Pregenerated sensors for SLC2A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028645Ensembl transcript IDs: ENSMUST00000030398.10, ENSMUST00000134105.8, ENSMUST00000144329.8, ENSMUST00000174372.3, ENSMUST00000208090.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTTCCAGCAAGGCCAGGGCGATGGTCATGAGCACAGCACAGCCTaGCATGCCAGCCAGGCCAATGAGGTGCAGGGTCCGTCGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: PFQQGQGDGHEHSTA*HASQANEVQGPSSS Trigger: GCTGGACGACGGACCCTGCACCTCATTGGCCTGGCTGGCATGGCAGGCTGTGCTGTGCTCATGACCATCGCCCTGGCCTTGCTGGAACGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR CCA 90 bp | AGTCCGGACCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTaGCAGCTACCGCCTCCAGCGGTAAAGCCTCCTAGCTCAGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SPDPYGAEVQACGSG*QLPPPAVKPPSSEF Trigger: GAACTCTGAGCTAGGAGGCTTTACCGCTGGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGGTCCGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR GCA 90 bp | TCCTGGACTTCACTGCTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTaGCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SWTSLLAEERRPGPA*PRSVGSEEVSSSCL Trigger: CAGGCAGCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR GCA 90 bp | ATCCTAAAATGGAGTCCGGACCCCTATGGTGCCGAGGTCCAGGCCTaGGGAAGTGGGTGGCAGCTACCGCCTCCAGCGGTAAAGCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ILKWSPDPYGAEVQA*GSGWQLPPPAVKPP Trigger: AGGAGGCTTTACCGCTGGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGGTCCGGACTCCATTTTAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR GCA 90 bp | GTCATGAGCACAGCACAGCCTGCCATGCCAGCCAGGCCAATGAGGTaGAGGGTCCGTCGTCCAGCTCGCTCTACAACAAACAGCGACACC | + |
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Preference number: 1 (lower is better) Translates to: VMSTAQPAMPARPMR*RVRRPARSTTNSDT Trigger: GGTGTCGCTGTTTGTTGTAGAGCGAGCTGGACGACGGACCCTGCACCTCATTGGCCTGGCTGGCATGGCAGGCTGTGCTGTGCTCATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR TCA 90 bp | GGATGGGCTGGCGGTAGGCGGGTGAGCGGAACAGCTCCAAGATGGTaGCCTTCTTCTCCCGCATCATCTGCCGACCCTCTTCTTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: GWAGGRRVSGTAPRW*PSSPASSADPLLSS Trigger: AGATGAAAGAAGAGGGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCTTGGAGCTGTTCCGCTCACCCGCCTACCGCCAGCCCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR CCA 90 bp | TTCTGGAGCCATCAAAGTCCTGAATATCCTCCTGGACTTCACTGCTaGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCG | + |
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Preference number: 1 (lower is better) Translates to: FWSHQSPEYPPGLHC*LRKGAQARLARDLS Trigger: CGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGGACTTTGATGGCTCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR CCA 90 bp | ATAGGTCCAGCCCTACAGATTAGCTTGGCAAAGAAGGCAAGTGTCTaGACAGGGCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGG | + |
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Preference number: 1 (lower is better) Translates to: IGPALQISLAKKASV*TGRGPHPQALGQSR Trigger: CCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGCCCTGTCCAGACACTTGCCTTCTTTGCCAAGCTAATCTGTAGGGCTGGACCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR CCA 90 bp | GCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTTTGTGTaGCCCTCAGTGCACAGGAGACTAGAACCTGGCAGCCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AVKFSASEVLLMVFV*PSVHRRLEPGSPAW Trigger: CCAGGCTGGGCTGCCAGGTTCTAGTCTCCTGTGCACTGAGGGCCACACAAACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR GCA 90 bp | AAATTCTGGAGCCATCAAAGTCCTGAATATCCTCCTGGACTTCACTaGTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: KFWSHQSPEYPPGLH*WLRKGAQARLARDL Trigger: CAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGGACTTTGATGGCTCCAGAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR CCA 90 bp | TTGAGTGGTTGGGTAGGAAGAGACAGGAATGGGCGAATCCTAAAATaGAGTCCGGACCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: LSGWVGRDRNGRILK*SPDPYGAEVQACGS Trigger: ACTTCCGCAGGCCTGGACCTCGGCACCATAGGGGTCCGGACTCCATTTTAGGATTCGCCCATTCCTGTCTCTTCCTACCCAACCACTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR TCA 90 bp | GCAGCAGTCTTGCTTTCATTAAAAATTCTGGAGCCATCAAAGTCCTaGATATCCTCCTGGACTTCACTGCTGGCTGAGGAAAGGCGCCCA | + |
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Preference number: 1 (lower is better) Translates to: AAVLLSLKILEPSKS*ISSWTSLLAEERRP Trigger: TGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGGACTTTGATGGCTCCAGAATTTTTAATGAAAGCAAGACTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR CCA 90 bp | CTCCAGTGCTTCCAACTGGTCTCAGGCAAGGAAAGATTAATTGAGTaGTTGGGTAGGAAGAGACAGGAATGGGCGAATCCTAAAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: LQCFQLVSGKERLIE*LGRKRQEWANPKME Trigger: CTCCATTTTAGGATTCGCCCATTCCTGTCTCTTCCTACCCAACCACTCAATTAATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCCCAGGCCTGCGGAAGTaGGTGGCAGCTACCGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KAPRPGLPEICRFGRGLIPGLRK*VAATAS Trigger: GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGG...GATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAAGGCCGGGCTGGGTGTaGGGCTCCTCACACTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LAEERRPGPACPRSVGSERPGWV*GSSHLG Trigger: TCCCAAGTGTGAGGAGCCCCACACCCAGCCCGGCCT...TTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTGCCAGCCAGGCCAATaGGGTGCAGGGTCCGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: KAPRPGLPEICRFGRGLICQPGQ*GAGSVV Trigger: GACGACGGACCCTGCACCTCATTGGCCTGGCTGGCA...GATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGGCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACGACTTCACTGCTGGCTaGGGAAAGGCGCCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GQGVVPTLRHWANQGEDYDFTAG*GKAPRP Trigger: GGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTC...GTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGCCCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCCCAGGGCGATGGTCATaGGCACAGCACAGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: KAPRPGLPEICRFGRGLIPGRWS*AQHSLP Trigger: TGGCAGGCTGTGCTGTGCTCATGACCATCGCCCTGG...GATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCTCACACTTGGGAGTCCGCCCCCAGAGGGTGGAAGAGCTCCTCGGGTGCTCCCTGCACTCCAGTaGTTCCAACTGGTCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GLLTLGSPPPEGGRAPRVLPALQ*FQLVSG Trigger: GCCTGAGACCAGTTGGAAGCACTGGAGTGCAGGGAG...CACCCGAGGAGCTCTTCCACCCTCTGGGGGCGGACTCCCAAGTGTGAGGAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTGGCAGCTACCGCCTCCACAGCTCCAAGATGGTaGCCTTCTTCTCCCGCATCA | + |
