Pregenerated sensors for SLC26A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040569Ensembl transcript IDs: ENSMUST00000042221.14, ENSMUST00000143105.2, ENSMUST00000149633.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCATATGAGACTACATGATTCCAGACTACAAATCTTTGGGTTCTaGAAGCGCCACAAGCACCACATAACTCCCTGTTTAAAATCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QHMRLHDSRLQIFGF*KRHKHHITPCLKSG Trigger: GCCAGATTTTAAACAGGGAGTTATGTGGTGCTTGTGGCGCTTTCAGAACCCAAAGATTTGTAGTCTGGAATCATGTAGTCTCATATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 90 bp | GTCTTGGCCAGTGGCTATGCAGTTGCCAAGTCATATCATTCTTACTaGGTGATACACTGTATATACACCAAAATGTGTGCAAAATGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VLASGYAVAKSYHSY*VIHCIYTKMCAKCQ Trigger: CTGGCATTTTGCACACATTTTGGTGTATATACAGTGTATCACTCAGTAAGAATGATATGACTTGGCAACTGCATAGCCACTGGCCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 90 bp | AAAGCAGAATATCTCGTGTGTGGCAATGCAGAAGTCAGAATTATCTaGTTGAACACACAAATGGTTTCCAGTATCCACAACTCAACAGAT | + |
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Preference number: 1 (lower is better) Translates to: KAEYLVCGNAEVRII*LNTQMVSSIHNSTD Trigger: ATCTGTTGAGTTGTGGATACTGGAAACCATTTGTGTGTTCAATCAGATAATTCTGACTTCTGCATTGCCACACACGAGATATTCTGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTACAAAATGCCAGGATCTaGCCTCTTTGGGGCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LPESICVECRTGISEVYVQNARI*PLWGSC Trigger: GCAGCTGCCCCAAAGAGGCCAGATCCTGGCATTTTG...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTACATCTGTCTGTCTGCTaGCTACCTGTCTTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPESICVECRTGISEVYVHLSVC*LPVFCL Trigger: CAGACAGAAGACAGGTAGGCAGCAGACAGACAGATG...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTAGAGTCATTGTGGTCTTaGCATAAACTACAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LPESICVECRTGISEVYVESLWS*HKLQSS Trigger: ACTGCTCTGTAGTTTATGCCAAGACCACAATGACTC...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR TCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACCCAATGGGTTGGGGATaGAAAATATCACCACCGTGT | + |
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Preference number: 2 (lower is better) Translates to: EIDTCMSKTYVQSLESQNPMGWG*KISPPC Trigger: ACACGGTGGTGATATTTTTCATCCCCAACCCATTGG...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR GCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGATCTCGTGTGTGGCAATaGAGAAGTCAGAATTATCTG | + |
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Preference number: 2 (lower is better) Translates to: NKLAARKHMCRMQNWHFGSRVWQ*RSQNYL Trigger: CAGATAATTCTGACTTCTGCATTGCCACACACGAGA...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTAAGGTCAGCAAGTCTTaGCCAGTGGCTATGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: YELIVECVNIVRVIMLMGKVSKS*PVAMQL Trigger: CAACTGCATAGCCACTGGCCAAGACTTGCTGACCTT...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTAGGTACCTTGTCTTACTaGTGTTTAAATAACTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPESICVECRTGISEVYVGTLSY*CLNNFG Trigger: CCCAAAGTTATTTAAACATCAGTAAGACAAGGTACC...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR TCA 90 bp | GGCATTTCGGAGGTGTATGTATGTTCAGCAACATACCAACATATTTCCACAATTAAACGGTGGATCATGTaGATGTTTGCCTTGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: GISEVYVCSATYQHISTIKRWIM*MFALHC Trigger: GCAATGCAAGGCAAACATTCACATGATCCACCGTTT...AATTGTGGAAATATGTTGGTATGTTGCTGAACATACATACACCTCCGAAATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR GCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTAAAAATGTGTGCAAAATaGCAGGATCTGGCCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: KMENIPWRSICHLSVCCLKMCAK*QDLASL Trigger: CAAAGAGGCCAGATCCTGGCATTTTGCACACATTTT...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR GCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTCTTGGCCAGTGGCTATaGAGTTGCCAAGTCATATCA | + |
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Preference number: 2 (lower is better) Translates to: LNCFISVDSTFHCMKWYLLGQWL*SCQVIS Trigger: TGATATGACTTGGCAACTGCATAGCCACTGGCCAAG...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGAGATTGAAGTGATTTaGGGAACCAAGACTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: NKLAARKHMCRMQNWHFGEIEVI*GTKTVL Trigger: AAGAACAGTCTTGGTTCCCCAAATCACTTCAATCTC...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR GCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACCAGTGGCTATGCAGTTaGCAAGTCATATCATTCTTA | + |
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Preference number: 2 (lower is better) Translates to: EIDTCMSKTYVQSLESQNQWLCS*QVISFL Trigger: TAAGAATGATATGACTTGGCAACTGCATAGCCACTG...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CCA 90 bp | GGCATTTCGGAGGTGTATGTATGTTCAGCAACATACCAACATATTTCCACAATTATGACCATGAAAGTTTaGAACACTATTTTAGGCATC | + |
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Preference number: 2 (lower is better) Translates to: GISEVYVCSATYQHISTIMTMKV*NTILGI Trigger: GATGCCTAAAATAGTGTTCCAAACTTTCATGGTCAT...AATTGTGGAAATATGTTGGTATGTTGCTGAACATACATACACCTCCGAAATGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CAA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGACAGGATCTGGCCTCTTaGGGGCAGCTGCTAAAGATG | + |
