RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC29A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023942

Ensembl transcript IDs: ENSMUST00000051574.13, ENSMUST00000064889.13, ENSMUST00000097317.10, ENSMUST00000163492.8, ENSMUST00000163905.8, ENSMUST00000164217.8, ENSMUST00000164618.8, ENSMUST00000164769.8, ENSMUST00000166119.8, ENSMUST00000166633.8, ENSMUST00000167195.8, ENSMUST00000167332.8, ENSMUST00000167692.8, ENSMUST00000169729.8, ENSMUST00000170488.8, ENSMUST00000171081.8, ENSMUST00000171847.8, ENSMUST00000172301.8

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTaGTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAAGCAGGCAGTG +
Preference number: 1 (lower is better)
Translates to: RGKQKSARRTAPLDP*SSLAGKEVSRKQAV
Trigger: CACTGCCTGCTTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR-3UTR CCA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTCCCGCAGGCCATCGCTaGCTCCTGGACAGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: AWSKRASVGAVSQRPLSPPAGHR*LLDSWA
Trigger: CGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG...AGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR CAA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATaGAGCCCTTGCCATTCTGACCCTGAATTCCAAGTCCACCCGCAG +
Preference number: 2 (lower is better)
Translates to: AWSKRASVGAVSQRP*SPCHSDPEFQVHPQ
Trigger: CTGCGGGTGGACTTGGAATTCAGGGTCAGAATGGCAAGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR CCA 72 bp AGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTaGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAG +
Preference number: 3 (lower is better)
Translates to: SPPAGHRWLLDS*AKHSPEESRSQ
Trigger: CTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR CCA 72 bp GAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTaGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: EFQVHPQAIAGS*TAGRSTVQRKA
Trigger: TGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR TCA 72 bp AGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTaGGCCCTTGCCATTCTGACCCTGAATTCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: SGHQSELSVRGH*ALAILTLNSKS
Trigger: GGACTTGGAATTCAGGGTCAGAATGGCAAGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR GCA 72 bp TCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTTaGCATTCTGACCCTGAATTCCAAGTCCACCCGCAG +
Preference number: 3 (lower is better)
Translates to: SVGAVSQRPLSP*HSDPEFQVHPQ
Trigger: CTGCGGGTGGACTTGGAATTCAGGGTCAGAATGGCAAGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAACGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEERCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGCGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRRCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGACGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRRCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAACGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NSPSRPLLVPGREGSEQERCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGATCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGSNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAATCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEESNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGTGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAGGCTGTGTAGTTGGCTaGCAGGACACCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGGCVVG*QDTCQT
Trigger: GGTCTGGCAGGTGTCCTGCCAGCCAACTACACAGCC...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGATGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCTCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESSWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCTCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESSNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGATGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAATGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGGGCTGTGTAGTTGGCTaGCAGGACACCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRGCVVG*QDTCQT
Trigger: GGTCTGGCAGGTGTCCTGCCAGCCAACTACACAGCC...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAATCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NSPSRPLLVPGREGSEQESWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGTGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCGGCTGTGTAGTTGGCTaGCAGGACACCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSGCVVG*QDTCQT
Trigger: GGTCTGGCAGGTGTCCTGCCAGCCAACTACACAGCC...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGATGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCTGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGTGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCCGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCRCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSRCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGACGTCCAGGCGGTTTGTaGAATACTTGGTTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGRPGGL*NTWLRS
Trigger: TGACCGCAACCAAGTATTTCACAAACCGCCTGGACG...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEENRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAAGGCGAGCCTTCACGTTaGAGAGCATCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEGEPSR*RASAGE