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Preference number: 2 (lower is better) Translates to: PLWCRGPGLRKWVAATASTAPRW*PSSPAS Trigger: TGATGCGGGAGAAGAAGGTCACCATCTTGGAGCTGT...GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCGTTCCAGCAAGGCCAGGGCGATGGTCATGAGCACAGCACAGCCTGCCATGCTGGCGGTAGGCGGGTaGGCGGAACAGCTCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SRSSKARAMVMSTAQPAMLAVGG*AEQLQD Trigger: ATCTTGGAGCTGTTCCGCTCACCCGCCTACCGCCAG...CATGGCAGGCTGTGCTGTGCTCATGACCATCGCCCTGGCCTTGCTGGAACGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | GCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACAGTGTGGGCCGAGGTCCAGGCCTaGGGAAGTGGGTGGCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: AWSPPSGTGPIKVKTTVWAEVQA*GSGWQL Trigger: TAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGC...CCACACTGTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | CGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCCGATACCGGAGCCGATaGTGGCGTACACAGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RPGPACPRSVGSEEVSSSRYRSR*WRTQAA Trigger: AGCAGCCTGTGTACGCCACCATCGGCTCCGGTATCG...GCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGGGGGCTCCTCACACTTaGGAGTCCGCCCCCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ARDLSVRKRSHLAACAPEGAPHT*ESAPRG Trigger: CCCTCTGGGGGCGGACTCCCAAGTGTGAGGAGCCCC...CTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | CATGGTGTTTGTGTGGCCCTCAGTGCACAGGAGACTAGAACCTGGCAGCCCAGCGACTTCACTGCTGGCTaGGGAAAGGCGCCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: HGVCVALSAQETRTWQPSDFTAG*GKAPRP Trigger: GGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTC...GCTGGGCTGCCAGGTTCTAGTCTCCTGTGCACTGAGGGCCACACAAACACCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGGCAGCACCACAGCGATaGGGATGGGCTGGCGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: ARDLSVRKRSHLAACAPEAAPQR*GWAGGR Trigger: CCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGC...CTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCCTCACACTTGGGAGTCCGCCCCCAGAGGGTGGAAGAGCTCCTCGGGTGGCCCACAATGAAGTTTaGGGTCCAGTTGGAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLLTLGSPPPEGGRAPRVAHNEV*GPVGEA Trigger: GGCTTCTCCAACTGGACCTCAAACTTCATTGTGGGC...CACCCGAGGAGCTCTTCCACCCTCTGGGGGCGGACTCCCAAGTGTGAGGAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAAGGCTGCTGCACACCTaGCTTCTCGAAGATGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: LAEERRPGPACPRSVGSERLLHT*LLEDAR Trigger: ACGAGCATCTTCGAGAAGGCAGGTGTGCAGCAGCCT...TTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCCGCCCCCAGAGGGTGGAAGAGCTCCTCGGGTGTCTTGTCACTTTGGCTGGGCGTACACAGGCTGCTaGACACCTGCCTTCTCGAAG | + |
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Preference number: 2 (lower is better) Translates to: SPPPEGGRAPRVSCHFGWAYTGC*TPAFSK Trigger: CTTCGAGAAGGCAGGTGTGCAGCAGCCTGTGTACGC...CCAGCCAAAGTGACAAGACACCCGAGGAGCTCTTCCACCCTCTGGGGGCGGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | CGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTCATCTAGCTGCCTGTaGTCCAGAGAGATCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RPGPACPRSVGSEEVSSSSSSCL*SREILG Trigger: CCCAAGGATCTCTCTGGAGCACAGGCAGCTAGATGA...GCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR CAA 90 bp | CCAGCTCGCTCTACAACAAACAGCGACACCACAGTGAAGGCCGTGTaGACGATACCGGAGCCGATGGTGGCGTACACAGGCTGCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: PARSTTNSDTTVKAV*TIPEPMVAYTGCCT Trigger: TGTGCAGCAGCCTGTGTACGCCACCATCGGCTCCGGTATCGTCAACACGGCCTTCACTGTGGTGTCGCTGTTTGTTGTAGAGCGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | CGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTTCTCCCGCATCATCTaGCGACCCTCTTCTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: RPGPACPRSVGSEEVSSSFSRII*RPSSFI Trigger: GATGAAAGAAGAGGGTCGGCAGATGATGCGGGAGAA...GCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGAAGAAGGCAAGTGTCTaGACAGGGCGTGGTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: ARDLSVRKRSHLAACAPEKKASV*TGRGPH Trigger: GTGGGGACCACGCCCTGTCCAGACACTTGCCTTCTT...CTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGGCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACGAGCCATCAAAGTCCTaGATATCCTCCTGGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: GQGVVPTLRHWANQGEDYEPSKS*ISSWTS Trigger: TGAAGTCCAGGAGGATATTCAGGACTTTGATGGCTC...GTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGCCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | GCTATTCTGCCCTTTTCACATCCAACCCAACCTGCCTGGCCCCAATCCACAAGCCCCACCCTCAGGCACTaGGCCAATCAAGGTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: AILPFSHPTQPAWPQSTSPTLRH*ANQGED Trigger: GTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGG...GCTTGTGGATTGGGGCCAGGCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGAATATCCTCCTGGACTTCACTGCTGGCTGAGGAAAGGCGCCCAGGCCCGGAACCTGCTGCTTATCTaGATAGATCTGAGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PEYPPGLHCWLRKGAQARNLLLI*IDLSSS Trigger: ACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTT...CCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | GCACTCCAGTGCTTCCAACTGGTCTCAGGCAAGGAAAGATTAATTGAGTGGTTGGCCGAGGTCCAGGCCTaGGGAAGTGGGTGGCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: ALQCFQLVSGKERLIEWLAEVQA*GSGWQL Trigger: TAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGC...CAACCACTCAATTAATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | GCACTCCAGTGCTTCCAACTGGTCTCAGGCAAGGAAAGATTAATTGAGTGGTTGTGTCTGGACAGGGCGTaGTCCCCACCCTCAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: ALQCFQLVSGKERLIEWLCLDRA*SPPSGT Trigger: AGTGCCTGAGGGTGGGGACCACGCCCTGTCCAGACA...CAACCACTCAATTAATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCAGCCTGCGGAAGTGGGTaGCAGCTACCGCCTCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: YKYLPSIHSRAGVSVSSAACGSG*QLPPPA Trigger: CGCTGGAGGCGGTAGCTGCCACCCACTTCCGCAGGC...