RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC26A6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023259

Ensembl transcript IDs: ENSMUST00000188557.8, ENSMUST00000192559.7, ENSMUST00000193874.3, ENSMUST00000239562.1

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGAGAGGGTGCTCAGGTCCAGGATGAGGCTATGGAAGCCTGGCTaGGGCAGGCCCAGGGACTTCAGTGAGGTCATGGTTGGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: KERVLRSRMRLWKPG*GRPRDFSEVMVGAL
Trigger: CAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGCCAGGCTTCCATAGCCTCATCCTGGACCTGAGCACCCTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 90 bp GCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTGACTGCAATACCCTaGCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGCATCCA +
Preference number: 1 (lower is better)
Translates to: APFQHPAKASLTAIP*PRPVALNLGVPGHP
Trigger: TGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR TCA 90 bp CAGAGAGTCGCTGTAGAGCTCAGCATTGGCGAAGTACAGCGTGGCTaGGGAACGGAAGACTTTCACACCCGGGACCTCCTTGGCCCCAGA +
Preference number: 1 (lower is better)
Translates to: QRVAVELSIGEVQRG*GTEDFHTRDLLGPR
Trigger: TCTGGGGCCAAGGAGGTCCCGGGTGTGAAAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCAATGCTGAGCTCTACAGCGACTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 90 bp GGCGAAGCCCACCACAGCAATGGCAAAGGCATTTCCCACAAGCGTTaGAAACAGCTCTGTCTTGGGTGCCACCGGGGGTATGAGCCCTGT +
Preference number: 1 (lower is better)
Translates to: GEAHHSNGKGISHKR*KQLCLGCHRGYEPC
Trigger: ACAGGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCCATTGCTGTGGTGGGCTTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR TCA 90 bp GATGAGGCTATGGAAGCCTGGCTGAGGCAGGCCCAGGGACTTCAGTaGGGTCATGGTTGGGGCCTTGGCATCTTCTTGATTGCTGGAGAC +
Preference number: 1 (lower is better)
Translates to: DEAMEAWLRQAQGLQ*GHGWGLGIFLIAGD
Trigger: GTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGCCAGGCTTCCATAGCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 90 bp GGCAAAGGCATTTCCCACAAGCGTTGCAAACAGCTCTGTCTTGGGTaGCACCGGGGGTATGAGCCCTGTGGTGATGTTGCCCACCACATC +
Preference number: 1 (lower is better)
Translates to: GKGISHKRCKQLCLG*HRGYEPCGDVAHHI
Trigger: GATGTGGTGGGCAACATCACCACAGGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp TCCTGTACCAAGCTCCGAGACATGGAGCAGCTCACGGGGAAGCACTaGAAGAAGCCTCCAATGAGGTTACTGAGGCCAAGGGCTACCAGC +
Preference number: 1 (lower is better)
Translates to: SCTKLRDMEQLTGKH*KKPPMRLLRPRATS
Trigger: GCTGGTAGCCCTTGGCCTCAGTAACCTCATTGGAGGCTTCTTCCAGTGCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTTGGTACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp GGGGCAGCTGCATTCGGACGACCACGAGCAGCAAGGAGAAGACTATaGAAACTGCCAGGCCAATGTCCAGGTTCAGCAGGATTGTGGCCA +
Preference number: 1 (lower is better)
Translates to: GAAAFGRPRAARRRL*KLPGQCPGSAGLWP
Trigger: TGGCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTCTCCTTGCTGCTCGTGGTCGTCCGAATGCAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp CTTTCAGAGAGTCGCTGTAGAGCTCAGCATTGGCGAAGTACAGCGTaGCTGAGGAACGGAAGACTTTCACACCCGGGACCTCCTTGGCCC +
Preference number: 1 (lower is better)
Translates to: LSESRCRAQHWRSTA*LRNGRLSHPGPPWP
Trigger: GGGCCAAGGAGGTCCCGGGTGTGAAAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCAATGCTGAGCTCTACAGCGACTCTCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp GCTGAGGCAGGCCCAGGGACTTCAGTGAGGTCATGGTTGGGGCCTTaGCATCTTCTTGATTGCTGGAGACTACATCCTGAAGCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: AEAGPGTSVRSWLGP*HLLDCWRLHPEAPP
Trigger: GGGAGGAGCTTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp GGTAGCCATGCCTCAGGGCAAAGATCTTCCCCAGTGAGATGGCAATaGCGAAGCCCACCACAGCAATGGCAAAGGCATTTCCCACAAGCG +
Preference number: 1 (lower is better)
Translates to: GSHASGQRSSPVRWQ*RSPPQQWQRHFPQA
Trigger: CGCTTGTGGGAAATGCCTTTGCCATTGCTGTGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTTGCCCTGAGGCATGGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp CCACACGGTAGCCATGCCTCAGGGCAAAGATCTTCCCCAGTGAGATaGCAATGGCGAAGCCCACCACAGCAATGGCAAAGGCATTTCCCA +
Preference number: 1 (lower is better)
Translates to: PHGSHASGQRSSPVR*QWRSPPQQWQRHFP
Trigger: TGGGAAATGCCTTTGCCATTGCTGTGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTTGCCCTGAGGCATGGCTACCGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 90 bp ACGGAAGACTTTCACACCCGGGACCTCCTTGGCCCCAGAGTATTCTaGCACGTCTCTATAAATATCCGTATCTGGCACCTGCCCCAGGAC +
Preference number: 1 (lower is better)
Translates to: TEDFHTRDLLGPRVF*HVSINIRIWHLPQD
Trigger: GTCCTGGGGCAGGTGCCAGATACGGATATTTATAGAGACGTGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGTGAAAGTCTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 90 bp GGGACTTCAGTGAGGTCATGGTTGGGGCCTTGGCATCTTCTTGATTaGTGGAGACTACATCCTGAAGCTCCTCCCCTTGGTGCACCTTGG +
Preference number: 1 (lower is better)
Translates to: GTSVRSWLGPWHLLD*WRLHPEAPPLGAPW
Trigger: CCAAGGTGCACCAAGGGGAGGAGCTTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp TATGGAAGCCTGGCTGAGGCAGGCCCAGGGACTTCAGTGAGGTCATaGTTGGGGCCTTGGCATCTTCTTGATTGCTGGAGACTACATCCT +
Preference number: 1 (lower is better)
Translates to: YGSLAEAGPGTSVRS*LGPWHLLDCWRLHP
Trigger: AGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGCCAGGCTTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp CAGAGTTTGGTGGCCAAAACAGGGCTCTTAGGGACAGACTTCCGGTaGCTGAGGGCAAAGGTCACAGCGTCATGGACAGAGGCAAAGACA +
Preference number: 1 (lower is better)
Translates to: QSLVAKTGLLGTDFR*LRAKVTASWTEAKT
Trigger: TGTCTTTGCCTCTGTCCATGACGCTGTGACCTTTGCCCTCAGCCACCGGAAGTCTGTCCCTAAGAGCCCTGTTTTGGCCACCAAACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 90 bp CTGCATTCGGACGACCACGAGCAGCAAGGAGAAGACTATGGAAACTaGCAGGCCAATGTCCAGGTTCAGCAGGATTGTGGCCACAAAGGT +
Preference number: 1 (lower is better)
Translates to: LHSDDHEQQGEDYGN*QANVQVQQDCGHKG
Trigger: ACCTTTGTGGCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTCTCCTTGCTGCTCGTGGTCGTCCGAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp CTACACCGCACTTCTCTTTCAGAGAGTCGCTGTAGAGCTCAGCATTaGCGAAGTACAGCGTGGCTGAGGAACGGAAGACTTTCACACCCG +
Preference number: 1 (lower is better)
Translates to: LHRTSLSESRCRAQH*RSTAWLRNGRLSHP
Trigger: CGGGTGTGAAAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCAATGCTGAGCTCTACAGCGACTCTCTGAAAGAGAAGTGCGGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp ACTTCAGTGAGGTCATGGTTGGGGCCTTGGCATCTTCTTGATTGCTaGAGACTACATCCTGAAGCTCCTCCCCTTGGTGCACCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: TSVRSWLGPWHLLDC*RLHPEAPPLGAPWP
Trigger: AGGCCAAGGTGCACCAAGGGGAGGAGCTTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp ACAGCGTGGCTGAGGAACGGAAGACTTTCACACCCGGGACCTCCTTaGCCCCAGAGTATTCTGCCACGTCTCTATAAATATCCGTATCTG +
Preference number: 1 (lower is better)
Translates to: TAWLRNGRLSHPGPP*PQSILPRLYKYPYL
Trigger: CAGATACGGATATTTATAGAGACGTGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGTGAAAGTCTTCCGTTCCTCAGCCACGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 90 bp GAAGTGTCCAGCTTCAAGCTGGGCGACCACAGGACTGTAACAGGCTaGGATGTACACTTCCACTTCAATCTCCCGGAAGTCACGGAAAAT +
Preference number: 1 (lower is better)
Translates to: EVSSFKLGDHRTVTG*DVHFHFNLPEVTEN
Trigger: ATTTTCCGTGACTTCCGGGAGATTGAAGTGGAAGTGTACATCGCAGCCTGTTACAGTCCTGTGGTCGCCCAGCTTGAAGCTGGACACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp AGACTATGGAAACTGCCAGGCCAATGTCCAGGTTCAGCAGGATTGTaGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTG +
Preference number: 1 (lower is better)
Translates to: RLWKLPGQCPGSAGL*PQRSPARLAGPLCL
Trigger: CAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCATAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 90 bp TTAGGGACAGACTTCCGGTGGCTGAGGGCAAAGGTCACAGCGTCATaGACAGAGGCAAAGACATGCTGCTTAGTGATAGATTCATCAAAG +
Preference number: 1 (lower is better)
Translates to: LGTDFRWLRAKVTAS*TEAKTCCLVIDSSK
Trigger: CTTTGATGAATCTATCACTAAGCAGCATGTCTTTGCCTCTGTCCATGACGCTGTGACCTTTGCCCTCAGCCACCGGAAGTCTGTCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 90 bp TGGCTGAGGGCAAAGGTCACAGCGTCATGGACAGAGGCAAAGACATaGTGCTTAGTGATAGATTCATCAAAGAAGTGTCCAGCTTCAAGC +
Preference number: 1 (lower is better)
Translates to: WLRAKVTASWTEAKT*CLVIDSSKKCPASS
Trigger: GCTTGAAGCTGGACACTTCTTTGATGAATCTATCACTAAGCAGCATGTCTTTGCCTCTGTCCATGACGCTGTGACCTTTGCCCTCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 90 bp AGGTCCACTCTGTTTGCCTTCCAAAGAGAGCAGATGTCTGAGAACTaGTTCATCATGCCCTTTAGGTTCACAATAATGACAGCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: RSTLFAFQREQMSEN*FIMPFRFTIMTAAR
Trigger: CCTGGCTGCTGTCATTATTGTGAACCTAAAGGGCATGATGAAGCAGTTCTCAGACATCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR TCA 90 bp ATTGCTTTTGACGTCTTCCAAGTTGGTGTTGACGTTGACGGAAACTaGGGAGATCTTGGAAGAAGCATCCTGTTTCTGGGACTTCTTGGC +
Preference number: 1 (lower is better)
Translates to: IAFDVFQVGVDVDGN*GDLGRSILFLGLLG
Trigger: GCCAAGAAGTCCCAGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp ACGTTGACGGAAACTGAGGAGATCTTGGAAGAAGCATCCTGTTTCTaGGACTTCTTGGCTTTCTTCATTCGCTTTAACTTCATCTCCTGC +
Preference number: 1 (lower is better)
Translates to: TLTETEEILEEASCF*DFLAFFIRFNFISC
Trigger: GCAGGAGATGAAGTTAAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 90 bp ATTCGCTTTAACTTCATCTCCTGCTTTTTGATTCGTTTCTTCTTCTaGGTGATGAGGCGGTCAACATCTACACCGCACTTCTCTTTCAGA +
Preference number: 1 (lower is better)
Translates to: IRFNFISCFLIRFFF*VMRRSTSTPHFSFR
Trigger: TCTGAAAGAGAAGTGCGGTGTAGATGTTGACCGCCTCATCACCCAGAAGAAGAAACGAATCAAAAAGCAGGAGATGAAGTTAAAGCGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGTGGCACCTGGAGGTaGCCCAGAGGCAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPGGTWR*PRGRGF
Trigger: AAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACC...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR-3UTR CCA 90 bp GGAGCAGCTCACGGGGAAGCACTGGAAGAAGCCTCCAATGAGGTTACTGAGGCCGTAGTTCCCCAGGGATaGGCAGGGGCAGACGCCGAT +
Preference number: 2 (lower is better)
Translates to: GAAHGEALEEASNEVTEAVVPQG*AGADAD
