Pregenerated sensors for SLC2A10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027661Ensembl transcript IDs: ENSMUST00000029196.5
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGAGAGCATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATaGCAGCTGACAGTGCTGGTGAGGCCAGCTACCCAGTGTCTAGGA | + |
|
Preference number: 1 (lower is better) Translates to: TESMVTRPGLGTRRV*QLTVLVRPATQCLG Trigger: TCCTAGACACTGGGTAGCTGGCCTCACCAGCACTGTCAGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATGCTCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 90 bp | GCTCTGGGGAGCCAGCACAAGCTTAATCCAGCACACCACTGGTTATaGATGACGTATCTAGAAACAGAGAGCATGGTCACCAGGCCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: ALGSQHKLNPAHHWL*MTYLETESMVTRPG Trigger: GCCTGGCCTGGTGACCATGCTCTCTGTTTCTAGATACGTCATTCATAACCAGTGGTGTGCTGGATTAAGCTTGTGCTGGCTCCCCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 90 bp | GATGTCATTATAAACATGGCAGACAAGTCAACTCCCTGGGGAAACTaGGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACA | + |
|
Preference number: 1 (lower is better) Translates to: DVIINMADKSTPWGN*GMELNLPESPQSLT Trigger: TGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCTCAGTTTCCCCAGGGAGTTGACTTGTCTGCCATGTTTATAATGACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | CACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGGGAACCAGGAGGGTATaGCAGCTGACAGTGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHRGHPSSVEEGEGQGTRRV*QLTVLV Trigger: CACCAGCACTGTCAGCTGTCATACCCTCCTGGTTCC...CTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CAA 90 bp | CCCAGCAAGGGGACGAGGAAGGCGGAGACTCACAGCCTCTGCTGGTaGGGGATGGTGGTAAGAGACACTTCCTTCCCAGGTCCTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PSKGTRKAETHSLCW*GMVVRDTSFPGPLR Trigger: TCTCAGAGGACCTGGGAAGGAAGTGTCTCTTACCACCATCCCCAACCAGCAGAGGCTGTGAGTCTCCGCCTTCCTCGTCCCCTTGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCACTCCCTGGGGAAACTaGGGCATGGAGCTAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: THTHTEGIPAAWRREKGSTPWGN*GMELNL Trigger: AAGATTTAGCTCCATGCCTCAGTTTCCCCAGGGAGT...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCAATCCTTTAGCCTCCTaGGTGCTGGGATTACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: THTHTEGIPAAWRREKGSNPLAS*VLGLQA Trigger: TGCCTGTAATCCCAGCACTCAGGAGGCTAAAGGATT...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTAACTAACAAAGCTTCTGTCCCCAGAGCCACTCGACAGGGCCCCTTCATTCCTTCCCAGGTCCTCTaGGAAGCACTTGATGAACGC | + |
|
Preference number: 2 (lower is better) Translates to: LLTNKASVPRATRQGPFIPSQVL*EALDER Trigger: GCGTTCATCAAGTGCTTCTCAGAGGACCTGGGAAGG...AATGAAGGGGCCCTGTCGAGTGGCTCTGGGGACAGAAGCTTTGTTAGTTAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | AACAGAGAGCATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTTTGTCTCCAGTTGACTaGCCTTTACAACGCCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NREHGHQARLGNQEGMTALSPVD*PLQRPQ Trigger: TTGGGGGCGTTGTAAAGGTCAGTCAACTGGAGACAA...AGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATGCTCTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAGAGCATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTAACATCTTGGGCAAGTaGGAGGGGCTGATGAATACA | + |
|
Preference number: 2 (lower is better) Translates to: NREHGHQARLGNQEGMTANILGK*EGLMNT Trigger: TGTATTCATCAGCCCCTCCCACTTGCCCAAGATGTT...AGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATGCTCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CAA 90 bp | CTAACAAAGCTTCTGTCCCCAGAGCCACTCGACAGGGCCCCTTCATaGAGTGCTTATTATATCCCTGCTCTGAGACTTCGGTCCTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTKLLSPEPLDRAPS*SAYYIPALRLRSLW Trigger: CCACAAGGACCGAAGTCTCAGAGCAGGGATATAATAAGCACTCAATGAAGGGGCCCTGTCGAGTGGCTCTGGGGACAGAAGCTTTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | AACAGAGAGCATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTGAAGTCAGTAGCAACTaGAGTAGAAGCCACAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: NREHGHQARLGNQEGMTAEVSSN*SRSHNH Trigger: GTGATTGTGGCTTCTACTTCAGTTGCTACTGACTTC...AGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATGCTCTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR GCA 90 bp | CATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTGACAGTGCTTGCTTATTATATCCCTaGTCTGAGACTTCGGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HGHQARLGNQEGMTADSACLLYP*SETSVL Trigger: AAGGACCGAAGTCTCAGAGCAGGGATATAATAAGCA...AGCACTGTCAGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CAA 90 bp | AATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAAGAGTTaGGCAGTTATCTCTCACACCGGCAAGAGGCAGCCTCTGGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: NLPESPQSLTLKMKS*AVISHTGKRQPLGA Trigger: TGCTCCCAGAGGCTGCCTCTTGCCGGTGTGAGAGATAACTGCCAAACTCTTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR TCA 90 bp | AACACACGGATGAGTCCCTCTAATCCCTTCCTTCATTCAAAGCCTTCTGCCGAAGACACATGGGGAAACTaGGGCCAGGGTCATAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: NTRMSPSNPFLHSKPSAEDTWGN*GQGHKT Trigger: GGTCTTATGACCCTGGCCTCAGTTTCCCCATGTGTC...TTCGGCAGAAGGCTTTGAATGAAGGAAGGGATTAGAGGGACTCATCCGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAAGCAAGAGGCAGCCTCTaGGAGCAGAGGTCACTACAG | + |