Trigger: TTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCC...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSAWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCTCCGAGGACACATTCTaGGACACGTCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESSEDTF*DTSRRF
Trigger: AAACCGCCTGGACGTGTCCCAGAATGTGTCCTCGGA...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAACAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGTGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGEVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRTGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPARCAPQ*RAFTLQ
Trigger: CTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCG...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSASWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCATCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLASWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTTCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AWSKRASVGAVSQRPLSPSWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...AGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAACAGCCAAGGCCTTGGTaGTTTCGCATGATTGATCAG +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEQPRPW*FRMIDQ
Trigger: CTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTG...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGACAGCCAAGGCCTTGGTaGTTTCGCATGATTGATCAG +
Preference number: 4 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGQPRPW*FRMIDQ
Trigger: CTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTG...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSASNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGTCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWSNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGTCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRRARGGTSGHTTPISHPSNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGCGAGCCTTCACGTTaGAGAGCATCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQGEPSR*RASAGE
Trigger: TTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCC...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCTGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTGGGCCCGAAGCACATaGAGAGGCTGGCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCWARST*RGWRGS
Trigger: GCTACCTCGCCAGCCTCTGCATGTGCTTCGGGCCCA...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAATCCGAGGACACATTCTaGGACACGTCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGESEDTF*DTSRRF
Trigger: AAACCGCCTGGACGTGTCCCAGAATGTGTCCTCGGA...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCTCCGAGGACACATTCTaGGACACGTCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSSEDTF*DTSRRF
Trigger: AAACCGCCTGGACGTGTCCCAGAATGTGTCCTCGGA...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTGGCTGTGTAGTTGGCTaGCAGGACACCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: AWSKRASVGAVSQRPLSPGCVVG*QDTCQT
Trigger: GGTCTGGCAGGTGTCCTGCCAGCCAACTACACAGCC...AGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTTGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: AWSKRASVGAVSQRPLSPWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...AGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGTTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRLCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCTTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESLCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAACGTCCAGGCGGTTTGTaGAATACTTGGTTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGERPGGL*NTWLRS
Trigger: TGACCGCAACCAAGTATTTCACAAACCGCCTGGACG...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCTCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSSWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCTCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSSWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEETERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGCAGCCAAGGCCTTGGTaGTTTCGCATGATTGATCAG +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRQPRPW*FRMIDQ
Trigger: CTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTG...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGCGAGCCTTCACGTTaGAGAGCATCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLAGEPSR*RASAGE
Trigger: TTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCC...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCGGCGAGCCTTCACGTTaGAGAGCATCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: EESRSQLEEQPLSTPARPGEPSR*RASAGE
Trigger: TTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCC...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCGGCTGTGTAGTTGGCTaGCAGGACACCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSGCVVG*QDTCQT
Trigger: GGTCTGGCAGGTGTCCTGCCAGCCAACTACACAGCC...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSAKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTAAGCCAGCCAGGCCCTaGCCACTCATGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPAKPARP*PLMMGA