Trigger: ATCGGCGTCTGCCCCTGCCCATCCCTGGGGAACTAC...GGCCTCAGTAACCTCATTGGAGGCTTCTTCCAGTGCTTCCCCGTGAGCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp TACATCCTGAAGCTCCTCCCCTTGGTGCACCTTGGCCTCAGAGCCCTCGACGTCCACCCGGGACCTCCTTaGCCCCAGAGTATTCTGCCA +
Preference number: 2 (lower is better)
Translates to: YILKLLPLVHLGLRALDVHPGPP*PQSILP
Trigger: TGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTG...GACGTCGAGGGCTCTGAGGCCAAGGTGCACCAAGGGGAGGAGCTTCAGGATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp ACCGGGGGTATGAGCCCTGTGGTGATGTTGCCCACCACATCGACCTTGAATCTGGTAGTTCCCCAGGGATaGGCAGGGGCAGACGCCGAT +
Preference number: 2 (lower is better)
Translates to: TGGMSPVVMLPTTSTLNLVVPQG*AGADAD
Trigger: ATCGGCGTCTGCCCCTGCCCATCCCTGGGGAACTAC...CAGATTCAAGGTCGATGTGGTGGGCAACATCACCACAGGGCTCATACCCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp CCGTGCTCTCCTGTACCAAGCTCCGAGACATGGAGCAGCTCACGGGGAAGCACTTCTTCCCCAGTGAGATaGCAATGGCGAAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: PCSPVPSSETWSSSRGSTSSPVR*QWRSPP
Trigger: TGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGA...AGTGCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTTGGTACAGGAGAGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 90 bp GCAATGGCAAAGGCATTTCCCACAAGCGTTGCAAACAGCTCTGTCTaGGGTGCCACCGGGGGTATGAGCCCTGTGGTGATGTTGCCCACC +
Preference number: 2 (lower is better)
Translates to: AMAKAFPTSVANSSV*GATGGMSPVVMLPT
Trigger: GGTGGGCAACATCACCACAGGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR GCA 90 bp AGGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCCAGCTCTGTCTTGGGTaGCACCGGGGGTATGAGCCC +
Preference number: 2 (lower is better)
Translates to: RIVATKVTSQISRSTLFAQLCLG*HRGYEP
Trigger: GGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTG...GGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 90 bp GCCAGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTaGGGAGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: ASLTAIPCPRPVALN*GVPGHPSMNCMCRY
Trigger: GTACCTGCACATACAATTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR CAA 90 bp GGAAGCCTGGCTGAGGCAGGCCCAGGGACTTCAGTGAGGTCATGGTaGGGGCCTTGGCATCTTCTTGATTGCTGGAGACTACATCCTGAA +
Preference number: 2 (lower is better)
Translates to: GSLAEAGPGTSVRSW*GPWHLLDCWRLHPE
Trigger: TTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGCCAGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR TCA 90 bp TCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTGGCACCTGGAGCAGCCAAGGCCAGCCTaGCTGCAATACCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: SMNCMCRYMEWSPRWHLEQPRPA*LQYPAP
Trigger: TGGGGCAGGGTATTGCAGTCAGGCTGGCCTTGGCTG...CTCCAGGTGCCACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR-3UTR GCA 90 bp TGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCTTCCAAACAGCTCTGTCTTGGGTaGCACCGGGGGTATGAGCCC +
Preference number: 2 (lower is better)
Translates to: WPQRSPARLAGPLCLPSKQLCLG*HRGYEP
Trigger: GGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTG...TTTGGAAGGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 90 bp TCACAACCTCCAGAGGTAGGCAGTCTCCTGCAGCAAAGTCAGAGTTaGGTGGCCAAAACAGGGCTCTTAGGGACAGACTTCCGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SQPPEVGSLLQQSQS*VAKTGLLGTDFRWL
Trigger: CAGCCACCGGAAGTCTGTCCCTAAGAGCCCTGTTTTGGCCACCAAACTCTGACTTTGCTGCAGGAGACTGCCTACCTCTGGAGGTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp TCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCTGCAGGTACATGGAATaGAGTCCCAGGTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: SQSCIPTSAPFQHPAKASCRYME*SPRWHL
Trigger: CAGGTGCCACCTGGGACTCCATTCCATGTACCTGCA...GCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR CAA 90 bp GCCTGTAGCACTGAACTTGGGAGTCCCAGGGCATCCATCCATGAATaGTATGTGCAGGTACATGGAATGGAGTCCCAGGTGGCACCTGGA +
Preference number: 2 (lower is better)
Translates to: ACSTELGSPRASIHE*YVQVHGMESQVAPG
Trigger: TCCAGGTGCCACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR CAA 90 bp TCCCCTTGGTGCACCTTGGCCTCAGAGCCCTCGACGTCATTGCTTTaGACGTCTTCCAAGTTGGTGTTGACGTTGACGGAAACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SPWCTLASEPSTSLL*TSSKLVLTLTETEE
Trigger: CTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGAGGGCTCTGAGGCCAAGGTGCACCAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR GCA 90 bp GCTGAGGCAGGCCCAGGGACTTCAGTGAGGTCATGGTTGGGGCCTTGGCATCTTGGCCCCAGAGTATTCTaGCACGTCTCTATAAATATC +
Preference number: 2 (lower is better)
Translates to: AEAGPGTSVRSWLGPWHLGPRVF*HVSINI
Trigger: GATATTTATAGAGACGTGGCAGAATACTCTGGGGCC...AAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp GCTCCTGGTTACTGTCCACACGGTAGCCATGCCTCAGGGCAAAGATCTTCCCCAAGCCCACCACAGCAATaGCAAAGGCATTTCCCACAA +
Preference number: 2 (lower is better)
Translates to: APGYCPHGSHASGQRSSPSPPQQ*QRHFPQ
Trigger: TTGTGGGAAATGCCTTTGCCATTGCTGTGGTGGGCT...TGGGGAAGATCTTTGCCCTGAGGCATGGCTACCGTGTGGACAGTAACCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp ATCATGCCCTTTAGGTTCACAATAATGACAGCAGCCAGGACGGCCTTGGGCAGGTCTTCCCCAGTGAGATaGCAATGGCGAAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: IMPFRFTIMTAARTALGRSSPVR*QWRSPP
Trigger: TGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGA...CCTGCCCAAGGCCGTCCTGGCTGCTGTCATTATTGTGAACCTAAAGGGCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGTGCAGGTACATGGAATaGAGTCCCAGGTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQCRYME*SPRWHL
Trigger: CAGGTGCCACCTGGGACTCCATTCCATGTACCTGCA...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR-3UTR CCA 90 bp CCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTGTATGTGCAGGTACATaGAATGGAGTCCCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: PKLYSHISSFSAPSQGQPVCAGT*NGVPGG
Trigger: GCCACCTGGGACTCCATTCCATGTACCTGCACATAC...AGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR-3UTR CCA 90 bp AAGAAGGATAAAAAGGGAAGATACAGCTCCAGCAACCTGTGTGTTGCCTCCCGTCCAAGCTCCGAGACATaGAGCAGCTCACGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: KKDKKGRYSSSNLCVASRPSSET*SSSRGS
Trigger: GCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTTGG...ACGGGAGGCAACACACAGGTTGCTGGAGCTGTATCTTCCCTTTTTATCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 90 bp AGAAGACTATGGAAACTGCCAGGCCAATGTCCAGGTTCAGCAGGATaGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGT +
Preference number: 2 (lower is better)
Translates to: RRLWKLPGQCPGSAG*WPQRSPARLAGPLC
Trigger: ACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR TCA 90 bp AGTATTCTGCCACGTCTCTATAAATATCCGTATCTGGCACCTGCCCCAGGACGGAAAGATCTTCCCCAGTaGGATGGCAATGGCGAAGCC +
Preference number: 2 (lower is better)
Translates to: SILPRLYKYPYLAPAPGRKDLPQ*DGNGEA
Trigger: GGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTT...CCGTCCTGGGGCAGGTGCCAGATACGGATATTTATAGAGACGTGGCAGAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp CAGAGTATTCTGCCACGTCTCTATAAATATCCGTATCTGGCACCTGCCCCAGGACTCACGGGGAAGCACTaGAAGAAGCCTCCAATGAGG +
Preference number: 2 (lower is better)
Translates to: QSILPRLYKYPYLAPAPGLTGKH*KKPPMR
Trigger: CCTCATTGGAGGCTTCTTCCAGTGCTTCCCCGTGAG...TCCTGGGGCAGGTGCCAGATACGGATATTTATAGAGACGTGGCAGAATACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp TGGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCGGTGGCACCTGGAGGTaGCCCAGAGGCAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: WTDKFIPKAVFPHQLLFSGGTWR*PRGRGF
Trigger: AAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACC...GCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR-3UTR CCA 90 bp AAAACAGGGCTCTTAGGGACAGACTTCCGGTGGCTGAGGGCAAAGGTCACAGCGGAAGCATCCTGTTTCTaGGACTTCTTGGCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: KTGLLGTDFRWLRAKVTAEASCF*DFLAFF
Trigger: GAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTC...CGCTGTGACCTTTGCCCTCAGCCACCGGAAGTCTGTCCCTAAGAGCCCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp GACCACAGGACTGTAACAGGCTGCGATGTACACTTCCACTTCAATCTCCCGGAAATAAATATCCGTATCTaGCACCTGCCCCAGGACGGA +
Preference number: 2 (lower is better)
Translates to: DHRTVTGCDVHFHFNLPEINIRI*HLPQDG
Trigger: TCCGTCCTGGGGCAGGTGCCAGATACGGATATTTAT...TTCCGGGAGATTGAAGTGGAAGTGTACATCGCAGCCTGTTACAGTCCTGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 90 bp TTGGCCTCAGAGCCCTCGACGTCATTGCTTTTGACGTCTTCCAAGTaGGTGTTGACGTTGACGGAAACTGAGGAGATCTTGGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LASEPSTSLLLTSSK*VLTLTETEEILEEA
Trigger: TGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGAGGGCTCTGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR TCA 90 bp AGTATTCTGCCACGTCTCTATAAATATCCGTATCTGGCACCTGCCCCAGGACGGAAGAGAGCAGATGTCTaGGAACTGCTTCATCATGCC +
Preference number: 2 (lower is better)
Translates to: SILPRLYKYPYLAPAPGRKRADV*ELLHHA
Trigger: GGCATGATGAAGCAGTTCTCAGACATCTGCTCTCTT...CCGTCCTGGGGCAGGTGCCAGATACGGATATTTATAGAGACGTGGCAGAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR GCA 90 bp AAAACAGGGCTCTTAGGGACAGACTTCCGGTGGCTGAGGGCAAAGGTCACAGCGGAGGCAAAGACATGCTaGTTAGTGATAGATTCATCA +
Preference number: 2 (lower is better)
Translates to: KTGLLGTDFRWLRAKVTAEAKTC*LVIDSS
Trigger: TGATGAATCTATCACTAAGCAGCATGTCTTTGCCTC...CGCTGTGACCTTTGCCCTCAGCCACCGGAAGTCTGTCCCTAAGAGCCCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp CTTCTTGATTGCTGGAGACTACATCCTGAAGCTCCTCCCCTTGGTGCACCTTGGATTCGTTTCTTCTTCTaGGTGATGAGGCGGTCAACA +
Preference number: 2 (lower is better)
Translates to: LLDCWRLHPEAPPLGAPWIRFFF*VMRRST
Trigger: TGTTGACCGCCTCATCACCCAGAAGAAGAAACGAAT...CCAAGGTGCACCAAGGGGAGGAGCTTCAGGATGTAGTCTCCAGCAATCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 90 bp CCCTCGACGTCATTGCTTTTGACGTCTTCCAAGTTGGTGTTGACGTaGACGGAAACTGAGGAGATCTTGGAAGAAGCATCCTGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: PSTSLLLTSSKLVLT*TETEEILEEASCFW
Trigger: CCAGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 90 bp TCAGAGCCCTCGACGTCATTGCTTTTGACGTCTTCCAAGTTGGTGTaGACGTTGACGGAAACTGAGGAGATCTTGGAAGAAGCATCCTGT +
