGCCATTTGTAAGCAGCTGGGACGACTaGAGTGTCTGTGACTCCCTGGTGTTCAGTTCGGCTCAGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQAGQGQPFVSSWDD*SVCDSLVFSSAQSS Trigger: GCTGGACTGAGCCGAACTGAACACCAGGGAGTCACAGACACTGCAGTCGTCCCAGCTGCTTACAAATGGCTGTCCCTGGCCAGCTTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | ACAGAGGAAGGTTTTGCTGCCAATGTGGTCCACAAGGAGGGTTGCTaGGATAGTGCTAACCACCTTGACCACTCCCACCCCAGTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TEEGFAANVVHKEGC*DSANHLDHSHPSGG Trigger: GCCTCCACTGGGGTGGGAGTGGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | CTCCCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTGCTGTGCGCCTGAGATACAGAGGAAGGTTTaGCTGCCAATGTGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPSSEAALEKQASCCAPEIQRKV*LPMWST Trigger: TGTGGACCACATTGGCAGCAAAACCTTCCTCTGTAT...CTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | AGAGATGAGCCCAAGTTCATAACCCACCAGGAGGCCGCTGATGGCTaGAGTAACAGATGTCAGGAACGTAAACATGCTGGGACCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RDEPKFITHQEAADG*SNRCQERKHAGTSR Trigger: GCGGGAGGTCCCAGCATGTTTACGTTCCTGACATCTGTTACTGCAGCCATCAGCGGCCTCCTGGTGGGTTATGAACTTGGGCTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | GAGGCGAGGAATGCCCCGATGAGGAGGGAACTCACAACCATTTCCTaGTCGTGGCAGGTCAGGGCTAATAGCGTTCTGATCTGCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EARNAPMRRELTTIS*SWQVRANSVLICRR Trigger: TCTTCTGCAGATCAGAACGCTATTAGCCCTGACCTGCCACGAGCAGGAAATGGTTGTGAGTTCCCTCCTCATCGGGGCATTCCTCGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTGCCCATCCTCATCCTCTTGGCTACCAGGGCATGTGGCGGGCACACACATTCTGGTCCTCATGTaGTCCTTAGAGCGAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCCPSSSSWLPGHVAGTHILVLM*SLERNR Trigger: TCTGTTTCGCTCTAAGGACAACATGAGGACCAGAAT...GTGTGTGCCCGCCACATGCCCTGGTAGCCAAGAGGATGAGGATGGGCAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 90 bp | CCAGGGACAGCCATTTGTAAGCAGCTGGGACGACTGCAGTGTCTGTaGCTCCCTGGTGTTCAGTTCGGCTCAGTCCAGCATTTGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTAICKQLGRLQCL*LPGVQFGSVQHLVK Trigger: CTTTACCAAATGCTGGACTGAGCCGAACTGAACACCAGGGAGTCACAGACACTGCAGTCGTCCCAGCTGCTTACAAATGGCTGTCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | AGGAATGCCCCGATGAGGAGGGAACTCACAACCATTTCCTGCTCGTaGCAGGTCAGGGCTAATAGCGTTCTGATCTGCAGAAGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RNAPMRRELTTISCS*QVRANSVLICRRAP Trigger: TGGAGCTCTTCTGCAGATCAGAACGCTATTAGCCCTGACCTGCCACGAGCAGGAAATGGTTGTGAGTTCCCTCCTCATCGGGGCATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | CACATAAACAAGCAAGCTGGCCAGGGACAGCCATTTGTAAGCAGCTaGGACGACTGCAGTGTCTGTGACTCCCTGGTGTTCAGTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HINKQAGQGQPFVSS*DDCSVCDSLVFSSA Trigger: AGCCGAACTGAACACCAGGGAGTCACAGACACTGCAGTCGTCCCAGCTGCTTACAAATGGCTGTCCCTGGCCAGCTTGCTTGTTTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | GCCGAGTCTGGGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCTTGGTGAAGTTCATATaGATGTTGAGGTTCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: AESGVTCEATVWQLPGQSLVKFI*MLRFTM Trigger: CATTGTGAACCTCAACATCAATATGAACTTCACCAA...GGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCCCAGACTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | AATACAGAGGAAGGTTTTGCTGCCAATGTGGTCCACAAGGAGGGTTaGTGGGATAGTGCTAACCACCTTGACCACTCCCACCCCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NTEEGFAANVVHKEG*WDSANHLDHSHPSG