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Preference number: 3 (lower is better) Translates to: NKLAARKHMCRMQNWHFGQDLAS*GQLLKM Trigger: CATCTTTAGCAGCTGCCCCAAAGAGGCCAGATCCTG...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR GCA 72 bp | GCAATAAACTCGCTGCCAGAAAGCATATGTGTAGAATaGAGAACTGGCATTTCGGAGGTGTATGTATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: AINSLPESICVE*RTGISEVYVCS Trigger: TGAACATACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CAA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGATCTTCTGTCTGTCTGTaGTTCTATCTGCCATCTATC | + |
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Preference number: 3 (lower is better) Translates to: NKLAARKHMCRMQNWHFGSSVCL*FYLPSI Trigger: GATAGATGGCAGATAGAACAACAGACAGACAGAAGA...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 72 bp | TATCTCGTGTGTGGCAATGCAGAAGTCAGAATTATCTaGTTGAACACACAAATGGTTTCCAGTATCCACAAC | + |
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Preference number: 3 (lower is better) Translates to: YLVCGNAEVRII*LNTQMVSSIHN Trigger: GTTGTGGATACTGGAAACCATTTGTGTGTTCAATCAGATAATTCTGACTTCTGCATTGCCACACACGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 72 bp | CTACCAAAGACTGAGGTGTTAAAACGGTGGATCATGTaGATGTTTGCCTTGCATTGCCTAAGAAATATTCCA | + |
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Preference number: 3 (lower is better) Translates to: LPKTEVLKRWIM*MFALHCLRNIP Trigger: TGGAATATTTCTTAGGCAATGCAAGGCAAACATTCACATGATCCACCGTTTTAACACCTCAGTCTTTGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 72 bp | AGTGGCTATGCAGTTGCCAAGTCATATCATTCTTACTaGGTGATACACTGTATATACACCAAAATGTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SGYAVAKSYHSY*VIHCIYTKMCA Trigger: TGCACACATTTTGGTGTATATACAGTGTATCACTCAGTAAGAATGATATGACTTGGCAACTGCATAGCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR GCA 72 bp | CACCAGTTTTCTTCCACATATGAACTCATAGTTGAATaGGTGAACATTGTCAGAGTGATTATGTTGATGGGT | + |
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Preference number: 3 (lower is better) Translates to: HQFSSTYELIVE*VNIVRVIMLMG Trigger: ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATATGTGGAAGAAAACTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR-3UTR CAA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGTTTACAGTGTGTGGTTaGGTCTTCCTTGTCTTTGAC | + |
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Preference number: 3 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVFTVCG*VFLVFD Trigger: GTCAAAGACAAGGAAGACCAAACCACACACTGTAAA...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 72 bp | AGGCATCTTCATTTATTATTTCATCCTACCAAAGACTaGGGTGTTAAAACGGTGGATCATGTGAATGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: RHLHLLFHPTKD*GVKTVDHVNVC Trigger: GCAAACATTCACATGATCCACCGTTTTAACACCTCAGTCTTTGGTAGGATGAAATAATAAATGAAGATGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR TCA 72 bp | GCTATGCAGTTGCCAAGTCATATCATTCTTACTGAGTaGTACACTGTATATACACCAAAATGTGTGCAAAAT | + |
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Preference number: 3 (lower is better) Translates to: AMQLPSHIILTE*YTVYTPKCVQN Trigger: ATTTTGCACACATTTTGGTGTATATACAGTGTATCACTCAGTAAGAATGATATGACTTGGCAACTGCATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| 3UTR GCA 72 bp | AATAAGTCTGAAAGCAGAATATCTCGTGTGTGGCAATaGAGAAGTCAGAATTATCTGATTGAACACACAAAT | + |
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Preference number: 3 (lower is better) Translates to: NKSESRISRVWQ*RSQNYLIEHTN Trigger: ATTTGTGTGTTCAATCAGATAATTCTGACTTCTGCATTGCCACACACGAGATATTCTGCTTTCAGACTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTACAGCCGTCCTTCCCATaGCGGCAGCGCTTGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLQPSFP*RQRLGC Trigger: GCATCCCAAGCGCTGCCGCCATGGGAAGGACGGCTG...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTAAAGAACACTTCTCGCTaGAGCAGGGCTGGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPESICVECRTGISEVYVKNTSR*SRAGKP Trigger: AGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTTCTT...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | GGCATTTCGGAGGTGTATGTATGTTCAGCAACATACCAACATATTTCCACAATTCTTGGCAGATCCTTGTaGGAGAGCCAGCGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GISEVYVCSATYQHISTILGRSL*ESQRGH Trigger: GTGGCCTCGCTGGCTCTCGCACAAGGATCTGCCAAG...AATTGTGGAAATATGTTGGTATGTTGCTGAACATACATACACCTCCGAAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGGAAGCCTCTTCATTaGAGTTGCCGTTGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: NKLAARKHMCRMQNWHFGGKPLH*SCRWTG Trigger: CCCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCC...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAAGGCAAAGGTGCCTGTaGCAACATGGCGTCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: NKLAARKHMCRMQNWHFGRQRCL*QHGVPF Trigger: GAATGGGACGCCATGTTGCCACAGGCACCTTTGCCT...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTACCTTGTGCCACCTGTTaGACTGCCAACATTATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPESICVECRTGISEVYVPCATC*TANIIP Trigger: TGGGATAATGTTGGCAGTTCAACAGGTGGCACAAGG...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTAAGTTGCTCTGTGTGGTaGGGTTCCTGCTGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLSCSVW*GSCCSE Trigger: CTCAGAGCAGCAGGAACCTCACCACACAGAGCAACT...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACTCGCTGGAGCAGGGCTaGGAAGCCTCTTCATTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNSLEQG*EASSLQ Trigger: CTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGA...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTACAAATGAGGCGGCAATaGTCAAAACTAAGTCGACAG | + |