Preference number: 2 (lower is better)
Translates to: SEPSTSLLLTSSKLV*TLTETEEILEEASC
Trigger: ACAGGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGAGGGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CCA 90 bp TTGGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGTGCAGGTACATGGAATaGAGTCCCAGGTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: LDRQIYSQSCIPTSAPFQCRYME*SPRWHL
Trigger: CAGGTGCCACCTGGGACTCCATTCCATGTACCTGCA...CTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR-3UTR CCA 90 bp GGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCAGTATGTGCAGGTACATaGAATGGAGTCCCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: GQTNLFPKLYSHISSFSAVCAGT*NGVPGG
Trigger: GCCACCTGGGACTCCATTCCATGTACCTGCACATAC...TGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR CAA 90 bp ACGTCTTCCAAGTTGGTGTTGACGTTGACGGAAACTGAGGAGATCTaGGAAGAAGCATCCTGTTTCTGGGACTTCTTGGCTTTCTTCATT +
Preference number: 2 (lower is better)
Translates to: TSSKLVLTLTETEEI*EEASCFWDFLAFFI
Trigger: AATGAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 90 bp GACTTCTTGGCTTTCTTCATTCGCTTTAACTTCATCTCCTGCTTTTaGATTCGTTTCTTCTTCTGGGTGATGAGGCGGTCAACATCTACA +
Preference number: 2 (lower is better)
Translates to: DFLAFFIRFNFISCF*IRFFFWVMRRSTST
Trigger: TGTAGATGTTGACCGCCTCATCACCCAGAAGAAGAAACGAATCAAAAAGCAGGAGATGAAGTTAAAGCGAATGAAGAAAGCCAAGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 90 bp GAAACTGAGGAGATCTTGGAAGAAGCATCCTGTTTCTGGGACTTCTaGGCTTTCTTCATTCGCTTTAACTTCATCTCCTGCTTTTTGATT +
Preference number: 2 (lower is better)
Translates to: ETEEILEEASCFWDF*AFFIRFNFISCFLI
Trigger: AATCAAAAAGCAGGAGATGAAGTTAAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 72 bp TGCCTCCCGTGCTCTCCTGTACCAAGCTCCGAGACATaGAGCAGCTCACGGGGAAGCACTGGAAGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: CLPCSPVPSSET*SSSRGSTGRSL
Trigger: GAGGCTTCTTCCAGTGCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTTGGTACAGGAGAGCACGGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp GCTGAGGCAGGCCCAGGGACTTCAGTGAGGTCATGGTTGGGGCCTTGGCATCTTGCAGGTCCACTCTGTTaGCCTTCCAAAGAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: AEAGPGTSVRSWLGPWHLAGPLC*PSKESR
Trigger: TCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCTGC...AAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 72 bp AGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTGACTaGAATACCCTGCCCCAGGCCTGTAGCACTGAACTT +
Preference number: 3 (lower is better)
Translates to: SSFSAPSQGQPD*NTLPQACSTEL
Trigger: AAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR TCA 72 bp GCTGTAGAGCTCAGCATTGGCGAAGTACAGCGTGGCTaGGGAACGGAAGACTTTCACACCCGGGACCTCCTT +
Preference number: 3 (lower is better)
Translates to: AVELSIGEVQRG*GTEDFHTRDLL
Trigger: AAGGAGGTCCCGGGTGTGAAAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCAATGCTGAGCTCTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 72 bp ATTTCCCACAAGCGTTGCAAACAGCTCTGTCTTGGGTaGCACCGGGGGTATGAGCCCTGTGGTGATGTTGCC +
Preference number: 3 (lower is better)
Translates to: ISHKRCKQLCLG*HRGYEPCGDVA
Trigger: GGCAACATCACCACAGGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 72 bp AAGATACAGCTCCAGCAACCTGTGTGTTGCCTCCCGTaGTCTCCTGTACCAAGCTCCGAGACATGGAGCAGC +
Preference number: 3 (lower is better)
Translates to: KIQLQQPVCCLP*SPVPSSETWSS
Trigger: GCTGCTCCATGTCTCGGAGCTTGGTACAGGAGAGCACGGGAGGCAACACACAGGTTGCTGGAGCTGTATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp AGCCATGCCTCAGGGCAAAGATCTTCCCCAGTGAGATaGCAATGGCGAAGCCCACCACAGCAATGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: SHASGQRSSPVR*QWRSPPQQWQR
Trigger: CCTTTGCCATTGCTGTGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTTGCCCTGAGGCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp AAGCTCCGAGACATGGAGCAGCTCACGGGGAAGCACTaGAAGAAGCCTCCAATGAGGTTACTGAGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: KLRDMEQLTGKH*KKPPMRLLRPR
Trigger: CCTTGGCCTCAGTAACCTCATTGGAGGCTTCTTCCAGTGCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp AGTCGCTGTAGAGCTCAGCATTGGCGAAGTACAGCGTaGCTGAGGAACGGAAGACTTTCACACCCGGGACCT +
Preference number: 3 (lower is better)
Translates to: SRCRAQHWRSTA*LRNGRLSHPGP
Trigger: AGGTCCCGGGTGTGAAAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCAATGCTGAGCTCTACAGCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp ATCATGCCCTTTAGGTTCACAATAATGACAGCAGCCAGGACGGCCTTGGGCAGGCCTGTAGCACTGAACTaGGGAGTCCCAGGGCATCCA +
Preference number: 3 (lower is better)
Translates to: IMPFRFTIMTAARTALGRPVALN*GVPGHP
Trigger: TGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGG...CCTGCCCAAGGCCGTCCTGGCTGCTGTCATTATTGTGAACCTAAAGGGCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 72 bp CACCACAGCAATGGCAAAGGCATTTCCCACAAGCGTTaGAAACAGCTCTGTCTTGGGTGCCACCGGGGGTAT +
Preference number: 3 (lower is better)
Translates to: HHSNGKGISHKR*KQLCLGCHRGY
Trigger: ATACCCCCGGTGGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCCATTGCTGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 72 bp GACGACCACGAGCAGCAAGGAGAAGACTATGGAAACTaGCAGGCCAATGTCCAGGTTCAGCAGGATTGTGGC +
Preference number: 3 (lower is better)
Translates to: DDHEQQGEDYGN*QANVQVQQDCG
Trigger: GCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTCTCCTTGCTGCTCGTGGTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp GCCTCAGGGCAAAGATCTTCCCCAGTGAGATGGCAATaGCGAAGCCCACCACAGCAATGGCAAAGGCATTTC +
Preference number: 3 (lower is better)
Translates to: ASGQRSSPVRWQ*RSPPQQWQRHF
Trigger: GAAATGCCTTTGCCATTGCTGTGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTTGCCCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp GCATTCGGACGACCACGAGCAGCAAGGAGAAGACTATaGAAACTGCCAGGCCAATGTCCAGGTTCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: AFGRPRAARRRL*KLPGQCPGSAG
Trigger: TCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTCTCCTTGCTGCTCGTGGTCGTCCGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR GCA 72 bp TTGGGAGTCCCAGGGCATCCATCCATGAATTGTATGTaGAGGTACATGGAATGGAGTCCCAGGTGGCACCTG +
Preference number: 3 (lower is better)
Translates to: LGVPGHPSMNCM*RYMEWSPRWHL
Trigger: CAGGTGCCACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR GCA 72 bp AGCTTCAAGCTGGGCGACCACAGGACTGTAACAGGCTaGGATGTACACTTCCACTTCAATCTCCCGGAAGTC +
Preference number: 3 (lower is better)
Translates to: SFKLGDHRTVTG*DVHFHFNLPEV
Trigger: GACTTCCGGGAGATTGAAGTGGAAGTGTACATCGCAGCCTGTTACAGTCCTGTGGTCGCCCAGCTTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 72 bp AAACTGCCAGGCCAATGTCCAGGTTCAGCAGGATTGTaGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCA +
Preference number: 3 (lower is better)
Translates to: KLPGQCPGSAGL*PQRSPARLAGP
Trigger: TGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp AGGTCATGGTTGGGGCCTTGGCATCTTCTTGATTGCTaGAGACTACATCCTGAAGCTCCTCCCCTTGGTGCA +
Preference number: 3 (lower is better)
Translates to: RSWLGPWHLLDC*RLHPEAPPLGA
Trigger: TGCACCAAGGGGAGGAGCTTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CCA 72 bp GGCCCAGGGACTTCAGTGAGGTCATGGTTGGGGCCTTaGCATCTTCTTGATTGCTGGAGACTACATCCTGAA +
Preference number: 3 (lower is better)
Translates to: GPGTSVRSWLGP*HLLDCWRLHPE
Trigger: TTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp TGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCATGTTTCTGGGACTTCTaGGCTTTCTTCATTCGCTTT +
Preference number: 3 (lower is better)
Translates to: WRWPRGRGFHEGDLSQPPCFWDF*AFFIRF
Trigger: AAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAACA...TGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp GTGGCCAAAACAGGGCTCTTAGGGACAGACTTCCGGTGGCTGAGGGCAAAGGTCGAAACTGAGGAGATCTaGGAAGAAGCATCCTGTTTC +
Preference number: 3 (lower is better)
Translates to: VAKTGLLGTDFRWLRAKVETEEI*EEASCF
Trigger: GAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTC...GACCTTTGCCCTCAGCCACCGGAAGTCTGTCCCTAAGAGCCCTGTTTTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR GCA 72 bp TTTCACACCCGGGACCTCCTTGGCCCCAGAGTATTCTaGCACGTCTCTATAAATATCCGTATCTGGCACCTG +
Preference number: 3 (lower is better)
Translates to: FHTRDLLGPRVF*HVSINIRIWHL
Trigger: CAGGTGCCAGATACGGATATTTATAGAGACGTGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp AGAGTATTCTGCCACGTCTCTATAAATATCCGTATCTaGCACCTGCCCCAGGACGGAGTAATGGGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: RVFCHVSINIRI*HLPQDGVMGQL
Trigger: CAGCTGCCCCATTACTCCGTCCTGGGGCAGGTGCCAGATACGGATATTTATAGAGACGTGGCAGAATACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp GACTTCCGGTGGCTGAGGGCAAAGGTCACAGCGTCATaGACAGAGGCAAAGACATGCTGCTTAGTGATAGAT +
Preference number: 3 (lower is better)
Translates to: DFRWLRAKVTAS*TEAKTCCLVID
Trigger: ATCTATCACTAAGCAGCATGTCTTTGCCTCTGTCCATGACGCTGTGACCTTTGCCCTCAGCCACCGGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp CTTTCACACCCGGGACCTCCTTGGCCCCAGAGTATTCTGCCACGTCTCTATAAACCCACCACATCGACCTaGAATCTGTCATTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LSHPGPPWPQSILPRLYKPTTST*NLSFSF
Trigger: GAAGCTGAATGACAGATTCAAGGTCGATGTGGTGGG...TTTATAGAGACGTGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp CTGAGGAACGGAAGACTTTCACACCCGGGACCTCCTTaGCCCCAGAGTATTCTGCCACGTCTCTATAAATAT +
Preference number: 3 (lower is better)
Translates to: LRNGRLSHPGPP*PQSILPRLYKY
Trigger: ATATTTATAGAGACGTGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGTGAAAGTCTTCCGTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CCA 72 bp ACTTCTCTTTCAGAGAGTCGCTGTAGAGCTCAGCATTaGCGAAGTACAGCGTGGCTGAGGAACGGAAGACTT +
Preference number: 3 (lower is better)
Translates to: TSLSESRCRAQH*RSTAWLRNGRL
Trigger: AAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCAATGCTGAGCTCTACAGCGACTCTCTGAAAGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp AGGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCAAGAGTTCCCCAAGTTaGACGATAATAAGAAGGATA +
Preference number: 3 (lower is better)
Translates to: RIVATKVTSQISRSTLFAKSSPS*TIIRRI