Trigger: AGCCCCCATCATGAGTGGCCAGGGCCTGGCTGGCTT...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCCAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EESRSQLEEQPLSTPARPVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLAVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRRARGGTSGHTTPISHPVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAATTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NSPSRPLLVPGREGSEQELCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCTCATGGCGACAGAGGTaGAGAAGCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRSWRQR*RSQPGP
Trigger: AGGGCCTGGCTGGCTTCTTCACCTCTGTCGCCATGA...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR TCA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRTERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCTCCAACTTGGTCTCCTaGTCTGCAGGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRSNLVS*SAGPAR
Trigger: CCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGGA...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR GCA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCGGCGAGCCTTCACGTTaGAGAGCATCAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSGEPSR*RASAGE
Trigger: TTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCC...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTCCGAGGACACATTCTaGGACACGTCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSASEDTF*DTSRRF
Trigger: AAACCGCCTGGACGTGTCCCAGAATGTGTCCTCGGA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCCCAGACCAAAAAGGCTaGCTTGCAAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESPDQKG*LAKWHQ
Trigger: TTGGTGCCATTTTGCAAGCCAGCCTTTTTGGTCTGG...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCGGCTGTGTAGTTGGCTaGCAGGACACCTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRGCVVG*QDTCQT
Trigger: GGTCTGGCAGGTGTCCTGCCAGCCAACTACACAGCC...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCTGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTTGGTGGGTGGAGAGTTaGGGCCTGGCACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPAWWVES*GLAPQI
Trigger: AATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCA...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EESRSQLEEQPLSTPARPTGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLATGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRRARGGTSGHTTPISHPTGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR CAA 72 bp GCCCTATCCTGTGATAGGCAGGCGGACAGATCTCTCTaGGCCCTGGAGTCTCTTGTGCTTGGAGTAAGCGGG +
Preference number: 4 (lower is better)
Translates to: ALSCDRQADRSL*ALESLVLGVSG
Trigger: CCCGCTTACTCCAAGCACAAGAGACTCCAGGGCCAAGAGAGATCTGTCCGCCTGCCTATCACAGGATAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GRRARGGTSGHTTPISHPNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSTERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGETERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCTTGGCTCCTCTCTTATaGGATCCAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSLAPLL*DPTWSP
Trigger: AGGAGACCAAGTTGGATCTCATAAGAGAGGAGCCAA...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064889.13
ENSMUST00000163492.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAACCAGACCAAAAAGGCTaGCTTGCAAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEPDQKG*LAKWHQ
Trigger: TTGGTGCCATTTTGCAAGCCAGCCTTTTTGGTCTGG...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTCAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSAQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCACAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLAQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTCAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: AWSKRASVGAVSQRPLSPQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...AGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRVSVGG*RVGAWH
Trigger: GTGCCAGGCCCCAACTCTCCACCCACCAACAGAAAC...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSTGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSALCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGCGTCCAGGCGGTTTGTaGAATACTTGGTTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSRPGGL*NTWLRS
Trigger: TGACCGCAACCAAGTATTTCACAAACCGCCTGGACG...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCGTCCAGGCGGTTTGTaGAATACTTGGTTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSRPGGL*NTWLRS
Trigger: TGACCGCAACCAAGTATTTCACAAACCGCCTGGACG...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQTERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCTCCGAGGACACATTCTaGGACACGTCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSASEDTF*DTSRRF
Trigger: AAACCGCCTGGACGTGTCCCAGAATGTGTCCTCGGA...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCCAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCACTGGTTTCTGTTGGTaGGTGGAGAGTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSATGFCW*VESWGL
Trigger: CAGGCCCCAACTCTCCACCCACCAACAGAAACCAGT...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSLCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
3UTR CAA 72 bp AAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATaGAGCCCTTGCCATTCTGACCCTGAATTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KRASVGAVSQRP*SPCHSDPEFQV
Trigger: GACTTGGAATTCAGGGTCAGAATGGCAAGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCGTCCAGGCGGTTTGTaGAATACTTGGTTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRRPGGL*NTWLRS