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Preference number: 4 (lower is better) Translates to: LPESICVECRTGISEVYVQMRRQ*SKLSRQ Trigger: CTGTCGACTTAGTTTTGATCATTGCCGCCTCATTTG...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGGTGGCACTGCCCAGCTaGAGCACAAACATGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVVALPS*STNMTS Trigger: GCTGGTCATGTTTGTGCTGCAGCTGGGCAGTGCCAC...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACCGGCAGCGCTTGGGATaGAGAAGAGAAATGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNRQRLG*RREMKG Trigger: TCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCG...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGAGAGAGGATGTTCATTaGGGGAGCACGGGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVREDVH*GSTGRR Trigger: CCTCCTCCCCGTGCTCCCCCAATGAACATCCTCTCT...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTAACGTTGCTGAGGCCATaGGCCAAAAATTCCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLTLLRP*AKNSWL Trigger: CAACCAGGAATTTTTGGCCCATGGCCTCAGCAACGT...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTATTCCCAAGAGATACTTaGCTTGTGATGTCACGACAT | + |
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Preference number: 4 (lower is better) Translates to: LPESICVECRTGISEVYVFPRDT*LVMSRH Trigger: ATGTCGTGACATCACAAGTCAAGTATCTCTTGGGAA...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | GGCATTTCGGAGGTGTATGTATGTTCAGCAACATACCAACATATTTCCACAATTAAGGGATCACGTTGCTaGGGCCATGGGCCAAAAATT | + |
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Preference number: 4 (lower is better) Translates to: GISEVYVCSATYQHISTIKGSRC*GHGPKI Trigger: AATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTT...AATTGTGGAAATATGTTGGTATGTTGCTGAACATACATACACCTCCGAAATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTCGTTGGACAGGGAACTaGGCAAGGTGTTCTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LNCFISVDSTFHCMKWYLRWTGN*ARCSVH Trigger: GTGAACAGAACACCTTGCTCAGTTCCCTGTCCAACG...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTGAAGGACAGCCCTTGTaGCACCTGTTGAACTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: YELIVECVNIVRVIMLMGEGQPL*HLLNCQ Trigger: TTGGCAGTTCAACAGGTGGCACAAGGGCTGTCCTTC...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | CTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTGTCTTACTGCAGGAATGTGGCACTaGCCAGCTGCAGCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: LYICRFHFSLYEVVPCLTAGMWH*PAAAQT Trigger: TGTTTGTGCTGCAGCTGGGCAGTGCCACATTCCTGC...AGTAAGACAAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR TCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTTTCCACAGCGTTGGCTaGTATCAAGGATGTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNCFISVDSTFHCMKWYLFHSVG*YQGCQG Trigger: GCCTTGACATCCTTGATATCAGCCAACGCTGTGGAA...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGACGAGAACAAGGACAATaGTGCTCAGCAAAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKLAARKHMCRMQNWHFGREQGQ*CSAKKR Trigger: TCTTTTCTTTGCTGAGCATCATTGTCCTTGTTCTCG...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGCTCCGAAAGCTTCAGTaGGCACTGCAGAGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVLRKLQ*ALQRGC Trigger: ACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGGAG...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTATCCTTCAGATTGTACTaGGGTGCCCATTCCAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLSFRLY*GAHSKI Trigger: TATCTTGGAATGGGCACCGCAGTACAATCTGAAGGA...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACTGCCACCTGTTGAACTaGCAACATTATCCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNCHLLN*QHYPRH Trigger: GTGTCTGGGATAATGTTGGCAGTTCAACAGGTGGCA...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACGTGCCTGTGGCAACATaGCGTCCCATTCCAAATATA | + |
|
Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNVPVAT*RPIPNI Trigger: TATATTTGGAATGGGACGCCATGTTGCCACAGGCAC...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTATGGTCCGGATATATATaGCATTTTGATTCCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPESICVECRTGISEVYVWSGYI*HFDSQE Trigger: CTCTTGGGAATCAAAATGCCATATATATCCGGACCA...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| 3UTR CAA 72 bp | GTTAAAACGGTGGATCATGTGAATGTTTGCCTTGCATaGCCTAAGAAATATTCCAGTCTGTCACTTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VKTVDHVNVCLA*PKKYSSLSLGQ Trigger: CTGTCCAAGTGACAGACTGGAATATTTCTTAGGCAATGCAAGGCAAACATTCACATGATCCACCGTTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGGAGATACTTGACTTGTaGTGTCACGACATGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVEILDL*CHDMGG Trigger: GCCACCCATGTCGTGACATCACAAGTCAAGTATCTC...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTCCAGCTGGACAGACTTaGTGTTCTCAAAGACATACG | + |
|
