Pregenerated sensors for SLC29A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050822Ensembl transcript IDs: ENSMUST00000058418.8, ENSMUST00000198728.5
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGCAGGGACTGGTACAGGGTGGTCACGGCTGGGGCCACTGTGTaGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCTCTTTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: HSRDWYRVVTAGATV*RGKCPGSAKALFGR Trigger: CCTGCCAAAGAGAGCTTTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGACCACCCTGTACCAGTCCCTGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CCA 90 bp | CGGGGAGGCGGTGCCCTGGGCGGTGAAGACAAGTTCCAGCTGTTTTaGACAACTGGGACAAGGTGGCAAGGTGGCGTTAGTGGCTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: RGGGALGGEDKFQLF*TTGTRWQGGVSGLG Trigger: TCCTAAGCCACTAACGCCACCTTGCCACCTTGTCCCAGTTGTCCAAAACAGCTGGAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR TCA 90 bp | GTGTCTGACCAAACACAGGACACGGGGAGGCGGTGCCCTGGGCGGTaGAGACAAGTTCCAGCTGTTTTGGACAACTGGGACAAGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: VSDQTQDTGRRCPGR*RQVPAVLDNWDKVA Trigger: TGCCACCTTGTCCCAGTTGTCCAAAACAGCTGGAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCCGTGTCCTGTGTTTGGTCAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CCA 90 bp | GGCGGTGAAGACAAGTTCCAGCTGTTTTGGACAACTGGGACAAGGTaGCAAGGTGGCGTTAGTGGCTTAGGAGGTGGCCAGGACCCCGCA | + |
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Preference number: 1 (lower is better) Translates to: GGEDKFQLFWTTGTR*QGGVSGLGGGQDPA Trigger: TGCGGGGTCCTGGCCACCTCCTAAGCCACTAACGCCACCTTGCCACCTTGTCCCAGTTGTCCAAAACAGCTGGAACTTGTCTTCACCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR TCA 90 bp | GAGTGGGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCATaGTGGGTAAGTTGGATGGAACAGGAAAGAAATGGGACGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: EWGGLGHEWTSAVPA*WVSWMEQERNGTSL Trigger: CAGGGACGTCCCATTTCTTTCCTGTTCCATCCAACTTACCCATCATGCAGGGACAGCTGAGGTCCACTCGTGACCTAGGCCGCCCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CCA 90 bp | GTACAGGGTGGTCACGGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCGGGGAGGCGGTGCCCTaGGCGGTGAAGACAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: VQGGHGWGHCVERQVSRLGEAVP*AVKTSS Trigger: GGAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCC...GAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGACCACCCTGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGATGGGAGTGGGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCACATGGAACCACACAGTaGGGTCACACTGAAGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GGWEWGGLGHEWTSAVPAHGTTQ*GHTEGS Trigger: ACTCCCTTCAGTGTGACCCCACTGTGTGGTTCCATG...TGCAGGGACAGCTGAGGTCCACTCGTGACCTAGGCCGCCCCACTCCCATCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCATGATGGGTAAGTTGTTGACGCTTTATGTGTaGGGGTGCAGGGGTAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRPRSRVDLSCPCMMGKLLTLYV*GCRGRA Trigger: AGCCCTACCCCTGCACCCGCACACATAAAGCGTCAA...CAACTTACCCATCATGCAGGGACAGCTGAGGTCCACTCGTGACCTAGGCCGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CAA 90 bp | CCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCATGATGGGTAAGTaGGATGGAACAGGAAAGAAATGGGACGTCCCTGTTAGCCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PRSRVDLSCPCMMGK*DGTGKKWDVPVSRG Trigger: GCCACGGCTAACAGGGACGTCCCATTTCTTTCCTGTTCCATCCAACTTACCCATCATGCAGGGACAGCTGAGGTCCACTCGTGACCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCTCTTCCCCTGACCAGTAAATaGAAACCACATCGAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: GWGHCVERQVSRLSKSSLPLTSK*KPHRRP Trigger: TGGTCTTCGATGTGGTTTTCATTTACTGGTCAGGGG...AAGAGAGCTTTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTATGACTACAGGAGGCCTGTGTATGAGGAATGAGTTTTCCAGACTTGACGCACTGAGGCAGGGGTaGGAGGGTCCTCAGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VAMTTGGLCMRNEFSRLDALRQG*EGPQAL Trigger: CAAGGCCTGAGGACCCTCCCACCCCTGCCTCAGTGC...GTCAAGTCTGGAAAACTCATTCCTCATACACAGGCCTCCTGTAGTCATAGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGAACAAGAAAGGGACAGAACGGAGTTGGGGACTTTCCTCCAAGATTTCTACGCCCCCTTGATGTGTaGCAGATGCTGGGCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRTRKGQNGVGDFPPRFLRPLDV*QMLGLW Trigger: CCAGAGGCCCAGCATCTGTCACACATCAAGGGGGCG...TAGAAATCTTGGAGGAAAGTCCCCAACTCCGTTCTGTCCCTTTCTTGTTCTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGAACAAGAAAGGGACAGAACGGAGTTGGGGACTTTCCTCCAAGATTTCTACAGGGAGGTGCCCCCTaGCCAGTAAATGAAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: LRTRKGQNGVGDFPPRFLQGGAP*PVNENH Trigger: GTGGTTTTCATTTACTGGTCAGGGGGCACCTCCCTG...TAGAAATCTTGGAGGAAAGTCCCCAACTCCGTTCTGTCCCTTTCTTGTTCTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACTACAGGAGGCCTGTGTATGAGGAATGAGTTTTCCAGACTTGACGCTTTAATGTGTGACAGATGCTaGGCCTCTGGACACAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: MTTGGLCMRNEFSRLDALMCDRC*ASGHRG Trigger: CCCTCTGTGTCCAGAGGCCCAGCATCTGTCACACAT...TAAAGCGTCAAGTCTGGAAAACTCATTCCTCATACACAGGCCTCCTGTAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACTACAGGAGGCCTGTGTATGAGGAATGAGTTTTCCAGACTTGACGCTTTAAAGTTCCAGCTGTTTTaGACAACTGGGACAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: MTTGGLCMRNEFSRLDALKFQLF*TTGTRW Trigger: CCACCTTGTCCCAGTTGTCCAAAACAGCTGGAACTT...TAAAGCGTCAAGTCTGGAAAACTCATTCCTCATACACAGGCCTCCTGTAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CCA 72 bp | AGGACACAGCAGGGACTGGTACAGGGTGGTCACGGCTaGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTC | + |
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Preference number: 3 (lower is better) Translates to: RTQQGLVQGGHG*GHCVERQVSRL Trigger: GAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGACCACCCTGTACCAGTCCCTGCTGTGTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CCA 72 bp | GTGTCGTGTCATCACTTGACTCTCGGTGGATGGGAGTaGGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VSCHHLTLGGWE*GGLGHEWTSAV Trigger: GACAGCTGAGGTCCACTCGTGACCTAGGCCGCCCCACTCCCATCCACCGAGAGTCAAGTGATGACACGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR TCA 72 bp | CAAACACAGGACACGGGGAGGCGGTGCCCTGGGCGGTaGAGACAAGTTCCAGCTGTTTTGGACAACTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QTQDTGRRCPGR*RQVPAVLDNWD Trigger: GTCCCAGTTGTCCAAAACAGCTGGAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCCGTGTCCTGTGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR GCA 72 bp | AATGGGACGTCCCTGTTAGCCGTGGCCCTTAGCCTGTaGTCTAAGAGGGGTGGTGGTGTGCATGGGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: NGTSLLAVALSL*SKRGGGVHGEV Trigger: GACTTCCCCATGCACACCACCACCCCTCTTAGAGCACAGGCTAAGGGCCACGGCTAACAGGGACGTCCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCTCTTAGTCCAATCCTCACCTaGCAGCCACTTGCCAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: GWGHCVERQVSRLSKSSLSPILT*QPLARV Trigger: AACCCTGGCAAGTGGCTGCAAGGTGAGGATTGGACT...AAGAGAGCTTTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR-3UTR CAA 90 bp | GTACAGGGTGGTCACGGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCTGCATGATGGGTAAGTaGGATGGAACAGGAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: VQGGHGWGHCVERQVSRLCMMGK*DGTGKK Trigger: TTTCTTTCCTGTTCCATCCAACTTACCCATCATGCA...GAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGACCACCCTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CCA 72 bp | GGTGCCCTGGGCGGTGAAGACAAGTTCCAGCTGTTTTaGACAACTGGGACAAGGTGGCAAGGTGGCGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: GALGGEDKFQLF*TTGTRWQGGVS Trigger: ACTAACGCCACCTTGCCACCTTGTCCCAGTTGTCCAAAACAGCTGGAACTTGTCTTCACCGCCCAGGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR GCA 72 bp | GGCACCCACGAGTCCAATCCTCACCTTGCAGCCACTTaGCAGGGTTTCAAGTGTGTCGTGTCATCACTTGAC | + |
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Preference number: 3 (lower is better) Translates to: GTHESNPHLAAT*QGFKCVVSSLD Trigger: GTCAAGTGATGACACGACACACTTGAAACCCTGGCAAGTGGCTGCAAGGTGAGGATTGGACTCGTGGGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CCA 72 bp | AATGAAAACCACATCGAAGACCATGGAACCACACAGTaGGGTCACACTGAAGGGAGTCAGCTCAGACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: NENHIEDHGTTQ*GHTEGSQLRLW Trigger: CCACAGTCTGAGCTGACTCCCTTCAGTGTGACCCCACTGTGTGGTTCCATGGTCTTCGATGTGGTTTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR GCA 72 bp | ATGAGTTTTCCAGACTTGACGCTTTATGTGTGCGGGTaGAGGGGTAGGGCTGTGAAGAAGTGTCTAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: MSFPDLTLYVCG*RGRAVKKCLRT Trigger: TGTTCTTAGACACTTCTTCACAGCCCTACCCCTGCACCCGCACACATAAAGCGTCAAGTCTGGAAAACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR TCA 72 bp | ATTTCTAATACAGGGAGGTGCCCCCTGACCAGTAAATaGAAACCACATCGAAGACCATGGAACCACACAGTG | + |
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Preference number: 3 (lower is better) Translates to: ISNTGRCPLTSK*KPHRRPWNHTV Trigger: CACTGTGTGGTTCCATGGTCTTCGATGTGGTTTTCATTTACTGGTCAGGGGGCACCTCCCTGTATTAGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR TCA 72 bp | TTTCCTCCAAGATTTCTAATACAGGGAGGTGCCCCCTaGCCAGTAAATGAAAACCACATCGAAGACCATGGA | + |
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Preference number: 3 (lower is better) Translates to: FPPRFLIQGGAP*PVNENHIEDHG Trigger: TCCATGGTCTTCGATGTGGTTTTCATTTACTGGTCAGGGGGCACCTCCCTGTATTAGAAATCTTGGAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR TCA 90 bp | ACTGGTACAGGGTGGTCACGGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGCTGATGCCTGGATCCTaGGCCCCCTCTGCTGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: TGTGWSRLGPLCGEASVPLMPGS*APSAVV Trigger: GACGACAGCAGAGGGGGCTCAGGATCCAGGCATCAG...CGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGACCACCCTGTACCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | GGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCATGATGGGTAAGTTGAGGGACCGACAGGGATaGAGTCGTTGGCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GRPRSRVDLSCPCMMGKLRDRQG*SRWRRR Trigger: CCGCCGCCGCCAACGACTCCATCCCTGTCGGTCCCT...CAACTTACCCATCATGCAGGGACAGCTGAGGTCCACTCGTGACCTAGGCCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR TCA 90 bp | GGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCATGATGGGTAAGTTGCCACGGCGGCCAGGTTaGTGGCGTAAGCCTGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: GRPRSRVDLSCPCMMGKLPRRPG*WRKPGR Trigger: ACGACCAGGCTTACGCCATCAACCTGGCCGCCGTGG...CAACTTACCCATCATGCAGGGACAGCTGAGGTCCACTCGTGACCTAGGCCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | AGGGTCCTCAGGCCTTGGGGTAACTGGCCCAGGCAGCTCTTCCTGGGCAGGGGGGAGCACAGCCGCCAATaGCACCAGGATATAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RVLRPWGNWPRQLFLGRGEHSRQ*HQDIGE Trigger: CTCACCTATATCCTGGTGGCATTGGCGGCTGTGCTC...CCCCCTGCCCAGGAAGAGCTGCCTGGGCCAGTTACCCCAAGGCCTGAGGACCCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | AAACACAGGACACGGGGAGGCGGTGCCCTGGGCGGTGAAGACAAGTTCCAGCTGACCCCACTGTTGCTGTaGGTCACCTCATGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: KHRTRGGGALGGEDKFQLTPLLL*VTSWAG Trigger: CCCGGCCCATGAGGTGACGCACAGCAACAGTGGGGT...CAGCTGGAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCCGTGTCCTGTGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | AGGGTCCTCAGGCCTTGGGGTAACTGGCCCAGGCAGCTCTTCCTGGGCAGGGGGCCTGCGTGTACCTCTTaGGCAGTAATCCCGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RVLRPWGNWPRQLFLGRGPACTS*AVIPCS Trigger: GCTACACGGGATTACTGCCCAAGAGGTACACGCAGG...CCCCCTGCCCAGGAAGAGCTGCCTGGGCCAGTTACCCCAAGGCCTGAGGACCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR TCA 90 bp | CTGACCAAACACAGGACACGGGGAGGCGGTGCCCTGGGCGGTGAAGACAAGTTCGCAACAGCAGGGCTCTaGAGGTGGGCCAGCTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: LTKHRTRGGGALGGEDKFATAGL*RWASFV Trigger: AACGAAGCTGGCCCACCTTCAGAGCCCTGCTGTTGC...GAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCCGTGTCCTGTGTTTGGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | AAACACAGGACACGGGGAGGCGGTGCCCTGGGCGGTGAAGACAAGTTCCAGCTGCTCCACGGGCAGGGCTaGCAGGATCTTGCCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: KHRTRGGGALGGEDKFQLLHGQG*QDLAHK Trigger: TTTGTGGGCAAGATCCTGGCAGCCCTGCCCGTGGAG...CAGCTGGAACTTGTCTTCACCGCCCAGGGCACCGCCTCCCCGTGTCCTGTGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | GGAACCACACAGTGGGGTCACACTGAAGGGAGTCAGCTCAGACTGTGGCCAGCCGGCGGAGGGCAGGCATaGCACTGGGGTACACACACA | + |
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Preference number: 4 (lower is better) Translates to: GTTQWGHTEGSQLRLWPAGGGQA*HWGTHT Trigger: TGTGTGTGTACCCCAGTGGCATGCCTGCCCTCCGCC...GGCTGGCCACAGTCTGAGCTGACTCCCTTCAGTGTGACCCCACTGTGTGGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CAA 72 bp | GGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCTCTTaGGCAGGAGGTCCTCCAGCCGATCCTGGCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: GEASVPAQQKLS*AGGPPADPGTH Trigger: GTGGGTGCCAGGATCGGCTGGAGGACCTCCTGCCAAAGAGAGCTTTTGCTGAGCCGGGACACTTGCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | ATGAGTTTTCCAGACTTGACGCTTTATGTGTGCGGGTGCAGGGGTAGGGCTGTGAGGCGAGCAGGTGAGTaGCCCGCCACTCCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: MSFPDLTLYVCGCRGRAVRRAGE*PATPRA Trigger: TGCCCGTGGAGTGGCGGGGCACTCACCTGCTCGCCT...CACAGCCCTACCCCTGCACCCGCACACATAAAGCGTCAAGTCTGGAAAACTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCTCTTTCGGGGACCTGCTGCTaGATAGGGCTGGAGTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GWGHCVERQVSRLSKSSLSGTCC*IGLEFG Trigger: ACCAAACTCCAGCCCTATCCAGCAGCAGGTCCCCGA...AAGAGAGCTTTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCTCTTCCAGTCATCACACCCTaGGTGTACCTCTTGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GWGHCVERQVSRLSKSSLPVITP*VYLLGS Trigger: ACTGCCCAAGAGGTACACGCAGGGTGTGATGACTGG...AAGAGAGCTTTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CAA 72 bp | CCACTTGCCAGGGTTTCAAGTGTGTCGTGTCATCACTaGACTCTCGGTGGATGGGAGTGGGGCGGCCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: PLARVSSVSCHH*TLGGWEWGGLG Trigger: ACCTAGGCCGCCCCACTCCCATCCACCGAGAGTCAAGTGATGACACGACACACTTGAAACCCTGGCAAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTATGACTACAGGAGGCCTGTGTATGAGGAATGAGTTTTCCAGACTTGACCAGGGATGGAGTCGTTaGCGGCGGCGGCGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VAMTTGGLCMRNEFSRLDQGWSR*RRRRWL