Trigger: TCCACTGGGGTGGGAGTGGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | GACATCACGGAGGAGCCAATACAGAGGAAGGTTTTGCTGCCAATGTaGTCCACAAGGAGGGTTGCTGGGATAGTGCTAACCACCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: DITEEPIQRKVLLPM*STRRVAGIVLTTLT Trigger: GGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTATTGGCTCCTCCGTGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | TCAAATGGAAAAAGCAGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTTGATAGTGCTAACCACCTaGACCACTCCCACCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNGKSRPEKRIPWVKATLIVLTT*TTPTPV Trigger: CACTGGGGTGGGAGTGGTCAAGGTGGTTAGCACTAT...CAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCCATTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | CTCCCTTCCTCAGAGGCTGCACTTGAGAAGCAGGCCTCCTGCTGTGCGCCTGAGAAGTTCATATTGATGTaGAGGTTCACAATGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPSSEAALEKQASCCAPEKFILM*RFTMPM Trigger: CATGGGCATTGTGAACCTCAACATCAATATGAACTT...CTCAGGCGCACAGCAGGAGGCCTGCTTCTCAAGTGCAGCCTCTGAGGAAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | TGGGTCCCAGACCAATTGAAAATGCAGCCACATAAACAAGCAAGCTaGCCAGGGACAGCCATTTGTAAGCAGCTGGGACGACTGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WVPDQLKMQPHKQAS*PGTAICKQLGRLQC Trigger: ACACTGCAGTCGTCCCAGCTGCTTACAAATGGCTGTCCCTGGCCAGCTTGCTTGTTTATGTGGCTGCATTTTCAATTGGTCTGGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATTGGCTTCTGCAGATGTaGGTGAAGTTCATATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNWLLQM*VKFILM Trigger: CATCAATATGAACTTCACCAACATCTGCAGAAGCCA...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | GGGTCACCTGTGAGGCCACTGTCTGGCAGCTTCCTGGGCAGTCCCCACAAAAATTCACATAGTTCGCCTTaGCTAGCTCCACTGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: GSPVRPLSGSFLGSPHKNSHSSP*LAPLIF Trigger: AAATATCAGTGGAGCTAGCAAAGGCGAACTATGTGA...ATTTTTGTGGGGACTGCCCAGGAAGCTGCCAGACAGTGGCCTCACAGGTGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 90 bp | AAAGATCTCACTAAGCACCAACCAAGGCATGGGTCCCAGACCAATTaGAAATGCAGCCACATAAACAAGCAAGCTGGCCAGGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KDLTKHQPRHGSQTN*KCSHINKQAGQGQP Trigger: TGGCTGTCCCTGGCCAGCTTGCTTGTTTATGTGGCTGCATTTTCAATTGGTCTGGGACCCATGCCTTGGTTGGTGCTTAGTGAGATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | CATGACAGTGAGGAGAGAACATGGCAGAGACCCTGTAAGTCCTGCCACTGTGCCGTTTTTGAAGCTGTGTaGGCACTAATTCTTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HDSEERTWQRPCKSCHCAVFEAV*ALILPG Trigger: ACCAGGAAGAATTAGTGCCAACACAGCTTCAAAAAC...GGCACAGTGGCAGGACTTACAGGGTCTCTGCCATGTTCTCTCCTCACTGTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | ACCAGGAAACGAGGACTTGGGGGAAGAAAGTACATCGCTATTGCTTaGAGAACTCCCAGGGGGATCACAAGGCCAAACATATACTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRKRGLGGRKYIAIA*RTPRGITRPNIYFQ Trigger: TTGGAAGTATATGTTTGGCCTTGTGATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCGTTTCCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 90 bp | CATCACCAGGAAACGAGGACTTGGGGGAAGAAAGTACATCGCTATTaGTTGCAGAACTCCCAGGGGGATCACAAGGCCAAACATATACTT | + |
|
