Pregenerated sensors for SLC27A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027359Ensembl transcript IDs: ENSMUST00000061491.14, ENSMUST00000141482.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCCCGCGCCACTTGGTTaGTGCGCCGGTCCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNPAPLG*CAGPPG Trigger: CCCAGGTGGACCGGCGCAGCAACCAAGTGGCGCGGG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAGCGCCCGCGCCACTTaGTTGCTGCGCCGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSARAT*LLRRST Trigger: GGTGGACCGGCGCAGCAACCAAGTGGCGCGGGCGCT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTGTCGTAGGCCCAGTTaGTCGTGCAGCGCCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNCRRPS*SCSARA Trigger: GGCGCGGGCGCTGCACGATCAACTGGGCCTACGACA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR GCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGCGCCACTTGGTTGCTaGGCCGGTCCACCTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNAPLGC*AGPPGR Trigger: ACGCCCAGGTGGACCGGCGCAGCAACCAAGTGGCGC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGGAAGGCCCGCAGGATaGTACGCACGGGTCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNGRPAG*YARVAA Trigger: AGCGGCGACCCGTGCGTACCATCCTGCGGGCCTTCC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTGGGACAGCCCAGTTTaGGCAGTCCCAGCCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNWDSPV*AVPARS Trigger: GGATCTGGCTGGGACTGCTCAAACTGGGCTGTCCCA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTTCGCCCCGCAGCATTaGAAGCAGTGCAGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNFAPQH*KQCSRD Trigger: GTCTCTGCTGCACTGCTTTCAATGCTGCGGGGCGAA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCCAAAACTGGCTGGCTaGGAATTTGCTCCGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNPKLAG*EFAPQS Trigger: GCTTTGCGGAGCAAATTCTCAGCCAGCCAGTTTTGG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCGTCCCAAAACTGGCTaGCTGAGAATTTGCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNRPKTG*LRICSA Trigger: TGCGGAGCAAATTCTCAGCCAGCCAGTTTTGGGACG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCAGTCGTCCCAAAACTaGCTGGCTGAGAATTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNQSSQN*LAENLL Trigger: GAGCAAATTCTCAGCCAGCCAGTTTTGGGACGACTG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR GCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGTTGCCTTCAGTGGATaGGTAGAACTCATACACGTG | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNVAFSG*VELIHV Trigger: CACGTGTATGAGTTCTACGCATCCACTGAAGGCAAC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACATCCTTTTTCAGGGTTaGAAGAACCTCCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNILFQG*KNLLHS Trigger: GCTGTGGAGGAGGTTCTTCCAACCCTGAAAAAGGAT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTCTCCACGTCATACTTaGTCAGCTCATACCTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSPRHT*SAHTLQ Trigger: TTGCAAGGTATGAGCTGATCAAGTATGACGTGGAGA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCACCTTTGGGGACTTTaGTGCAATATCCATTTGCGT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNHLWGL*CNIHLR Trigger: ACGCAAATGGATATTGCATCAAAGTCCCCAAAGGTG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAGTTCACCAATGTACTaGATGACCGTGACGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSSPMY*MTVTLY Trigger: ATACAACGTCACGGTCATTCAGTACATTGGTGAACT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTACTCCGCGATGTGTTaGAAGAGTTTCTTTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNYSAMC*KSFFPL