Trigger: CAGCCACCGCCGCCGCCGCCAACGACTCCATCCCTG...GTCAAGTCTGGAAAACTCATTCCTCATACACAGGCCTCCTGTAGTCATAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | ATGAGTTTTCCAGACTTGACGCTTTATGTGTGCGGGTGCAGGGGTAGGGCTGTGGGGCTGCCAGGATCTTaGCCACAAAGTCTGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: MSFPDLTLYVCGCRGRAVGLPGS*PQSLTG Trigger: ACCTGTCAGACTTTGTGGGCAAGATCCTGGCAGCCC...CACAGCCCTACCCCTGCACCCGCACACATAAAGCGTCAAGTCTGGAAAACTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAACAAGAAAGGGACAGAACGGAGTTGGGGACTTTCCTCCAAGATTTCTATGGCGGCGGCGGCGGTaGCTGTTTGAAAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRTRKGQNGVGDFPPRFLWRRRR*LFESSC Trigger: GCAGCTGCTTTCAAACAGCCACCGCCGCCGCCGCCA...TAGAAATCTTGGAGGAAAGTCCCCAACTCCGTTCTGTCCCTTTCTTGTTCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| 3UTR CAA 72 bp | CGAGTGGACCTCAGCTGTCCCTGCATGATGGGTAAGTaGGATGGAACAGGAAAGAAATGGGACGTCCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RVDLSCPCMMGK*DGTGKKWDVPV Trigger: AACAGGGACGTCCCATTTCTTTCCTGTTCCATCCAACTTACCCATCATGCAGGGACAGCTGAGGTCCACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR TCA 90 bp | ATGAGTTTTCCAGACTTGACGCTTTATGTGTGCGGGTGCAGGGGTAGGGCTGTGCAAAGTAGCCATTGCTaGTGCCCATTAGCAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: MSFPDLTLYVCGCRGRAVQSSHC*CPLAAR Trigger: TCTCGCTGCTAATGGGCATCAGCAATGGCTACTTTG...CACAGCCCTACCCCTGCACCCGCACACATAAAGCGTCAAGTCTGGAAAACTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | TTTTGGACAACTGGGACAAGGTGGCAAGGTGGCGTTAGTGGCTTAGGAGGTGGCGATAGGGCTGGAGTTTaGTGCTCAAAGTGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: FWTTGTRWQGGVSGLGGGDRAGV*CSKWMS Trigger: AGACATCCACTTTGAGCACCAAACTCCAGCCCTATC...GCCACCTCCTAAGCCACTAACGCCACCTTGCCACCTTGTCCCAGTTGTCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR GCA 90 bp | ATGACTACAGGAGGCCTGTGTATGAGGAATGAGTTTTCCAGACTTGACGCTTTAAGGGCTGGAGTTTGGTaGTCAAAGTGGATGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: MTTGGLCMRNEFSRLDALRAGVW*SKWMSP Trigger: CGGAGACATCCACTTTGAGCACCAAACTCCAGCCCT...TAAAGCGTCAAGTCTGGAAAACTCATTCCTCATACACAGGCCTCCTGTAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAACAAGAAAGGGACAGAACGGAGTTGGGGACTTTCCTCCAAGATTTCTAGCTGTCGTCTCCAGCTaGAAGTTGTCAAAGCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: LRTRKGQNGVGDFPPRFLAVVSS*KLSKLK Trigger: CTTTAGCTTTGACAACTTCCAGCTGGAGACGACAGC...TAGAAATCTTGGAGGAAAGTCCCCAACTCCGTTCTGTCCCTTTCTTGTTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CAA 90 bp | GGTGGATGGGAGTGGGGCGGCCTAGGTCACGAGTGGACCTCAGCTGTCCCTGCAGCCACGCAGGGCTCCTaGAGGCGCTGGCTTCCGATA | + |
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Preference number: 5 (lower is better) Translates to: GGWEWGGLGHEWTSAVPAATQGS*RRWLPI Trigger: TATCGGAAGCCAGCGCCTCAAGGAGCCCTGCGTGGC...TGCAGGGACAGCTGAGGTCCACTCGTGACCTAGGCCGCCCCACTCCCATCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS CCA 90 bp | GCCGGGCTCTCCTTCGGGGACCTGCTGCTGGATAGGGCTGGAGTTTaGTGCTCAAAGTGGATGTCTCCGGATGCGACATCGTGGTGCACT | + |
