RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC27A6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024600

Ensembl transcript IDs: ENSMUST00000025500.7

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAGCCTCATAACATAACCACGAGGCAAACAGCTCCCACTTCATaGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTGGGTCTA +
Preference number: 1 (lower is better)
Translates to: SQPHNITTRQTAPTS*PTVLQSGGLESLGL
Trigger: TAGACCCAAGCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCCTCGTGGTTATGTTATGAGGCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
3UTR CAA 90 bp CCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTaGGGTCTACAAAGCATTCTTCATGTACAATTTTCTTTCTATTTA +
Preference number: 2 (lower is better)
Translates to: PTSWPTVLQSGGLES*GLQSILHVQFSFYL
Trigger: TAAATAGAAAGAAAATTGTACATGAAGAATGCTTTGTAGACCCAAGCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
3UTR-3UTR CAA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGATGCAGAGTGGGGGCCTaGAAAGCTTGGGTCTACAAA +
Preference number: 3 (lower is better)
Translates to: TASPSRFRVNPHISPSPGCRVGA*KAWVYK
Trigger: TTTGTAGACCCAAGCTTTCAAGGCCCCCACTCTGCA...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp TCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTGGGTCTACAAAGCAGCGAAGGTTGGAGTTaGGGAAGGCCACCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SWPTVLQSGGLESLGLQSSEGWS*GRPPRS
Trigger: GCTGCGTGGTGGCCTTCCTCAACTCCAACCTTCGCT...GCTTTGTAGACCCAAGCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTCCAAGGAGAGACCCTaGGCTGTGGTACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESSKERP*AVVQRE
Trigger: CTCCCTCTGTACCACAGCTCAGGGTCTCTCCTTGGA...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp GGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAATGGGTTCACAGGTGTTaGTGCAGTGTAGGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: GKQLPLHGPLCCRVGALKWVHRC*CSVGGN
Trigger: ATTCCCTCCTACACTGCATCAACACCTGTGAACCCA...TTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp TCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTGGGTCTACAAAGCGGTTGCTTCCTGGTGTaGCTCAGGAACTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: SWPTVLQSGGLESLGLQSGCFLV*LRNLSS
Trigger: GCTGGATAAGTTCCTGAGCCACACCAGGAAGCAACC...GCTTTGTAGACCCAAGCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp ATAACCACGAGGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGAGTAGACTTGAGGCTTaGGGTGACATGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ITTRQTAPTSWPTVLQSGSRLEA*GDMMAW
Trigger: CCAAGCCATCATGTCACCTCAAGCCTCAAGTCTACT...CCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCCTCGTGGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp TCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTGGGTCTACAAAGCGGGAACAGAAGTTTCTaGAGGAAATGCAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SWPTVLQSGGLESLGLQSGNRSF*RKCRES
Trigger: GCTCTCCCTGCATTTCCTGCAGAAACTTCTGTTCCC...GCTTTGTAGACCCAAGCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTCCCAGTATGGTTCATaGAGACTATGTTTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESSQYGS*RLCFLR
Trigger: CCGAAGGAAACATAGTCTTCATGAACCATACTGGGA...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTGTCCGTTCCGCCATaGTTCATCTTTCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESLSVPP*FIFLKV