Preference number: 4 (lower is better) Translates to: YELIVECVNIVRVIMLMGPAGQT*CSQRHT Trigger: CGTATGTCTTTGAGAACATCAAGTCTGTCCAGCTGG...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGACTGGTTGTCATCAACTaGATATTTGAACTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKLAARKHMCRMQNWHFGLVVIN*IFELLG Trigger: GCCAAGAAGTTCAAATATTCAGTTGATGACAACCAG...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTGATGCAGAAGAGAAATaGAGGGATCACGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFISVDSTFHCMKWYLDAEEK*RDHVAE Trigger: CTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATC...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACATCCCGTTTGGAATGTaGCCAACTACTTCTAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNIPFGM*PTTSNP Trigger: CGGATTAGAAGTAGTTGGGCACATTCCAAACGGGAT...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACCACATAGCCTACAAGTaGAACTCCGAAAGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNHIAYK*NSESFS Trigger: ACTGAAGCTTTCGGAGTTGCACTTGTAGGCTATGTG...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTACAGCAGAGGTCCTATTaGATAGATGACAATAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLQQRSY*IDDNKD Trigger: GTCCTTATTGTCATCTATGCAATAGGACCTCTGCTG...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTATGTGGTCACTGGCCTTaGTCAAATTCTTATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPESICVECRTGISEVYVCGHWP*SNSYLI Trigger: AATCAAATAAGAATTTGAGCAAGGCCAGTGACCACA...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTAGCAGTGCTTCCAGCTaGACAGACTTGATGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YELIVECVNIVRVIMLMGSSASS*TDLMFS Trigger: TGAGAACATCAAGTCTGTCCAGCTGGAAGCACTGCT...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAACATCATCAAGTGGTTaGTTGCTGTCACTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLAARKHMCRMQNWHFGTSSSG*LLSLSF Trigger: AAAGGAAAGTGACAGCAACCAACCACTTGATGATGT...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTAGAGCTCAACAAGCGTaGAGACTCCTGTGTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YELIVECVNIVRVIMLMGRAQQA*RLLCSQ Trigger: TTGACTACACAGGAGTCTCCACGCTTGTTGAGCTCT...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGACATCAACTGAATATTTaGACTTCTTGGCAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLAARKHMCRMQNWHFGHQLNI*TSWQIL Trigger: AAGGATCTGCCAAGAAGTTCAAATATTCAGTTGATG...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACCACAACAATAATACTTaGAAGAACGCACATGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EIDTCMSKTYVQSLESQNHNNNT*KNAHGQ Trigger: CTGCCCATGTGCGTTCTTGCAAGTATTATTGTTGTG...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | GGCATTTCGGAGGTGTATGTATGTTCAGCAACATACCAACATATTTCCACAATTTGCGAGGTTTCATCATaGATTTCTGTCTTCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GISEVYVCSATYQHISTICEVSS*ISVFTF Trigger: GAAGGTGAAGACAGAAATGCATGATGAAACCTCGCA...AATTGTGGAAATATGTTGGTATGTTGCTGAACATACATACACCTCCGAAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTGCTGACATCATCAAGTaGTTGGTTGCTGTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YELIVECVNIVRVIMLMGADIIK*LVAVTF Trigger: GAAAGTGACAGCAACCAACCACTTGATGATGTCAGC...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTAGGATGCAGTACAGTTaGCTAAGAACACATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YELIVECVNIVRVIMLMGRMQYS*LRTHPH Trigger: GTGTGGATGTGTTCTTAGCCAACTGTACTGCATCCT...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGACAAACATGACCAGCTaGATCACTCCACCCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVTNMTS*ITPPKK Trigger: TTTCTTGGGTGGAGTGATTCAGCTGGTCATGTTTGT...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTCTTCACTGTGGTCACTaGCCTTGCTCAAATTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFISVDSTFHCMKWYLLHCGH*PCSNSY Trigger: ATAAGAATTTGAGCAAGGCCAGTGACCACAGTGAAG...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | CTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTGTCTTACTCATCAAGTGGTTGGTTaGTGTCACTTTCCTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYICRFHFSLYEVVPCLTHQVVG*CHFPLG Trigger: TCCTAAAGGAAAGTGACAGCAACCAACCACTTGATG...AGTAAGACAAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR GCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTATCCATAGTATGTCATTaGTTTTATCAAGGATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLSIVCH*FYQGCS Trigger: ACTGCATCCTTGATAAAAGCAATGACATACTATGGA...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR CCA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTAATGTGTTTTCCATGTTaGTACAATAGCAAGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KMENIPWRSICHLSVCCLMCFPC*YNSKQM Trigger: CATTTGCTTGCTATTGTACCAACATGGAAAACACAT...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| 3UTR CAA 72 bp | AGCAGTGGACTTTTACAGTGTGTGGTTTGGTCTTCCTaGTCTTTGACTGTAACAATGTTTGATACTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSGLLQCVVWSS*SLTVTMFDTEI Trigger: AATTTCAGTATCAAACATTGTTACAGTCAAAGACAAGGAAGACCAAACCACACACTGTAAAAGTCCACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS-3UTR GCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTCTTTCATGTCTGTTATaGTTAAAGTCTTTGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFISVDSTFHCMKWYLLSCLL*LKSLPL Trigger: CAAGGGCAAAGACTTTAAGCATAACAGACATGAAAG...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CCA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTATAAAAGAATCCCAGTaGTCCGGATATATATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFISVDSTFHCMKWYLIKESQ*SGYIWH Trigger: ATGCCATATATATCCGGACCACTGGGATTCTTTTAT...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| 3UTR CAA 72 bp | GGACTTTTACAGTGTGTGGTTTGGTCTTCCTTGTCTTaGACTGTAACAATGTTTGATACTGAAATTAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLQCVVWSSLS*TVTMFDTEINR Trigger: CCTATTAATTTCAGTATCAAACATTGTTACAGTCAAAGACAAGGAAGACCAAACCACACACTGTAAAAGTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| 3UTR CAA 72 bp | ATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTaGGAGTCTCAGAACTTAAGTCAAGAGACTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IDTCMSKTYVQS*ESQNLSQETFL Trigger: CAAGAAAGTCTCTTGACTTAAGTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| 3UTR CAA 72 bp | ATGTATGTTCAGCAACATACCAACATATTTCCACAATaGTTGAATGTCAGGCATTATTCATACGGGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: MYVQQHTNIFPQ*LNVRHYSYGVL Trigger: TAATACCCCGTATGAATAATGCCTGACATTCAACAATTGTGGAAATATGTTGGTATGTTGCTGAACATACAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 90 bp | CCTGCGTCTTTGCGCCGGTGCTGTACAAACCAGCCGTCCTTCCCATaGCGGCAGCGCTTGGGATGCAGAAGAGAAATGAAGGGATCACGT | + |