Trigger: TATCCTTCTTATTATCGTCAAACTTGGGGAACTCTT...GGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp GGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCTAAGAGTTCCCCAAGTTaGACGATAATAAGAAGGATA +
Preference number: 3 (lower is better)
Translates to: GLWPQRSPARLAGPLCLPKSSPS*TIIRRI
Trigger: TATCCTTCTTATTATCGTCAAACTTGGGGAACTCTT...AGGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR-3UTR CAA 90 bp GGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCAGGCCTTGGCATCTTCTaGATTGCTGGAGACTACATC +
Preference number: 3 (lower is better)
Translates to: GQTNLFPKLYSHISSFSAGLGIF*IAGDYI
Trigger: GATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCC...TGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGCAGCTCTGTCTTGGGTaGCACCGGGGGTATGAGCCC +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEQLCLG*HRGYEP
Trigger: GGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTG...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGAGCTCCTCCCCTTGGTaGACCTTGGCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHESSSPW*TLASEP
Trigger: GGGCTCTGAGGCCAAGGTGCACCAAGGGGAGGAGCT...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGCCTGAGGAAGCTGCATaGTGGCCACACTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEPEEAA*WPHSGQ
Trigger: CTGGCCTGAGTGTGGCCATCATGCAGCTTCCTCAGG...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGCAGCTCTGTCTTGGGTaGCACCGGGGGTATGAGCCC +
Preference number: 4 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGQLCLG*HRGYEP
Trigger: GGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTG...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGTTCCCCAGGGATGGGCAGGGGCAGACGCCGATGCAGCTTCTCATTAAGTAGCAGGCCCAGCCCCACCTaGAAGAGGCCGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSPGMGRGRRRCSFSLSSRPSPT*KRPTRK
Trigger: CTTCCTGGTCGGCCTCTTCCAGGTGGGGCTGGGCCT...GCTACTTAATGAGAAGCTGCATCGGCGTCTGCCCCTGCCCATCCCTGGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR CCA 90 bp CCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCGTAGTTCCCCAGGGATaGGCAGGGGCAGACGCCGAT +
Preference number: 4 (lower is better)
Translates to: PRGRGFHEGDLSQPPEVGVVPQG*AGADAD
Trigger: ATCGGCGTCTGCCCCTGCCCATCCCTGGGGAACTAC...GCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGCCAAGCTCCGAGACATaGAGCAGCTCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEPSSET*SSSRGS
Trigger: GCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTTGG...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCCCTGAGGAAGCTGCATaGTGGCCACACTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRGRGFHEGDLSQPPEVGPEEAA*WPHSGQ
Trigger: CTGGCCTGAGTGTGGCCATCATGCAGCTTCCTCAGG...GCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTAGGCCCAGCCCCACCTaGAAGAGGCCGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSRPSPT*KRPTRK
Trigger: CTTCCTGGTCGGCCTCTTCCAGGTGGGGCTGGGCCT...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GGAATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGCTCACGGGGAAGCACTaGAAGAAGCCTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: GMESQVAPGGGPEAGGFMLTGKH*KKPPMR
Trigger: CCTCATTGGAGGCTTCTTCCAGTGCTTCCCCGTGAG...CATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGCGGACCAGAGGCTCTaGCAGGTAGGTGACAACGAA +
Preference number: 4 (lower is better)
Translates to: WRWPRGRGFHEGDLSQPPADQRL*QVGDNE
Trigger: TTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGC...TGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCACCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCCTATGGAAGCCTGGCTaGGGCAGGCCCAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: PKAVFPHQLLFSTQPRPALWKPG*GRPRDF
Trigger: GAAGTCCCTGGGCCTGCCTCAGCCAGGCTTCCATAG...GGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGTGCTCAGGTCCAGGATaGGGCTATGGAAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGCSGPG*GYGSLA
Trigger: AGCCAGGCTTCCATAGCCTCATCCTGGACCTGAGCA...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCACAGACTTCCGGTGGCTaGGGGCAAAGGTCACAGCGT +
Preference number: 4 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPQTSGG*GQRSQR
Trigger: ACGCTGTGACCTTTGCCCTCAGCCACCGGAAGTCTG...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp GCTGAGGCAGGCCCAGGGACTTCAGTGAGGTCATGGTTGGGGCCTTGGCATCTTTACCAAGGCCACTCCTaGCACAATCGCCGTGACCAC +
Preference number: 4 (lower is better)
Translates to: AEAGPGTSVRSWLGPWHLYQGHS*HNRRDH
Trigger: GTGGTCACGGCGATTGTGGCAGGAGTGGCCTTGGTA...AAGATGCCAAGGCCCCAACCATGACCTCACTGAAGTCCCTGGGCCTGCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp TGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGTGTGTTGCCTCCCGTaGTCTCCTGTACCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WRWPRGRGFHEGDLSQPPVCCLP*SPVPSS
Trigger: GGAGCTTGGTACAGGAGAGCACGGGAGGCAACACAC...TGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCACCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCACCAAGCTCCGAGACATaGAGCAGCTCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPPSSET*SSSRGS
Trigger: GCTTCCCCGTGAGCTGCTCCATGTCTCGGAGCTTGG...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTACACCCGGGACCTCCTTaGCCCCAGAGTATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WPRGRGFHEGDLSQPPEVHPGPP*PQSILP
Trigger: TGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTG...TACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GGAATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGTGGCGAAGTACAGCGTaGCTGAGGAACGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: GMESQVAPGGGPEAGGFMWRSTA*LRNGRL
Trigger: AAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCA...CATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGGGGACAGACTTCCGGTaGCTGAGGGCAAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGGTDFR*LRAKVT
Trigger: TGTGACCTTTGCCCTCAGCCACCGGAAGTCTGTCCC...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp ACCGGGGGTATGAGCCCTGTGGTGATGTTGCCCACCACATCGACCTTGAATCTGCCTGAGGAAGCTGCATaGTGGCCACACTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGGMSPVVMLPTTSTLNLPEEAA*WPHSGQ
Trigger: CTGGCCTGAGTGTGGCCATCATGCAGCTTCCTCAGG...CAGATTCAAGGTCGATGTGGTGGGCAACATCACCACAGGGCTCATACCCCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR CCA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGTGCAGCTCCATTTCTTaGGCTGCAGACAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGCSSIS*AADRSA
Trigger: GGCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCA...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188557.8
CDS-3UTR CCA 90 bp CCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGGACTGGAACGTGCTaGAGCAGAAGAGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PRGRGFHEGDLSQPPEVGRTGTC*SRREWA
Trigger: GGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCT...GCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCGTAGTTCCCCAGGGATaGGCAGGGGCAGACGCCGAT +
Preference number: 4 (lower is better)
Translates to: SQSCIPTSAPFQHPAKASVVPQG*AGADAD
Trigger: ATCGGCGTCTGCCCCTGCCCATCCCTGGGGAACTAC...GCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GGAATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGACTTCAGTGAGGTCATaGTTGGGGCCTTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: GMESQVAPGGGPEAGGFMTSVRS*LGPWHL
Trigger: AAGATGCCAAGGCCCCAACCATGACCTCACTGAAGT...CATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGCCTTGGCATCTTCTTaGTTGCTGGAGACTACATCC +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEALASS*LLETTS
Trigger: GGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGC...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTGCTCAGGTCCAGGATaGGGCTATGGAAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PKAVFPHQLLFSTQPRPACSGPG*GYGSLA
Trigger: AGCCAGGCTTCCATAGCCTCATCCTGGACCTGAGCA...GGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTTACCAAGGCCACTCCTaGCACAATCGCCGTGACCAC +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSYQGHS*HNRRDH
Trigger: GTGGTCACGGCGATTGTGGCAGGAGTGGCCTTGGTA...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGAGCTCCTCCCCTTGGTaGACCTTGGCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQSSSPW*TLASEP
Trigger: GGGCTCTGAGGCCAAGGTGCACCAAGGGGAGGAGCT...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp GGAATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGACTGTAACAGGCTaGGATGTACACTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GMESQVAPGGGPEAGGFMRTVTG*DVHFHF
Trigger: GAAGTGGAAGTGTACATCGCAGCCTGTTACAGTCCT...CATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGAGGCCCAGCCCCACCTaGAAGAGGCCGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PRASIHELYVQVHGMESQRPSPT*KRPTRK
Trigger: CTTCCTGGTCGGCCTCTTCCAGGTGGGGCTGGGCCT...CTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGGATAAAAAGGGAAGATACAGCTCCAGCAACCTGTGTGTTGCCTCCCGTGCTCAGGCCCAGCCCCACCTaGAAGAGGCCGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RIKREDTAPATCVLPPVLRPSPT*KRPTRK
Trigger: CTTCCTGGTCGGCCTCTTCCAGGTGGGGCTGGGCCT...GAGCACGGGAGGCAACACACAGGTTGCTGGAGCTGTATCTTCCCTTTTTATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR TCA 90 bp AGGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCCCTGAGGAAGCTGCATaGTGGCCACACTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RIVATKVTSQISRSTLFAPEEAA*WPHSGQ
Trigger: CTGGCCTGAGTGTGGCCATCATGCAGCTTCCTCAGG...GGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR TCA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAAAAGATCTTCCCCAGTaGGATGGCAATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPKDLPQ*DGNGEA
Trigger: GGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTT...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGGCCTTGGCATCTTCTTaGTTGCTGGAGACTACATCC +
Preference number: 4 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGALASS*LLETTS
Trigger: GGATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGC...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp GAGGTTACTGAGGCCAAGGGCTACCAGCTCCTGGTTACTGTCCACACGGTAGCCCCCAGATCTTCTAGCTaGTCCTGGTTCAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: EVTEAKGYQLLVTVHTVAPRSSS*SWFSNG