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCGAAAGATTAATTGAGTaGTTGGGTAGGAAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: KAPRPGLPEICRFGRGLIERLIE*LGRKRQ Trigger: CTGTCTCTTCCTACCCAACCACTCAATTAATCTTTC...GATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR TCA 90 bp | GCTATTCTGCCCTTTTCACATCCAACCCAACCTGCCTGGCCCCAATCCACAAGCCTGGGCCAATCAAGGTaGAGACTACAGTGTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: AILPFSHPTQPAWPQSTSLGQSR*RLQCGD Trigger: ATCTCCACACTGTAGTCTTCACCTTGATTGGCCCAG...GCTTGTGGATTGGGGCCAGGCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| 3UTR-3UTR GCA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCAGAGAGATCCTTGGGCTaGAGGGAGCAGGCCGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YKYLPSIHSRAGVSVSSAERSLG*REQAGL Trigger: CAGCCCGGCCTGCTCCCTGCAGCCCAAGGATCTCTC...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCAAAGATGGCCACGATGCTCAGATAGGACATCCAAGGCAGCCGTTCCAGAGGTCTCATCTAGCTaGCTGTGCTCCAGAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: QSQRWPRCSDRTSKAAVPEVSSS*LCSREI Trigger: GATCTCTCTGGAGCACAGGCAGCTAGATGAGACCTC...TGGAACGGCTGCCTTGGATGTCCTATCTGAGCATCGTGGCCATCTTTGGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | GCACTCCAGTGCTTCCAACTGGTCTCAGGCAAGGAAAGATTAATTGAGTGGTTGAGCTGCTGGGACAGCTaGAGCACCACAGCGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: ALQCFQLVSGKERLIEWLSCWDS*STTAMR Trigger: CCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCT...CAACCACTCAATTAATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTTTGTGTGGTTGATACCCGACAGCTaGTGGGACAGCTGCAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: SSAVKFSASEVLLMVFVWLIPDS*WDSCST Trigger: GGTGCTGCAGCTGTCCCAGCAGCTGTCGGGTATCAA...CCACACAAACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGAGGAAGAGACAGGAATaGGCGAATCCTAAAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ARDLSVRKRSHLAACAPERKRQE*ANPKME Trigger: CTCCATTTTAGGATTCGCCCATTCCTGTCTCTTCCT...CTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR CAA 90 bp | CCAGCGGTAAAGCCTCCTAGCTCAGAGTTCGGTATTAGTGTGTCCTaGGCCATAGGTCCAGCCCTACAGATTAGCTTGGCAAAGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PAVKPPSSEFGISVS*AIGPALQISLAKKA Trigger: TGCCTTCTTTGCCAAGCTAATCTGTAGGGCTGGACCTATGGCCAAGGACACACTAATACCGAACTCTGAGCTAGGAGGCTTTACCGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGAGATCCTTGTCCAGTGCTTCCAACTaGTCTCAGGCAAGGAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSVRKRSHLAACAPERSLSSASN*SQARKD Trigger: ATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGA...CAAGGATCTCTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGCCAAAGATGGCCACGATGCTCAGATAGGACATCCAAGGCAGCCGTTCCAGAGCCATCAAAGTCCTaGATATCCTCCTGGACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QSQRWPRCSDRTSKAAVPEPSKS*ISSWTS Trigger: TGAAGTCCAGGAGGATATTCAGGACTTTGATGGCTC...TGGAACGGCTGCCTTGGATGTCCTATCTGAGCATCGTGGCCATCTTTGGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAATATCCTCCTGGACTTCACTGCTGGCTGAGGAAAGGCGCCCAGGCCCGGTGGTGTATTTACAAGTaGGTTTGTCCAGATATACTA | + |
|
Preference number: 2 (lower is better) Translates to: PEYPPGLHCWLRKGAQARWCIYK*VCPDIL Trigger: TAGTATATCTGGACAAACCCACTTGTAAATACACCA...CCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCGTGTCTTCAGCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTAGTTGCTCCACATACTaGAAGCACATGCCCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: CPCLQQLSSQPPRSFSWCSCSTY*KHMPTM Trigger: CATTGTGGGCATGTGCTTCCAGTATGTGGAGCAACT...ACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGACACGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTGCCTAGCCTTGGACTGAATAACTCTGAATCCAGACAAATGGGGACATATGAGGTCTCATCTAGCTaGCTGTGCTCCAGAGAGATC | + |
|
Preference number: 2 (lower is better) Translates to: GVPSLGLNNSESRQMGTYEVSSS*LCSREI Trigger: GATCTCTCTGGAGCACAGGCAGCTAGATGAGACCTC...ATATGTCCCCATTTGTCTGGATTCAGAGTTATTCAGTCCAAGGCTAGGCACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGTGGTTGGGTAGGAAGAGACAGGAATGGGCGAATCCTAAAATGGAGTCCGCAAAGATGGCCACGATaGTCAGATAGGACATCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSGWVGRDRNGRILKWSPQRWPR*SDRTSK Trigger: CTTGGATGTCCTATCTGAGCATCGTGGCCATCTTTG...CGGACTCCATTTTAGGATTCGCCCATTCCTGTCTCTTCCTACCCAACCACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | ATATATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCACCCACCCTCAGGCACTaGGCCAATCAAGGTGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: IYKYLPSIHSRAGVSVSSPTLRH*ANQGED Trigger: GTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGG...TGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATTGTCTGGACAGGGCGTaGTCCCCACCCTCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHCLDRA*SPPSGT Trigger: AGTGCCTGAGGGTGGGGACCACGCCCTGTCCAGACA...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATGAGCACAGCACAGCCTaGCATGCCAGCCAGGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHEHSTA*HASQAN Trigger: ATTGGCCTGGCTGGCATGGCAGGCTGTGCTGTGCTC...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTTACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTACCTCCTGGACTTCACTaGTGGCTGAGGAAAGGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: KVTGVCWCIYKWVCPDILPPGLH*WLRKGA Trigger: GGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGG...TAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCATCCAGTGCTTCCAACTaGTCTCAGGCAAGGAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YKYLPSIHSRAGVSVSSASSASN*SQARKD Trigger: ATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGA...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTGCCTAGCCTTGGACTGAATAACTCTGAATCCAGACAAATGGGGACATATGTTACAGGAGTTTGTTaGTGTATTTACAAGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GVPSLGLNNSESRQMGTYVTGVC*CIYKWV Trigger: AACCCACTTGTAAATACACCAACAAACTCCTGTAAC...ATATGTCCCCATTTGTCTGGATTCAGAGTTATTCAGTCCAAGGCTAGGCACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR-3UTR TCA 90 bp | TACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTATAACTCTGGGCCAATCAAGGTaGAGACTACAGTGTGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YRSLLVYLQVGLSRYTITLGQSR*RLQCGD Trigger: ATCTCCACACTGTAGTCTTCACCTTGATTGGCCCAG...AGTTATAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR TCA 90 bp | TACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTATAACTAGCACATGCCCACAATaGAGTTTGAGGTCCAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: YRSLLVYLQVGLSRYTITSTCPQ*SLRSSW Trigger: CCAACTGGACCTCAAACTTCATTGTGGGCATGTGCT...AGTTATAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | TACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTATAACTCCACAAAGCCAAAGATaGCCACGATGCTCAGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: YRSLLVYLQVGLSRYTITPQSQR*PRCSDR Trigger: CCTATCTGAGCATCGTGGCCATCTTTGGCTTTGTGG...AGTTATAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATCTGCCTTCTCGAAGATaGTCGTTGAGTAGTAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHLPSRR*SLSSRT Trigger: TGTTCTACTACTCAACGAGCATCTTCGAGAAGGCAG...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATAGGATTCCTATCTTCACTTTCAAGATAGTGTTGAAGCTTGCGCATCGAGAAAGATTAATTGAGTaGTTGGGTAGGAAGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: KDRIPIFTFKIVLKLAHRERLIE*LGRKRQ Trigger: CTGTCTCTTCCTACCCAACCACTCAATTAATCTTTC...TCGATGCGCAAGCTTCAACACTATCTTGAAAGTGAAGATAGGAATCCTATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATTGGTGTATTTACAAGTaGGTTTGTCCAGATATACTA | + |
|
Preference number: 2 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHWCIYK*VCPDIL Trigger: TAGTATATCTGGACAAACCCACTTGTAAATACACCA...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR GCA 72 bp | TGGAGTCCGGACCCCTATGGTGCCGAGGTCCAGGCCTaGGGAAGTGGGTGGCAGCTACCGCCTCCAGCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: WSPDPYGAEVQA*GSGWQLPPPAV Trigger: TACCGCTGGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGGTCCGGACTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR CCA 72 bp | GGACCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTaGGTGGCAGCTACCGCCTCCAGCGGTAAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GPLWCRGPGLRK*VAATASSGKAS Trigger: GGAGGCTTTACCGCTGGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR-3UTR CAA 90 bp | CCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTGGCAGCTACCGCCTCCAGCTCCTCGGGTGTCTaGTCACTTTGGCTGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PLWCRGPGLRKWVAATASSSSGV*SLWLAP Trigger: GGGTGCCAGCCAAAGTGACAAGACACCCGAGGAGCT...GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR CCA 72 bp | CCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTaGCAGCTACCGCCTCCAGCGGTAAAGCCTCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PYGAEVQACGSG*QLPPPAVKPPS Trigger: GCTAGGAGGCTTTACCGCTGGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR CCA 72 bp | GGGGCTCCTCACACTTGGGAGTCCGCCCCCAGAGGGTaGAAGAGCTCCTCGGGTGTCTTGTCACTTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAPHTWESAPRG*KSSSGVLSLWL Trigger: CAGCCAAAGTGACAAGACACCCGAGGAGCTCTTCCACCCTCTGGGGGCGGACTCCCAAGTGTGAGGAGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR GCA 72 bp | TCACTGCTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTaGCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLAEERRPGPA*PRSVGSEEVSS Trigger: AGATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| 3UTR TCA 72 bp | GGCGGTAGGCGGGTGAGCGGAACAGCTCCAAGATGGTaGCCTTCTTCTCCCGCATCATCTGCCGACCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGRRVSGTAPRW*PSSPASSADPL Trigger: AAGAGGGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCTTGGAGCTGTTCCGCTCACCCGCCTACCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR TCA 72 bp | CACCACAGCGATGAGGATGGGCTGGCGGTAGGCGGGTaGGCGGAACAGCTCCAAGATGGTGACCTTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HHSDEDGLAVGG*AEQLQDGDLLL Trigger: GAGAAGAAGGTCACCATCTTGGAGCTGTTCCGCTCACCCGCCTACCGCCAGCCCATCCTCATCGCTGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTCCTTCTCATGGTGTTaGTGTGGCCCTCAGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KAPRPGLPEICRFGRGLISFSWC*CGPQCT Trigger: TGTGCACTGAGGGCCACACAAACACCATGAGAAGGA...GATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR GCA 72 bp | AGCCATCAAAGTCCTGAATATCCTCCTGGACTTCACTaGTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHQSPEYPPGLH*WLRKGAQARLA Trigger: GGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGGACTTTGATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR GCA 72 bp | ATCCCCAGCCACTGGACGGTCACAGCCATGCTATTCTaGCCTTTTCACATCCAACCCAACCTGCCTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: IPSHWTVTAMLF*PFHIQPNLPGP Trigger: GGGGCCAGGCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGCATGGCTGTGACCGTCCAGTGGCTGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR CCA 72 bp | CATCAAAGTCCTGAATATCCTCCTGGACTTCACTGCTaGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: HQSPEYPPGLHC*LRKGAQARLAR Trigger: TCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGGACTTTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | CGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCGCCCTACAGATTAGCTaGGCAAAGAAGGCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RPGPACPRSVGSEEVSSSALQIS*AKKASV Trigger: GACACTTGCCTTCTTTGCCAAGCTAATCTGTAGGGC...GCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR GCA 72 bp | CTGCCAGGATCCCCAGCCACTGGACGGTCACAGCCATaGTATTCTGCCCTTTTCACATCCAACCCAACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPGSPATGRSQP*YSALFTSNPTC Trigger: GCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGCATGGCTGTGACCGTCCAGTGGCTGGGGATCCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR CCA 72 bp | TGGGTAGGAAGAGACAGGAATGGGCGAATCCTAAAATaGAGTCCGGACCCCTATGGTGCCGAGGTCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WVGRDRNGRILK*SPDPYGAEVQA Trigger: GGCCTGGACCTCGGCACCATAGGGGTCCGGACTCCATTTTAGGATTCGCCCATTCCTGTCTCTTCCTACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR TCA 72 bp | CGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTaGAGACTACAGTGTGGAGATAGGAGAGTGGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RGPHPQALGQSR*RLQCGDRRVAD Trigger: ATCAGCCACTCTCCTATCTCCACACTGTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGGGCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACTCTCGAAGATGCTCGTaGAGTAGTAGAACACAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GQGVVPTLRHWANQGEDYSRRCS*SSRTQH Trigger: ATGCTGTGTTCTACTACTCAACGAGCATCTTCGAGA...GTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGCCCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTCTGCCCTTTTCACATCCAACCCAACCTGCCTGGCCCCAATCCACAAGCGGTATTAGTGTGTCCTaGGCCATAGGTCCAGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: AILPFSHPTQPAWPQSTSGISVS*AIGPAL Trigger: TAGGGCTGGACCTATGGCCAAGGACACACTAATACC...GCTTGTGGATTGGGGCCAGGCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR TCA 72 bp | AGGCTGCTGCACACCTGCCTTCTCGAAGATGCTCGTTaGGTAGTAGAACACAGCATTGATACCCGACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLLHTCLLEDAR*VVEHSIDTRQL Trigger: CAGCTGTCGGGTATCAATGCTGTGTTCTACTACTCAACGAGCATCTTCGAGAAGGCAGGTGTGCAGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCGTGTCTTCAGCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTGGTATTAGTGTGTCCTaGGCCATAGGTCCAGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: CPCLQQLSSQPPRSFSWCGISVS*AIGPAL Trigger: TAGGGCTGGACCTATGGCCAAGGACACACTAATACC...ACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGACACGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR GCA 72 bp | CCATGCTATTCTGCCCTTTTCACATCCAACCCAACCTaGCTGGCCCCAATCCACAAGCATTTGAAACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PCYSALFTSNPT*LAPIHKHLKPS Trigger: ACTTGGTTTCAAATGCTTGTGGATTGGGGCCAGGCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTCTGCCCTTTTCACATCCAACCCAACCTGCCTGGCCCCAATCCACAAGCAGTTACAGGAGTTTGTaGGTGTATTTACAAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AILPFSHPTQPAWPQSTSSYRSL*VYLQVG Trigger: ACCCACTTGTAAATACACCAACAAACTCCTGTAACT...GCTTGTGGATTGGGGCCAGGCAGGTTGGGTTGGATGTGAAAAGGGCAGAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR-3UTR CAA 90 bp | ATATATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAACAGTGAAGGCCGTGTaGACGATACCGGAGCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: IYKYLPSIHSRAGVSVSSTVKAV*TIPEPM Trigger: CATCGGCTCCGGTATCGTCAACACGGCCTTCACTGT...TGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCAGCCCTACAGATTAGCTaGGCAAAGAAGGCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: YKYLPSIHSRAGVSVSSAALQIS*AKKASV Trigger: GACACTTGCCTTCTTTGCCAAGCTAATCTGTAGGGC...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR CCA 72 bp | TTCCAACTGGTCTCAGGCAAGGAAAGATTAATTGAGTaGTTGGGTAGGAAGAGACAGGAATGGGCGAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FQLVSGKERLIE*LGRKRQEWANP Trigger: AGGATTCGCCCATTCCTGTCTCTTCCTACCCAACCACTCAATTAATCTTTCCTTGCCTGAGACCAGTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR CCA 72 bp | GCTATCAGTCTGAAAGTAGCCTATGAAAATGCTGACTaGAGTTTTCCTCCGGGTCAGAGGTCAAACAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AISLKVAYENAD*SFPPGQRSNRF Trigger: AAACCTGTTTGACCTCTGACCCGGAGGAAAACTCCAGTCAGCATTTTCATAGGCTACTTTCAGACTGATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR TCA 72 bp | TTGCTTTCATTAAAAATTCTGGAGCCATCAAAGTCCTaGATATCCTCCTGGACTTCACTGCTGGCTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLSLKILEPSKS*ISSWTSLLAEE Trigger: TTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGGACTTTGATGGCTCCAGAATTTTTAATGAAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTATAACTCACAAAGAGCTCCTTTaGTTTGGGGAACAGGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: YRSLLVYLQVGLSRYTITHKELL*FGEQGM Trigger: CATACCCTGTTCCCCAAACAAAAGGAGCTCTTTGTG...AGTTATAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGCACAGCACAGCCTaGCATGCCAGCCAGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAEERRPGPACPRSVGSEEHSTA*HASQAN Trigger: ATTGGCCTGGCTGGCATGGCAGGCTGTGCTGTGCTC...TTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR TCA 90 bp | CCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTGGCAGCTACCGCCTCCAGCACATGCCCACAATaGAGTTTGAGGTCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWCRGPGLRKWVAATASSTCPQ*SLRSSW Trigger: CCAACTGGACCTCAAACTTCATTGTGGGCATGTGCT...GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | CCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTGGCAGCTACCGCCTCCTCCTCAATAACCTTCTaGGGGGCGTTGATGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLWCRGPGLRKWVAATASSSITF*GALMTP Trigger: TGGTGTCATCAACGCCCCCCAGAAGGTTATTGAGGA...GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR CCA 90 bp | GCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGTCCGCCCCCAGAGGGTaGAAGAGCTCCTCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARDLSVRKRSHLAACAPESAPRG*KSSSGV Trigger: GACACCCGAGGAGCTCTTCCACCCTCTGGGGGCGGA...CTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAGATCTCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR TCA 90 bp | TCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGAGATCCTTGGGCGCAGCACCACAGCGATaGGGATGGGCTGGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRKRSHLAACAPERSLGAAPQR*GWAGGR Trigger: CCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGC...GCCCAAGGATCTCTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGCCCACAATGAAGTTTaGGGTCCAGTTGGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAEERRPGPACPRSVGSEAHNEV*GPVGEA Trigger: GGCTTCTCCAACTGGACCTCAAACTTCATTGTGGGC...TTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR TCA 90 bp | GCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACAGTGTGGATAGCCGAACTGCAGTaGTCCGAGCACTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AWSPPSGTGPIKVKTTVWIAELQ*SEHCSS Trigger: GGAGGAGCAGTGCTCGGATCACTGCAGTTCGGCTAT...CCACACTGTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR GCA 90 bp | CATGGTGTTTGTGTGGCCCTCAGTGCACAGGAGACTAGAACCTGGCAGCCCAGCAGCTGCTGGGACAGCTaGAGCACCACAGCGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGVCVALSAQETRTWQPSSCWDS*STTAMR Trigger: CCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCT...GCTGGGCTGCCAGGTTCTAGTCTCCTGTGCACTGAGGGCCACACAAACACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAATCCTCAATAACCTTCTaGGGGGCGTTGATGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAEERRPGPACPRSVGSESSITF*GALMTP Trigger: TGGTGTCATCAACGCCCCCCAGAAGGTTATTGAGGA...TTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR GCA 90 bp | GGACAGGGCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACCAGAGGCCACAAGTCTaGATTGCCCATGATGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQGVVPTLRHWANQGEDYQRPQV*IAHDGV Trigger: GACTCCATCATGGGCAATGCAGACTTGTGGCCTCTG...GTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGCCCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGAGGAAAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAATCTAAGCCAAACACCTaGGCAATAAGGATGCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LAEERRPGPACPRSVGSESKPNT*AIRMPT Trigger: CGTTGGCATCCTTATTGCCCAGGTGTTTGGCTTAGA...TTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTTTCCTCAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | GCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACAGTGTGGGGTTCATCATCAGCATaGAGTTCCGCCTGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWSPPSGTGPIKVKTTVWGSSSA*SSACQS Trigger: GCTTTGGCAGGCGGAACTCCATGCTGATGATGAACC...CCACACTGTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGCCTCTGAATTCGATGAGGGAGGTTCTCTGGAAAGGACCTGCCTGTTTATGCCAGCCAGGCCAATaGGGTGCAGGGTCCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPLNSMREVLWKGPACLCQPGQ*GAGSVV Trigger: GACGACGGACCCTGCACCTCATTGGCCTGGCTGGCA...TAAACAGGCAGGTCCTTTCCAGAGAACCTCCCTCATCGAATTCAGAGGCACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGAATTCGATGAGGGAGGTTCTCTGGAAAGGACCTGCCTGTTTAGTGCTCCAGGGCGATGGTCATaGGCACAGCACAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASEFDEGGSLERTCLFSAPGRWS*AQHSLP Trigger: TGGCAGGCTGTGCTGTGCTCATGACCATCGCCCTGG...AGCACTAAACAGGCAGGTCCTTTCCAGAGAACCTCCCTCATCGAATTCAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR CAA 72 bp | TCTACAACAAACAGCGACACCACAGTGAAGGCCGTGTaGACGATACCGGAGCCGATGGTGGCGTACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STTNSDTTVKAV*TIPEPMVAYTG Trigger: GCCTGTGTACGCCACCATCGGCTCCGGTATCGTCAACACGGCCTTCACTGTGGTGTCGCTGTTTGTTGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTTTGTGTGGCTGGCGGTAGGCGGGTaGGCGGAACAGCTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSAVKFSASEVLLMVFVWLAVGG*AEQLQD Trigger: ATCTTGGAGCTGTTCCGCTCACCCGCCTACCGCCAG...CCACACAAACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | GCGTGGTCCCCACCCTCAGGCACTGGGCCAATCAAGGTGAAGACTACAGTGTGGAGTTGCTCCACATACTaGAAGCACATGCCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: AWSPPSGTGPIKVKTTVWSCSTY*KHMPTM Trigger: CATTGTGGGCATGTGCTTCCAGTATGTGGAGCAACT...CCACACTGTAGTCTTCACCTTGATTGGCCCAGTGCCTGAGGGTGGGGACCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGAATTCGATGAGGGAGGTTCTCTGGAAAGGACCTGCCTGTTTAGTGCTATAGCCGAACTGCAGTaGTCCGAGCACTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASEFDEGGSLERTCLFSAIAELQ*SEHCSS Trigger: GGAGGAGCAGTGCTCGGATCACTGCAGTTCGGCTAT...AGCACTAAACAGGCAGGTCCTTTCCAGAGAACCTCCCTCATCGAATTCAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTTTGTGTGGTACCGGAGCCGATGGTaGCGTACACAGGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSAVKFSASEVLLMVFVWYRSRW*RTQAAA Trigger: TGCAGCAGCCTGTGTACGCCACCATCGGCTCCGGTA...CCACACAAACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGTGGTTGGGTAGGAAGAGACAGGAATGGGCGAATCCTAAAATGGAGTCCGCGATACCGGAGCCGATaGTGGCGTACACAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGWVGRDRNGRILKWSPRYRSR*WRTQAA Trigger: AGCAGCCTGTGTACGCCACCATCGGCTCCGGTATCG...CGGACTCCATTTTAGGATTCGCCCATTCCTGTCTCTTCCTACCCAACCACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | CATGGTGTTTGTGTGGCCCTCAGTGCACAGGAGACTAGAACCTGGCAGCCCAGCCTGCCTTCTCGAAGATaGTCGTTGAGTAGTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HGVCVALSAQETRTWQPSLPSRR*SLSSRT Trigger: TGTTCTACTACTCAACGAGCATCTTCGAGAAGGCAG...GCTGGGCTGCCAGGTTCTAGTCTCCTGTGCACTGAGGGCCACACAAACACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR CAA 72 bp | CACCGTGAAGATGATGAAGACGTAGGGGCCGCACAGTaGCTCCACATACTGGAAGCACATGCCCACAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HREDDEDVGAAQ*LHILEAHAHNE Trigger: TTCATTGTGGGCATGTGCTTCCAGTATGTGGAGCAACTGTGCGGCCCCTACGTCTTCATCATCTTCACGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174372.3 |
||
| CDS-3UTR GCA 90 bp | GCACTCCAGTGCTTCCAACTGGTCTCAGGCAAGGAAAGATTAATTGAGTGGTTGACGATTCCCAGCTGGTaGAGTGTGCCTAGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQCFQLVSGKERLIEWLTIPSW*SVPRAP Trigger: TGGAGCCCTAGGCACACTGCACCAGCTGGGAATCGT...CAACCACTCAATTAATCTTTCCTTGCCTGAGACCAGTTGGAAGCACTGGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR GCA 90 bp | ATCCAACCCAACCTGCCTGGCCCCAATCCACAAGCATTTGAAACCAAGTTTCTATTGATACCCGACAGCTaGTGGGACAGCTGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IQPNLPGPNPQAFETKFLLIPDS*WDSCST Trigger: GGTGCTGCAGCTGTCCCAGCAGCTGTCGGGTATCAA...TAGAAACTTGGTTTCAAATGCTTGTGGATTGGGGCCAGGCAGGTTGGGTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCAGCCAGGCCAATGAGGTaGAGGGTCCGTCGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKYLPSIHSRAGVSVSSAARPMR*RVRRPA Trigger: AGCTGGACGACGGACCCTGCACCTCATTGGCCTGGC...