|
Preference number: 5 (lower is better) Translates to: PASLRRCCTNQPSFP*RQRLGCRREMKGSR Trigger: ACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCGCCATGGGAAGGACGGCTGGTTTGTACAGCACCGGCGCAAAGACGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 90 bp | CCAGCGAGGCCACATAGCCTACAAGTGCAACTCCGAAAGCTTCAGTaGGCACTGCAGAGAGGATGTTCATTGGGGGAGCACGGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PARPHSLQVQLRKLQ*ALQRGCSLGEHGEE Trigger: CTCCTCCCCGTGCTCCCCCAATGAACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGGAGTTGCACTTGTAGGCTATGTGGCCTCGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 90 bp | GAGGTTCCTGCTGCTCTGAGGGACCAGTCGTTCCACAGCGTTGGCTaGTATCAAGGATGTCAAGGCAAAGGTGCCTGTGGCAACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVPAALRDQSFHSVG*YQGCQGKGACGNMA Trigger: CGCCATGTTGCCACAGGCACCTTTGCCTTGACATCCTTGATATCAGCCAACGCTGTGGAACGACTGGTCCCTCAGAGCAGCAGGAACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS GCA 90 bp | GGCCACATAGCCTACAAGTGCAACTCCGAAAGCTTCAGTGAGCACTaGAGAGAGGATGTTCATTGGGGGAGCACGGGGAGGAGGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHIAYKCNSESFSEH*REDVHWGSTGRRNP Trigger: GGGATTCCTCCTCCCCGTGCTCCCCCAATGAACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGGAGTTGCACTTGTAGGCTATGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 90 bp | GCTCAAACTCGGATAAGCCCAACACACTTGAGTTGCTCTGTGTGGTaGGGTTCCTGCTGCTCTGAGGGACCAGTCGTTCCACAGCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQTRISPTHLSCSVW*GSCCSEGPVVPQRW Trigger: CCAACGCTGTGGAACGACTGGTCCCTCAGAGCAGCAGGAACCTCACCACACAGAGCAACTCAAGTGTGTTGGGCTTATCCGAGTTTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS TCA 90 bp | AGCCGTCCTTCCCATGGCGGCAGCGCTTGGGATGCAGAAGAGAAATaGAGGGATCACGTTGCTGAGGCCATGGGCCAAAAATTCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRPSHGGSAWDAEEK*RDHVAEAMGQKFLV Trigger: AACCAGGAATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCGCCATGGGAAGGACGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 90 bp | TGCAACTCCGAAAGCTTCAGTGAGCACTGCAGAGAGGATGTTCATTaGGGGAGCACGGGGAGGAGGAATCCCGTTTGGAATGTGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CNSESFSEHCREDVH*GSTGRRNPVWNVPN Trigger: GTTGGGCACATTCCAAACGGGATTCCTCCTCCCCGTGCTCCCCCAATGAACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGGAGTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 90 bp | CCACTGCAATTCAGGACCAAAGAACACTTCTCGCTGGAGCAGGGCTaGGAAGCCTCTTCATTGCAGTTGCCGTTGGACAGGGAACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLQFRTKEHFSLEQG*EASSLQLPLDRELS Trigger: GCTCAGTTCCCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTTCTTTGGTCCTGAATTGCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 90 bp | GGCAGATCCTTGTGCGAGAGCCAGCGAGGCCACATAGCCTACAAGTaGAACTCCGAAAGCTTCAGTGAGCACTGCAGAGAGGATGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRSLCESQRGHIAYK*NSESFSEHCREDVH Trigger: ATGAACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGGAGTTGCACTTGTAGGCTATGTGGCCTCGCTGGCTCTCGCACAAGGATCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 90 bp | AAAAGGTCAAGCCACTGCAATTCAGGACCAAAGAACACTTCTCGCTaGAGCAGGGCTGGGAAGCCTCTTCATTGCAGTTGCCGTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KRSSHCNSGPKNTSR*SRAGKPLHCSCRWT Trigger: TGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTTCTTTGGTCCTGAATTGCAGTGGCTTGACCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 90 bp | TCCGGATATATATGGCATTTTGATTCCCAAGAGATACTTGACTTGTaGTGTCACGACATGGGTGGCGGCCCCTGTGGTCATGGCGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGYIWHFDSQEILDL*CHDMGGGPCGHGAD Trigger: ATCAGCGCCATGACCACAGGGGCCGCCACCCATGTCGTGACATCACAAGTCAAGTATCTCTTGGGAATCAAAATGCCATATATATCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 90 bp | ATCACTCCACCCAAGAAAGAAACAGCTGCTGCAACCCCGATTCTCTaGAGCTCAAACTCGGATAAGCCCAACACACTTGAGTTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ITPPKKETAAATPIL*SSNSDKPNTLELLC Trigger: ACAGAGCAACTCAAGTGTGTTGGGCTTATCCGAGTTTGAGCTGCAGAGAATCGGGGTTGCAGCAGCTGTTTCTTTCTTGGGTGGAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS TCA 90 bp | CGGCAGCGCTTGGGATGCAGAAGAGAAATGAAGGGATCACGTTGCTaGGGCCATGGGCCAAAAATTCCTGGTTGTCATCAACTGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: RQRLGCRREMKGSRC*GHGPKIPGCHQLNI Trigger: AATATTCAGTTGATGACAACCAGGAATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 90 bp | AGGATGCAGTACAGTTGGCTAAGAACACATCCACACTCCTGCTCTTaGAATCAAGGTAGAGCTCAACAAGCGTGGAGACTCCTGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RMQYSWLRTHPHSCS*NQGRAQQAWRLLCS Trigger: ACTACACAGGAGTCTCCACGCTTGTTGAGCTCTACCTTGATTGCAAGAGCAGGAGTGTGGATGTGTTCTTAGCCAACTGTACTGCATCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 90 bp | TTGTGCCACCTGTTGAACTGCCAACATTATCCCAGACACAGTGTCTaGAAGCAGGTTTTCCTTCAGATTGTACTGCGGTGCCCATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LCHLLNCQHYPRHSV*KQVFLQIVLRCPFQ Trigger: TTGGAATGGGCACCGCAGTACAATCTGAAGGAAAACCTGCTTCCAGACACTGTGTCTGGGATAATGTTGGCAGTTCAACAGGTGGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042221.14 ENSMUST00000143105.2 ENSMUST00000149633.2 |
||