Trigger: CAATGGAAAGAAACTCTTTCAACACATCGCGGAGTA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR GCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACATGATGATTGATGGTTaGCGCTTTTGGAAGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNMMIDG*RFWKTC Trigger: ACAGGTCTTCCAAAAGCGGCAACCATCAATCATCAT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCAATGTTGCCTTCAGTaGATGCGTAGAACTCATACA | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNQCCLQ*MRRTHT Trigger: TGTATGAGTTCTACGCATCCACTGAAGGCAACATTG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCTTTTGGAAGACCTGTaGTTCCCGAAGTATAAATGT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNLLEDL*FPKYKC Trigger: ACATTTATACTTCGGGAACCACAGGTCTTCCAAAAG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR GCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAGTATAAATGTATACTaGTGGCGTGGTAAAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSINVY*WRGKSD Trigger: GTCACTTTTACCACGCCAGCAGTATACATTTATACT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACATAAATGTATACTGCTaGCGTGGTAAAAGTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNINVYC*RGKSDF Trigger: GAAGTCACTTTTACCACGCCAGCAGTATACATTTAT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAGCATAGCCAATAAATaGTGTGAGCTGTGTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSIANK*CELCDF Trigger: AAAATCACACAGCTCACACCATTTATTGGCTATGCT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS GCA 90 bp | GGAAGGCCCGCAGGATGGTACGCACGGGTCGCCGCTGCCGGTAGCTaGGCACCCGCCGGGCCATGTTGGCCAGCCGCAGGAAGTACCGCA | + |
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Preference number: 5 (lower is better) Translates to: GRPAGWYARVAAAGS*APAGPCWPAAGSTA Trigger: TGCGGTACTTCCTGCGGCTGGCCAACATGGCCCGGCGGGTGCGCAGCTACCGGCAGCGGCGACCCGTGCGTACCATCCTGCGGGCCTTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CCA 90 bp | GCACGGGTCGCCGCTGCCGGTAGCTGCGCACCCGCCGGGCCATGTTaGCCAGCCGCAGGAAGTACCGCACATCTTGGAGGAGGTAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ARVAAAGSCAPAGPC*PAAGSTAHLGGGRG Trigger: GCCCCTACCTCCTCCAAGATGTGCGGTACTTCCTGCGGCTGGCCAACATGGCCCGGCGGGTGCGCAGCTACCGGCAGCGGCGACCCGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CCA 90 bp | GCTTGTGTGGGGTCTTGCGCGCTTGTTCCAGGAAGGCCCGCAGGATaGTACGCACGGGTCGCCGCTGCCGGTAGCTGCGCACCCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: ACVGSCALVPGRPAG*YARVAAAGSCAPAG Trigger: CCCGGCGGGTGCGCAGCTACCGGCAGCGGCGACCCGTGCGTACCATCCTGCGGGCCTTCCTGGAACAAGCGCGCAAGACCCCACACAAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 90 bp | GCGCCCGCGCCACTTGGTTGCTGCGCCGGTCCACCTGGGCGTAGGTaGGCGTCTCGTCTCGGAACAGCAGGAAGGGCTTGTGTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: APAPLGCCAGPPGRR*ASRLGTAGRACVGS Trigger: AGACCCCACACAAGCCCTTCCTGCTGTTCCGAGACGAGACGCTCACCTACGCCCAGGTGGACCGGCGCAGCAACCAAGTGGCGCGGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 90 bp | TTGCCCATGAAGAGGGCTACGCAATCCCCCTGTCGTAGGCCCAGTTaGTCGTGCAGCGCCCGCGCCACTTGGTTGCTGCGCCGGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: LPMKRATQSPCRRPS*SCSARATWLLRRST Trigger: GGTGGACCGGCGCAGCAACCAAGTGGCGCGGGCGCTGCACGATCAACTGGGCCTACGACAGGGGGATTGCGTAGCCCTCTTCATGGGCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CCA 90 bp | GGCGTAGGTGAGCGTCTCGTCTCGGAACAGCAGGAAGGGCTTGTGTaGGGTCTTGCGCGCTTGTTCCAGGAAGGCCCGCAGGATGGTACG | + |