Trigger: GACTTTCAGAAAGATGAACCATGGCGGAACGGACAA...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCCGTGTTTTGGGAGACTaGGAAGTATTTCTTCTATGC +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESRVLGD*EVFLLC
Trigger: GCATAGAAGAAATACTTCCCAGTCTCCCAAAACACG...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCAACTCTGACGTGTTTTaGGAGACTGGGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESNSDVF*ETGKYF
Trigger: GAAATACTTCCCAGTCTCCCAAAACACGTCAGAGTT...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTCAACACTTGCAACTaGCTAATCACAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESFNTCN*LITAAL
Trigger: CAAAGCAGCTGTGATTAGCCAGTTGCAAGTGTTGAA...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGATCTTTAGCACACACGTaGCGCCCAACTCAACACATC +
Preference number: 4 (lower is better)
Translates to: TASPSRFRVNPHISPSPGSLAHT*RPTQHI
Trigger: GATGTGTTGAGTTGGGCGCCACGTGTGTGCTAAAGA...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp CAGAGTAAATCCTCACATTTCCCCGAGTCCCGGAGTCAGGTGGTAATACTATGGTGGGCAGGCGTAAGCTaGCAGAGATGTCACCACTTG +
Preference number: 4 (lower is better)
Translates to: QSKSSHFPESRSQVVILWWAGVS*QRCHHL
Trigger: CAAGTGGTGACATCTCTGCCAGCTTACGCCTGCCCA...CCATAGTATTACCACCTGACTCCGGGACTCGGGGAAATGTGAGGATTTACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp ATAACCACGAGGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGCAGCTTTTCTTGGAGTaGATCTATACCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ITTRQTAPTSWPTVLQSGQLFLE*IYTFWN
Trigger: GTTCCAGAAGGTATAGATTCACTCCAAGAAAAGCTG...CCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCCTCGTGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTCACGTTGTACTTCTTaGAATCATTCCAAAACTGGC +
Preference number: 4 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESSRCTS*NHSKTG
Trigger: GCCAGTTTTGGAATGATTGCAAGAAGTACAACGTGA...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGAAAGTTCTCCTGGTCTTaGAACATTAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: TASPSRFRVNPHISPSPGKFSWS*NIRSPV
Trigger: CACCGGAGACCTAATGTTCCAAGACCAGGAGAACTT...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGATACACGTTTGCTTCCTaGATGAAGTCCAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: TASPSRFRVNPHISPSPGYTFAS*MKSNLP
Trigger: TGGGAGGTTGGACTTCATCCAGGAAGCAAACGTGTA...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGATTTTCCTTCATAACCTaGCACACGCACACCGTACAC +
Preference number: 4 (lower is better)
Translates to: TASPSRFRVNPHISPSPGFSFIT*HTHTVH
Trigger: GTGTACGGTGTGCGTGTGCCAGGTTATGAAGGAAAA...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGATATTCACACGAGAAATaGGGAGACCAGGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TASPSRFRVNPHISPSPGYSHEK*GDQVLL
Trigger: AAGGAGAACCTGGTCTCCTCATTTCTCGTGTGAATA...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp CAGAGTAAATCCTCACATTTCCCCGAGTCCCGGAGTCAGGTGGTAATACTATGGAGCGACCTCTGTGGTTaGGACGTTTTCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QSKSSHFPESRSQVVILWSDLCG*DVFSFP
Trigger: TGGAAAGGAGAAAACGTCGCAACCACAGAGGTCGCT...CCATAGTATTACCACCTGACTCCGGGACTCGGGGAAATGTGAGGATTTACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ATAACCACGAGGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGCAATCATTCCAAAACTaGCTTGCGGAGAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ITTRQTAPTSWPTVLQSGQSFQN*LAENFF