Preference number: 5 (lower is better) Translates to: HHQETRTWGKKVHRY*LQNSQGDHKAKHIL Trigger: AAGTATATGTTTGGCCTTGTGATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCGTTTCCTGGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS-3UTR CAA 90 bp | TCAAATGGAAAAAGCAGGCCAGAGAAGCGCATCCCGTGGGTAAAAGCCACCTTGTGGGTCCCAGACCAATaGAAAATGCAGCCACATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SNGKSRPEKRIPWVKATLWVPDQ*KMQPHK Trigger: TTTATGTGGCTGCATTTTCAATTGGTCTGGGACCCA...CAAGGTGGCTTTTACCCACGGGATGCGCTTCTCTGGCCTGCTTTTTCCATTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | ACAATCATCAGCTCATTCAACGACACAAGAAGTCCTCTTCTGTGTTaGGGGGCAATTTCCGCAATGTACACACACGTGGCAATGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TIISSFNDTRSPLLC*GAISAMYTHVAMED Trigger: GTCTTCCATTGCCACGTGTGTGTACATTGCGGAAATTGCCCCCCAACACAGAAGAGGACTTCTTGTGTCGTTGAATGAGCTGATGATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 90 bp | GAAGTTCATATTGATGTTGAGGTTCACAATGCCCATGGTCAACAGTaGAGCGGACATCACGGAGGAGCCAATACAGAGGAAGGTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVHIDVEVHNAHGQQ*SGHHGGANTEEGFA Trigger: AGCAAAACCTTCCTCTGTATTGGCTCCTCCGTGATGTCCGCTTCACTGTTGACCATGGGCATTGTGAACCTCAACATCAATATGAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 90 bp | AGCCAGCGATGCCAGACTCATGATTGTGTATATGAAGCATACCCATaGCAAACCAATAAGATCAGTCACTGTCAGAAATGTCAAAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQRCQTHDCVYEAYP*QTNKISHCQKCQRD Trigger: ATCTCTTTGACATTTCTGACAGTGACTGATCTTATTGGTTTGTCATGGGTATGCTTCATATACACAATCATGAGTCTGGCATCGCTGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 90 bp | GAACTCCCAGGGGGATCACAAGGCCAAACATATACTTCCAACCATTaGAGATGTTGGCAAATGCATAATTTGAAATATAGGCAAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELPGGSQGQTYTSNH*RCWQMHNLKYRQRE Trigger: TTCTCTTTGCCTATATTTCAAATTATGCATTTGCCAACATCTCCAATGGTTGGAAGTATATGTTTGGCCTTGTGATCCCCCTGGGAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | CGCAGGCAGGATGCCCTCCGCCGCTGGCTCCACAGCTaGCTTCGGTCTCCGCCTCTCTCCCCTTCTGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRQDALRRWLHS*LRSPPLSPSGS Trigger: TGAACCAGAAGGGGAGAGAGGCGGAGACCGAAGGCAGCTGTGGAGCCAGCGGCGGAGGGCATCCTGCCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 90 bp | CCAATGTGGTCCACAAGGAGGGTTGCTGGGATAGTGCTAACCACCTaGACCACTCCCACCCCAGTGGAGGCAAGGCTAGCTGCCTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: PMWSTRRVAGIVLTT*TTPTPVEARLAASL Trigger: CAATGAGGCAGCTAGCCTTGCCTCCACTGGGGTGGGAGTGGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | GGCCAGGGACAGCCATTTGTAAGCAGCTGGGACGACTaGAGTGTCTGTGACTCCCTGGTGTTCAGTTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQGQPFVSSWDD*SVCDSLVFSSA Trigger: AGCCGAACTGAACACCAGGGAGTCACAGACACTGCAGTCGTCCCAGCTGCTTACAAATGGCTGTCCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 72 bp | TCCACAAGGAGGGTTGCTGGGATAGTGCTAACCACCTaGACCACTCCCACCCCAGTGGAGGCAAGGCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: STRRVAGIVLTT*TTPTPVEARLA Trigger: AGCTAGCCTTGCCTCCACTGGGGTGGGAGTGGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | GTCTATGAGCACGCCTCCTGTGAGAGAGGCGAGGAATaGCCCGATGAGGAGGGAACTCACAACCATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VYEHASCERGEE*PDEEGTHNHFL Trigger: CAGGAAATGGTTGTGAGTTCCCTCCTCATCGGGGCATTCCTCGCCTCTCTCACAGGAGGCGTGCTCATAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | CTTGACCACTCCCACCCCAGTGGAGGCAAGGCTAGCTaGCTCATTGCTCTGGAAGCCAACAGACTTCAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LDHSHPSGGKAS*LIALEANRLQD Trigger: GTCTTGAAGTCTGTTGGCTTCCAGAGCAATGAGGCAGCTAGCCTTGCCTCCACTGGGGTGGGAGTGGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | GGTTTTGCTGCCAATGTGGTCCACAAGGAGGGTTGCTaGGATAGTGCTAACCACCTTGACCACTCCCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: GFAANVVHKEGC*DSANHLDHSHP Trigger: GGGGTGGGAGTGGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | AAGCAAGCTGGCCAGGGACAGCCATTTGTAAGCAGCTaGGACGACTGCAGTGTCTGTGACTCCCTGGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KQAGQGQPFVSS*DDCSVCDSLVF Trigger: GAACACCAGGGAGTCACAGACACTGCAGTCGTCCCAGCTGCTTACAAATGGCTGTCCCTGGCCAGCTTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 72 bp | GCGGACATCACGGAGGAGCCAATACAGAGGAAGGTTTaGCTGCCAATGTGGTCCACAAGGAGGGTTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADITEEPIQRKV*LPMWSTRRVAG Trigger: CCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTATTGGCTCCTCCGTGATGTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | CGGACATCACGGAGGAGCCAATACAGAGGAAGGTTTTaGTGCCAATGTGGTCCACAAGGAGGGTTGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RTSRRSQYRGRF*CQCGPQGGLLG Trigger: TCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTATTGGCTCCTCCGTGATGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | AATGCCCCGATGAGGAGGGAACTCACAACCATTTCCTaGTCGTGGCAGGTCAGGGCTAATAGCGTTCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: NAPMRRELTTIS*SWQVRANSVLI Trigger: GATCAGAACGCTATTAGCCCTGACCTGCCACGAGCAGGAAATGGTTGTGAGTTCCCTCCTCATCGGGGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | GAAGGTTTTGCTGCCAATGTGGTCCACAAGGAGGGTTaGTGGGATAGTGCTAACCACCTTGACCACTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EGFAANVVHKEG*WDSANHLDHSH Trigger: GTGGGAGTGGTCAAGGTGGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | CCGATGAGGAGGGAACTCACAACCATTTCCTGCTCGTaGCAGGTCAGGGCTAATAGCGTTCTGATCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PMRRELTTISCS*QVRANSVLICR Trigger: TCTGCAGATCAGAACGCTATTAGCCCTGACCTGCCACGAGCAGGAAATGGTTGTGAGTTCCCTCCTCATCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 72 bp | ACTCCCACCCCAGTGGAGGCAAGGCTAGCTGCCTCATaGCTCTGGAAGCCAACAGACTTCAAGACAGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TPTPVEARLAAS*LWKPTDFKTVD Trigger: ATCAACTGTCTTGAAGTCTGTTGGCTTCCAGAGCAATGAGGCAGCTAGCCTTGCCTCCACTGGGGTGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | GAGGAGCCAATACAGAGGAAGGTTTTGCTGCCAATGTaGTCCACAAGGAGGGTTGCTGGGATAGTGCTAACC | + |
|
Preference number: 6 (lower is better) Translates to: EEPIQRKVLLPM*STRRVAGIVLT Trigger: GGTTAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTATTGGCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 72 bp | GGAAACGAGGACTTGGGGGAAGAAAGTACATCGCTATaGCTTGCAGAACTCCCAGGGGGATCACAAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GNEDLGEESTSL*LAELPGGSQGQ Trigger: TTGGCCTTGTGATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCGTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 90 bp | AACAGTGAAGCGGACATCACGGAGGAGCCAATACAGAGGAAGGTTTaGCTGCCAATGTGGTCCACAAGGAGGGTTGCTGGGATAGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: NSEADITEEPIQRKV*LPMWSTRRVAGIVL Trigger: TAGCACTATCCCAGCAACCCTCCTTGTGGACCACATTGGCAGCAAAACCTTCCTCTGTATTGGCTCCTCCGTGATGTCCGCTTCACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | CGAGGACTTGGGGGAAGAAAGTACATCGCTATTGCTTaGAGAACTCCCAGGGGGATCACAAGGCCAAACATA | + |