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | CTGTCGGTTCGGAAGAGGTCTCATCTAGCTGCCTGTGCTCCAGAGAGATCCTTGCAAAGATGGCCACGATaGTCAGATAGGACATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVRKRSHLAACAPERSLQRWPR*SDRTSK Trigger: CTTGGATGTCCTATCTGAGCATCGTGGCCATCTTTG...CAAGGATCTCTCTGGAGCACAGGCAGCTAGATGAGACCTCTTCCGAACCGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | GGGTCAGAGGTCAAACAGGTTTTTGAGCAACAAAAGGGACACTGCCAGGATCCCGGCCACAATGAACCATaGAATAGGACCAGGGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSEVKQVFEQQKGHCQDPGHNEP*NRTRAY Trigger: GTAGGCCCTGGTCCTATTCCATGGTTCATTGTGGCC...GGGATCCTGGCAGTGTCCCTTTTGTTGCTCAAAAACCTGTTTGACCTCTGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | ATATATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCAGGACGGGGCCCCTaGCTGAACAGCTCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYKYLPSIHSRAGVSVSSAGRGP*LNSSAT Trigger: TGTGGCCGAGCTGTTCAGCCAGGGGCCCCGTCCTGC...TGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| 3UTR CAA 72 bp | AAGCCTCCTAGCTCAGAGTTCGGTATTAGTGTGTCCTaGGCCATAGGTCCAGCCCTACAGATTAGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPPSSEFGISVS*AIGPALQISLA Trigger: TGCCAAGCTAATCTGTAGGGCTGGACCTATGGCCAAGGACACACTAATACCGAACTCTGAGCTAGGAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR CCA 90 bp | ACTATAGCCATTTCTGGAGTGCCTAGCCTTGGACTGAATAACTCTGAATCCAGACCCCGACAGAGAAGATaGCCACGGAGAGAGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TIAISGVPSLGLNNSESRPRQRR*PRRETK Trigger: TTTGGTCTCTCTCCGTGGCCATCTTCTCTGTCGGGG...TCTGGATTCAGAGTTATTCAGTCCAAGGCTAGGCACTCCAGAAATGGCTATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTGCCTAGCCTTGGACTGAATAACTCTGAATCCAGACAAATGGGGACATATTCTTCAGCACACTCTTaGCCCGGTTCTCCTCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GVPSLGLNNSESRQMGTYSSAHS*PGSPRY Trigger: GTAACGAGGAGAACCGGGCCAAGAGTGTGCTGAAGA...ATATGTCCCCATTTGTCTGGATTCAGAGTTATTCAGTCCAAGGCTAGGCACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCCTAGCCTTGGACTGAATAACTCTGAATCCAGACAAATGGGGACATATGCATCTCAAAGGACTTaGCCAGTTTGGAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVPSLGLNNSESRQMGTYASQRT*PVWRSP Trigger: TGGGCTTCTCCAAACTGGGCAAGTCCTTTGAGATGC...ATATGTCCCCATTTGTCTGGATTCAGAGTTATTCAGTCCAAGGCTAGGCACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATCCAGCTGGTGCAGTGTaGCTAGGGCTCCACGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHPAGAV*LGLHVE Trigger: CTCTACGTGGAGCCCTAGGCACACTGCACCAGCTGG...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGGTAAAGTTACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGCGTACACAGGCTGCTaGACACCTGCCTTCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLGKVTGVCWCIYKWVCPAYTGC*TPAFSK Trigger: CTTCGAGAAGGCAGGTGTGCAGCAGCCTGTGTACGC...TGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTAACTTTACCTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CCA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCACCACAAAGCCAAAGATaGCCACGATGCTCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKYLPSIHSRAGVSVSSAPQSQR*PRCSDR Trigger: CCTATCTGAGCATCGTGGCCATCTTTGGCTTTGTGG...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTTACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTAACGATTCCCAGCTGGTaGAGTGTGCCTAGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVTGVCWCIYKWVCPDILTIPSW*SVPRAP Trigger: TGGAGCCCTAGGCACACTGCACCAGCTGGGAATCGT...TAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR CCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATCCCCGACAGAGAAGATaGCCACGGAGAGAGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHPRQRR*PRRETK Trigger: TTTGGTCTCTCTCCGTGGCCATCTTCTCTGTCGGGG...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR TCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATACAGCTCCAAGATGGTaGCCTTCTTCTCCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHTAPRW*PSSPAS Trigger: TGATGCGGGAGAAGAAGGTCACCATCTTGGAGCTGT...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR GCA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATGCATCTCAAAGGACTTaGCCAGTTTGGAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHASQRT*PVWRSP Trigger: TGGGCTTCTCCAAACTGGGCAAGTCCTTTGAGATGC...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTTACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAGATATACTATTCTCCCGCATCATCTaGCGACCCTCTTCTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KVTGVCWCIYKWVCPDILFSRII*RPSSFI Trigger: GATGAAAGAAGAGGGTCGGCAGATGATGCGGGAGAA...TAGTATATCTGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTAACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CAA 90 bp | CCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTGGCAGCTACCGCCTCCACAGTGAAGGCCGTGTaGACGATACCGGAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLWCRGPGLRKWVAATASTVKAV*TIPEPM Trigger: CATCGGCTCCGGTATCGTCAACACGGCCTTCACTGT...GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
||
| CDS-3UTR CAA 90 bp | CCCCTATGGTGCCGAGGTCCAGGCCTGCGGAAGTGGGTGGCAGCTACCGCCTCCAAGGACTTGCCCAGTTaGGAGAAGCCCATAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PLWCRGPGLRKWVAATASKDLPS*EKPIST Trigger: TGTGCTTATGGGCTTCTCCAAACTGGGCAAGTCCTT...GGAGGCGGTAGCTGCCACCCACTTCCGCAGGCCTGGACCTCGGCACCATAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
||
| CDS-3UTR CAA 90 bp | CCTGAATATCCTCCTGGACTTCACTGCTGGCTGAGGAAAGGCGCCCAGGCCCGGAGCTCCTCGGGTGTCTaGTCACTTTGGCTGGCACCC | + |