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Preference number: 5 (lower is better) Translates to: AGLSFGDLLLDRAGV*CSKWMSPDATSWCT Trigger: AGTGCACCACGATGTCGCATCCGGAGACATCCACTTTGAGCACCAAACTCCAGCCCTATCCAGCAGCAGGTCCCCGAAGGAGAGCCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CAA 90 bp | ACGCTTTATGTGTGCGGGTGCAGGGGTAGGGCTGTGAAGAAGTGTCTAAGAACAGGCGGCGGTGGCTGTTaGAAAGCAGCTGCCGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: TLYVCGCRGRAVKKCLRTGGGGC*KAAAVG Trigger: GCCCACGGCAGCTGCTTTCAAACAGCCACCGCCGCC...TGTTCTTAGACACTTCTTCACAGCCCTACCCCTGCACCCGCACACATAAAGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS CCA 90 bp | GTCTCCAGCTGGAAGTTGTCAAAGCTAAAGCTTGTCACCACACTCTaGTCAGATGTGGCTGCCACGCAGGGCTCCTTGAGGCGCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: VSSWKLSKLKLVTTL*SDVAATQGSLRRWL Trigger: AAGCCAGCGCCTCAAGGAGCCCTGCGTGGCAGCCACATCTGACCAGAGTGTGGTGACAAGCTTTAGCTTTGACAACTTCCAGCTGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058418.8 ENSMUST00000198728.5 |
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| CDS-3UTR CAA 90 bp | TCACGGCTGGGGCCACTGTGTGGAGAGGCAAGTGTCCCGGCTCAGCAAAAGCTCGTCTCCAGCTGGAAGTaGTCAAAGCTAAAGCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SRLGPLCGEASVPAQQKLVSSWK*SKLKLV Trigger: GACAAGCTTTAGCTTTGACAACTTCCAGCTGGAGAC...GAGCTTTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS-3UTR CAA 90 bp | GTTGCTATGACTACAGGAGGCCTGTGTATGAGGAATGAGTTTTCCAGACTTGACGTGGGCCAGCTTCGTTaGACTCGTGGCCGGGGCACA | + |
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Preference number: 5 (lower is better) Translates to: VAMTTGGLCMRNEFSRLDVGQLR*TRGRGT Trigger: TGTGCCCCGGCCACGAGTCAAACGAAGCTGGCCCAC...GTCAAGTCTGGAAAACTCATTCCTCATACACAGGCCTCCTGTAGTCATAGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS CCA 72 bp | CCTCATGGGCCGGGCTCTCCTTCGGGGACCTGCTGCTaGATAGGGCTGGAGTTTGGTGCTCAAAGTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: PHGPGSPSGTCC*IGLEFGAQSGC Trigger: ACATCCACTTTGAGCACCAAACTCCAGCCCTATCCAGCAGCAGGTCCCCGAAGGAGAGCCCGGCCCATGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS GCA 72 bp | GCTAAAGCTTGTCACCACACTCTGGTCAGATGTGGCTaGCACGCAGGGCTCCTTGAGGCGCTGGCTTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: AKACHHTLVRCG*HAGLLEALASD Trigger: ATCGGAAGCCAGCGCCTCAAGGAGCCCTGCGTGGCAGCCACATCTGACCAGAGTGTGGTGACAAGCTTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058418.8 ENSMUST00000198728.5 |
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| CDS CCA 72 bp | CTGCTGCTGGATAGGGCTGGAGTTTGGTGCTCAAAGTaGATGTCTCCGGATGCGACATCGTGGTGCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: LLLDRAGVWCSK*MSPDATSWCTR Trigger: CCGAGTGCACCACGATGTCGCATCCGGAGACATCCACTTTGAGCACCAAACTCCAGCCCTATCCAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS CCA 72 bp | TCCTTCGGGGACCTGCTGCTGGATAGGGCTGGAGTTTaGTGCTCAAAGTGGATGTCTCCGGATGCGACATCG | + |
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Preference number: 6 (lower is better) Translates to: SFGDLLLDRAGV*CSKWMSPDATS Trigger: CGATGTCGCATCCGGAGACATCCACTTTGAGCACCAAACTCCAGCCCTATCCAGCAGCAGGTCCCCGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058418.8 |
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| CDS GCA 72 bp | ACCCCTGACTCTGATGCCTGGATCCTGAGCCCCCTCTaGTGTCGTCTCCAGCTGGAAGTTGTCAAAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: TPDSDAWILSPL*CRLQLEVVKAK Trigger: TTTAGCTTTGACAACTTCCAGCTGGAGACGACAGCAGAGGGGGCTCAGGATCCAGGCATCAGAGTCAGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058418.8 ENSMUST00000198728.5 |
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| CDS CCA 72 bp | TGGAAGTTGTCAAAGCTAAAGCTTGTCACCACACTCTaGTCAGATGTGGCTGCCACGCAGGGCTCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: WKLSKLKLVTTL*SDVAATQGSLR Trigger: CCTCAAGGAGCCCTGCGTGGCAGCCACATCTGACCAGAGTGTGGTGACAAGCTTTAGCTTTGACAACTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058418.8 ENSMUST00000198728.5 |
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