Trigger: GCCATTGCTGAACCAGGAGCAGCTAGAAGATCTGGG...GGCTACCGTGTGGACAGTAACCAGGAGCTGGTAGCCCTTGGCCTCAGTAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp CCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTGTGTGTTGCCTCCCGTaGTCTCCTGTACCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PKLYSHISSFSAPSQGQPVCCLP*SPVPSS
Trigger: GGAGCTTGGTACAGGAGAGCACGGGAGGCAACACAC...AGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCAGGACTGGAACGTGCTaGAGCAGAAGAGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PKAVFPHQLLFSTQPRPARTGTC*SRREWA
Trigger: GGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCT...GGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTACAGTCTCAGGGAGCTaGGCACAGACCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PKLYSHISSFSAPSQGQPTVSGS*AQTSST
Trigger: AGTGCTGGAGGTCTGTGCCCAGCTCCCTGAGACTGT...AGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCCAGTGAGATGGCAATaGCGAAGCCCACCACAGCAA +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSPVRWQ*RSPPQQ
Trigger: TTGCTGTGGTGGGCTTCGCCATTGCCATCTCACTGG...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCTCATGGTTGGGGCCTTaGCATCTTCTTGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRGRGFHEGDLSQPPEVGSWLGP*HLLDCW
Trigger: CCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGA...GCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
3UTR CAA 72 bp AAGGCATTTCCCACAAGCGTTGCAAACAGCTCTGTCTaGGGTGCCACCGGGGGTATGAGCCCTGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: KAFPTSVANSSV*GATGGMSPVVM
Trigger: CATCACCACAGGGCTCATACCCCCGGTGGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR TCA 90 bp ATCATGCCCTTTAGGTTCACAATAATGACAGCAGCCAGGACGGCCTTGGGCAGGGCGGACCAGAGGCTCTaGCAGGTAGGTGACAACGAA +
Preference number: 4 (lower is better)
Translates to: IMPFRFTIMTAARTALGRADQRL*QVGDNE
Trigger: TTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGC...CCTGCCCAAGGCCGTCCTGGCTGCTGTCATTATTGTGAACCTAAAGGGCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCCCAGATCTTCTAGCTaGTCCTGGTTCAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSPRSSS*SWFSNG
Trigger: GCCATTGCTGAACCAGGAGCAGCTAGAAGATCTGGG...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCTCCTGCCCAGATCTTCTAGCTaGTCCTGGTTCAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: RGFHEGDLSQPPEVGSLLPRSSS*SWFSNG
Trigger: GCCATTGCTGAACCAGGAGCAGCTAGAAGATCTGGG...CAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp CCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTCCCAGGACTGGAACGTaGTGGAGCAGAAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: PKLYSHISSFSAPSQGQPPRTGT*WSRREW
Trigger: CCATTCTCTTCTGCTCCAGCACGTTCCAGTCCTGGG...AGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp GCAATGGCAAAGGCATTTCCCACAAGCGTTGCAAACAGCTCTGTCTTGGGTGCCTACCAAGGCCACTCCTaGCACAATCGCCGTGACCAC +
Preference number: 4 (lower is better)
Translates to: AMAKAFPTSVANSSVLGAYQGHS*HNRRDH
Trigger: GTGGTCACGGCGATTGTGGCAGGAGTGGCCTTGGTA...GGCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGAGGACTGTAACAGGCTaGGATGTACACTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGRTVTG*DVHFHF
Trigger: GAAGTGGAAGTGTACATCGCAGCCTGTTACAGTCCT...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCTAGGACTGGAACGTGCTaGAGCAGAAGAGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PKLYSHISSFSAPSQGQPRTGTC*SRREWA
Trigger: GGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCT...AGGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GCAGGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGACAGTCTCAGGGAGCTaGGCACAGACCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: AGLWPQRSPARLAGPLCLTVSGS*AQTSST
Trigger: AGTGCTGGAGGTCTGTGCCCAGCTCCCTGAGACTGT...CAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR CCA 90 bp CTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGCATCCATCCATGAAAGCCCACCACAGCAATaGCAAAGGCATTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: LPQACSTELGSPRASIHESPPQQ*QRHFPQ
Trigger: TTGTGGGAAATGCCTTTGCCATTGCTGTGGTGGGCT...TTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAATAAATATCCGTATCTaGCACCTGCCCCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPINIRI*HLPQDG
Trigger: TCCGTCCTGGGGCAGGTGCCAGATACGGATATTTAT...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GGAATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGCATCTTCTTGATTGCTaGAGACTACATCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GMESQVAPGGGPEAGGFMHLLDC*RLHPEA
Trigger: AGCTTCAGGATGTAGTCTCCAGCAATCAAGAAGATG...CATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGCATCCATCCATGAAACTTCAGTGAGGTCATaGTTGGGGCCTTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LPQACSTELGSPRASIHETSVRS*LGPWHL
Trigger: AAGATGCCAAGGCCCCAACCATGACCTCACTGAAGT...TTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTATGCCAAACACATACTTaGGCTGAGAGACGAGGACTT +
Preference number: 4 (lower is better)
Translates to: WPRGRGFHEGDLSQPPEVCQTHT*AERRGL
Trigger: AAGTCCTCGTCTCTCAGCTCAAGTATGTGTTTGGCA...TACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGGACAGTGGCCCAGAGTaGCTGCTGAGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQDSGPE*LLSLMP
Trigger: TGGCATCAAACTCAGCAGTCACTCTGGGCCACTGTC...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCAAAGATCTTCCCCAGTaGGATGGCAATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQSCIPTSAPFQHPAKASKDLPQ*DGNGEA
Trigger: GGCTTCGCCATTGCCATCTCACTGGGGAAGATCTTT...GCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGCATCCATCCATGAAAAGAGAGCAGATGTCTaGGAACTGCTTCATCATGCC +
Preference number: 4 (lower is better)
Translates to: LPQACSTELGSPRASIHEKRADV*ELLHHA
Trigger: GGCATGATGAAGCAGTTCTCAGACATCTGCTCTCTT...TTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGACTTCCGGTGGCTaGGGGCAAAGGTCACAGCGT +
Preference number: 4 (lower is better)
Translates to: SPRASIHELYVQVHGMESQTSGG*GQRSQR
Trigger: ACGCTGTGACCTTTGCCCTCAGCCACCGGAAGTCTG...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp CCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGTACCAAGGCCACTCCTaGCACAATCGCCGTGACCAC +
Preference number: 4 (lower is better)
Translates to: PRASIHELYVQVHGMESQYQGHS*HNRRDH
Trigger: GTGGTCACGGCGATTGTGGCAGGAGTGGCCTTGGTA...CTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGAAGACTATGGAAACTaGCAGGCCAATGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPEDYGN*QANVQV
Trigger: AACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTC...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGCAGGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTACAGTCTCAGGGAGCTaGGCACAGACCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SRIVATKVTSQISRSTLFTVSGS*AQTSST
Trigger: AGTGCTGGAGGTCTGTGCCCAGCTCCCTGAGACTGT...AAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR CCA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGACAGTCTCAGGGAGCTaGGCACAGACCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRTVSGS*AQTSST
Trigger: AGTGCTGGAGGTCTGTGCCCAGCTCCCTGAGACTGT...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCTCCTGAGCCCACCACAGCAATaGCAAAGGCATTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: RGFHEGDLSQPPEVGSLLSPPQQ*QRHFPQ
Trigger: TTGTGGGAAATGCCTTTGCCATTGCTGTGGTGGGCT...CAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGTCTTCCCCAGTGAGATaGCAATGGCGAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQSSPVR*QWRSPP
Trigger: TGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGA...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCACCCGGGACCTCCTTaGCCCCAGAGTATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPRASIHELYVQVHGMESHPGPP*PQSILP
Trigger: TGGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTG...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGCATCTTCTTGATTGCTaGAGACTACATCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEHLLDC*RLHPEA
Trigger: AGCTTCAGGATGTAGTCTCCAGCAATCAAGAAGATG...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTAAGGTCACAGCGTCATaGACAGAGGCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSKVTAS*TEAKTC
Trigger: GCATGTCTTTGCCTCTGTCCATGACGCTGTGACCTT...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCTCCTGAAGGTCACAGCGTCATaGACAGAGGCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: RGFHEGDLSQPPEVGSLLKVTAS*TEAKTC
Trigger: GCATGTCTTTGCCTCTGTCCATGACGCTGTGACCTT...CAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp ATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGGGACAGACTTCCGGTaGCTGAGGGCAAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: IPKAVFPHQLLFSTQPRPGTDFR*LRAKVT
Trigger: TGTGACCTTTGCCCTCAGCCACCGGAAGTCTGTCCC...TGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
3UTR CAA 72 bp TGGAAACTGCCAGGCCAATGTCCAGGTTCAGCAGGATaGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WKLPGQCPGSAG*WPQRSPARLAG
Trigger: ACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGCTGAACCTGGACATTGGCCTGGCAGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 72 bp ACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTaGGGAGTCCCAGGGCATCCATCCATGAATTGTATG +
Preference number: 4 (lower is better)
Translates to: TAIPCPRPVALN*GVPGHPSMNCM
Trigger: CATACAATTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
3UTR CAA 72 bp CCTTGGTGCACCTTGGCCTCAGAGCCCTCGACGTCATaGCTTTTGACGTCTTCCAAGTTGGTGTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: PWCTLASEPSTS*LLTSSKLVLTL
Trigger: CAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGAGGGCTCTGAGGCCAAGGTGCACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 72 bp CCAGAGGTAGGCAGTCTCCTGCAGCAAAGTCAGAGTTaGGTGGCCAAAACAGGGCTCTTAGGGACAGACTTC +
Preference number: 4 (lower is better)
Translates to: PEVGSLLQQSQS*VAKTGLLGTDF
Trigger: GAAGTCTGTCCCTAAGAGCCCTGTTTTGGCCACCAAACTCTGACTTTGCTGCAGGAGACTGCCTACCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