|
Preference number: 2 (lower is better) Translates to: RHGAKSSREPSESHTQNEARGSL*EQRSLQ Trigger: CTGTAGTGACCTCTGCTCCCAGAGGCTGCCTCTTGC...TTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTGAGAAGCACTTGATGAACGCCACAGAGGATGTCATTATAAACATGGCAGCAGGGAGCAGGAGATaGGCTGCAGGAACCAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSEKHLMNATEDVIINMAAGSRR*AAGTNV Trigger: GACATTGGTTCCTGCAGCCCATCTCCTGCTCCCTGC...TGCCATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTTACATTCCAGAATGCTAGACTCTGGAACAGAGGTGCACTCTCTGCTAACGGCCCCTTCATTGAGTaGTTATTATATCCCTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ALTFQNARLWNRGALSANGPFIE*LLYPCS Trigger: AGAGCAGGGATATAATAAGCACTCAATGAAGGGGCC...GTTAGCAGAGAGTGCACCTCTGTTCCAGAGTCTAGCATTCTGGAATGTAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | ATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATaGCAGCTGACAGTGCTGGTGAGGCCAGCTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MVTRPGLGTRRV*QLTVLVRPATQ Trigger: CTGGGTAGCTGGCCTCACCAGCACTGTCAGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCCTGAGACTTCGGTCCTaGTGGAGTGAGAAGGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTEGIPAAWRREKGSLRLRS*WSEKGS Trigger: AGATCCCTTCTCACTCCACAAGGACCGAAGTCTCAG...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCTCCTCTGAGAAGCACTaGATGAACGCCACAGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTEGIPAAWRREKGSSSEKH*MNATED Trigger: ATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAACTGCGTGGCAGTCAGCTCTGGGGAGCCAGCACAAGCTTAATCCAGCACACCACCTGATAAACATCTaGGGCAAGTGGGAGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTAWQSALGSQHKLNPAHHLINI*GKWEGL Trigger: CAGCCCCTCCCACTTGCCCAAGATGTTTATCAGGTG...GTGTGCTGGATTAAGCTTGTGCTGGCTCCCCAGAGCTGACTGCCACGCAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR GCA 72 bp | AGCAAGGGGACGAGGAAGGCGGAGACTCACAGCCTCTaGTGGTTGGGGATGGTGGTAAGAGACACTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKGTRKAETHSL*WLGMVVRDTSF Trigger: GAAGGAAGTGTCTCTTACCACCATCCCCAACCAGCAGAGGCTGTGAGTCTCCGCCTTCCTCGTCCCCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CCA 72 bp | AGGAGTTTCAGACCCCAGCAGGCAGGGAGCAGGAGATaGGCTGCAGGAACCAATGTCCCAGCATCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RSFRPQQAGSRR*AAGTNVPASSK Trigger: CTTGGAAGATGCTGGGACATTGGTTCCTGCAGCCCATCTCCTGCTCCCTGCCTGCTGGGGTCTGAAACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CCA 72 bp | AAGGGGACGAGGAAGGCGGAGACTCACAGCCTCTGCTaGTTGGGGATGGTGGTAAGAGACACTTCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KGTRKAETHSLC*LGMVVRDTSFP Trigger: TGGGAAGGAAGTGTCTCTTACCACCATCCCCAACCAGCAGAGGCTGTGAGTCTCCGCCTTCCTCGTCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCGACAGGGCCCCTTCATaGAGTGCTTATTATATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTEGIPAAWRREKGSDRAPS*SAYYIP Trigger: AGGGATATAATAAGCACTCAATGAAGGGGCCCTGTC...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | TACAACGCCCCCAAAGAAGAGCTCTATGTAACACGGTaGGCAGAAGCCCCCAGGGCTCACGGAAGACTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YNAPKEELYVTR*AEAPRAHGRLS Trigger: GGAGAGTCTTCCGTGAGCCCTGGGGGCTTCTGCTCACCGTGTTACATAGAGCTCTTCTTTGGGGGCGTTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR GCA 72 bp | GTCCCCAGAGCCACTCGACAGGGCCCCTTCATTGAGTaGTTATTATATCCCTGCTCTGAGACTTCGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPRATRQGPFIE*LLYPCSETSVL Trigger: AAGGACCGAAGTCTCAGAGCAGGGATATAATAAGCACTCAATGAAGGGGCCCTGTCGAGTGGCTCTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CCA 72 bp | GTGCTTAGCAACCAGTCTGTAGAAGTCCCAACTGCGTaGCAGTCAGCTCTGGGGAGCCAGCACAAGCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VLSNQSVEVPTA*QSALGSQHKLN Trigger: ATTAAGCTTGTGCTGGCTCCCCAGAGCTGACTGCCACGCAGTTGGGACTTCTACAGACTGGTTGCTAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | GTGACCTCTGACCTGAGGCTCTTGCTTGTCTCCAGTTaGCTGACCTTTACAACGCCCCCAAAGAAGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTSDLRLLLVSS*LTFTTPPKKSS Trigger: AGAGCTCTTCTTTGGGGGCGTTGTAAAGGTCAGTCAACTGGAGACAAGCAAGAGCCTCAGGTCAGAGGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CAA 90 bp | AACACACGGATGAGTCCCTCTAATCCCTTCCTTCATTCAAAGCCTTCTGCCGAACACAGCCTCTGCTGGTaGGGGATGGTGGTAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NTRMSPSNPFLHSKPSAEHSLCW*GMVVRD Trigger: GTCTCTTACCACCATCCCCAACCAGCAGAGGCTGTG...TTCGGCAGAAGGCTTTGAATGAAGGAAGGGATTAGAGGGACTCATCCGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | ATAAACATGGCAGACAAGTCAACTCCCTGGGGAAACTaGGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: INMADKSTPWGN*GMELNLPESPQ Trigger: CTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCTCAGTTTCCCCAGGGAGTTGACTTGTCTGCCATGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CCA 72 bp | CTGGAAACTATTGGGGTCCTAGCACTTGTCACACGTTaGAGTCCTGCTCTTACATTCCAGAATGCTAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LETIGVLALVTR*SPALTFQNARL Trigger: GAGTCTAGCATTCTGGAATGTAAGAGCAGGACTCCAACGTGTGACAAGTGCTAGGACCCCAATAGTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | AGCCAGCACAAGCTTAATCCAGCACACCACTGGTTATaGATGACGTATCTAGAAACAGAGAGCATGGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: SQHKLNPAHHWL*MTYLETESMVT Trigger: GGTGACCATGCTCTCTGTTTCTAGATACGTCATTCATAACCAGTGGTGTGCTGGATTAAGCTTGTGCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | AACTCTGTTTTATTGATGTCCTCCTTATGTGACCTCTaGCCTGAGGCTCTTGCTTGTCTCCAGTTGACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NSVLLMSSLCDL*PEALACLQLTD Trigger: GTCAGTCAACTGGAGACAAGCAAGAGCCTCAGGTCAGAGGTCACATAAGGAGGACATCAATAAAACAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCTGAGAAGCACTTGATGAACGCCACAGAGGATGTCATTATAAACATGGCACTCAAAATGAAGAGTTaGGCAGTTATCTCTCACACC | + |
|
Preference number: 3 (lower is better) Translates to: SSEKHLMNATEDVIINMALKMKS*AVISHT Trigger: GGTGTGAGAGATAACTGCCAAACTCTTCATTTTGAG...TGCCATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR TCA 72 bp | ACAGGCATGCACCAGCACATAGGCGGTGATGAGGTTTaGGTATTGACTATTATAATTACACTGATTGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: TGMHQHIGGDEV*VLTIIITLIVY Trigger: ATAAACAATCAGTGTAATTATAATAGTCAATACTCAAACCTCATCACCGCCTATGTGCTGGTGCATGCCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCCTGCTGGCTGGCATTaGATGTGGCCAGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHRGHPSSVEEGEGQPAGWH*MWPGSW Trigger: CCAGCTGCCTGGCCACATCCAATGCCAGCCAGCAGG...CTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | CATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTGACAGTGCTCCGTGGCGACCAAGGTaGCAGCCACCTTCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGHQARLGNQEGMTADSAPWRPR*QPPSPC Trigger: GCACGGTGAAGGTGGCTGCCACCTTGGTCGCCACGG...AGCACTGTCAGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCGCTCAAGGATGGGACTaGTGGGAACTGGGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTEGIPAAWRREKGSAQGWD*WELGRQ Trigger: CTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGC...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCCGGCCCCACCAATTCTaGCACGTAGATACAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTEGIPAAWRREKGSRPHQF*HVDTAS Trigger: GCTTGCTGTATCTACGTGTCAGAATTGGTGGGGCCG...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCATTGGGCTGTCCTGTaGGCTGCTGAAACAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHRGHPSSVEEGEGQHWAVL*AAETAP Trigger: TGGTGCTGTTTCAGCAGCTCACAGGACAGCCCAATG...CTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | AACAGAGAGCATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTACCAGCACACCCCTCTaGCGCGGCCCCACCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NREHGHQARLGNQEGMTATSTPL*RGPTNS Trigger: AGAATTGGTGGGGCCGCGGCAGAGGGGTGTGCTGGT...AGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATGCTCTCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCGTGGCAGTCAGCTCTGGGGAGCCAGCACAAGCTTAATCCAGCACACCAGCCACCTTCACCGTaGCAAGCCCCACAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTAWQSALGSQHKLNPAHQPPSP*QAPQKP Trigger: TGGCTTCTGTGGGGCTTGGCACGGTGAAGGTGGCTG...GTGTGCTGGATTAAGCTTGTGCTGGCTCCCCAGAGCTGACTGCCACGCAGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CAA 72 bp | GGGACGAGGAAGGCGGAGACTCACAGCCTCTGCTGGTaGGGGATGGTGGTAAGAGACACTTCCTTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRKAETHSLCW*GMVVRDTSFPG Trigger: ACCTGGGAAGGAAGTGTCTCTTACCACCATCCCCAACCAGCAGAGGCTGTGAGTCTCCGCCTTCCTCGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | CATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTGACAGTGCTGAGAGCAGGTGCAGCTaGCCAGCCAAACATGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGHQARLGNQEGMTADSAESRCS*PAKHVP Trigger: AGGCACATGTTTGGCTGGGCAGCTGCACCTGCTCTC...AGCACTGTCAGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCGTGGCAGTCAGCTCTGGGGAGCCAGCACAAGCTTAATCCAGCACACGGGTATGCTCAAGGATaGGACTGGTGGGAACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTAWQSALGSQHKLNPAHGYAQG*DWWELG