Trigger: GAAGAAATTCTCCGCAAGCCAGTTTTGGAATGATTG...CCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCCTCGTGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp GGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAACCAATCTTCCCAGTATaGTTCATGAAGACTATGTTT +
Preference number: 4 (lower is better)
Translates to: GKQLPLHGPLCCRVGALKPIFPV*FMKTMF
Trigger: AAACATAGTCTTCATGAACCATACTGGGAAGATTGG...TTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp ATTGTCCACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAAAGGCTTTCCGTGGTTaGTTCCTGGTGTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IVHKEAHESSFIFPRKSSKAFRG*FLVWLR
Trigger: CCTGAGCCACACCAGGAAGCAACCACGGAAAGCCTT...TGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGTGGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ATAACCACGAGGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGAGACTCAGCTTTTCTTaGAGTGAATCTATACCTTCT +
Preference number: 4 (lower is better)
Translates to: ITTRQTAPTSWPTVLQSGRLSFS*SESIPS
Trigger: AGAAGGTATAGATTCACTCCAAGAAAAGCTGAGTCT...CCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCCTCGTGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp ATTGTCCACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAAGTTTCTGCAGGAAATaGAGGGAGAGCAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IVHKEAHESSFIFPRKSSSFCRK*RESSPA
Trigger: GGCTGGACTGCTCTCCCTGCATTTCCTGCAGAAACT...TGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGTGGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ATTGTCCACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAATGGCTTGGTGGTACTaGCTCATCAGAGGCGAGACT +
Preference number: 4 (lower is better)
Translates to: IVHKEAHESSFIFPRKSSMAWWY*LIRGET
Trigger: AGTCTCGCCTCTGATGAGCCAGTACCACCAAGCCAT...TGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGTGGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CCA 90 bp ACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAAAGTCCCGGTGACATGATGGCTTaGTGGTACTGGCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: TRKLTNLPSSFPGSHQSPGDMMA*WYWLIR
Trigger: TCTGATGAGCCAGTACCACCAAGCCATCATGTCACC...GGGACTTTGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp ACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAAAGTCCCGGAGGGTTATATAAATaGTGTCATCAGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRKLTNLPSSFPGSHQSPGGLYK*CHQLCS
Trigger: GCTGCACAGCTGATGACATCATTTATATAACCCTCC...GGGACTTTGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp GATTGTCCACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCGAAGTATTTCTTCTATaGTTCCAAGCAAATCTCCGC +
Preference number: 4 (lower is better)
Translates to: DCPQGSSRIFLHLSQEVIEVFLL*FQANLR
Trigger: GCGGAGATTTGCTTGGAAGCATAGAAGAAATACTTC...GATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGTGGACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR GCA 90 bp ACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAAAGTCCCAACAGAAGTCATTCCTaGTTTTCCTTCATAACCTGG +
Preference number: 4 (lower is better)
Translates to: TRKLTNLPSSFPGSHQSPNRSHS*FSFITW