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Preference number: 5 (lower is better) Translates to: GVGERLVSEQQEGLV*GLARLFQEGPQDGT Trigger: CGTACCATCCTGCGGGCCTTCCTGGAACAAGCGCGCAAGACCCCACACAAGCCCTTCCTGCTGTTCCGAGACGAGACGCTCACCTACGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS GCA 90 bp | AGTAGCCCCAACCACGATGCATCCGTGAAGGCCGATCATGAGCGCTaGACTGTGGTACAGGGGCATTGTGGTATAGATGACATCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SSPNHDASVKADHER*TVVQGHCGIDDILG Trigger: GCCCAGGATGTCATCTATACCACAATGCCCCTGTACCACAGTGCAGCGCTCATGATCGGCCTTCACGGATGCATCGTGGTTGGGGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGCCCGCGCCACTTGGTaGCTGCGCCGGTCCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNARATW*LRRSTW Trigger: CCAGGTGGACCGGCGCAGCAACCAAGTGGCGCGGGC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCAGCGCCCGCGCCACTaGGTTGCTGCGCCGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNQRPRH*VAAPVH Trigger: GTGGACCGGCGCAGCAACCAAGTGGCGCGGGCGCTG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 90 bp | AATTTGCTCCGCAAAGCTAAAGTAGCCCCAACCACGATGCATCCGTaGAGGCCGATCATGAGCGCTGCACTGTGGTACAGGGGCATTGTG | + |
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Preference number: 5 (lower is better) Translates to: NLLRKAKVAPTTMHP*RPIMSAALWYRGIV Trigger: CACAATGCCCCTGTACCACAGTGCAGCGCTCATGATCGGCCTTCACGGATGCATCGTGGTTGGGGCTACTTTAGCTTTGCGGAGCAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS GCA 90 bp | CAAGAGTCCAACCTCACCTTTGGGGACTTTGATGCAATATCCATTTaGGTCACGGACCGGCTCGTCCTTCTCCACGTCATACTTGATCAG | + |
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Preference number: 5 (lower is better) Translates to: QESNLTFGDFDAISI*VTDRLVLLHVILDQ Trigger: CTGATCAAGTATGACGTGGAGAAGGACGAGCCGGTCCGTGACGCAAATGGATATTGCATCAAAGTCCCCAAAGGTGAGGTTGGACTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGGCTTGTGTGGGGTCTaGCGCGCTTGTTCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNGLCGV*RACSRK Trigger: CTTCCTGGAACAAGCGCGCAAGACCCCACACAAGCC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAACAGCAGGAAGGGCTaGTGTGGGGTCTTGCGCGCT | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNNSRKG*CGVLRA Trigger: AGCGCGCAAGACCCCACACAAGCCCTTCCTGCTGTT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGAAGTACCGCACATCTaGGAGGAGGTAGGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNEVPHI*EEVGAA Trigger: TGCTGCCCCTACCTCCTCCAAGATGTGCGGTACTTC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACATGGGACAGCCCAGTTaGAGCAGTCCCAGCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNMGQPS*SSPSQI Trigger: GATCTGGCTGGGACTGCTCAAACTGGGCTGTCCCAT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCTTCGCCCCGCAGCATaGAAAGCAGTGCAGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNLRPAA*KAVQQR Trigger: TCTCTGCTGCACTGCTTTCAATGCTGCGGGGCGAAG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGGTTTCTGCGGTGTGTaGCACAGGTACCGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNGFCGV*HRYRSS Trigger: ACTGCTTCGGTACCTGTGCAACACACCGCAGAAACC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS GCA 90 bp | TCCCGACAGCACCGATTTTCCTTGGATAGTTCACAAATCCAATGTTaGCTTCAGTGGATGCGTAGAACTCATACACGTGGATGTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SRQHRFSLDSSQIQC*LQWMRRTHTRGCPQ Trigger: TTGGGGACATCCACGTGTATGAGTTCTACGCATCCACTGAAGGCAACATTGGATTTGTGAACTATCCAAGGAAAATCGGTGCTGTCGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CCA 90 bp | TTCTTTGATCTTGAGGGAGGCCATCCCAATTCGACCCTCATGACCTaGCACAGGCACGCCATACACATTCACTTCTTCAACAAAATCTAC | + |