Trigger: CCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCC...GTGTGCTGGATTAAGCTTGTGCTGGCTCCCCAGAGCTGACTGCCACGCAGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | TCTCACACCGGCAAGAGGCAGCCTCTGGGAGCAGAGGTCACTACAGAAGGAAATTGTCCTGTGAGCTGCTaGAACAGCACCAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHTGKRQPLGAEVTTEGNCPVSC*NSTSPS Trigger: GCTGGGGCTGGTGCTGTTTCAGCAGCTCACAGGACA...ATTTCCTTCTGTAGTGACCTCTGCTCCCAGAGGCTGCCTCTTGCCGGTGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | CGACAGGGCCCCTTCATTGAGTGCTTATTATATCCCTGCTCTGAGACTTCGGTCAGAAGCCAGCACAGCTaGGGAGCCCCCGTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQGPFIECLLYPCSETSVRSQHS*GAPVEA Trigger: GGCTTCCACGGGGGCTCCTCAGCTGTGCTGGCTTCT...GACCGAAGTCTCAGAGCAGGGATATAATAAGCACTCAATGAAGGGGCCCTGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTAACTAACAAAGCTTCTGTCCCCAGAGCCACTCGACAGGGCCCCTTCATTTGCCGTCCTGGGCCCTaGAGAGGTCCAGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLTNKASVPRATRQGPFICRPGP*RGPESC Trigger: ACAGCTTTCTGGACCTCTTCAGGGCCCAGGACGGCA...AATGAAGGGGCCCTGTCGAGTGGCTCTGGGGACAGAAGCTTTGTTAGTTAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | AGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAAGAGGACTCTGCGGCCTaGACGGTCCACCAGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RHGAKSSREPSESHTQNEEDSAA*TVHQPR Trigger: ACGGGGCTGGTGGACCGTGCAGGCCGCAGAGTCCTC...TTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | CGACAGGGCCCCTTCATTGAGTGCTTATTATATCCCTGCTCTGAGACTTCGGTCGGATGGGTCTCTCAGTaGCTGACAGGACCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQGPFIECLLYPCSETSVGWVSQ*LTGPAV Trigger: GACAGCTGGTCCTGTCAGTCACTGAGAGACCCATCC...GACCGAAGTCTCAGAGCAGGGATATAATAAGCACTCAATGAAGGGGCCCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | AACAGAGAGCATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTGAACAAGTAGGTAGATaGAAGCCAGGCCAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NREHGHQARLGNQEGMTAEQVGR*KPGQGQ Trigger: CTGTCCTTGGCCTGGCTTTCATCTACCTACTTGTTC...AGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATGCTCTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | GCTCTTACATTCCAGAATGCTAGACTCTGGAACAGAGGTGCACTCTCTGCTAACGGCTGGCATTGGATGTaGCCAGGCAGCTGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALTFQNARLWNRGALSANGWHWM*PGSWVQ Trigger: CTGGACCCAGCTGCCTGGCCACATCCAATGCCAGCC...GTTAGCAGAGAGTGCACCTCTGTTCCAGAGTCTAGCATTCTGGAATGTAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CAA 72 bp | CTTCTGTCCCCAGAGCCACTCGACAGGGCCCCTTCATaGAGTGCTTATTATATCCCTGCTCTGAGACTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSPEPLDRAPS*SAYYIPALRLR Trigger: CCGAAGTCTCAGAGCAGGGATATAATAAGCACTCAATGAAGGGGCCCTGTCGAGTGGCTCTGGGGACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | ACACATGGGGAAACTGAGGCCAGGGTCATAAGACCATCTCCGTTACAGCCTGCTGGAGAAGAAAGAGGCTaGGTGACTGTAGGAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THGETEARVIRPSPLQPAGEERG*VTVGEQ Trigger: CTGCTCTCCTACAGTCACTCAGCCTCTTTCTTCTCC...AGCAGGCTGTAACGGAGATGGTCTTATGACCCTGGCCTCAGTTTCCCCATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | ACACTCAAAATGAAGAGTTTGGCAGTTATCTCTCACACCGGCAAGAGGCAGCCTGACCCAGAATCAGGCTaGCAGCCAGCAGCACCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKMKSLAVISHTGKRQPDPESG*QPAAPH Trigger: ATGCGGTGCTGCTGGCTGGCAGCCTGATTCTGGGTC...AGGCTGCCTCTTGCCGGTGTGAGAGATAACTGCCAAACTCTTCATTTTGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | AGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAACTTTGGGGGCTGCTGTaGCCTCTGCACCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHGAKSSREPSESHTQNELWGLL*PLHQQG Trigger: TCCCTGCTGGTGCAGAGGGCACAGCAGCCCCCAAAG...TTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGAAGCACTTGATGAACGCCACAGAGGATGTCATTATAAACATGGCAGCCAGGGCAGGGAGCTaGCCAGACCCAGAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEKHLMNATEDVIINMAARAGS*PDPESG Trigger: GCCTGATTCTGGGTCTGGCCAGCTCCCTGCCCTGGC...TGCCATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | ACACTCAAAATGAAGAGTTTGGCAGTTATCTCTCACACCGGCAAGAGGCAGCCTATGTGGCCAGGCAGCTaGGTCCAGAGTCCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLKMKSLAVISHTGKRQPMWPGS*VQSPGT Trigger: TGTCCCTGGACTCTGGACCCAGCTGCCTGGCCACAT...AGGCTGCCTCTTGCCGGTGTGAGAGATAACTGCCAAACTCTTCATTTTGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | AACACACGGATGAGTCCCTCTAATCCCTTCCTTCATTCAAAGCCTTCTGCCGAATGCCATAGCAGTCAATaGGGAAGCCCCCGACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTRMSPSNPFLHSKPSAECHSSQ*GSPRQG Trigger: CCCTTGTCGGGGGCTTCCTCATTGACTGCTATGGCA...TTCGGCAGAAGGCTTTGAATGAAGGAAGGGATTAGAGGGACTCATCCGTGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTTACATTCCAGAATGCTAGACTCTGGAACAGAGGTGCACTCTCTGCTAACTCACCAGGCCCGGTTTaGTTGTCTCCCTTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALTFQNARLWNRGALSANSPGPV*LSPFPG Trigger: TCCAGGGAAGGGAGACAAGCAAACCGGGCCTGGTGA...GTTAGCAGAGAGTGCACCTCTGTTCCAGAGTCTAGCATTCTGGAATGTAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | ACACATGGGGAAACTGAGGCCAGGGTCATAAGACCATCTCCGTTACAGCCTGCTAACTGGTCCCAGGGATaGTGTGATGACTGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: THGETEARVIRPSPLQPANWSQG*CDDWMD Trigger: ATCCATCCAGTCATCACAGCATCCCTGGGACCAGTT...AGCAGGCTGTAACGGAGATGGTCTTATGACCCTGGCCTCAGTTTCCCCATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | TCTCACACCGGCAAGAGGCAGCCTCTGGGAGCAGAGGTCACTACAGAAGGAAATGATAAAGAGGTTAGCTaGCCAGTTGAAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTGKRQPLGAEVTTEGNDKEVS*PVEAAA Trigger: TGCAGCAGCTTCAACTGGGCAGCTAACCTCTTTATC...ATTTCCTTCTGTAGTGACCTCTGCTCCCAGAGGCTGCCTCTTGCCGGTGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | AGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAAGGCTGCTGTGCCCTCTaGACCAGCAGGGAGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RHGAKSSREPSESHTQNEGCCAL*TSREKK Trigger: TTTCTTCTCCCTGCTGGTGCAGAGGGCACAGCAGCC...TTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGAAGCACTTGATGAACGCCACAGAGGATGTCATTATAAACATGGCAAAGGTCTTTGGGGGCTaGTGTGCCCTCTGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEKHLMNATEDVIINMAKVFGG*CALCTS Trigger: GCTGGTGCAGAGGGCACAGCAGCCCCCAAAGACCTT...TGCCATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGAAGCACTTGATGAACGCCACAGAGGATGTCATTATAAACATGGCAGATCCACCTGCTGGCTaGCATTGGATGTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEKHLMNATEDVIINMADPPAG*HWMWPG Trigger: GCCTGGCCACATCCAATGCCAGCCAGCAGGTGGATC...TGCCATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | GATGGCGTACGTCAATATATCCTGAGGCACACAACTGTGCCCATTCTGCAGATGGGCAGTGTTCAGAACTaGTCCCAGGGATGCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGVRQYILRHTTVPILQMGSVQN*SQGCCD Trigger: ATCACAGCATCCCTGGGACCAGTTCTGAACACTGCC...CATCTGCAGAATGGGCACAGTTGTGTGCCTCAGGATATATTGACGTACGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | AGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAACATTGCTCCCTAGGATaGCTCGTCTCCTGCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHGAKSSREPSESHTQNEHCSLG*LVSCHS Trigger: GCTATGGCAGGAGACGAGCCATCCTAGGGAGCAATG...TTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | GATGGCGTACGTCAATATATCCTGAGGCACACAACTGTGCCCATTCTGCAGATGCTTGTCTCCCTTCCCTaGAGTGGGATAAGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGVRQYILRHTTVPILQMLVSLP*SGIRSL Trigger: CAAAGACCTTATCCCACTCCAGGGAAGGGAGACAAG...CATCTGCAGAATGGGCACAGTTGTGTGCCTCAGGATATATTGACGTACGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGAAGCACTTGATGAACGCCACAGAGGATGTCATTATAAACATGGCACAAGGATGGGACTGGTaGGAACTGGGGAGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSEKHLMNATEDVIINMAQGWDW*ELGRQC Trigger: ACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTG...TGCCATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR TCA 90 bp | AGGCATGGAGCTAAATCTTCCAGAGAGCCCTCAGAGTCTCACACTCAAAATGAACTGGGTAGATCTCACTaGGGACCAACCAGGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: RHGAKSSREPSESHTQNELGRSH*GPTRLL Trigger: CAGTAACCTGGTTGGTCCTCAGTGAGATCTACCCAG...TTCATTTTGAGTGTGAGACTCTGAGGGCTCTCTGGAAGATTTAGCTCCATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTTACATTCCAGAATGCTAGACTCTGGAACAGAGGTGCACTCTCTGCTAACAGTTTAGAGGGAACCTaGTTGTCTGAAACTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALTFQNARLWNRGALSANSLEGT*LSETAA Trigger: AGCAGCAGTTTCAGACAAGCAGGTTCCCTCTAAACT...GTTAGCAGAGAGTGCACCTCTGTTCCAGAGTCTAGCATTCTGGAATGTAAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| 3UTR CAA 72 bp | AAGAGACACTTCCTTCCCAGGTCCTCTGAGAAGCACTaGATGAACGCCACAGAGGATGTCATTATAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: KRHFLPRSSEKH*MNATEDVIINM Trigger: CATGTTTATAATGACATCCTCTGTGGCGTTCATCAAGTGCTTCTCAGAGGACCTGGGAAGGAAGTGTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | GGACTCTGCGGCCTGCACGGTCCACCAGCCCCGTGGCGACCAAGGTaGCAGCCACCTTCACCGTGCCAAGCCCCACAGAAGCCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLCGLHGPPAPWRPR*QPPSPCQAPQKPAQ Trigger: CTGTGCTGGCTTCTGTGGGGCTTGGCACGGTGAAGGTGGCTGCCACCTTGGTCGCCACGGGGCTGGTGGACCGTGCAGGCCGCAGAGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 90 bp | GCCCCAGCCCCACTACAGTCCGGCTCCACATGCCGTCCTGGGCCCTaGAGAGGTCCAGAAAGCTGTACTGTGGCTTCACCAGGCCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: APAPLQSGSTCRPGP*RGPESCTVASPGPV Trigger: AACCGGGCCTGGTGAAGCCACAGTACAGCTTTCTGGACCTCTTCAGGGCCCAGGACGGCATGTGGAGCCGGACTGTAGTGGGGCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | AGCACCAGCCCCAGCCCCACTACAGTCCGGCTCCACATGCCGTCCTaGGCCCTGAAGAGGTCCAGAAAGCTGTACTGTGGCTTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STSPSPTTVRLHMPS*ALKRSRKLYCGFTR Trigger: CCTGGTGAAGCCACAGTACAGCTTTCTGGACCTCTTCAGGGCCCAGGACGGCATGTGGAGCCGGACTGTAGTGGGGCTGGGGCTGGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 90 bp | CCGCATTGCTCCCTAGGATGGCTCGTCTCCTGCCATAGCAGTCAATaGGGAAGCCCCCGACAAGGGAGGCGAGGAGAGCACCCAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHCSLGWLVSCHSSQ*GSPRQGRRGEHPRA Trigger: TGCTCTTGGGTGCTCTCCTCGCCTCCCTTGTCGGGGGCTTCCTCATTGACTGCTATGGCAGGAGACGAGCCATCCTAGGGAGCAATGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | CCACATGCCGTCCTGGGCCCTGAAGAGGTCCAGAAAGCTGTACTGTaGCTTCACCAGGCCCGGTTTGCTTGTCTCCCTTCCCTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHAVLGPEEVQKAVL*LHQARFACLPSLEW Trigger: CCACTCCAGGGAAGGGAGACAAGCAAACCGGGCCTGGTGAAGCCACAGTACAGCTTTCTGGACCTCTTCAGGGCCCAGGACGGCATGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | CCAGCGCAGACCAGCACAGCAGGGTATGCTCAAGGATGGGACTGGTaGGAACTGGGGAGGCAGTGTTCAGAACTGGTCCCAGGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAQTSTAGYAQGWDW*ELGRQCSELVPGML Trigger: CAGCATCCCTGGGACCAGTTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCTGCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CAA 90 bp | CATGGTCACCAGGCCAGGCTTGGGAACCAGGAGGGTATGACAGCTGACAGTGCTGCCAGCAGCACCGCATaGCTCCCTAGGATGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HGHQARLGNQEGMTADSAASSTA*LPRMAR Trigger: ACGAGCCATCCTAGGGAGCAATGCGGTGCTGCTGGC...AGCACTGTCAGCTGTCATACCCTCCTGGTTCCCAAGCCTGGCCTGGTGACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | CCCACCAGGAGCTCCTGTTCGAGGCAACTCAGCCCGAAGTTCAGCTaGAGTGGTAGGAGGGCACCAGATATGACGGCCAGCTCATATCCG | + |
|
Preference number: 5 (lower is better) Translates to: PTRSSCSRQLSPKFS*SGRRAPDMTASSYP Trigger: CGGATATGAGCTGGCCGTCATATCTGGTGCCCTCCTACCACTCCAGCTGAACTTCGGGCTGAGTTGCCTCGAACAGGAGCTCCTGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGGACGAGGAAGGCGGAGACTCACAGCCTCTGCTGGTTGGGGATGGTGGTAAGTGGGATAAGGTCTTaGGGGGCTGCTGTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGTRKAETHSLCWLGMVVSGIRS*GAAVPS Trigger: AGAGGGCACAGCAGCCCCCAAAGACCTTATCCCACT...TACCACCATCCCCAACCAGCAGAGGCTGTGAGTCTCCGCCTTCCTCGTCCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | AAACCAGCGCAGACCAGCACAGCAGGGTATGCTCAAGGATGGGACTaGTGGGAACTGGGGAGGCAGTGTTCAGAACTGGTCCCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPAQTSTAGYAQGWD*WELGRQCSELVPGM Trigger: CATCCCTGGGACCAGTTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCTGCGCTGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 90 bp | GGCACCGATCAGGTCGAGGAAGGAGAGGCTGATAAAGAGGTTAGCTaGCCAGTTGAAGCTGCTGCAGAAGGCGAAGGCTCTCCCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTDQVEEGEADKEVS*PVEAAAEGEGSPSD Trigger: ATCCGAGGGAGAGCCTTCGCCTTCTGCAGCAGCTTCAACTGGGCAGCTAACCTCTTTATCAGCCTCTCCTTCCTCGACCTGATCGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | AGACCAGCACAGCAGGGTATGCTCAAGGATGGGACTGGTGGGAACTaGGGAGGCAGTGTTCAGAACTGGTCCCAGGGATGCTGTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPAQQGMLKDGTGGN*GGSVQNWSQGCCDD Trigger: GTCATCACAGCATCCCTGGGACCAGTTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | TCATGCAAACCAGCGCAGACCAGCACAGCAGGGTATGCTCAAGGATaGGACTGGTGGGAACTGGGGAGGCAGTGTTCAGAACTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCKPAQTSTAGYAQG*DWWELGRQCSELVP Trigger: TGGGACCAGTTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCTGCGCTGGTTTGCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | GTTGAAGCTGCTGCAGAAGGCGAAGGCTCTCCCTCGGATCTCCGCTaGGTAGATCTCACTGAGGACCAACCAGGTTACTGGTCCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEAAAEGEGSPSDLR*VDLTEDQPGYWSKA Trigger: GGCTTTGGACCAGTAACCTGGTTGGTCCTCAGTGAGATCTACCCAGCGGAGATCCGAGGGAGAGCCTTCGCCTTCTGCAGCAGCTTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACAGAGGGCATCCCAGCAGCGTGGAGGAGGGAGAAGGGCAGCTTAGAGGGAACCTGCTaGTCTGAAACTGCTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: THTHTEGIPAAWRREKGSLEGTC*SETAAL Trigger: TAGAGCAGCAGTTTCAGACAAGCAGGTTCCCTCTAA...GCTGCCCTTCTCCCTCCTCCACGCTGCTGGGATGCCCTCTGTGTGTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | TCGGATCTCCGCTGGGTAGATCTCACTGAGGACCAACCAGGTTACTaGTCCAAAGCCAACCGAGAAGGCGCTCACGTAGACCATCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDLRWVDLTEDQPGY*SKANREGAHVDHHA Trigger: TGCATGATGGTCTACGTGAGCGCCTTCTCGGTTGGCTTTGGACCAGTAACCTGGTTGGTCCTCAGTGAGATCTACCCAGCGGAGATCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | CCAATTCTGACACGTAGATACAGCAAGCCATGGAAGACAGAGAGATaGCAAAGCCAACAGATAAACGGCCCAGGAGCAGCCAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PILTRRYSKPWKTER*QSQQINGPGAARAG