Trigger: CCAGGTTATGAAGGAAAAGCAGGAATGACTTCTGTT...GGGACTTTGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR TCA 90 bp ATTGTCCACAAGGAAGCTCACGAATCTTCCTTCATCTTTCCCAGGAAGTCATCAGTTTCCATTTTGTCCTaGATTCTTAAAAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IVHKEAHESSFIFPRKSSVSILS*ILKNSG
Trigger: CCCACTGTTTTTAAGAATTCAGGACAAAATGGAAAC...TGATGACTTCCTGGGAAAGATGAAGGAAGATTCGTGAGCTTCCTTGTGGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CAA 90 bp ATAACCACGAGGCAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGAAGCGAAGGTTGGAGTaGAGGAAGGCCACCACGCAG +
Preference number: 5 (lower is better)
Translates to: ITTRQTAPTSWPTVLQSGKRRLE*RKATTQ
Trigger: CTGCGTGGTGGCCTTCCTCAACTCCAACCTTCGCTT...CCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTGCCTCGTGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CAA 90 bp GCGGCATCCTCAAGCCAGCCTCATAACATAACCACGAGGCAAACAGCTCCCACTACAGGAGCACCAGCCTaGTCCGTTCCGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: AASSSQPHNITTRQTAPTTGAPA*SVPPWF
Trigger: GAACCATGGCGGAACGGACAAGGCTGGTGCTCCTGT...AGTGGGAGCTGTTTGCCTCGTGGTTATGTTATGAGGCTGGCTTGAGGATGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 90 bp CTTCATAACCTGGCACACGCACACCGTACACGTTTGCTTCCTGGATaGAGTCCAACCTCCCAAGCACATCAGCGACCTCTGTGGTTGCGA +
Preference number: 5 (lower is better)
Translates to: LHNLAHAHRTRLLPG*SPTSQAHQRPLWLR
Trigger: TCGCAACCACAGAGGTCGCTGATGTGCTTGGGAGGTTGGACTTCATCCAGGAAGCAAACGTGTACGGTGTGCGTGTGCCAGGTTATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CAA 90 bp CAAACAGCTCCCACTTCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCCTAATCACAGCTGCTTaGGGTAGACCTGTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: QTAPTSWPTVLQSGGLESLITAA*GRPVVP
Trigger: TGGAACAACAGGTCTACCCAAAGCAGCTGTGATTAG...GCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGAAGTGGGAGCTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CAA 90 bp ACTGCTTCCCCATCTCGCTTCAGAGTAAATCCTCACATTTCCCCGAGTCCCGGACAGCGACCTCTGTGGTaGCGACGTTTTCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TASPSRFRVNPHISPSPGQRPLW*RRFLLS
Trigger: GGAAAGGAGAAAACGTCGCAACCACAGAGGTCGCTG...TCCGGGACTCGGGGAAATGTGAGGATTTACTCTGAAGCGAGATGGGGAAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 90 bp TCCTGCTTTTCCTTCATAACCTGGCACACGCACACCGTACACGTTTaGTTCCTGGATGAAGTCCAACCTCCCAAGCACATCAGCGACCTC +
Preference number: 5 (lower is better)
Translates to: SCFSFITWHTHTVHV*FLDEVQPPKHISDL
Trigger: GAGGTCGCTGATGTGCTTGGGAGGTTGGACTTCATCCAGGAAGCAAACGTGTACGGTGTGCGTGTGCCAGGTTATGAAGGAAAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 90 bp CTCGTAGGTGTAGACGTCCCCCTCATAAATGATGAAGGCTTTCCGTaGTTGCTTCCTGGTGTGGCTCAGGAACTTATCCAGCACCGTGAC +
Preference number: 5 (lower is better)
Translates to: LVGVDVPLINDEGFP*LLPGVAQELIQHRD
Trigger: GTCACGGTGCTGGATAAGTTCCTGAGCCACACCAGGAAGCAACCACGGAAAGCCTTCATCATTTATGAGGGGGACGTCTACACCTACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CAA 90 bp TCATGGCCCACTGTGCTGCAGAGTGGGGGCCTTGAAAGCTTGGGTCTACAAAGCAGATCCCTTCAACACTaGCAACTGGCTAATCACAGC +
Preference number: 5 (lower is better)
Translates to: SWPTVLQSGGLESLGLQSRSLQH*QLANHS
Trigger: GCTGTGATTAGCCAGTTGCAAGTGTTGAAGGGATCT...GCTTTGTAGACCCAAGCTTTCAAGGCCCCCACTCTGCAGCACAGTGGGCCATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 90 bp GCTGTGCAGCCAAACGCCCATAGCCCAACAGATCCCTTCAACACTTaGAACTGGCTAATCACAGCTGCTTTGGGTAGACCTGTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: AVQPNAHSPTDPFNT*NWLITAALGRPVVP