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Preference number: 5 (lower is better) Translates to: FFDLEGGHPNSTLMT*HRHAIHIHFFNKIY Trigger: GTAGATTTTGTTGAAGAAGTGAATGTGTATGGCGTGCCTGTGCCAGGTCATGAGGGTCGAATTGGGATGGCCTCCCTCAAGATCAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTTCTTTGTAGGTAGTTaGCTCTCCCGACAGCACCGA | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNFFVGS*LSRQHR Trigger: TCGGTGCTGTCGGGAGAGCAAACTACCTACAAAGAA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTTGATGACTGTGGGATaGAAGCCCTCTTCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNLMTVG*KPSSIR Trigger: CCTGATGGAAGAGGGCTTCAATCCCACAGTCATCAA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGTGAGCTGTGTGATTTaGCAAACCAAGAGTCCAACC | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNVSCVI*QTKSPT Trigger: GGTTGGACTCTTGGTTTGCAAAATCACACAGCTCAC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTCCATCAGGGTCACTTaGCGGTGTTTAAAAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSIRVT*RCLKVP Trigger: TGGGACTTTTAAACACCGCAAAGTGACCCTGATGGA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACTCACCTTTGGGGACTTaGATGCAATATCCATTTGCG | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSPLGT*MQYPFA Trigger: CGCAAATGGATATTGCATCAAAGTCCCCAAAGGTGA...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAGTCCAACCTCACCTTaGGGGACTTTGATGCAATAT | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNSPTSP*GTLMQY Trigger: ATATTGCATCAAAGTCCCCAAAGGTGAGGTTGGACT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACCAGCACCGATTTTCCTaGGATAGTTCACAAATCCAA | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNQHRFS*DSSQIQ Trigger: TTGGATTTGTGAACTATCCAAGGAAAATCGGTGCTG...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACGTACTCCGCGATGTGTaGAAAGAGTTTCTTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNVLRDV*KEFLSI Trigger: AATGGAAAGAAACTCTTTCAACACATCGCGGAGTAC...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTCTGCGAGGTCTATCGAGTTTCTTTCTGGAAATGTCATGAGCTAAACAAATACAAGGTATCTTaGATGACTGTGGGATTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KWLCEVYRVSFWKCHELNKYKVS*MTVGLK Trigger: CTTCAATCCCACAGTCATCAAAGATACCTTGTATTT...GTTTAGCTCATGACATTTCCAGAAAGAAACTCGATAGACCTCGCAGAGCCACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CCA 72 bp | GCCGCTGCCGGTAGCTGCGCACCCGCCGGGCCATGTTaGCCAGCCGCAGGAAGTACCGCACATCTTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAAGSCAPAGPC*PAAGSTAHLGG Trigger: TCCTCCAAGATGTGCGGTACTTCCTGCGGCTGGCCAACATGGCCCGGCGGGTGCGCAGCTACCGGCAGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CCA 72 bp | GGGTCTTGCGCGCTTGTTCCAGGAAGGCCCGCAGGATaGTACGCACGGGTCGCCGCTGCCGGTAGCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GSCALVPGRPAG*YARVAAAGSCA Trigger: TGCGCAGCTACCGGCAGCGGCGACCCGTGCGTACCATCCTGCGGGCCTTCCTGGAACAAGCGCGCAAGACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 72 bp | ACCGCACATCTTGGAGGAGGTAGGGGCAGCAGCAGGTaGGCAGCAGAGGCAGCAGCAGCAGCCCCGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TAHLGGGRGSSR*AAEAAAAAPPG Trigger: GCCTGGCGGGGCTGCTGCTGCTGCCTCTGCTGCTCACCTGCTGCTGCCCCTACCTCCTCCAAGATGTGCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CAA 90 bp | CTCGTCTCGGAACAGCAGGAAGGGCTTGTGTGGGGTCTTGCGCGCTaGTTCCAGGAAGGCCCGCAGGATGGTACGCACGGGTCGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVSEQQEGLVWGLAR*FQEGPQDGTHGSPL Trigger: CAGCGGCGACCCGTGCGTACCATCCTGCGGGCCTTCCTGGAACAAGCGCGCAAGACCCCACACAAGCCCTTCCTGCTGTTCCGAGACGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 72 bp | AAGAGGGCTACGCAATCCCCCTGTCGTAGGCCCAGTTaGTCGTGCAGCGCCCGCGCCACTTGGTTGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: KRATQSPCRRPS*SCSARATWLLR Trigger: GCGCAGCAACCAAGTGGCGCGGGCGCTGCACGATCAACTGGGCCTACGACAGGGGGATTGCGTAGCCCTCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 72 bp | CCACTTGGTTGCTGCGCCGGTCCACCTGGGCGTAGGTaGGCGTCTCGTCTCGGAACAGCAGGAAGGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLGCCAGPPGRR*ASRLGTAGRAC Trigger: ACAAGCCCTTCCTGCTGTTCCGAGACGAGACGCTCACCTACGCCCAGGTGGACCGGCGCAGCAACCAAGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CAA 90 bp | GTGAGCGTCTCGTCTCGGAACAGCAGGAAGGGCTTGTGTGGGGTCTaGCGCGCTTGTTCCAGGAAGGCCCGCAGGATGGTACGCACGGGT | + |
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Preference number: 6 (lower is better) Translates to: VSVSSRNSRKGLCGV*RACSRKARRMVRTG Trigger: ACCCGTGCGTACCATCCTGCGGGCCTTCCTGGAACAAGCGCGCAAGACCCCACACAAGCCCTTCCTGCTGTTCCGAGACGAGACGCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 72 bp | CCAGCCAGATCCACACGTAGGCCGGCTCATTGCCCATaGAGAGGGCTACGCAATCCCCCTGTCGTAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PARSTRRPAHCP*RGLRNPPVVGP Trigger: TGGGCCTACGACAGGGGGATTGCGTAGCCCTCTTCATGGGCAATGAGCCGGCCTACGTGTGGATCTGGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 72 bp | TCTGGGGAGGCCAGCAGCACCTTCGCCCCGCAGCATTaGAAGCAGTGCAGCAGAGACTTGGCACGAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SGEASSTFAPQH*KQCSRDLARML Trigger: CAACATTCGTGCCAAGTCTCTGCTGCACTGCTTTCAATGCTGCGGGGCGAAGGTGCTGCTGGCCTCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CAA 72 bp | ATCTGGGGAGGCCAGCAGCACCTTCGCCCCGCAGCATaGAAAGCAGTGCAGCAGAGACTTGGCACGAATGTT | + |
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Preference number: 6 (lower is better) Translates to: IWGGQQHLRPAA*KAVQQRLGTNV Trigger: AACATTCGTGCCAAGTCTCTGCTGCACTGCTTTCAATGCTGCGGGGCGAAGGTGCTGCTGGCCTCCCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS TCA 72 bp | CGCAAAGCTAAAGTAGCCCCAACCACGATGCATCCGTaGAGGCCGATCATGAGCGCTGCACTGTGGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: RKAKVAPTTMHP*RPIMSAALWYR Trigger: CCTGTACCACAGTGCAGCGCTCATGATCGGCCTTCACGGATGCATCGTGGTTGGGGCTACTTTAGCTTTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CCA 72 bp | CTTGAGGGAGGCCATCCCAATTCGACCCTCATGACCTaGCACAGGCACGCCATACACATTCACTTCTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LEGGHPNSTLMT*HRHAIHIHFFN Trigger: GTTGAAGAAGTGAATGTGTATGGCGTGCCTGTGCCAGGTCATGAGGGTCGAATTGGGATGGCCTCCCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 90 bp | GACCTCCACGACTCCGGGGTGGGTTCCGCCGACACTCCGTCTACTTaGTCCAGTATTGTGTCCACACCATTTGTGTTAGAAGTTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: DLHDSGVGSADTPST*SSIVSTPFVLEVLL Trigger: AAGCAGAACTTCTAACACAAATGGTGTGGACACAATACTGGACAAAGTAGACGGAGTGTCGGCGGAACCCACCCCGGAGTCGTGGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 90 bp | GGTCACTTTGCGGTGTTTAAAAGTCCCAGTGATCTCAATGGTATCTaGTATCCTCAGGAACCGAGGCCTCGCGTAACTGGGCAGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: GHFAVFKSPSDLNGI*YPQEPRPRVTGQVL Trigger: GAGTACCTGCCCAGTTACGCGAGGCCTCGGTTCCTGAGGATACAAGATACCATTGAGATCACTGGGACTTTTAAACACCGCAAAGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS TCA 72 bp | TGCAAACCAAGAGTCCAACCTCACCTTTGGGGACTTTaGTGCAATATCCATTTGCGTCACGGACCGGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: CKPRVQPHLWGL*CNIHLRHGPAR Trigger: ACGAGCCGGTCCGTGACGCAAATGGATATTGCATCAAAGTCCCCAAAGGTGAGGTTGGACTCTTGGTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS GCA 72 bp | AACCTCACCTTTGGGGACTTTGATGCAATATCCATTTaGGTCACGGACCGGCTCGTCCTTCTCCACGTCATA | + |
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Preference number: 6 (lower is better) Translates to: NLTFGDFDAISI*VTDRLVLLHVI Trigger: TATGACGTGGAGAAGGACGAGCCGGTCCGTGACGCAAATGGATATTGCATCAAAGTCCCCAAAGGTGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CCA 72 bp | TATCTTGTATCCTCAGGAACCGAGGCCTCGCGTAACTaGGCAGGTACTCCGCGATGTGTTGAAAGAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: YLVSSGTEASRN*AGTPRCVERVS Trigger: AGAAACTCTTTCAACACATCGCGGAGTACCTGCCCAGTTACGCGAGGCCTCGGTTCCTGAGGATACAAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 72 bp | TTGCAAACCAAGAGTCCAACCTCACCTTTGGGGACTTaGATGCAATATCCATTTGCGTCACGGACCGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LQTKSPTSPLGT*MQYPFASRTGS Trigger: CGAGCCGGTCCGTGACGCAAATGGATATTGCATCAAAGTCCCCAAAGGTGAGGTTGGACTCTTGGTTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 72 bp | GCGGTGTTTAAAAGTCCCAGTGATCTCAATGGTATCTaGTATCCTCAGGAACCGAGGCCTCGCGTAACTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVFKSPSDLNGI*YPQEPRPRVTG Trigger: CCCAGTTACGCGAGGCCTCGGTTCCTGAGGATACAAGATACCATTGAGATCACTGGGACTTTTAAACACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS TCA 72 bp | GTGTTGCACAGGTACCGAAGCAGTTCACCAATGTACTaGATGACCGTGACGTTGTATTTCCTGCAGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: VLHRYRSSSPMY*MTVTLYFLQSS Trigger: GGACGACTGCAGGAAATACAACGTCACGGTCATTCAGTACATTGGTGAACTGCTTCGGTACCTGTGCAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS TCA 72 bp | CGTCACGGACCGGCTCGTCCTTCTCCACGTCATACTTaGTCAGCTCATACCTTGCAACTTTTCTTTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: RHGPARPSPRHT*SAHTLQLFFVG Trigger: ACCTACAAAGAAAAGTTGCAAGGTATGAGCTGATCAAGTATGACGTGGAGAAGGACGAGCCGGTCCGTGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 72 bp | AGGCCTCGCGTAACTGGGCAGGTACTCCGCGATGTGTaGAAAGAGTTTCTTTCCATTGAACTCGTAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPRVTGQVLRDV*KEFLSIELVVF Trigger: GAAAACTACGAGTTCAATGGAAAGAAACTCTTTCAACACATCGCGGAGTACCTGCCCAGTTACGCGAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 90 bp | CAGGAACCGAGGCCTCGCGTAACTGGGCAGGTACTCCGCGATGTGTaGAAAGAGTTTCTTTCCATTGAACTCGTAGTTTTCTTTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: QEPRPRVTGQVLRDV*KEFLSIELVVFFDL Trigger: AAGATCAAAGAAAACTACGAGTTCAATGGAAAGAAACTCTTTCAACACATCGCGGAGTACCTGCCCAGTTACGCGAGGCCTCGGTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS GCA 72 bp | TGGAAGACCTGTGGTTCCCGAAGTATAAATGTATACTaGTGGCGTGGTAAAAGTGACTTCAGACCTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: WKTCGSRSINVY*WRGKSDFRPPR Trigger: TCGTGGAGGTCTGAAGTCACTTTTACCACGCCAGCAGTATACATTTATACTTCGGGAACCACAGGTCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CCA 72 bp | AAGACCTGTGGTTCCCGAAGTATAAATGTATACTGCTaGCGTGGTAAAAGTGACTTCAGACCTCCACGACTC | + |