Trigger: CCCTGCCCTGGCTGCTCCTGGGCCGTTTATCTGTTGGCTTTGCCATCTCTCTGTCTTCCATGGCTTGCTGTATCTACGTGTCAGAATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 90 bp | TCTGCCGCGGCCCCACCAATTCTGACACGTAGATACAGCAAGCCATaGAAGACAGAGAGATGGCAAAGCCAACAGATAAACGGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAAAPPILTRRYSKP*KTERWQSQQINGPG Trigger: TCCTGGGCCGTTTATCTGTTGGCTTTGCCATCTCTCTGTCTTCCATGGCTTGCTGTATCTACGTGTCAGAATTGGTGGGGCCGCGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CAA 90 bp | AACACACGGATGAGTCCCTCTAATCCCTTCCTTCATTCAAAGCCTTCTGCCGAAACCTGCTGGCTGGCATaGGATGTGGCCAGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTRMSPSNPFLHSKPSAETCWLA*DVARQL Trigger: CAGCTGCCTGGCCACATCCAATGCCAGCCAGCAGGT...TTCGGCAGAAGGCTTTGAATGAAGGAAGGGATTAGAGGGACTCATCCGTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTTACATTCCAGAATGCTAGACTCTGGAACAGAGGTGCACTCTCTGCTAACAGGTTAGCTGCCCAGTaGAAGCTGCTGCAGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALTFQNARLWNRGALSANRLAAQ*KLLQKA Trigger: CGCCTTCTGCAGCAGCTTCAACTGGGCAGCTAACCT...GTTAGCAGAGAGTGCACCTCTGTTCCAGAGTCTAGCATTCTGGAATGTAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS-3UTR CAA 90 bp | ACACATGGGGAAACTGAGGCCAGGGTCATAAGACCATCTCCGTTACAGCCTGCTGCTAAAGACTGTCCTTaGGTTTCAGGAACAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: THGETEARVIRPSPLQPAAKDCP*VSGTSR Trigger: CCTACTTGTTCCTGAAACCAAAGGACAGTCTTTAGC...AGCAGGCTGTAACGGAGATGGTCTTATGACCCTGGCCTCAGTTTCCCCATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 90 bp | ACTGAATACCGATGCGCTGCCTATGGCCAAAGTTTAGAGGGAACCTaGTTGTCTGAAACTGCTGCTCTATTTCAGCTAAAGACTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TEYRCAAYGQSLEGT*LSETAALFQLKTVL Trigger: AAGGACAGTCTTTAGCTGAAATAGAGCAGCAGTTTCAGACAAGCAGGTTCCCTCTAAACTTTGGCCATAGGCAGCGCATCGGTATTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | GGCCTGCACGGTCCACCAGCCCCGTGGCGACCAAGGTaGCAGCCACCTTCACCGTGCCAAGCCCCACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLHGPPAPWRPR*QPPSPCQAPQK Trigger: CTTCTGTGGGGCTTGGCACGGTGAAGGTGGCTGCCACCTTGGTCGCCACGGGGCTGGTGGACCGTGCAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | GAGAGCGCATCCAAAGAGCAGGAGGACTCTGCGGCCTaGACGGTCCACCAGCCCCGTGGCGACCAAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESASKEQEDSAA*TVHQPRGDQGG Trigger: GCCACCTTGGTCGCCACGGGGCTGGTGGACCGTGCAGGCCGCAGAGTCCTCCTGCTCTTTGGATGCGCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | CCCAGCCCCACTACAGTCCGGCTCCACATGCCGTCCTaGGCCCTGAAGAGGTCCAGAAAGCTGTACTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSPTTVRLHMPS*ALKRSRKLYCG Trigger: GCCACAGTACAGCTTTCTGGACCTCTTCAGGGCCCAGGACGGCATGTGGAGCCGGACTGTAGTGGGGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | GGCTTCACCAGGCCCGGTTTGCTTGTCTCCCTTCCCTaGAGTGGGATAAGGTCTTTGGGGGCTGCTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GFTRPGLLVSLP*SGIRSLGAAVP Trigger: GGGCACAGCAGCCCCCAAAGACCTTATCCCACTCCAGGGAAGGGAGACAAGCAAACCGGGCCTGGTGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | TTCCAGGCAGATCCACCTGCTGGCTGGCATTGGATGTaGCCAGGCAGCTGGGTCCAGAGTCCAGGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: FQADPPAGWHWM*PGSWVQSPGTQ Trigger: CTGTGTCCCTGGACTCTGGACCCAGCTGCCTGGCCACATCCAATGCCAGCCAGCAGGTGGATCTGCCTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 72 bp | TCCCTAGGATGGCTCGTCTCCTGCCATAGCAGTCAATaGGGAAGCCCCCGACAAGGGAGGCGAGGAGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLGWLVSCHSSQ*GSPRQGRRGEH Trigger: GTGCTCTCCTCGCCTCCCTTGTCGGGGGCTTCCTCATTGACTGCTATGGCAGGAGACGAGCCATCCTAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | GACCCAGAATCAGGCTGCCAGCCAGCAGCACCGCATTaGTCCCTAGGATGGCTCGTCTCCTGCCATAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: DPESGCQPAAPH*SLGWLVSCHSS Trigger: ACTGCTATGGCAGGAGACGAGCCATCCTAGGGAGCAATGCGGTGCTGCTGGCTGGCAGCCTGATTCTGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CAA 90 bp | AGGCCCGGTTTGCTTGTCTCCCTTCCCTGGAGTGGGATAAGGTCTTaGGGGGCTGCTGTGCCCTCTGCACCAGCAGGGAGAAGAAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPGLLVSLPWSGIRS*GAAVPSAPAGRRKR Trigger: CCTCTTTCTTCTCCCTGCTGGTGCAGAGGGCACAGCAGCCCCCAAAGACCTTATCCCACTCCAGGGAAGGGAGACAAGCAAACCGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 72 bp | CCACTACAGTCCGGCTCCACATGCCGTCCTGGGCCCTaGAGAGGTCCAGAAAGCTGTACTGTGGCTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PLQSGSTCRPGP*RGPESCTVASP Trigger: TGGTGAAGCCACAGTACAGCTTTCTGGACCTCTTCAGGGCCCAGGACGGCATGTGGAGCCGGACTGTAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | GTCCTGGGCCCTGAAGAGGTCCAGAAAGCTGTACTGTaGCTTCACCAGGCCCGGTTTGCTTGTCTCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLGPEEVQKAVL*LHQARFACLPS