Trigger: TGGAACAACAGGTCTACCCAAAGCAGCTGTGATTAGCCAGTTGCAAGTGTTGAAGGGATCTGTTGGGCTATGGGCGTTTGGCTGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 90 bp CGTGGCGCCCAACTCAACACATCCACCAATTCCAAGGAGAGACCCTaGGCTGTGGTACAGAGGGAGGGTTATATAAATGATGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: RGAQLNTSTNSKERP*AVVQREGYINDVIS
Trigger: GCTGATGACATCATTTATATAACCCTCCCTCTGTACCACAGCTCAGGGTCTCTCCTTGGAATTGGTGGATGTGTTGAGTTGGGCGCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 90 bp CAGCCAAACGCCCATAGCCCAACAGATCCCTTCAACACTTGCAACTaGCTAATCACAGCTGCTTTGGGTAGACCTGTTGTTCCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: QPNAHSPTDPFNTCN*LITAALGRPVVPEV
Trigger: TACCTCTGGAACAACAGGTCTACCCAAAGCAGCTGTGATTAGCCAGTTGCAAGTGTTGAAGGGATCTGTTGGGCTATGGGCGTTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS-3UTR CAA 90 bp CAGAGTAAATCCTCACATTTCCCCGAGTCCCGGAGTCAGGTGGTAATACTATGGACATCAAAGAGCAGCTaGCTTTTCGTGTGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: QSKSSHFPESRSQVVILWTSKSS*LFVCVS
Trigger: GGACACGCACACGAAAAGCAAGCTGCTCTTTGATGT...CCATAGTATTACCACCTGACTCCGGGACTCGGGGAAATGTGAGGATTTACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 90 bp TGGCTTGGTGGTACTGGCTCATCAGAGGCGAGACTCAGCTTTTCTTaGAGTGAATCTATACCTTCTGGAACAGAATCCTTCATTCCCCAA +
Preference number: 5 (lower is better)
Translates to: WLGGTGSSEARLSFS*SESIPSGTESFIPQ
Trigger: TTGGGGAATGAAGGATTCTGTTCCAGAAGGTATAGATTCACTCCAAGAAAAGCTGAGTCTCGCCTCTGATGAGCCAGTACCACCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 90 bp TGGTGGTACTGGCTCATCAGAGGCGAGACTCAGCTTTTCTTGGAGTaGATCTATACCTTCTGGAACAGAATCCTTCATTCCCCAAACTCT +
Preference number: 5 (lower is better)
Translates to: WWYWLIRGETQLFLE*IYTFWNRILHSPNS
Trigger: AGAGTTTGGGGAATGAAGGATTCTGTTCCAGAAGGTATAGATTCACTCCAAGAAAAGCTGAGTCTCGCCTCTGATGAGCCAGTACCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 90 bp AATAAACGAAGTTCTCCTGGTCTTGGAACATTAGGTCTCCGGTGTTaGAGTACACGTCTCCCTTCCGAAACACATCAAAGAGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: NKRSSPGLGTLGLRC*STRLPSETHQRAAC
Trigger: GCAAGCTGCTCTTTGATGTGTTTCGGAAGGGAGACGTGTACTTCAACACCGGAGACCTAATGTTCCAAGACCAGGAGAACTTCGTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 90 bp TTCTCCTTTTCTCACACAGGAGCACCAGCCTTGTCCGTTCCGCCATaGTTCATCTTTCTGAAAGTCATACTTGATCAACTCAAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FSFSHTGAPALSVPP*FIFLKVILDQLKGE
Trigger: TTCTCCTTTGAGTTGATCAAGTATGACTTTCAGAAAGATGAACCATGGCGGAACGGACAAGGCTGGTGCTCCTGTGTGAGAAAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 90 bp ACCTTCTGGAACAGAATCCTTCATTCCCCAAACTCTGACGTGTTTTaGGAGACTGGGAAGTATTTCTTCTATGCTTCCAAGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: TFWNRILHSPNSDVF*ETGKYFFYASKQIS
Trigger: GGAGATTTGCTTGGAAGCATAGAAGAAATACTTCCCAGTCTCCCAAAACACGTCAGAGTTTGGGGAATGAAGGATTCTGTTCCAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 90 bp GTGAATCTATACCTTCTGGAACAGAATCCTTCATTCCCCAAACTCTaGCGTGTTTTGGGAGACTGGGAAGTATTTCTTCTATGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VNLYLLEQNPSFPKL*RVLGDWEVFLLCFQ