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Preference number: 6 (lower is better) Translates to: KTCGSRSINVYC*RGKSDFRPPRL Trigger: GAGTCGTGGAGGTCTGAAGTCACTTTTACCACGCCAGCAGTATACATTTATACTTCGGGAACCACAGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CCA 72 bp | CTCTGTCTGGGTCTTTCCTCCAGCATAGCCAATAAATaGTGTGAGCTGTGTGATTTTGCAAACCAAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LCLGLSSSIANK*CELCDFANQES Trigger: GGACTCTTGGTTTGCAAAATCACACAGCTCACACCATTTATTGGCTATGCTGGAGGAAAGACCCAGACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 72 bp | TTACGTAAAAGACGGACACGGCATCCTTTTTCAGGGTaGGAAGAACCTCCTCCACAGCTTCTTGTAGATCTG | + |
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Preference number: 6 (lower is better) Translates to: LRKRRTRHPFSG*EEPPPQLLVDL Trigger: CAGATCTACAAGAAGCTGTGGAGGAGGTTCTTCCAACCCTGAAAAAGGATGCCGTGTCCGTCTTTTACGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061491.14 |
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| CDS CAA 72 bp | ACTGTGGGATTGAAGCCCTCTTCCATCAGGGTCACTTaGCGGTGTTTAAAAGTCCCAGTGATCTCAATGGTA | + |
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Preference number: 6 (lower is better) Translates to: TVGLKPSSIRVT*RCLKVPVISMV Trigger: TACCATTGAGATCACTGGGACTTTTAAACACCGCAAAGTGACCCTGATGGAAGAGGGCTTCAATCCCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 72 bp | TTACGTAAAAGACGGACACGGCATCCTTTTTCAGGGTaGGAAGAACCTCCTCCACAGCTTCTTGTAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LRKRRTRHPFSG*EEPPPQLLVDL Trigger: AAGATCTACAAGAAGCTGTGGAGGAGGTTCTTCCAACCCTGAAAAAGGATGCCGTGTCCGTCTTTTACGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141482.3 |
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| CDS CAA 90 bp | TCTTTGATGACTGTGGGATTGAAGCCCTCTTCCATCAGGGTCACTTaGCGGTGTTTAAAAGTCCCAGTGATCTCAATGGTATCTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: SLMTVGLKPSSIRVT*RCLKVPVISMVSCI Trigger: GATACAAGATACCATTGAGATCACTGGGACTTTTAAACACCGCAAAGTGACCCTGATGGAAGAGGGCTTCAATCCCACAGTCATCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS GCA 72 bp | CACCGATTTTCCTTGGATAGTTCACAAATCCAATGTTaGCTTCAGTGGATGCGTAGAACTCATACACGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HRFSLDSSQIQC*LQWMRRTHTRG Trigger: TCCACGTGTATGAGTTCTACGCATCCACTGAAGGCAACATTGGATTTGTGAACTATCCAAGGAAAATCGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 90 bp | TCTGCATCATCCATGAAATACAAGGTATCTTTGATGACTGTGGGATaGAAGCCCTCTTCCATCAGGGTCACTTTGCGGTGTTTAAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SASSMKYKVSLMTVG*KPSSIRVTLRCLKV Trigger: GACTTTTAAACACCGCAAAGTGACCCTGATGGAAGAGGGCTTCAATCCCACAGTCATCAAAGATACCTTGTATTTCATGGATGATGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 90 bp | GGCACAAATGTTTTCTCTGCATCATCCATGAAATACAAGGTATCTTaGATGACTGTGGGATTGAAGCCCTCTTCCATCAGGGTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: GTNVFSASSMKYKVS*MTVGLKPSSIRVTL Trigger: CAAAGTGACCCTGATGGAAGAGGGCTTCAATCCCACAGTCATCAAAGATACCTTGTATTTCATGGATGATGCAGAGAAAACATTTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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| CDS CAA 72 bp | GTTTTCTCTGCATCATCCATGAAATACAAGGTATCTTaGATGACTGTGGGATTGAAGCCCTCTTCCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: VFSASSMKYKVS*MTVGLKPSSIR Trigger: CCTGATGGAAGAGGGCTTCAATCCCACAGTCATCAAAGATACCTTGTATTTCATGGATGATGCAGAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061491.14 ENSMUST00000141482.3 |
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