Trigger: GGAAGGGAGACAAGCAAACCGGGCCTGGTGAAGCCACAGTACAGCTTTCTGGACCTCTTCAGGGCCCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | GGGACTGGTGGGAACTGGGGAGGCAGTGTTCAGAACTaGTCCCAGGGATGCTGTGATGACTGGATGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGGNWGGSVQN*SQGCCDDWMDG Trigger: CCCATCCATCCAGTCATCACAGCATCCCTGGGACCAGTTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | CCAGCGCAGACCAGCACAGCAGGGTATGCTCAAGGATaGGACTGGTGGGAACTGGGGAGGCAGTGTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PAQTSTAGYAQG*DWWELGRQCSE Trigger: TTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCTGCGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | GCTGCAGAAGGCGAAGGCTCTCCCTCGGATCTCCGCTaGGTAGATCTCACTGAGGACCAACCAGGTTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAEGEGSPSDLR*VDLTEDQPGYW Trigger: CCAGTAACCTGGTTGGTCCTCAGTGAGATCTACCCAGCGGAGATCCGAGGGAGAGCCTTCGCCTTCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 72 bp | CACCAGCACACCCCTCTGCCGCGGCCCCACCAATTCTaGCACGTAGATACAGCAAGCCATGGAAGACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HQHTPLPRPHQF*HVDTASHGRQR Trigger: TCTCTGTCTTCCATGGCTTGCTGTATCTACGTGTCAGAATTGGTGGGGCCGCGGCAGAGGGGTGTGCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | ATCATGCAAACCAGCGCAGACCAGCACAGCAGGGTATaGTCAAGGATGGGACTGGTGGGAACTGGGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IMQTSADQHSRV*SRMGLVGTGEA Trigger: TGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCTGCGCTGGTTTGCATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | CAGACCAGCACAGCAGGGTATGCTCAAGGATGGGACTaGTGGGAACTGGGGAGGCAGTGTTCAGAACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QTSTAGYAQGWD*WELGRQCSELV Trigger: GACCAGTTCTGAACACTGCCTCCCCAGTTCCCACCAGTCCCATCCTTGAGCATACCCTGCTGTGCTGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CAA 90 bp | ATCAGGTCGAGGAAGGAGAGGCTGATAAAGAGGTTAGCTGCCCAGTaGAAGCTGCTGCAGAAGGCGAAGGCTCTCCCTCGGATCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: IRSRKERLIKRLAAQ*KLLQKAKALPRISA Trigger: AGCGGAGATCCGAGGGAGAGCCTTCGCCTTCTGCAGCAGCTTCAACTGGGCAGCTAACCTCTTTATCAGCCTCTCCTTCCTCGACCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CCA 72 bp | CGCTGGGTAGATCTCACTGAGGACCAACCAGGTTACTaGTCCAAAGCCAACCGAGAAGGCGCTCACGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RWVDLTEDQPGY*SKANREGAHVD Trigger: GTCTACGTGAGCGCCTTCTCGGTTGGCTTTGGACCAGTAACCTGGTTGGTCCTCAGTGAGATCTACCCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS CAA 72 bp | AGGAAGGAGAGGCTGATAAAGAGGTTAGCTGCCCAGTaGAAGCTGCTGCAGAAGGCGAAGGCTCTCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RKERLIKRLAAQ*KLLQKAKALPR Trigger: CCGAGGGAGAGCCTTCGCCTTCTGCAGCAGCTTCAACTGGGCAGCTAACCTCTTTATCAGCCTCTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 72 bp | TGCTGTGATGACTGGATGGATGGGTCTCTCAGTGACTaGCAGGACCAGCTGTCCTTGGTCCCCATTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CCDDWMDGSLSD*QDQLSLVPIGV Trigger: CACACCAATGGGGACCAAGGACAGCTGGTCCTGTCAGTCACTGAGAGACCCATCCATCCAGTCATCACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | AACTGGGGAGGCAGTGTTCAGAACTGGTCCCAGGGATaGTGTGATGACTGGATGGATGGGTCTCTCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: NWGGSVQNWSQG*CDDWMDGSLSD Trigger: GTCACTGAGAGACCCATCCATCCAGTCATCACAGCATCCCTGGGACCAGTTCTGAACACTGCCTCCCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | CAGGTCGAGGAAGGAGAGGCTGATAAAGAGGTTAGCTaGCCAGTTGAAGCTGCTGCAGAAGGCGAAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QVEEGEADKEVS*PVEAAAEGEGS Trigger: AGAGCCTTCGCCTTCTGCAGCAGCTTCAACTGGGCAGCTAACCTCTTTATCAGCCTCTCCTTCCTCGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | CTGAGGAGACATCCAGGCGATGGTACTGAATACCGATaGGCTGCCTATGGCCAAAGTTTAGAGGGAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRRHPGDGTEYR*AAYGQSLEGTC Trigger: GCAGGTTCCCTCTAAACTTTGGCCATAGGCAGCGCATCGGTATTCAGTACCATCGCCTGGATGTCTCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS TCA 72 bp | AAGACTGTCCTTTGGTTTCAGGAACAAGTAGGTAGATaGAAGCCAGGCCAAGGACAGCGGTCAGCCCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: KTVLWFQEQVGR*KPGQGQRSAHR Trigger: TCTATGGGCTGACCGCTGTCCTTGGCCTGGCTTTCATCTACCTACTTGTTCCTGAAACCAAAGGACAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||
| CDS GCA 72 bp | CGATGCGCTGCCTATGGCCAAAGTTTAGAGGGAACCTaGTTGTCTGAAACTGCTGCTCTATTTCAGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RCAAYGQSLEGT*LSETAALFQLK Trigger: CTTTAGCTGAAATAGAGCAGCAGTTTCAGACAAGCAGGTTCCCTCTAAACTTTGGCCATAGGCAGCGCATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029196.5 |
||