| CDS GCA 90 bp | TTATCAAGGATGCAGTACAGTTGGCTAAGAACACATCCACACTCCTaGTCTTGCAATCAAGGTAGAGCTCAACAAGCGTGGAGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRMQYSWLRTHPHS*SCNQGRAQQAWRLL Trigger: CAGGAGTCTCCACGCTTGTTGAGCTCTACCTTGATTGCAAGAGCAGGAGTGTGGATGTGTTCTTAGCCAACTGTACTGCATCCTTGATAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTCAGAGAGGATGTTCATaGGGGGAGCACGGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YELIVECVNIVRVIMLMGQRGCS*GEHGEE Trigger: CTCCTCCCCGTGCTCCCCCAATGAACATCCTCTCTG...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTCTTCTTGGCAGATCCTaGTGCGAGAGCCAGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YELIVECVNIVRVIMLMGLLGRS*CESQRG Trigger: GCCTCGCTGGCTCTCGCACAAGGATCTGCCAAGAAG...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | AATAAACTCGCTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAAGGTTTTCCTTCAGATaGTACTGCGGTGCCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKLAARKHMCRMQNWHFGRFSFR*YCGAHS Trigger: GGAATGGGCACCGCAGTACAATCTGAAGGAAAACCT...TCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAGCGAGTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTCCCTTGTGCCACCTGTaGAACTGCCAACATTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LNCFISVDSTFHCMKWYLPLCHL*NCQHYP Trigger: GGGATAATGTTGGCAGTTCAACAGGTGGCACAAGGG...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTCCCAACACACTTGAGTaGCTCTGTGTGGTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNCFISVDSTFHCMKWYLPNTLE*LCVVRF Trigger: GAACCTCACCACACAGAGCAACTCAAGTGTGTTGGG...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTAATGAAGGGATCACGTaGCTGAGGCCATGGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNCFISVDSTFHCMKWYLNEGIT*LRPWAK Trigger: TTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATT...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTCAACTGCTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTTCATTGCAGTTGCCGTaGGACAGGGAACTGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNCFISVDSTFHCMKWYLSLQLP*DRELSK Trigger: CTTGCTCAGTTCCCTGTCCAACGGCAACTGCAATGA...AAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAGCAGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTACTGTGGTCACTGGCCTaGCTCAAATTCTTATTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPESICVECRTGISEVYVLWSLA*LKFLFD Trigger: ATCAAATAAGAATTTGAGCAAGGCCAGTGACCACAG...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | AAAATGGAAAACATACCATGGAGATCTATCTGTCATCTGTCTGTCTGCTGCCTATCATCAAGTGGTTGGTaGCTGTCACTTTCCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMENIPWRSICHLSVCCLSSSGW*LSLSFR Trigger: CCTAAAGGAAAGTGACAGCAACCAACCACTTGATGA...TAGGCAGCAGACAGACAGATGACAGATAGATCTCCATGGTATGTTTTCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGAAAGCATATGTGTAGAATGCAGAACTGGCATTTCGGAGGTGTATGTATCATCAACTGAATATTaGAACTTCTTGGCAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPESICVECRTGISEVYVSSTEY*NFLADP Trigger: AGGATCTGCCAAGAAGTTCAAATATTCAGTTGATGA...TACATACACCTCCGAAATGCCAGTTCTGCATTCTACACATATGCTTTCTGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCGGAGGTGTATGTATGTTCAGCAACATACCAACATATTTCCACAATTGAATATTTGAACTTCTaGGCAGATCCTTGTGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GISEVYVCSATYQHISTIEYLNF*ADPCAR Trigger: TCTCGCACAAGGATCTGCCAAGAAGTTCAAATATTC...AATTGTGGAAATATGTTGGTATGTTGCTGAACATACATACACCTCCGAAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTGACATCATCAAGTGGTaGGTTGCTGTCACTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YELIVECVNIVRVIMLMGDIIKW*VAVTFL Trigger: AAGGAAAGTGACAGCAACCAACCACTTGATGATGTC...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | CTTTATATCTGTAGATTCCACTTTTCACTGTATGAAGTGGTACCTTGTCTTACTTCCAGCTGGACAGACTaGATGTTCTCAAAGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: LYICRFHFSLYEVVPCLTSSWTD*MFSKTY Trigger: GTATGTCTTTGAGAACATCAAGTCTGTCCAGCTGGA...AGTAAGACAAGGTACCACTTCATACAGTGAAAAGTGGAATCTACAGATATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACCTCCATAGTATGTCATaGCTTTTATCAAGGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EIDTCMSKTYVQSLESQNLHSMS*LLSRMQ Trigger: CTGCATCCTTGATAAAAGCAATGACATACTATGGAG...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | TGTTTTCTCTGCTTCTGCTTTGAGATAGACACTTGTATGTCTAAAACTTATGTGATTCCCAAGAGATACTaGACTTGTGATGTCACGACA | + |
|
Preference number: 5 (lower is better) Translates to: CFLCFCFEIDTCMSKTYVIPKRY*TCDVTT Trigger: TGTCGTGACATCACAAGTCAAGTATCTCTTGGGAAT...CACATAAGTTTTAGACATACAAGTGTCTATCTCAAAGCAGAAGCAGAGAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | GAGATAGACACTTGTATGTCTAAAACTTATGTGCAGTCTTTGGAGTCTCAGAACGCCAAAAATTCCTGGTaGTCATCAACTGAATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: EIDTCMSKTYVQSLESQNAKNSW*SSTEYL Trigger: CAAATATTCAGTTGATGACAACCAGGAATTTTTGGC...GTTCTGAGACTCCAAAGACTGCACATAAGTTTTAGACATACAAGTGTCTATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS-3UTR CAA 90 bp | TATGAACTCATAGTTGAATGCGTGAACATTGTCAGAGTGATTATGTTGATGGGTAACAACAATCCCACATaGGCAGCAAAGCATATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: YELIVECVNIVRVIMLMGNNNPT*AAKHIV Trigger: TACAATATGCTTTGCTGCCAATGTGGGATTGTTGTT...ACCCATCAACATAATCACTCTGACAATGTTCACGCATTCAACTATGAGTTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 90 bp | CTTGATGTTCTCAAAGACATACGCATAAATATAAAAGAATCCCAGTaGTCCGGATATATATGGCATTTTGATTCCCAAGAGATACTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDVLKDIRINIKESQ*SGYIWHFDSQEILD Trigger: GTCAAGTATCTCTTGGGAATCAAAATGCCATATATATCCGGACCACTGGGATTCTTTTATATTTATGCGTATGTCTTTGAGAACATCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 