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Preference number: 5 (lower is better) Translates to: PEYPPGLHCWLRKGAQARSSSGV*SLWLAP Trigger: GGGTGCCAGCCAAAGTGACAAGACACCCGAGGAGCT...CCGGGCCTGGGCGCCTTTCCTCAGCCAGCAGTGAAGTCCAGGAGGATATTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | AAGGCGCCCAGGCCCGGCTTGCCCGAGATCTGTCGGTTCGGAAGAGGTCTCATCTCGAAGGTTCGGCCTTaGGTCTCAGGGACTTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KAPRPGLPEICRFGRGLISKVRP*VSGTLK Trigger: CTTCAAAGTCCCTGAGACCAAAGGCCGAACCTTCGA...GATGAGACCTCTTCCGAACCGACAGATCTCGGGCAAGCCGGGCCTGGGCGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | CATGGTGTTTGTGTGGCCCTCAGTGCACAGGAGACTAGAACCTGGCAGCCCAGCAAGGACTTGCCCAGTTaGGAGAAGCCCATAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: HGVCVALSAQETRTWQPSKDLPS*EKPIST Trigger: TGTGCTTATGGGCTTCTCCAAACTGGGCAAGTCCTT...GCTGGGCTGCCAGGTTCTAGTCTCCTGTGCACTGAGGGCCACACAAACACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGAATTCGATGAGGGAGGTTCTCTGGAAAGGACCTGCCTGTTTAGTGCTTTCTCCTCGTTACGATaGATGAGCAGGAAGCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: ASEFDEGGSLERTCLFSAFSSLR*MSRKRG Trigger: CCCCCGCTTCCTGCTCATCAATCGTAACGAGGAGAA...AGCACTAAACAGGCAGGTCCTTTCCAGAGAACCTCCCTCATCGAATTCAGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | TGTCCGTGTCTTCAGCAGTTAAGTTCTCAGCCTCCGAGGTCCTTCTCATGGTGTGCGGTGGTTCCATGTTaGATTGTAGAACTCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: CPCLQQLSSQPPRSFSWCAVVPC*IVELLN Trigger: ATTGAGGAGTTCTACAATCAAACATGGAACCACCGC...ACACCATGAGAAGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGACACGGACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| CDS-3UTR CAA 90 bp | ATTCCTATCTTCACTTTCAAGATAGTGTTGAAGCTTGCGCATCGAGGCCATCTCTTCTTCAGCACACTCTaGGCCCGGTTCTCCTCGTTA | + |
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Preference number: 5 (lower is better) Translates to: IPIFTFKIVLKLAHRGHLFFSTL*ARFSSL Trigger: TAACGAGGAGAACCGGGCCAAGAGTGTGCTGAAGAA...GAGATGGCCTCGATGCGCAAGCTTCAACACTATCTTGAAAGTGAAGATAGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | TATAAATATCTTCCATCTATACACAGCAGGGCAGGAGTGTCCGTGTCTTCAGCAAAGTTTGAGGTCCAGTaGGAGAAGCCAGCCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: YKYLPSIHSRAGVSVSSAKFEVQ*EKPATA Trigger: TGCTGTGGCTGGCTTCTCCAACTGGACCTCAAACTT...TGCTGAAGACACGGACACTCCTGCCCTGCTGTGTATAGATGGAAGATATTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | TGCTTAGGTAAAGTTACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCAAGCATCTCAAAGGACTaGCCCAGTTTGGAGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: CLGKVTGVCWCIYKWVCPSISKD*PSLEKP Trigger: GGGCTTCTCCAAACTGGGCAAGTCCTTTGAGATGCT...TGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTAACTTTACCTAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| CDS-3UTR CAA 90 bp | AAAGATAGGATTCCTATCTTCACTTTCAAGATAGTGTTGAAGCTTGCGCATCGAGGCCACAAGTCTGCATaGCCCATGATGGAGTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: KDRIPIFTFKIVLKLAHRGHKSA*PMMESK Trigger: CTTAGACTCCATCATGGGCAATGCAGACTTGTGGCC...TCGATGCGCAAGCTTCAACACTATCTTGAAAGTGAAGATAGGAATCCTATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | TGCTTAGGTAAAGTTACAGGAGTTTGTTGGTGTATTTACAAGTGGGTTTGTCCATCTCGAAGATGCTCGTaGAGTAGTAGAACACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: CLGKVTGVCWCIYKWVCPSRRCS*SSRTQH Trigger: ATGCTGTGTTCTACTACTCAACGAGCATCTTCGAGA...TGGACAAACCCACTTGTAAATACACCAACAAACTCCTGTAACTTTACCTAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS-3UTR CAA 90 bp | ATTATAAAACCTGCTGCTTATCTGAATAGATCTGAGCAGCAGTCTTGCTTTCATGCGGTGGTTCCATGTTaGATTGTAGAACTCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: IIKPAAYLNRSEQQSCFHAVVPC*IVELLN Trigger: ATTGAGGAGTTCTACAATCAAACATGGAACCACCGC...ATGAAAGCAAGACTGCTGCTCAGATCTATTCAGATAAGCAGCAGGTTTTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| CDS TCA 72 bp | GCAGTGATCCGAGCACTGCTCCTCCCACAGCCAACATaGGGCGGCCCGTCACCTTCTTGCTGCTGGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: AVIRALLLPQPT*GGPSPSCCWDP Trigger: TGGATCCCAGCAGCAAGAAGGTGACGGGCCGCCTCATGTTGGCTGTGGGAGGAGCAGTGCTCGGATCACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| CDS CAA 90 bp | TCTCGGGTCACATCGGCTGTCCCTCGAAGCTTCTTCAGCACACTCTaGGCCCGGTTCTCCTCGTTACGATTGATGAGCAGGAAGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRVTSAVPRSFFSTL*ARFSSLRLMSRKRG Trigger: CCCCCGCTTCCTGCTCATCAATCGTAACGAGGAGAACCGGGCCAAGAGTGTGCTGAAGAAGCTTCGAGGGACAGCCGATGTGACCCGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS CCA 72 bp | CACGGAGAGAGACCAAAGCGTGGTGAGTGTGGTGGATaGGATGGGCTCTCCGTAGCGGTGGTTCCATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HGERPKRGECGG*DGLSVAVVPCL Trigger: CAAACATGGAACCACCGCTACGGAGAGCCCATCCCATCCACCACACTCACCACGCTTTGGTCTCTCTCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030398.10 ENSMUST00000134105.8 ENSMUST00000144329.8 ENSMUST00000174372.3 ENSMUST00000208090.2 |
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| CDS GCA 72 bp | TGGGCAATAAGGATGCCAACGACGATTCCCAGCTGGTaGAGTGTGCCTAGGGCTCCACGTAGAGCTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: WAIRMPTTIPSW*SVPRAPRRAVG Trigger: ACCTACAGCTCTACGTGGAGCCCTAGGCACACTGCACCAGCTGGGAATCGTCGTTGGCATCCTTATTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030398.10 ENSMUST00000174372.3 |
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| CDS TCA 72 bp | GGCGTTGATGACACCAGTGTTATAGCCGAACTGCAGTaGTCCGAGCACTGCTCCTCCCACAGCCAACATGAG | + |
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Preference number: 6 (lower is better) Translates to: GVDDTSVIAELQ*SEHCSSHSQHE Trigger: CTCATGTTGGCTGTGGGAGGAGCAGTGCTCGGATCACTGCAGTTCGGCTATAACACTGGTGTCATCAACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030398.10 ENSMUST00000134105.8 ENSMUST00000174372.3 |
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| CDS CAA 72 bp | ACATCGGCTGTCCCTCGAAGCTTCTTCAGCACACTCTaGGCCCGGTTCTCCTCGTTACGATTGATGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSAVPRSFFSTL*ARFSSLRLMSR Trigger: CCTGCTCATCAATCGTAACGAGGAGAACCGGGCCAAGAGTGTGCTGAAGAAGCTTCGAGGGACAGCCGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS CCA 72 bp | TCTGCATTGCCCATGATGGAGTCTAAGCCAAACACCTaGGCAATAAGGATGCCAACGACGATTCCCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SALPMMESKPNT*AIRMPTTIPSW Trigger: CCAGCTGGGAATCGTCGTTGGCATCCTTATTGCCCAGGTGTTTGGCTTAGACTCCATCATGGGCAATGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030398.10 |
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| CDS CAA 72 bp | GGATGGGATGGGCTCTCCGTAGCGGTGGTTCCATGTTaGATTGTAGAACTCCTCAATAACCTTGCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GWDGLSVAVVPC*IVELLNNLAAG Trigger: CCCAGCAGCAAGGTTATTGAGGAGTTCTACAATCAAACATGGAACCACCGCTACGGAGAGCCCATCCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208090.2 |
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