Trigger: TGACCGCAACCAAGTATTTCACAAACCGCCTGGACG...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR TCA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAACAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCAACAGGCCACGGGAATaGAGTAGCTTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRNRPRE*SSFSRD
Trigger: GTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTT...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR TCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLATERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGTTGGCTCCTCTCTTATaGGATCCAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRARGGTSGHTTPISHPLAPLL*DPTWSP
Trigger: AGGAGACCAAGTTGGATCTCATAAGAGAGGAGCCAA...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064889.13
ENSMUST00000163492.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCATTGGCTCCTCTCTTATaGGATCCAACTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KQKSARRTAPLDPCSSLALAPLL*DPTWSP
Trigger: AGGAGACCAAGTTGGATCTCATAAGAGAGGAGCCAA...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064889.13
ENSMUST00000163492.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCAGAACCACTGGCAATaGCACAGATCATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPAQNHWQ*HRSWRQ
Trigger: CTGTCGCCATGATCTGTGCCATTGCCAGTGGTTCTG...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTTTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPALCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCTTGTGCCTGCGATGCTaGATTCCACCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSALCLRC*IPPQQS
Trigger: TGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAA...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR TCA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGACAGAAAGAAGGACATaGTGTTTCCTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSTERRT*CFLLSP
Trigger: CGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGT...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCAGCCAAGGCCTTGGTaGTTTCGCATGATTGATCAG +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPAQPRPW*FRMIDQ
Trigger: CTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTG...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCAGCCAAGGCCTTGGTaGTTTCGCATGATTGATCAG +
Preference number: 4 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRQPRPW*FRMIDQ
Trigger: CTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTG...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR GCA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: EESRSQLEEQPLSTPARPGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCCAGACCAAAAAGGCTaGCTTGCAAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSPDQKG*LAKWHQ
Trigger: TTGGTGCCATTTTGCAAGCCAGCCTTTTTGGTCTGG...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCAGACCAAAAAGGCTaGCTTGCAAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSPDQKG*LAKWHQ
Trigger: TTGGTGCCATTTTGCAAGCCAGCCTTTTTGGTCTGG...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCCCAGACCAAAAAGGCTaGCTTGCAAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCPDQKG*LAKWHQ
Trigger: TTGGTGCCATTTTGCAAGCCAGCCTTTTTGGTCTGG...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGACAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCCAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR GCA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCCCAGACCAAAAAGGCTaGCTTGCAAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSAPDQKG*LAKWHQ
Trigger: TTGGTGCCATTTTGCAAGCCAGCCTTTTTGGTCTGG...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR GCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSAGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR GCA 90 bp AGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: SPEESRSQLEEQPLSTPAGQNDN*TGCDEV
Trigger: TACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCC...AGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTCAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSAQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGCAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR TCA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCCAAAATGGCACCAAATaGATTGATGAGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: RARPRHRKKDMMFPAVSAQNGTK*IDEHNL
Trigger: AAGATTGTGCTCATCAATTCATTTGGTGCCATTTTG...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGATGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS CCA 90 bp AACACAATCCTCGAGGCGACCAAAACCGGCAGCCAGCGGCTATCCTaGCCAGGCCACATGCAGACAGCAGTGAGGCTCCGGCCTAGCCAG +
Preference number: 5 (lower is better)
Translates to: NTILEATKTGSQRLS*PGHMQTAVRLRPSQ
Trigger: CTGGCTAGGCCGGAGCCTCACTGCTGTCTGCATGTGGCCTGGCCAGGATAGCCGCTGGCTGCCGGTTTTGGTCGCCTCGAGGATTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAATTGGTGGGTGGAGAGTaGGGGCCTGGCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: NSPSRPLLVPGREGSEQELVGGE*GPGTPD
Trigger: ATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAA...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS CCA 90 bp GCAGCCATGAAGGCGATGAACCAGGCGTCATGCTTAAAGACGAAGTaGTGCCGCTGCGCGCCGCAGTGGCGAGCCTTCACGTTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: AAMKAMNQASCLKTK*CRCAPQWRAFTLQS