72 bp | AAGATATTAGACAAGCCACCTGCGTCTTTGCGCCGGTaGTGTACAAACCAGCCGTCCTTCCCATGGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KILDKPPASLRR*CTNQPSFPWRQ Trigger: CTGCCGCCATGGGAAGGACGGCTGGTTTGTACAGCACCGGCGCAAAGACGCAGGTGGCTTGTCTAATATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 72 bp | CGGATAAGCCCAACACACTTGAGTTGCTCTGTGTGGTaGGGTTCCTGCTGCTCTGAGGGACCAGTCGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RISPTHLSCSVW*GSCCSEGPVVP Trigger: TGGAACGACTGGTCCCTCAGAGCAGCAGGAACCTCACCACACAGAGCAACTCAAGTGTGTTGGGCTTATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS TCA 72 bp | TCCCATGGCGGCAGCGCTTGGGATGCAGAAGAGAAATaGAGGGATCACGTTGCTGAGGCCATGGGCCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SHGGSAWDAEEK*RDHVAEAMGQK Trigger: TTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCGCCATGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 72 bp | TCCTGCTGCTCTGAGGGACCAGTCGTTCCACAGCGTTaGCTGATATCAAGGATGTCAAGGCAAAGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCCSEGPVVPQR*LISRMSRQRCL Trigger: CAGGCACCTTTGCCTTGACATCCTTGATATCAGCCAACGCTGTGGAACGACTGGTCCCTCAGAGCAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS CCA 72 bp | TTCAGGACCAAAGAACACTTCTCGCTGGAGCAGGGCTaGGAAGCCTCTTCATTGCAGTTGCCGTTGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRTKEHFSLEQG*EASSLQLPLDR Trigger: CCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTTCTTTGGTCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CAA 72 bp | TGTACAAACCAGCCGTCCTTCCCATGGCGGCAGCGCTaGGGATGCAGAAGAGAAATGAAGGGATCACGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CTNQPSFPWRQR*GCRREMKGSRC Trigger: GCAACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCGCCATGGGAAGGACGGCTGGTTTGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CAA 72 bp | GAGCAGGGCTGGGAAGCCTCTTCATTGCAGTTGCCGTaGGACAGGGAACTGAGCAAGGTGTTCTGTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: EQGWEASSLQLP*DRELSKVFCSH Trigger: GTGTGAACAGAACACCTTGCTCAGTTCCCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CAA 90 bp | TTCTCGCTGGAGCAGGGCTGGGAAGCCTCTTCATTGCAGTTGCCGTaGGACAGGGAACTGAGCAAGGTGTTCTGTTCACACTTGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: FSLEQGWEASSLQLP*DRELSKVFCSHLLT Trigger: TGTCAGCAAGTGTGAACAGAACACCTTGCTCAGTTCCCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CAA 90 bp | GAACACTTCTCGCTGGAGCAGGGCTGGGAAGCCTCTTCATTGCAGTaGCCGTTGGACAGGGAACTGAGCAAGGTGTTCTGTTCACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: EHFSLEQGWEASSLQ*PLDRELSKVFCSHL Trigger: CAAGTGTGAACAGAACACCTTGCTCAGTTCCCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CCA 72 bp | ATTCCCAAGAGATACTTGACTTGTGATGTCACGACATaGGTGGCGGCCCCTGTGGTCATGGCGCTGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: IPKRYLTCDVTT*VAAPVVMALIT Trigger: TGTGATCAGCGCCATGACCACAGGGGCCGCCACCCATGTCGTGACATCACAAGTCAAGTATCTCTTGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS CCA 72 bp | AGCCACTGCAATTCAGGACCAAAGAACACTTCTCGCTaGAGCAGGGCTGGGAAGCCTCTTCATTGCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SHCNSGPKNTSR*SRAGKPLHCSC Trigger: GCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTTCTTTGGTCCTGAATTGCAGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 72 bp | CCACATAGCCTACAAGTGCAACTCCGAAAGCTTCAGTaGGCACTGCAGAGAGGATGTTCATTGGGGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PHSLQVQLRKLQ*ALQRGCSLGEH Trigger: GTGCTCCCCCAATGAACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGGAGTTGCACTTGTAGGCTATGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 72 bp | CATAGCGAAGGACAGCCCTTGTGCCACCTGTTGAACTaGCAACATTATCCCAGACACAGTGTCTGGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSEGQPLCHLLN*QHYPRHSVWKQ Trigger: CTGCTTCCAGACACTGTGTCTGGGATAATGTTGGCAGTTCAACAGGTGGCACAAGGGCTGTCCTTCGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042221.14 ENSMUST00000143105.2 ENSMUST00000149633.2 |
||
| CDS CAA 90 bp | CCCAGTGGTCCGGATATATATGGCATTTTGATTCCCAAGAGATACTaGACTTGTGATGTCACGACATGGGTGGCGGCCCCTGTGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PSGPDIYGILIPKRY*TCDVTTWVAAPVVM Trigger: CATGACCACAGGGGCCGCCACCCATGTCGTGACATCACAAGTCAAGTATCTCTTGGGAATCAAAATGCCATATATATCCGGACCACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CAA 90 bp | ATGGCGGCAGCGCTTGGGATGCAGAAGAGAAATGAAGGGATCACGTaGCTGAGGCCATGGGCCAAAAATTCCTGGTTGTCATCAACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: MAAALGMQKRNEGIT*LRPWAKNSWLSSTE Trigger: TTCAGTTGATGACAACCAGGAATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGCTGCCGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 72 bp | GAAAGCATAGCGAAGGACAGCCCTTGTGCCACCTGTTaGACTGCCAACATTATCCCAGACACAGTGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ESIAKDSPCATC*TANIIPDTVSG Trigger: TCCAGACACTGTGTCTGGGATAATGTTGGCAGTTCAACAGGTGGCACAAGGGCTGTCCTTCGCTATGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042221.14 ENSMUST00000143105.2 ENSMUST00000149633.2 |
||
| CDS GCA 72 bp | CCCAAGAAAGAAACAGCTGCTGCAACCCCGATTCTCTaGAGCTCAAACTCGGATAAGCCCAACACACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PKKETAAATPIL*SSNSDKPNTLE Trigger: CTCAAGTGTGTTGGGCTTATCCGAGTTTGAGCTGCAGAGAATCGGGGTTGCAGCAGCTGTTTCTTTCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042221.14 ENSMUST00000149633.2 |
||