CDS-3UTR TCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGGCTCTGACAGGTAGGTaGCAACGAAGCCGAAGTGTA +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQALTGR*QRSRSV
Trigger: TACACTTCGGCTTCGTTGTCACCTACCTGTCAGAGC...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGACAGTGGCCCAGAGTaGCTGCTGAGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: PRASIHELYVQVHGMESQDSGPE*LLSLMP
Trigger: TGGCATCAAACTCAGCAGTCACTCTGGGCCACTGTC...CTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCTGGAGACTACATCCTaGAGCTCCTCCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPRASIHELYVQVHGMESLETTS*SSSPWC
Trigger: GCACCAAGGGGAGGAGCTTCAGGATGTAGTCTCCAG...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp GGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCTCAGCACTGTTTGAGCTaGGAGACGAGGACTTGCACA +
Preference number: 4 (lower is better)
Translates to: GLWPQRSPARLAGPLCLPQHCLS*ETRTCT
Trigger: TGTGCAAGTCCTCGTCTCTCAGCTCAAACAGTGCTG...AGGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCAGGTCCACTCTGTTTaGCTTCCAAAGAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSQVHSV*LPKRAD
Trigger: ATCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCTG...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGACAGAGGCAAAGACATaGTGCTTAGTGATAGATTCA +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHETEAKT*CLVIDS
Trigger: TGAATCTATCACTAAGCAGCATGTCTTTGCCTCTGT...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGGATAAAAAGGGAAGATACAGCTCCAGCAACCTGTGTGTTGCCTCCCGTGCTCTGCAGCTCCATTTCTTaGGCTGCAGACAGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RIKREDTAPATCVLPPVLCSSIS*AADRSA
Trigger: GGCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCA...GAGCACGGGAGGCAACACACAGGTTGCTGGAGCTGTATCTTCCCTTTTTATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192559.7
CDS-3UTR CCA 90 bp AGCAATGGCAAAGGCATTTCCCACAAGCGTTGCAAACAGCTCTGTCTTGGGTGCAGGACTGGAACGTGCTaGAGCAGAAGAGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: SNGKGISHKRCKQLCLGCRTGTC*SRREWA
Trigger: GGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCT...GCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCCATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR CCA 90 bp ATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCATCTTCCCCAGTGAGATaGCAATGGCGAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: IPKAVFPHQLLFSTQPRPSSPVR*QWRSPP
Trigger: TGGTGGGCTTCGCCATTGCCATCTCACTGGGGAAGA...TGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGCTCACGGGGAAGCACTaGAAGAAGCCTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRLTGKH*KKPPMR
Trigger: CCTCATTGGAGGCTTCTTCCAGTGCTTCCCCGTGAG...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp CCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGGTTCAGCAGGATTGTaGCCACAAAGGTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PRASIHELYVQVHGMESQGSAGL*PQRSPA
Trigger: GGCTGGTGACCTTTGTGGCCACAATCCTGCTGAACC...CTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTGGCACCTGGAGGGTTCAGCAGGATTGTaGCCACAAAGGTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SMNCMCRYMEWSPRWHLEGSAGL*PQRSPA
Trigger: GGCTGGTGACCTTTGTGGCCACAATCCTGCTGAACC...CTCCAGGTGCCACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGAAGCATCCTGTTTCTaGGACTTCTTGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WPRGRGFHEGDLSQPPEVEASCF*DFLAFF
Trigger: GAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTC...TACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGAAACTGAGGAGATCTTaGAAGAAGCATCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEKLRRS*KKHPVS
Trigger: AGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTT...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTGCCTTCCAAACAGCACTGTTTGAGCTaGGAGACGAGGACTTGCACA +
Preference number: 4 (lower is better)
Translates to: WPQRSPARLAGPLCLPSKQHCLS*ETRTCT
Trigger: TGTGCAAGTCCTCGTCTCTCAGCTCAAACAGTGCTG...TTTGGAAGGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGCCCAGATCTTCTAGCTaGTCCTGGTTCAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRPRSSS*SWFSNG
Trigger: GCCATTGCTGAACCAGGAGCAGCTAGAAGATCTGGG...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp TCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCGAAGACTATGGAAACTaGCAGGCCAATGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SQSCIPTSAPFQHPAKASEDYGN*QANVQV
Trigger: AACCTGGACATTGGCCTGGCAGTTTCCATAGTCTTC...GCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GTCTCTATAAATATCCGTATCTGGCACCTGCCCCAGGACGGAGTAATGGGGCAGTCTTCTAGCTGCTCCTaGTTCAGCAATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSINIRIWHLPQDGVMGQSSSCS*FSNGLS
Trigger: GGAAAGGCCATTGCTGAACCAGGAGCAGCTAGAAGA...CTGCCCCATTACTCCGTCCTGGGGCAGGTGCCAGATACGGATATTTATAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR CCA 90 bp CCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCATTCGTTTCTTCTTCTaGGTGATGAGGCGGTCAACA +
Preference number: 4 (lower is better)
Translates to: PKAVFPHQLLFSTQPRPAIRFFF*VMRRST
Trigger: TGTTGACCGCCTCATCACCCAGAAGAAGAAACGAAT...GGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGTTTCTGGGACTTCTTaGCTTTCTTCATTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: WRWPRGRGFHEGDLSQPPVSGTS*LSSFAL
Trigger: TAAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAAC...TGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCTCCTGGAAGCATCCTGTTTCTaGGACTTCTTGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RGFHEGDLSQPPEVGSLLEASCF*DFLAFF
Trigger: GAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTC...CAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGTCATGGTTGGGGCCTTaGCATCTTCTTGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQSWLGP*HLLDCW
Trigger: CCAGCAATCAAGAAGATGCCAAGGCCCCAACCATGA...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGAACACATACTTGAGCTaGGAGACGAGGACTTGCACA +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQNTYLS*ETRTCT
Trigger: TGTGCAAGTCCTCGTCTCTCAGCTCAAGTATGTGTT...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGTGCCAAACACATACTTaGGCTGAGAGACGAGGACTT +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQCQTHT*AERRGL
Trigger: AAGTCCTCGTCTCTCAGCTCAAGTATGTGTTTGGCA...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCGACGTCATTGCTTTTaGCGTCTTCCAAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQRRHCF*RLPSWC
Trigger: ACACCAACTTGGAAGACGTCAAAAGCAATGACGTCG...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TGGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCCTATGGAAGCCTGGCTaGGGCAGGCCCAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: WTDKFIPKAVFPHQLLFSLWKPG*GRPRDF
Trigger: GAAGTCCCTGGGCCTGCCTCAGCCAGGCTTCCATAG...GCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGCAGGATTGTGGCCACAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTTTCTTCTAGCTGCTCCTaGTTCAGCAATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRIVATKVTSQISRSTLFSSSCS*FSNGLS
Trigger: GGAAAGGCCATTGCTGAACCAGGAGCAGCTAGAAGA...AAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTGTGGCCACAATCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 72 bp ACTGAACTTGGGAGTCCCAGGGCATCCATCCATGAATaGTATGTGCAGGTACATGGAATGGAGTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TELGSPRASIHE*YVQVHGMESQV
Trigger: CACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACTCCCAAGTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp GGCAGGTCTCGGAAGAGTTCCCCAAGTTTGACGATAATAAGAAGGATAAAAAGGGCGGACCAGAGGCTCTaGCAGGTAGGTGACAACGAA +
Preference number: 4 (lower is better)
Translates to: GRSRKSSPSLTIIRRIKRADQRL*QVGDNE
Trigger: TTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGC...CCTTTTTATCCTTCTTATTATCGTCAAACTTGGGGAACTCTTCCGAGACCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS-3UTR TCA 90 bp ATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAAAGAGAGCAGATGTCTaGGAACTGCTTCATCATGCC +
Preference number: 4 (lower is better)
Translates to: IPKAVFPHQLLFSTQPRPKRADV*ELLHHA
Trigger: GGCATGATGAAGCAGTTCTCAGACATCTGCTCTCTT...TGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTGGCACCTGGAGCGACGTCATTGCTTTTaGCGTCTTCCAAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SMNCMCRYMEWSPRWHLERRHCF*RLPSWC
Trigger: ACACCAACTTGGAAGACGTCAAAAGCAATGACGTCG...CTCCAGGTGCCACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp GACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCTGGAGACTACATCCTaGAGCTCCTCCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: DKFIPKAVFPHQLLFSTQLETTS*SSSPWC
Trigger: GCACCAAGGGGAGGAGCTTCAGGATGTAGTCTCCAG...CTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCTCCTGACAGAGGCAAAGACATaGTGCTTAGTGATAGATTCA +
Preference number: 4 (lower is better)
Translates to: RGFHEGDLSQPPEVGSLLTEAKT*CLVIDS
Trigger: TGAATCTATCACTAAGCAGCATGTCTTTGCCTCTGT...CAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCTCTTCTAGCTGCTCCTaGTTCAGCAATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SPRASIHELYVQVHGMESSSSCS*FSNGLS
Trigger: GGAAAGGCCATTGCTGAACCAGGAGCAGCTAGAAGA...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000188557.8
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGATTCGTTTCTTCTTCTaGGTGATGAGGCGGTCAACA +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQIRFFF*VMRRST
Trigger: TGTTGACCGCCTCATCACCCAGAAGAAGAAACGAAT...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp AGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTGTTTCTGGGACTTCTTaGCTTTCTTCATTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: RGRGFHEGDLSQPPEVGSVSGTS*LSSFAL
Trigger: TAAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAAC...ACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
3UTR CAA 72 bp CAAAGGTCACCAGCCAGATTAGCAGGTCCACTCTGTTaGCCTTCCAAAGAGAGCAGATGTCTGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: QRSPARLAGPLC*PSKESRCLRTA
Trigger: AGCAGTTCTCAGACATCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCTGCTAATCTGGCTGGTGACCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