Trigger: GCTCTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCGGCACCACTTCGTCTTTAAGCATGACGCCTGGTTCATCGCCTTCATGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGTTGGTGGGTGGAGAGTaGGGGCCTGGCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQLVGGE*GPGTPD
Trigger: ATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAA...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGATGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCTGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAATGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCTCCGCCTCAGCTGGTTaGACTTTCTTGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESSASAG*TFLGPK
Trigger: CTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGA...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS GCA 90 bp GCCATGAAGGCGATGAACCAGGCGTCATGCTTAAAGACGAAGTGGTaGCGCTGCGCGCCGCAGTGGCGAGCCTTCACGTTGCAGAGCATC +
Preference number: 5 (lower is better)
Translates to: AMKAMNQASCLKTKW*RCAPQWRAFTLQSI
Trigger: GATGCTCTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCGGCACCACTTCGTCTTTAAGCATGACGCCTGGTTCATCGCCTTCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS GCA 90 bp TTGGAGAAGGCAAAGGCAGCCATGAAGGCGATGAACCAGGCGTCATaGTTAAAGACGAAGTGGTGCCGCTGCGCGCCGCAGTGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: LEKAKAAMKAMNQAS*LKTKWCRCAPQWRA
Trigger: GGCTCGCCACTGCGGCGCGCAGCGGCACCACTTCGTCTTTAAGCATGACGCCTGGTTCATCGCCTTCATGGCTGCCTTTGCCTTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTTGGTGGGTGGAGAGTaGGGGCCTGGCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSALVGGE*GPGTPD
Trigger: ATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGTTGGTGGGTGGAGAGTaGGGGCCTGGCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWLVGGE*GPGTPD
Trigger: ATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAA...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAATCCGCCTCAGCTGGTTaGACTTTCTTGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGESASAG*TFLGPK
Trigger: CTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGA...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCTCCGCCTCAGCTGGTTaGACTTTCTTGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSSASAG*TFLGPK
Trigger: CTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGA...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTTGGTGGGTGGAGAGTaGGGGCCTGGCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCLVGGE*GPGTPD
Trigger: ATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAA...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTTGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSAWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGTGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GRRARGGTSGHTTPISHPWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: RRTAPLDPCSSLAGKEVSAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...GCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAAGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGTCCGCCTCAGCTGGTTaGACTTTCTTGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQSASAG*TFLGPK
Trigger: CTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGA...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS TCA 90 bp TGGCAAGGCCACTGTGGGGTCAGCCAAGGCCTTGGTGCTTTCGCATaGTTGATCAGTGTCCGAGGACACATTCTGGGACACGTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: WQGHCGVSQGLGAFA*LISVRGHILGHVQA
Trigger: CGCCTGGACGTGTCCCAGAATGTGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCACAGTGGCCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000170488.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS CCA 90 bp GAGAACTCCGGGCTGGCAAGGCCACTGTGGGGTCAGCCAAGGCCTTaGTGCTTTCGCATGATTGATCAGTGTCCGAGGACACATTCTGGG +
Preference number: 5 (lower is better)
Translates to: ENSGLARPLWGQPRP*CFRMIDQCPRTHSG
Trigger: CCCAGAATGTGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCACAGTGGCCTTGCCAGCCCGGAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS CCA 90 bp CAGGCGTCATGCTTAAAGACGAAGTGGTGCCGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAGAGCATCAGCAGGGGAATAAACACA +
Preference number: 5 (lower is better)
Translates to: QASCLKTKWCRCAPQ*RAFTLQSISRGINT
Trigger: TGTGTTTATTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCGGCACCACTTCGTCTTTAAGCATGACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAACACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEEHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCCCTGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: AWSKRASVGAVSQRPLSPGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...AGGGCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSAGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: EESRSQLEEQPLSTPARPGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: KQKSARRTAPLDPCSSLAGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...TGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCTTGGTGGGTGGAGAGTaGGGGCCTGGCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRLVGGE*GPGTPD