Trigger: TTGGAAGCATAGAAGAAATACTTCCCAGTCTCCCAAAACACGTCAGAGTTTGGGGAATGAAGGATTCTGTTCCAGAAGGTATAGATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CAA 90 bp CCAAGCAAATCTCCGCCCACCACCACGGCAGTGGGTTCACAGGTGTaGATGCAGTGTAGGAGGGAATCGAAGCGAAGGTTGGAGTTGAGG +
Preference number: 6 (lower is better)
Translates to: PSKSPPTTTAVGSQV*MQCRRESKRRLELR
Trigger: CCTCAACTCCAACCTTCGCTTCGATTCCCTCCTACACTGCATCAACACCTGTGAACCCACTGCCGTGGTGGTGGGCGGAGATTTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp CTGGCACACGCACACCGTACACGTTTGCTTCCTGGATaGAGTCCAACCTCCCAAGCACATCAGCGACCTCTG +
Preference number: 6 (lower is better)
Translates to: LAHAHRTRLLPG*SPTSQAHQRPL
Trigger: CAGAGGTCGCTGATGTGCTTGGGAGGTTGGACTTCATCCAGGAAGCAAACGTGTACGGTGTGCGTGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp ACCACGCAGCCCAGTTTAGCCAGGCCAAACCACACATaGACGAAGTCGGGCTCGTTGCTCATCAACAAAGCC +
Preference number: 6 (lower is better)
Translates to: TTQPSLARPNHT*TKSGSLLINKA
Trigger: GGCTTTGTTGATGAGCAACGAGCCCGACTTCGTTCATGTGTGGTTTGGCCTGGCTAAACTGGGCTGCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 72 bp TCCCAGAAATACGGGAACAGAAGTTTCTGCAGGAAATaGAGGGAGAGCAGTCCAGCCCCCAATCCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: SQKYGNRSFCRK*RESSPAPNPVS
Trigger: GCTCACAGGATTGGGGGCTGGACTGCTCTCCCTGCATTTCCTGCAGAAACTTCTGTTCCCGTATTTCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CAA 72 bp GTGTTGATGCAGTGTAGGAGGGAATCGAAGCGAAGGTaGGAGTTGAGGAAGGCCACCACGCAGCCCAGTTTA +
Preference number: 6 (lower is better)
Translates to: VLMQCRRESKRR*ELRKATTQPSL
Trigger: TAAACTGGGCTGCGTGGTGGCCTTCCTCAACTCCAACCTTCGCTTCGATTCCCTCCTACACTGCATCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CAA 90 bp GTAGGTGTAGACGTCCCCCTCATAAATGATGAAGGCTTTCCGTGGTaGCTTCCTGGTGTGGCTCAGGAACTTATCCAGCACCGTGACCAG +
Preference number: 6 (lower is better)
Translates to: VGVDVPLINDEGFPW*LPGVAQELIQHRDQ
Trigger: CTGGTCACGGTGCTGGATAAGTTCCTGAGCCACACCAGGAAGCAACCACGGAAAGCCTTCATCATTTATGAGGGGGACGTCTACACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 72 bp TCCTTCATAACCTGGCACACGCACACCGTACACGTTTaGTTCCTGGATGAAGTCCAACCTCCCAAGCACATC +
Preference number: 6 (lower is better)
Translates to: SFITWHTHTVHV*FLDEVQPPKHI
Trigger: GATGTGCTTGGGAGGTTGGACTTCATCCAGGAAGCAAACGTGTACGGTGTGCGTGTGCCAGGTTATGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CAA 72 bp GACGTCCCCCTCATAAATGATGAAGGCTTTCCGTGGTaGCTTCCTGGTGTGGCTCAGGAACTTATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: DVPLINDEGFPW*LPGVAQELIQH
Trigger: GTGCTGGATAAGTTCCTGAGCCACACCAGGAAGCAACCACGGAAAGCCTTCATCATTTATGAGGGGGACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp ACCCTGAGCTGTGGTACAGAGGGAGGGTTATATAAATaGTGTCATCAGCTGTGCAGCCAAACGCCCATAGCC +
Preference number: 6 (lower is better)
Translates to: TLSCGTEGGLYK*CHQLCSQTPIA
Trigger: GGCTATGGGCGTTTGGCTGCACAGCTGATGACATCATTTATATAACCCTCCCTCTGTACCACAGCTCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 72 bp CCAAACGCCCATAGCCCAACAGATCCCTTCAACACTTaGAACTGGCTAATCACAGCTGCTTTGGGTAGACCT +
Preference number: 6 (lower is better)
Translates to: PNAHSPTDPFNT*NWLITAALGRP
Trigger: AGGTCTACCCAAAGCAGCTGTGATTAGCCAGTTGCAAGTGTTGAAGGGATCTGTTGGGCTATGGGCGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CAA 72 bp ACCAGGTTCTCCTTTTCTCACACAGGAGCACCAGCCTaGTCCGTTCCGCCATGGTTCATCTTTCTGAAAGTC +