3UTR CAA 72 bp GAGCCCTCGACGTCATTGCTTTTGACGTCTTCCAAGTaGGTGTTGACGTTGACGGAAACTGAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: EPSTSLLLTSSK*VLTLTETEEIL
Trigger: CAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGAGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
CDS-3UTR TCA 90 bp AGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCGGACCAGAGGCTCTaGCAGGTAGGTGACAACGAA +
Preference number: 4 (lower is better)
Translates to: RQIYSQSCIPTSAPFQHPADQRL*QVGDNE
Trigger: TTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGC...TGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGTCATCTCCTGCTTTTTaGTTCGTTTCTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQSSPAF*FVSSSG
Trigger: CCCAGAAGAAGAAACGAATCAAAAAGCAGGAGATGA...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTCCACTCTGTTTaGCTTCCAAAGAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SPRASIHELYVQVHGMESQVHSV*LPKRAD
Trigger: ATCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCTG...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR TCA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTCATCTCCTGCTTTTTaGTTCGTTTCTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRSSPAF*FVSSSG
Trigger: CCCAGAAGAAGAAACGAATCAAAAAGCAGGAGATGA...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCGGCCCCAGAGTATTCTaGCACGTCTCTATAAATATC +
Preference number: 4 (lower is better)
Translates to: SPRASIHELYVQVHGMESGPRVF*HVSINI
Trigger: GATATTTATAGAGACGTGGCAGAATACTCTGGGGCC...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTGGCATCTTCTTGATTaGTGGAGACTACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRWHLLD*WRLHPE
Trigger: TTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCA...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp ATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCATGGCATCTTCTTGATTaGTGGAGACTACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: IPKAVFPHQLLFSTQPRPWHLLD*WRLHPE
Trigger: TTCAGGATGTAGTCTCCAGCAATCAAGAAGATGCCA...TGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGGAGGCAAAGACATGCTaGTTAGTGATAGATTCATCA +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQEAKTC*LVIDSS
Trigger: TGATGAATCTATCACTAAGCAGCATGTCTTTGCCTC...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCAGTGAGATGGCAATaGCGAAGCCCACCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GQTNLFPKLYSHISSFSAPVRWQ*RSPPQQ
Trigger: TTGCTGTGGTGGGCTTCGCCATTGCCATCTCACTGG...TGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGAAACTGAGGAGATCTTaGAAGAAGCATCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQKLRRS*KKHPVS
Trigger: AGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTT...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR GCA 90 bp CCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGAGGCAAAGACATGCTaGTTAGTGATAGATTCATCA +
Preference number: 4 (lower is better)
Translates to: PRASIHELYVQVHGMESQEAKTC*LVIDSS
Trigger: TGATGAATCTATCACTAAGCAGCATGTCTTTGCCTC...CTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp GACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGATAAATATCCGTATCTaGCACCTGCCCCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: DKFIPKAVFPHQLLFSTQINIRI*HLPQDG
Trigger: TCCGTCCTGGGGCAGGTGCCAGATACGGATATTTAT...CTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
CDS-3UTR CCA 90 bp TGGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCTGGCGAAGTACAGCGTaGCTGAGGAACGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: WTDKFIPKAVFPHQLLFSWRSTA*LRNGRL
Trigger: AAGTCTTCCGTTCCTCAGCCACGCTGTACTTCGCCA...GCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
3UTR CAA 72 bp AAGTTGGTGTTGACGTTGACGGAAACTGAGGAGATCTaGGAAGAAGCATCCTGTTTCTGGGACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KLVLTLTETEEI*EEASCFWDFLA
Trigger: AGCCAAGAAGTCCCAGAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 72 bp TCATTGCTTTTGACGTCTTCCAAGTTGGTGTTGACGTaGACGGAAACTGAGGAGATCTTGGAAGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: SLLLTSSKLVLT*TETEEILEEAS
Trigger: GGATGCTTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 72 bp TCGACGTCATTGCTTTTGACGTCTTCCAAGTTGGTGTaGACGTTGACGGAAACTGAGGAGATCTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: STSLLLTSSKLV*TLTETEEILEE
Trigger: TTCTTCCAAGATCTCCTCAGTTTCCGTCAACGTCAACACCAACTTGGAAGACGTCAAAAGCAATGACGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
3UTR CAA 72 bp GAGATCTTGGAAGAAGCATCCTGTTTCTGGGACTTCTaGGCTTTCTTCATTCGCTTTAACTTCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EILEEASCFWDF*AFFIRFNFISC
Trigger: GCAGGAGATGAAGTTAAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAACAGGATGCTTCTTCCAAGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193874.3
CDS-3UTR GCA 90 bp AGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGGCCCCAGAGTATTCTaGCACGTCTCTATAAATATC +
Preference number: 4 (lower is better)
Translates to: RQIYSQSCIPTSAPFQHPGPRVF*HVSINI
Trigger: GATATTTATAGAGACGTGGCAGAATACTCTGGGGCC...TGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
CDS CCA 90 bp CGGGGTAACCAGCCCAGGACTGGAACGTGCTGGAGCAGAAGAGAATaGGCCCGAGCACGGGAGCATCGGAACCAAGTTCGCCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: RGNQPRTGTCWSRRE*ARAREHRNQVRHWW
Trigger: CCACCAGTGGCGAACTTGGTTCCGATGCTCCCGTGCTCGGGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCTGGGCTGGTTACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp TGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAACACCCGGGACCTCCTaGGCCCCAGAGTATTCTGCC +
Preference number: 5 (lower is better)
Translates to: WRWPRGRGFHEGDLSQPPTPGTS*APEYSA
Trigger: GGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGT...TGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCACCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS GCA 90 bp CGGAACCAAGTTCGCCACTGGTGGGTCTTCGCCGCTGGGCCCCAATaGCCCAGATCTTCTAGCTGCTCCTGGTTCAGCAATGGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RNQVRHWWVFAAGPQ*PRSSSCSWFSNGLS
Trigger: GGAAAGGCCATTGCTGAACCAGGAGCAGCTAGAAGATCTGGGGCATTGGGGCCCAGCGGCGAAGACCCACCAGTGGCGAACTTGGTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS GCA 90 bp CATTCACGCACAGGATACCGGGGTAACCAGCCCAGGACTGGAACGTaGTGGAGCAGAAGAGAATGGGCCCGAGCACGGGAGCATCGGAAC +
Preference number: 5 (lower is better)
Translates to: HSRTGYRGNQPRTGT*WSRREWARAREHRN
Trigger: GTTCCGATGCTCCCGTGCTCGGGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCTGGGCTGGTTACCCCGGTATCCTGTGCGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS CCA 90 bp TCACGCACAGGATACCGGGGTAACCAGCCCAGGACTGGAACGTGCTaGAGCAGAAGAGAATGGGCCCGAGCACGGGAGCATCGGAACCAA +
Preference number: 5 (lower is better)
Translates to: SRTGYRGNQPRTGTC*SRREWARAREHRNQ
Trigger: TTGGTTCCGATGCTCCCGTGCTCGGGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCTGGGCTGGTTACCCCGGTATCCTGTGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS TCA 90 bp ATGCAGCCGTGGTATAGCTGCGGACCAGAGGCTCTGACAGGTAGGTaGCAACGAAGCCGAAGTGTACCAGGCCCAGCCCCACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: MQPWYSCGPEALTGR*QRSRSVPGPAPPGR
Trigger: TCTTCCAGGTGGGGCTGGGCCTGGTACACTTCGGCTTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGCAGCTATACCACGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCACTGAAGCTCCTCCCCTaGGTGCACCTTGGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPLKLLP*VHLGLR
Trigger: TCTGAGGCCAAGGTGCACCAAGGGGAGGAGCTTCAG...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS GCA 90 bp GTAGTCTCTCCTCTGCAGCTCCATTTCTTGGGCTGCAGACAGGAGTaGCTGCGTCTGATGTGTCCCTTGGTCGGACCCATCGGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: VVSPLQLHFLGCRQE*LRLMCPLVGPIGKS
Trigger: GGACTTCCCGATGGGTCCGACCAAGGGACACATCAGACGCAGGCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCAGAGGAGAGACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
CDS-3UTR CAA 90 bp TGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTACTGCAGCTCCATTTCTaGGGCTGCAGACAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: WPRGRGFHEGDLSQPPEVLQLHF*GCRQEC
Trigger: GCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCAG...TACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188557.8
CDS-3UTR CAA 90 bp GGAATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGCCCACCACATCGACCTaGAATCTGTCATTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GMESQVAPGGGPEAGGFMPTTST*NLSFSF
Trigger: GAAGCTGAATGACAGATTCAAGGTCGATGTGGTGGG...CATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp CTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCAGGGCCAGGTTCAGCAGGATaGTGGCCACAAAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: LTAIPCPRPVALNLGVPGPGSAG*WPQRSP
Trigger: TGGTGACCTTTGTGGCCACAATCCTGCTGAACCTGG...CCCTGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp TGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCATCAGTGAGGTCATGGTaGGGGCCTTGGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: WRWPRGRGFHEGDLSQPPSVRSW*GPWHLL
Trigger: AAGAAGATGCCAAGGCCCCAACCATGACCTCACTGA...TGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCACCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp CCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCCCCAGGTTCAGCAGGATaGTGGCCACAAAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: PKAVFPHQLLFSTQPRPAPGSAG*WPQRSP
Trigger: TGGTGACCTTTGTGGCCACAATCCTGCTGAACCTGG...GGCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp AATGGAGTCCCAGGTGGCACCTGGAGGTGGCCCAGAGGCAGGGGGTTTCATGAGGAAACTGAGGAGATCTaGGAAGAAGCATCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NGVPGGTWRWPRGRGFHEETEEI*EEASCF
Trigger: GAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTC...CTCATGAAACCCCCTGCCTCTGGGCCACCTCCAGGTGCCACCTGGGACTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp AGCAATGGCAAAGGCATTTCCCACAAGCGTTGCAAACAGCTCTGTCTTGGGTGCCTGCAGCTCCATTTCTaGGGCTGCAGACAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SNGKGISHKRCKQLCLGCLQLHF*GCRQEC