Trigger: ATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAA...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAAATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSWRAFT*QSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCA...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTCCGCCTCAGCTGGTTaGACTTTCTTGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: EESRSQLEEQPLSTPARPSASAG*TFLGPK
Trigger: CTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGA...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGGGTCATGACATTGTaGAAGATGGCACTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: PAGHRWLLDSWAKHSPEERVMTL*KMALRE
Trigger: TTCTCTCAGTGCCATCTTCAACAATGTCATGACCCT...TTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp ACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAGGGTCATGACATTGTaGAAGATGGCACTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: TRRPSLAPGQLGEAQSRGRVMTL*KMALRE
Trigger: TTCTCTCAGTGCCATCTTCAACAATGTCATGACCCT...TCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCCACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: AGHRWLLDSWAKHSPEESHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...GCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGAGCTTTTCCAGGGACTaGTGCCTGCGATGCTGGATT +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQSFSRD*CLRCWI
Trigger: AATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCT...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: GRRARGGTSGHTTPISHPAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCTCCGCCTCAGCTGGTTaGACTTTCTTGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSSASAG*TFLGPK
Trigger: CTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGA...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS TCA 90 bp AAGGCCACTGTGGGGTCAGCCAAGGCCTTGGTGCTTTCGCATGATTaGTCAGTGTCCGAGGACACATTCTGGGACACGTCCAGGCGGTTT +
Preference number: 5 (lower is better)
Translates to: KATVGSAKALVLSHD*SVSEDTFWDTSRRF
Trigger: AAACCGCCTGGACGTGTCCCAGAATGTGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCACAGTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000170488.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS-3UTR CAA 90 bp AACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGAACACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: NSPSRPLLVPGREGSEQEHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...TTCCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCGGAATACCAGCAGGATaGCCAGCAGGCTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: RARPRHRKKDMMFPAVSAGIPAG*PAGCPR
Trigger: TCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTCC...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGAGCTTTTCCAGGGACTaGTGCCTGCGATGCTGGATT +
Preference number: 5 (lower is better)
Translates to: ESRSQLEEQPLSTPARPWSFSRD*CLRCWI
Trigger: AATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCT...CCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCGCTGGTTTGACTTTCTaGGGCCCGAAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCAGLTF*GPKHMQ
Trigger: CTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGC...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS GCA 90 bp GAAACAGGCCACGGGAATGAAGTAGCTTTTCCAGGGACTTGTGCCTaGGATGCTGGATTCCACCTCAGCAGTCACAGCAGGGAACAACCC +
Preference number: 5 (lower is better)
Translates to: ETGHGNEVAFPGTCA*DAGFHLSSHSREQP
Trigger: GGGTTGTTCCCTGCTGTGACTGCTGAGGTGGAATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCTACTTCATTCCCGTGGCCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS GCA 90 bp TCCCAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTaGTGTCTCCGCCTCAGCTGGTTTGACTTTCTTGGGCCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: SQSQAQTQKEGHDVS*CLRLSWFDFLGPEA
Trigger: TGCTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAAAGGGTCATGACATTGTaGAAGATGGCACTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGERVMTL*KMALRE
Trigger: TTCTCTCAGTGCCATCTTCAACAATGTCATGACCCT...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGCACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGAGCTTTTCCAGGGACTaGTGCCTGCGATGCTGGATT +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSSFSRD*CLRCWI
Trigger: AATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCT...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCAGCTTTTCCAGGGACTaGTGCCTGCGATGCTGGATT +
Preference number: 5 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSSFSRD*CLRCWI
Trigger: AATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCT...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCAGCTTTTCCAGGGACTaGTGCCTGCGATGCTGGATT +
Preference number: 5 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSSFSRD*CLRCWI
Trigger: AATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCT...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS CCA 90 bp ACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCTCAGCTaGTTTGACTTTCTTGGGCCCGAAGCACATGCAGAGGCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: TQKEGHDVSCCLRLS*FDFLGPEAHAEAGE
Trigger: CTCGCCAGCCTCTGCATGTGCTTCGGGCCCAAGAAAGTCAAACCAGCTGAGGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGAGGGTCATGACATTGTaGAAGATGGCACTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQRVMTL*KMALRE