| CDS CAA 72 bp | TGTTCATTGGGGGAGCACGGGGAGGAGGAATCCCGTTaGGAATGTGCCCAACTACTTCTAATCCGTATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSLGEHGEEESR*ECAQLLLIRMC Trigger: ACACATACGGATTAGAAGTAGTTGGGCACATTCCAAACGGGATTCCTCCTCCCCGTGCTCCCCCAATGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS CAA 72 bp | GCGCTTGGGATGCAGAAGAGAAATGAAGGGATCACGTaGCTGAGGCCATGGGCCAAAAATTCCTGGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALGMQKRNEGIT*LRPWAKNSWLS Trigger: TGACAACCAGGAATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATCCCAAGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 72 bp | ACAGTGTCTGGAAGCAGGTTTTCCTTCAGATTGTACTaGGGTGCCCATTCCAAGATAGGTAGGCGCCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TVSGSRFSFRLY*GAHSKIGRRLL Trigger: TAAGAGGCGCCTACCTATCTTGGAATGGGCACCGCAGTACAATCTGAAGGAAAACCTGCTTCCAGACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042221.14 ENSMUST00000143105.2 ENSMUST00000149633.2 |
||
| CDS GCA 72 bp | ATAAGGACGAAAATGCAAGATATTAGACAAGCCACCTaGGTCTTTGCGCCGGTGCTGTACAAACCAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: IRTKMQDIRQAT*VFAPVLYKPAV Trigger: GACGGCTGGTTTGTACAGCACCGGCGCAAAGACGCAGGTGGCTTGTCTAATATCTTGCATTTTCGTCCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS TCA 72 bp | ATATGGCATTTTGATTCCCAAGAGATACTTGACTTGTaGTGTCACGACATGGGTGGCGGCCCCTGTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IWHFDSQEILDL*CHDMGGGPCGH Trigger: ATGACCACAGGGGCCGCCACCCATGTCGTGACATCACAAGTCAAGTATCTCTTGGGAATCAAAATGCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 72 bp | TACAGTTGGCTAAGAACACATCCACACTCCTGCTCTTaGAATCAAGGTAGAGCTCAACAAGCGTGGAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: YSWLRTHPHSCS*NQGRAQQAWRL Trigger: GAGTCTCCACGCTTGTTGAGCTCTACCTTGATTGCAAGAGCAGGAGTGTGGATGTGTTCTTAGCCAACTGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
||
| CDS GCA 72 bp | ATGCAGTACAGTTGGCTAAGAACACATCCACACTCCTaGTCTTGCAATCAAGGTAGAGCTCAACAAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MQYSWLRTHPHS*SCNQGRAQQAW Trigger: CCACGCTTGTTGAGCTCTACCTTGATTGCAAGAGCAGGAGTGTGGATGTGTTCTTAGCCAACTGTACTGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS CAA 72 bp | CCGGATATATATGGCATTTTGATTCCCAAGAGATACTaGACTTGTGATGTCACGACATGGGTGGCGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PDIYGILIPKRY*TCDVTTWVAAP Trigger: AGGGGCCGCCACCCATGTCGTGACATCACAAGTCAAGTATCTCTTGGGAATCAAAATGCCATATATATCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS TCA 72 bp | GGGCCAAAAATTCCTGGTTGTCATCAACTGAATATTTaGACTTCTTGGCAGATCCTTGTGCGAGAGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GPKIPGCHQLNI*TSWQILVREPA Trigger: CGCTGGCTCTCGCACAAGGATCTGCCAAGAAGTTCAAATATTCAGTTGATGACAACCAGGAATTTTTGGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS CAA 72 bp | TTGGACAGGGAACTGAGCAAGGTGTTCTGTTCACACTaGCTGACATCATCAAGTGGTTGGTTGCTGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: LDRELSKVFCSH*LTSSSGWLLSL Trigger: AAGTGACAGCAACCAACCACTTGATGATGTCAGCAAGTGTGAACAGAACACCTTGCTCAGTTCCCTGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS TCA 72 bp | GAGGCCATGGGCCAAAAATTCCTGGTTGTCATCAACTaGATATTTGAACTTCTTGGCAGATCCTTGTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: EAMGQKFLVVIN*IFELLGRSLCE Trigger: CTCGCACAAGGATCTGCCAAGAAGTTCAAATATTCAGTTGATGACAACCAGGAATTTTTGGCCCATGGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS GCA 72 bp | AACGCACATGGGCAGCCAGTACAGCAGAGGTCCTATTaGATAGATGACAATAAGGACGAAAATGCAAGATAT | + |
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Preference number: 6 (lower is better) Translates to: NAHGQPVQQRSY*IDDNKDENARY Trigger: ATATCTTGCATTTTCGTCCTTATTGTCATCTATGCAATAGGACCTCTGCTGTACTGGCTGCCCATGTGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS CCA 72 bp | CAGAAGAGAAATGAAGGGATCACGTTGCTGAGGCCATaGGCCAAAAATTCCTGGTTGTCATCAACTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: QKRNEGITLLRP*AKNSWLSSTEY Trigger: ATATTCAGTTGATGACAACCAGGAATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS CCA 72 bp | AGTATGTCATTGCTTTTATCAAGGATGCAGTACAGTTaGCTAAGAACACATCCACACTCCTGCTCTTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SMSLLLSRMQYS*LRTHPHSCSCN Trigger: ATTGCAAGAGCAGGAGTGTGGATGTGTTCTTAGCCAACTGTACTGCATCCTTGATAAAAGCAATGACATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS CAA 72 bp | TTGGTTTTTCGGTGTCTAGGTCTCCATAGTATGTCATaGCTTTTATCAAGGATGCAGTACAGTTGGCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LVFRCLGLHSMS*LLSRMQYSWLR Trigger: TCTTAGCCAACTGTACTGCATCCTTGATAAAAGCAATGACATACTATGGAGACCTAGACACCGAAAAACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS TCA 72 bp | GCAAAGAAAAGAGCAGTGCTTCCAGCTGGACAGACTTaGTGTTCTCAAAGACATACGCATAAATATAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: AKKRAVLPAGQT*CSQRHTHKYKR Trigger: TCTTTTATATTTATGCGTATGTCTTTGAGAACATCAAGTCTGTCCAGCTGGAAGCACTGCTCTTTTCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS TCA 72 bp | TTTCTTTGCATTCAGGAAAACAAGTGGGTTGTTTATTaGGATGATTTTTATCTGTTGCGAGGTTTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: FLCIQENKWVVY*DDFYLLRGFIM Trigger: CATGATGAAACCTCGCAACAGATAAAAATCATCTCAATAAACAACCCACTTGTTTTCCTGAATGCAAAGAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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| CDS CAA 72 bp | GCACTAAATTTCTTTGCATTCAGGAAAACAAGTGGGTaGTTTATTGAGATGATTTTTATCTGTTGCGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: ALNFFAFRKTSG*FIEMIFICCEV Trigger: AACCTCGCAACAGATAAAAATCATCTCAATAAACAACCCACTTGTTTTCCTGAATGCAAAGAAATTTAGTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042221.14 |
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