|
Preference number: 6 (lower is better) Translates to: RGLGGRKYIAIA*RTPRGITRPNI Trigger: TATGTTTGGCCTTGTGATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | GAAACGAGGACTTGGGGGAAGAAAGTACATCGCTATTaGTTGCAGAACTCCCAGGGGGATCACAAGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ETRTWGKKVHRY*LQNSQGDHKAK Trigger: TTTGGCCTTGTGATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 72 bp | ACGAGGACTTGGGGGAAGAAAGTACATCGCTATTGCTaGCAGAACTCCCAGGGGGATCACAAGGCCAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: TRTWGKKVHRYC*QNSQGDHKAKH Trigger: ATGTTTGGCCTTGTGATCCCCCTGGGAGTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 72 bp | GTTCTTCAGTGGTGTCTGAGATCACTCTTAACTTCCTaGGGACTTTGCCTGCCGACTCCTCTTGTCCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VLQWCLRSLLTS*GLCLPTPLVPS Trigger: TGAAGGGACAAGAGGAGTCGGCAGGCAAAGTCCTCAGGAAGTTAAGAGTGATCTCAGACACCACTGAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | AGCTCATTCAACGACACAAGAAGTCCTCTTCTGTGTTaGGGGGCAATTTCCGCAATGTACACACACGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFNDTRSPLLC*GAISAMYTHVA Trigger: TGCCACGTGTGTGTACATTGCGGAAATTGCCCCCCAACACAGAAGAGGACTTCTTGTGTCGTTGAATGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | CTCCTCTTGTCCCTTCATCACCAGGAAACGAGGACTTaGGGGAAGAAAGTACATCGCTATTGCTTGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSLHHQETRT*GKKVHRYCLQN Trigger: GTTCTGCAAGCAATAGCGATGTACTTTCTTCCCCCAAGTCCTCGTTTCCTGGTGATGAAGGGACAAGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | GACCAATTGAAAATGCAGCCACATAAACAAGCAAGCTaGCCAGGGACAGCCATTTGTAAGCAGCTGGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: DQLKMQPHKQAS*PGTAICKQLGR Trigger: TCGTCCCAGCTGCTTACAAATGGCTGTCCCTGGCCAGCTTGCTTGTTTATGTGGCTGCATTTTCAATTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 72 bp | ATTGATGTTGAGGTTCACAATGCCCATGGTCAACAGTaGAGCGGACATCACGGAGGAGCCAATACAGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: IDVEVHNAHGQQ*SGHHGGANTEE Trigger: TTCCTCTGTATTGGCTCCTCCGTGATGTCCGCTTCACTGTTGACCATGGGCATTGTGAACCTCAACATCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CAA 72 bp | ACCAGTGTCAGACCTATCAGGATTCTGGTCCTCATGTaGTCCTTAGAGCGAAACAGATCCCAAAAACTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TSVRPIRILVLM*SLERNRSQKLY Trigger: GTACAGTTTTTGGGATCTGTTTCGCTCTAAGGACAACATGAGGACCAGAATCCTGATAGGTCTGACACTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS GCA 72 bp | AGTCTCAGGTATAAACAGAACAACAAAAGCCAGCGATaGCAGACTCATGATTGTGTATATGAAGCATACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLRYKQNNKSQR*QTHDCVYEAYP Trigger: TGGGTATGCTTCATATACACAATCATGAGTCTGGCATCGCTGGCTTTTGTTGTTCTGTTTATACCTGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS CCA 72 bp | GGGGGATCACAAGGCCAAACATATACTTCCAACCATTaGAGATGTTGGCAAATGCATAATTTGAAATATAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSQGQTYTSNH*RCWQMHNLKYR Trigger: CCTATATTTCAAATTATGCATTTGCCAACATCTCCAATGGTTGGAAGTATATGTTTGGCCTTGTGATCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||
| CDS TCA 72 bp | TGCCAGACTCATGATTGTGTATATGAAGCATACCCATaGCAAACCAATAAGATCAGTCACTGTCAGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: CQTHDCVYEAYP*QTNKISHCQKC Trigger: ACATTTCTGACAGTGACTGATCTTATTGGTTTGTCATGGGTATGCTTCATATACACAATCATGAGTCTGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042261.5 |
||