Trigger: TTCTCTCAGTGCCATCTTCAACAATGTCATGACCCT...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCCACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: EESRSQLEEQPLSTPARPHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...GGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRIDWFL*VGGELG
Trigger: CCCCAACTCTCCACCCACCAACAGAAACCAGTCTAT...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp AGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGGGAAGGAAGTGAGCAGGCTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: RTAPLDPCSSLAGKEVSRLLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...CCTGCTCACTTCCTTCCCTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCAGCTTTTCCAGGGACTaGTGCCTGCGATGCTGGATT +
Preference number: 5 (lower is better)
Translates to: RARPRHRKKDMMFPAVSASFSRD*CLRCWI
Trigger: AATCCAGCATCGCAGGCACAAGTCCCTGGAAAAGCT...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGCACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp GGCCATCGCTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGACTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GHRWLLDSWAKHSPEESRLLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...TCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAGCGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGAATTCCAAGTCCACCCGCAGGCCATCGCTGGCTCCTGGACAGCTGGGCGAACTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LNSKSTRRPSLAPGQLGELLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...TTCGCCCAGCTGTCCAGGAGCCAGCGATGGCCTGCGGGTGGACTTGGAATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCCACAGGGTCATGACATaGTTGAAGATGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: RARPRHRKKDMMFPAVSAHRVMT*LKMALR
Trigger: TCTCAGTGCCATCTTCAACAATGTCATGACCCTGTG...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp AGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTGGCAGATGGCACCAAATGAATaGATGAGCACAATCTTGATC +
Preference number: 5 (lower is better)
Translates to: SRSQLEEQPLSTPARPWQMAPNE*MSTILI
Trigger: GATCAAGATTGTGCTCATCAATTCATTTGGTGCCAT...CTGCCAGGGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCAGGGTCATGACATTGTaGAAGATGGCACTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: RARPRHRKKDMMFPAVSARVMTL*KMALRE
Trigger: TTCTCTCAGTGCCATCTTCAACAATGTCATGACCCT...GGCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp GGAAGAAGGGCAAGGGGAGGGACATCAGGTCACACGACACCAATCAGCCATCCGATGGCACCAAATGAATaGATGAGCACAATCTTGATC +
Preference number: 5 (lower is better)
Translates to: GRRARGGTSGHTTPISHPMAPNE*MSTILI
Trigger: GATCAAGATTGTGCTCATCAATTCATTTGGTGCCAT...CGGATGGCTGATTGGTGTCGTGTGACCTGATGTCCCTCCCCTTGCCCTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CTGGCTCCTGGACAGCTGGGCGAAGCACAGTCCAGAGGAAAGCAGAAGTCAGCTCTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LAPGQLGEAQSRGKQKSALLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...AGCTGACTTCTGCTTTCCTCTGGACTGTGCTTCGCCCAGCTGTCCAGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGATGGCACCAAATGAATaGATGAGCACAATCTTGATC +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSMAPNE*MSTILI
Trigger: GATCAAGATTGTGCTCATCAATTCATTTGGTGCCAT...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TGTGCTTGGAGTAAGCGGGCATCAGTCGGAGCTGTCAGTCAGAGGCCATTGAGCATGGCACCAAATGAATaGATGAGCACAATCTTGATC +
Preference number: 5 (lower is better)
Translates to: CAWSKRASVGAVSQRPLSMAPNE*MSTILI
Trigger: GATCAAGATTGTGCTCATCAATTCATTTGGTGCCAT...GCTCAATGGCCTCTGACTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp TCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGCTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SRGKQKSARRTAPLDPCSLLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...CGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp AGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCTCGTCCCTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: RGKQKSARRTAPLDPCSSLLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...GGACGAGCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CAGTCCAGAGGAAAGCAGAAGTCAGCTAGAAGAACAGCCCCTCTCGACCCCTGCCTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: QSRGKQKSARRTAPLDPCLLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...GCAGGGGTCGAGAGGGGCTGTTCTTCTAGCTGACTTCTGCTTTCCTCTGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS CCA 90 bp GATACTCTTAAGTATGGCTTTGATAGACTGGTTTCTGTTGGTGGGTaGAGAGTTGGGGCCTGGCACCCCAGATTCCTCTCTTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: DTLKYGFDRLVSVGG*RVGAWHPRFLSSSF
Trigger: AAAGGAAGAAGAGAGGAATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAACAGAAACCAGTCTATCAAAGCCATACTTAAGAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS-3UTR CAA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCATGGCACCAAATGAATaGATGAGCACAATCTTGATC +
Preference number: 5 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRMAPNE*MSTILI
Trigger: GATCAAGATTGTGCTCATCAATTCATTTGGTGCCAT...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS-3UTR CAA 90 bp CAGAGCCAGGCCCAGACACAGAAAGAAGGACATGATGTTTCCTGCTGTCTCCGCCTCTTAAGTATGGCTTaGATAGACTGGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: QSQAQTQKEGHDVSCCLRLLSMA*IDWFLL
Trigger: CAACAGAAACCAGTCTATCAAAGCCATACTTAAGAG...GCGGAGACAGCAGGAAACATCATGTCCTTCTTTCTGTGTCTGGGCCTGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164769.8