Trigger: GCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCAG...GCACCCAAGACAGAGCTGTTTGCAACGCTTGTGGGAAATGCCTTTGCCATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192559.7
CDS-3UTR CAA 90 bp AGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTAGGCAGTCTCCTGCCCACCACATCGACCTaGAATCTGTCATTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RGFHEGDLSQPPEVGSLLPTTST*NLSFSF
Trigger: GAAGCTGAATGACAGATTCAAGGTCGATGTGGTGGG...CAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp AGTCCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCTGAAGCTCCTCCCCTaGGTGCACCTTGGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SPRASIHELYVQVHGMESLKLLP*VHLGLR
Trigger: TCTGAGGCCAAGGTGCACCAAGGGGAGGAGCTTCAG...GGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp TCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCGGCCTTGGCATCTTCTaGATTGCTGGAGACTACATC +
Preference number: 5 (lower is better)
Translates to: SQSCIPTSAPFQHPAKASGLGIF*IAGDYI
Trigger: GATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCC...GCTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS CCA 90 bp AGGGAGCTGGGCACAGACCTCCAGCACTGTATAGATAACGGACAGTaGCCCAGAGTGACTGCTGAGTTTGATGCCAAACACATACTTGAG +
Preference number: 5 (lower is better)
Translates to: RELGTDLQHCIDNGQ*PRVTAEFDAKHILE
Trigger: CTCAAGTATGTGTTTGGCATCAAACTCAGCAGTCACTCTGGGCCACTGTCCGTTATCTATACAGTGCTGGAGGTCTGTGCCCAGCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp ATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGCAGGTCCACTCTGTTaGCCTTCCAAAGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: IPKAVFPHQLLFSTQPRPAGPLC*PSKESR
Trigger: TCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCTGC...TGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp TCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTGGCACCTGGAGGCAGGTCCACTCTGTTaGCCTTCCAAAGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SMNCMCRYMEWSPRWHLEAGPLC*PSKESR
Trigger: TCTGCTCTCTTTGGAAGGCAAACAGAGTGGACCTGC...CTCCAGGTGCCACCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp TGGCCCAGAGGCAGGGGGTTTCATGAGGGTGACCTGTCACAACCTCCAGAGGTATGTTTCTGGGACTTCTaGGCTTTCTTCATTCGCTTT +
Preference number: 5 (lower is better)
Translates to: WPRGRGFHEGDLSQPPEVCFWDF*AFFIRF
Trigger: AAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAACA...TACCTCTGGAGGTTGTGACAGGTCACCCTCATGAAACCCCCTGCCTCTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCATGTTTCTGGGACTTCTaGGCTTTCTTCATTCGCTTT +
Preference number: 5 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPCFWDF*AFFIRF
Trigger: AAAGCGAATGAAGAAAGCCAAGAAGTCCCAGAAACA...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGTCAGTGAGGTCATGGTaGGGGCCTTGGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRSVRSW*GPWHLL
Trigger: AAGAAGATGCCAAGGCCCCAACCATGACCTCACTGA...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS GCA 90 bp AGCCTTGCACGAAGGCCTTATCTGCTGTCAGAGATTCTGTCACACTaGCCACCATCACAGACATTACAGCAAAGGTCCCCACAGAGATGT +
Preference number: 5 (lower is better)
Translates to: SLARRPYLLSEILSH*PPSQTLQQRSPQRC
Trigger: ACATCTCTGTGGGGACCTTTGCTGTAATGTCTGTGATGGTGGGCAGTGTGACAGAATCTCTGACAGCAGATAAGGCCTTCGTGCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp GGACAGACAAATTTATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCAACACCCGGGACCTCCTaGGCCCCAGAGTATTCTGCC +
Preference number: 5 (lower is better)
Translates to: GQTNLFPKLYSHISSFSATPGTS*APEYSA
Trigger: GGCAGAATACTCTGGGGCCAAGGAGGTCCCGGGTGT...TGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAATAAATTTGTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp AGCCTGACTGCAATACCCTGCCCCAGGCCTGTAGCACTGAACTTGGGAGTCCCATTCATCTCCTGCTTTTaGATTCGTTTCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SLTAIPCPRPVALNLGVPFISCF*IRFFFW
Trigger: CCAGAAGAAGAAACGAATCAAAAAGCAGGAGATGAA...TGGGACTCCCAAGTTCAGTGCTACAGGCCTGGGGCAGGGTATTGCAGTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp CCCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGGCCTTGGCATCTTCTaGATTGCTGGAGACTACATC +
Preference number: 5 (lower is better)
Translates to: PRASIHELYVQVHGMESQGLGIF*IAGDYI
Trigger: GATGTAGTCTCCAGCAATCAAGAAGATGCCAAGGCC...CTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS GCA 90 bp TGCATCATCAGCTGTGGCATTCAAGCCTTGCACGAAGGCCTTATCTaGTGTCAGAGATTCTGTCACACTGCCCACCATCACAGACATTAC +
Preference number: 5 (lower is better)
Translates to: CIISCGIQALHEGLI*CQRFCHTAHHHRHY
Trigger: GTAATGTCTGTGATGGTGGGCAGTGTGACAGAATCTCTGACAGCAGATAAGGCCTTCGTGCAAGGCTTGAATGCCACAGCTGATGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp CCAGGGCATCCATCCATGAATTGTATGTGCAGGTACATGGAATGGAGTCCCAGGGAAACTGAGGAGATCTaGGAAGAAGCATCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: PGHPSMNCMCRYMEWSPRETEEI*EEASCF
Trigger: GAAACAGGATGCTTCTTCCAAGATCTCCTCAGTTTC...CCTGGGACTCCATTCCATGTACCTGCACATACAATTCATGGATGGATGCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp TTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCAGAAGAGTTCCCCAAGTTaGACGATAATAAGAAGGATA +
Preference number: 5 (lower is better)
Translates to: FPKLYSHISSFSAPSQGQKSSPS*TIIRRI
Trigger: TATCCTTCTTATTATCGTCAAACTTGGGGAACTCTT...CTGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS-3UTR CAA 90 bp ATTCCCAAAGCTGTATTCCCACATCAGCTCCTTTTCAGCACCCAGCCAAGGCCATTCATCTCCTGCTTTTaGATTCGTTTCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: IPKAVFPHQLLFSTQPRPFISCF*IRFFFW
Trigger: CCAGAAGAAGAAACGAATCAAAAAGCAGGAGATGAA...TGGCCTTGGCTGGGTGCTGAAAAGGAGCTGATGTGGGAATACAGCTTTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS CCA 72 bp CAGCCCAGGACTGGAACGTGCTGGAGCAGAAGAGAATaGGCCCGAGCACGGGAGCATCGGAACCAAGTTCGC +
Preference number: 6 (lower is better)
Translates to: QPRTGTCWSRRE*ARAREHRNQVR
Trigger: GCGAACTTGGTTCCGATGCTCCCGTGCTCGGGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS CCA 72 bp GGATACCGGGGTAACCAGCCCAGGACTGGAACGTGCTaGAGCAGAAGAGAATGGGCCCGAGCACGGGAGCAT +
Preference number: 6 (lower is better)
Translates to: GYRGNQPRTGTC*SRREWARAREH
Trigger: ATGCTCCCGTGCTCGGGCCCATTCTCTTCTGCTCCAGCACGTTCCAGTCCTGGGCTGGTTACCCCGGTATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS GCA 72 bp GTTCGCCACTGGTGGGTCTTCGCCGCTGGGCCCCAATaGCCCAGATCTTCTAGCTGCTCCTGGTTCAGCAAT +
Preference number: 6 (lower is better)
Translates to: VRHWWVFAAGPQ*PRSSSCSWFSN
Trigger: ATTGCTGAACCAGGAGCAGCTAGAAGATCTGGGGCATTGGGGCCCAGCGGCGAAGACCCACCAGTGGCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS TCA 72 bp TGGTATAGCTGCGGACCAGAGGCTCTGACAGGTAGGTaGCAACGAAGCCGAAGTGTACCAGGCCCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: WYSCGPEALTGR*QRSRSVPGPAP
Trigger: TGGGGCTGGGCCTGGTACACTTCGGCTTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGCAGCTATACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS TCA 72 bp GTCTCAGGGAGCTGGGCACAGACCTCCAGCACTGTTTaGGCTGAGAGACGAGGACTTGCACAGATGCAGCCG +
Preference number: 6 (lower is better)
Translates to: VSGSWAQTSSTV*AERRGLAQMQP
Trigger: CGGCTGCATCTGTGCAAGTCCTCGTCTCTCAGCTCAAACAGTGCTGGAGGTCTGTGCCCAGCTCCCTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS GCA 72 bp CCTCTGCAGCTCCATTTCTTGGGCTGCAGACAGGAGTaGCTGCGTCTGATGTGTCCCTTGGTCGGACCCATC +
Preference number: 6 (lower is better)
Translates to: PLQLHFLGCRQE*LRLMCPLVGPI
Trigger: GATGGGTCCGACCAAGGGACACATCAGACGCAGGCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
CDS TCA 72 bp AGATGCAGCCGTGGTATAGCTGCGGACCAGAGGCTCTaGCAGGTAGGTGACAACGAAGCCGAAGTGTACCAG +
Preference number: 6 (lower is better)
Translates to: RCSRGIAADQRL*QVGDNEAEVYQ
Trigger: CTGGTACACTTCGGCTTCGTTGTCACCTACCTGTCAGAGCCTCTGGTCCGCAGCTATACCACGGCTGCATCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS CAA 72 bp AGACCTCCAGCACTGTTTGAGCTGAGAGACGAGGACTaGCACAGATGCAGCCGTGGTATAGCTGCGGACCAG +
Preference number: 6 (lower is better)
Translates to: RPPALFELRDED*HRCSRGIAADQ
Trigger: CTGGTCCGCAGCTATACCACGGCTGCATCTGTGCAAGTCCTCGTCTCTCAGCTCAAACAGTGCTGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000192559.7
ENSMUST00000193874.3
CDS GCA 72 bp ATGGTAGTCTCTCCTCTGCAGCTCCATTTCTTGGGCTaGAGACAGGAGTGCCTGCGTCTGATGTGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: MVVSPLQLHFLG*RQECLRLMCPL
Trigger: CAAGGGACACATCAGACGCAGGCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCAGAGGAGAGACTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
CDS GCA 72 bp AGTAGTTCCCCAGGGATGGGCAGGGGCAGACGCCGATaGAGCTTCTCATTAAGTAGCTTCACCAGTACCAAG +
Preference number: 6 (lower is better)
Translates to: SSSPGMGRGRRR*SFSLSSFTSTK
Trigger: CTTGGTACTGGTGAAGCTACTTAATGAGAAGCTGCATCGGCGTCTGCCCCTGCCCATCCCTGGGGAACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS CAA 72 bp TTCCACATGGTAGTCTCTCCTCTGCAGCTCCATTTCTaGGGCTGCAGACAGGAGTGCCTGCGTCTGATGTGT +
Preference number: 6 (lower is better)
Translates to: FHMVVSPLQLHF*GCRQECLRLMC
Trigger: ACACATCAGACGCAGGCACTCCTGTCTGCAGCCCAAGAAATGGAGCTGCAGAGGAGAGACTACCATGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
CDS CAA 72 bp GATGCCAAACACATACTTGAGCTGAGAGACGAGGACTaGCACAGATGCAGCCGTGGTATAGCTGCGGACCAG +
Preference number: 6 (lower is better)
Translates to: DAKHILELRDED*HRCSRGIAADQ
Trigger: CTGGTCCGCAGCTATACCACGGCTGCATCTGTGCAAGTCCTCGTCTCTCAGCTCAAGTATGTGTTTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1
CDS GCA 72 bp AGCTGTGGCATTCAAGCCTTGCACGAAGGCCTTATCTaGTGTCAGAGATTCTGTCACACTGCCCACCATCAC +
Preference number: 6 (lower is better)
Translates to: SCGIQALHEGLI*CQRFCHTAHHH
Trigger: GTGATGGTGGGCAGTGTGACAGAATCTCTGACAGCAGATAAGGCCTTCGTGCAAGGCTTGAATGCCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000188557.8
ENSMUST00000192559.7
ENSMUST00000193874.3
ENSMUST00000239562.1
CDS CCA 72 bp GGCACAGACCTCCAGCACTGTATAGATAACGGACAGTaGCCCAGAGTGACTGCTGAGTTTGATGCCAAACAC +
Preference number: 6 (lower is better)
Translates to: GTDLQHCIDNGQ*PRVTAEFDAKH
Trigger: GTGTTTGGCATCAAACTCAGCAGTCACTCTGGGCCACTGTCCGTTATCTATACAGTGCTGGAGGTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000188557.8
ENSMUST00000239562.1