Preference number: 6 (lower is better)
Translates to: TRFSFSHTGAPA*SVPPWFIFLKV
Trigger: GACTTTCAGAAAGATGAACCATGGCGGAACGGACAAGGCTGGTGCTCCTGTGTGAGAAAAGGAGAACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 72 bp CAGAAATCATCCCAGAAATACGGGAACAGAAGTTTCTaGAGGAAATGCAGGGAGAGCAGTCCAGCCCCCAAT +
Preference number: 6 (lower is better)
Translates to: QKSSQKYGNRSF*RKCRESSPAPN
Trigger: ATTGGGGGCTGGACTGCTCTCCCTGCATTTCCTGCAGAAACTTCTGTTCCCGTATTTCTGGGATGATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS GCA 72 bp TTGTCTCCACACATCACTGCTCAAACCGTTTCCAACTaGCAAACGTACCCGATGGTCCTTTTCCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LSPHITAQTVSN*QTYPMVLFPFS
Trigger: AGAGAAGGGGAAAAGGACCATCGGGTACGTTTGGCAGTTGGAAACGGTTTGAGCAGTGATGTGTGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 72 bp GCCCATAGCCCAACAGATCCCTTCAACACTTGCAACTaGCTAATCACAGCTGCTTTGGGTAGACCTGTTGTT +
Preference number: 6 (lower is better)
Translates to: AHSPTDPFNTCN*LITAALGRPVV
Trigger: AACAACAGGTCTACCCAAAGCAGCTGTGATTAGCCAGTTGCAAGTGTTGAAGGGATCTGTTGGGCTATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 72 bp TCTCACACAGGAGCACCAGCCTTGTCCGTTCCGCCATaGTTCATCTTTCTGAAAGTCATACTTGATCAACTC +
Preference number: 6 (lower is better)
Translates to: SHTGAPALSVPP*FIFLKVILDQL
Trigger: GAGTTGATCAAGTATGACTTTCAGAAAGATGAACCATGGCGGAACGGACAAGGCTGGTGCTCCTGTGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp AGCCGAAGAAGGGATTCTTCTTATTCACACGAGAAATaGGGAGACCAGGTTCTCCTTTTCTCACACAGGAGC +
Preference number: 6 (lower is better)
Translates to: SRRRDSSYSHEK*GDQVLLFSHRS
Trigger: GCTCCTGTGTGAGAAAAGGAGAACCTGGTCTCCTCATTTCTCGTGTGAATAAGAAGAATCCCTTCTTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp TGGCTCATCAGAGGCGAGACTCAGCTTTTCTTGGAGTaGATCTATACCTTCTGGAACAGAATCCTTCATTCC +
Preference number: 6 (lower is better)
Translates to: WLIRGETQLFLE*IYTFWNRILHS
Trigger: GGAATGAAGGATTCTGTTCCAGAAGGTATAGATTCACTCCAAGAAAAGCTGAGTCTCGCCTCTGATGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp CAACTCAACACATCCACCAATTCCAAGGAGAGACCCTaGGCTGTGGTACAGAGGGAGGGTTATATAAATGAT +
Preference number: 6 (lower is better)
Translates to: QLNTSTNSKERP*AVVQREGYIND
Trigger: ATCATTTATATAACCCTCCCTCTGTACCACAGCTCAGGGTCTCTCCTTGGAATTGGTGGATGTGTTGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 72 bp AAATTTGCTCTCCCGACAGATCCAATCTTCCCAGTATaGTTCATGAAGACTATGTTTCCTTCGGTAGCTCCG +
Preference number: 6 (lower is better)
Translates to: KFALPTDPIFPV*FMKTMFPSVAP
Trigger: CGGAGCTACCGAAGGAAACATAGTCTTCATGAACCATACTGGGAAGATTGGATCTGTCGGGAGAGCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS TCA 72 bp CACCAGCCTTGTCCGTTCCGCCATGGTTCATCTTTCTaGAAGTCATACTTGATCAACTCAAAGGAGAAAAAG +
Preference number: 6 (lower is better)
Translates to: HQPCPFRHGSSF*KSYLINSKEKK
Trigger: CTTTTTCTCCTTTGAGTTGATCAAGTATGACTTTCAGAAAGATGAACCATGGCGGAACGGACAAGGCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7
CDS CCA 72 bp AACAGAATCCTTCATTCCCCAAACTCTGACGTGTTTTaGGAGACTGGGAAGTATTTCTTCTATGCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: NRILHSPNSDVF*ETGKYFFYASK
Trigger: CTTGGAAGCATAGAAGAAATACTTCCCAGTCTCCCAAAACACGTCAGAGTTTGGGGAATGAAGGATTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025500.7