CDS CCA 72 bp TGCTTAAAGACGAAGTGGTGCCGCTGCGCGCCGCAGTaGCGAGCCTTCACGTTGCAGAGCATCAGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: CLKTKWCRCAPQ*RAFTLQSISRG
Trigger: TCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCGGCACCACTTCGTCTTTAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS GCA 72 bp GCAAAGGCAGCCATGAAGGCGATGAACCAGGCGTCATaGTTAAAGACGAAGTGGTGCCGCTGCGCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: AKAAMKAMNQAS*LKTKWCRCAPQ
Trigger: CTGCGGCGCGCAGCGGCACCACTTCGTCTTTAAGCATGACGCCTGGTTCATCGCCTTCATGGCTGCCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS CAA 72 bp TGGTGCCGCTGCGCGCCGCAGTGGCGAGCCTTCACGTaGCAGAGCATCAGCAGGGGAATAAACACAATCCTC +
Preference number: 6 (lower is better)
Translates to: WCRCAPQWRAFT*QSISRGINTIL
Trigger: GAGGATTGTGTTTATTCCCCTGCTGATGCTCTGCAACGTGAAGGCTCGCCACTGCGGCGCGCAGCGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8
CDS CCA 72 bp GGGCTGGCAAGGCCACTGTGGGGTCAGCCAAGGCCTTaGTGCTTTCGCATGATTGATCAGTGTCCGAGGACA +
Preference number: 6 (lower is better)
Translates to: GLARPLWGQPRP*CFRMIDQCPRT
Trigger: TGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCACAGTGGCCTTGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS TCA 72 bp CCAACTTGGTCTCCTGCTCTGCAGGCCCCGCAAGGTTaGGCTGCAGGTAATGGCGATAGAATTCCGTCCGAG +
Preference number: 6 (lower is better)
Translates to: PTWSPALQAPQG*AAGNGDRIPSE
Trigger: CTCGGACGGAATTCTATCGCCATTACCTGCAGCTCAACCTTGCGGGGCCTGCAGAGCAGGAGACCAAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000164217.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171081.8
ENSMUST00000171847.8
CDS CAA 90 bp CAGGTGAAGACCAGCAAGGGCAGCATGGCACACAGGGTCATGACATaGTTGAAGATGGCACTGAGAGAACTCCGGGCTGGCAAGGCCACT +
Preference number: 6 (lower is better)
Translates to: QVKTSKGSMAHRVMT*LKMALRELRAGKAT
Trigger: AGTGGCCTTGCCAGCCCGGAGTTCTCTCAGTGCCATCTTCAACAATGTCATGACCCTGTGTGCCATGCTGCCCTTGCTGGTCTTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS TCA 72 bp GTGGGGTCAGCCAAGGCCTTGGTGCTTTCGCATGATTaGTCAGTGTCCGAGGACACATTCTGGGACACGTCC +
Preference number: 6 (lower is better)
Translates to: VGSAKALVLSHD*SVSEDTFWDTS
Trigger: GGACGTGTCCCAGAATGTGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000170488.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS GCA 72 bp CTGGCAAGGCCACTGTGGGGTCAGCCAAGGCCTTGGTaGTTTCGCATGATTGATCAGTGTCCGAGGACACAT +
Preference number: 6 (lower is better)
Translates to: LARPLWGQPRPW*FRMIDQCPRTH
Trigger: ATGTGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCACAGTGGCCTTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000170488.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS CAA 72 bp ACCAGCAAGGGCAGCATGGCACACAGGGTCATGACATaGTTGAAGATGGCACTGAGAGAACTCCGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: TSKGSMAHRVMT*LKMALRELRAG
Trigger: GCCAGCCCGGAGTTCTCTCAGTGCCATCTTCAACAATGTCATGACCCTGTGTGCCATGCTGCCCTTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS TCA 72 bp CACTGTGGGGTCAGCCAAGGCCTTGGTGCTTTCGCATaGTTGATCAGTGTCCGAGGACACATTCTGGGACAC +
Preference number: 6 (lower is better)
Translates to: HCGVSQGLGAFA*LISVRGHILGH
Trigger: GTGTCCCAGAATGTGTCCTCGGACACTGATCAATCATGCGAAAGCACCAAGGCCTTGGCTGACCCCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167332.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000170488.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS CAA 72 bp CAGGATTGCCAGCAGGCTGCCCAAGATCCGAACAGATaGAGAGATCCGCTGATGCAGAAACGAGTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: QDCQQAAQDPNR*RDPLMQKRVEA
Trigger: TGCCTCAACTCGTTTCTGCATCAGCGGATCTCTCAATCTGTTCGGATCTTGGGCAGCCTGCTGGCAATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000171081.8
ENSMUST00000171847.8
ENSMUST00000172301.8
CDS CAA 90 bp GAATACCAGCAGGATTGCCAGCAGGCTGCCCAAGATCCGAACAGATaGAGAGATCCGCTGATGCAGAAACGAGTTGAGGCAGGTGAAGAC +
Preference number: 6 (lower is better)
Translates to: EYQQDCQQAAQDPNR*RDPLMQKRVEAGED
Trigger: GTCTTCACCTGCCTCAACTCGTTTCTGCATCAGCGGATCTCTCAATCTGTTCGGATCTTGGGCAGCCTGCTGGCAATCCTGCTGGTATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000163905.8
ENSMUST00000164217.8
ENSMUST00000164618.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000166633.8
ENSMUST00000167195.8
ENSMUST00000167692.8
ENSMUST00000169729.8
ENSMUST00000171081.8
ENSMUST00000171847.8
CDS GCA 72 bp CAGAGCCAGGTAGCACAGGATGGCCAAAATGACAACTaGACAGGCTGTGATGAAGTAGCCAAAGGCGCTTTC +
Preference number: 6 (lower is better)
Translates to: QSQVAQDGQNDN*TGCDEVAKGAF
Trigger: GAAAGCGCCTTTGGCTACTTCATCACAGCCTGTGCAGTTGTCATTTTGGCCATCCTGTGCTACCTGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000164217.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171081.8
ENSMUST00000171847.8
CDS CAA 90 bp GGGACACAGATACTCTTAAGTATGGCTTTGATAGACTGGTTTCTGTaGGTGGGTGGAGAGTTGGGGCCTGGCACCCCAGATTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: GTQILLSMALIDWFL*VGGELGPGTPDSSL
Trigger: AAGAGAGGAATCTGGGGTGCCAGGCCCCAACTCTCCACCCACCAACAGAAACCAGTCTATCAAAGCCATACTTAAGAGTATCTGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051574.13
ENSMUST00000064889.13
ENSMUST00000097317.10
ENSMUST00000163492.8
ENSMUST00000164769.8
ENSMUST00000166119.8
ENSMUST00000167692.8
ENSMUST00000171847.8