Pregenerated sensors for SLC26A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020651Ensembl transcript IDs: ENSMUST00000001253.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTaGTTAGTCCTTCCTAACTCACCTGCCCATAGAAGCTGTTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: WSTQHMDFRVSQESL*LVLPNSPAHRSCWA Trigger: GGCCCAACAGCTTCTATGGGCAGGTGAGTTAGGAAGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR GCA 90 bp | ACTGTATTATATTTCAACGTAACAGTAAGCGGATGGCTGCTGAAGTaGAAAGAAACAGTCAGTGCAGAAAACACTTGCAGAGACTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TVLYFNVTVSGWLLK*KETVSAENTCRDWA Trigger: AGCCCAGTCTCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTTACTGTTACGTTGAAATATAATACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR CAA 90 bp | ACAGAGACAGATGGAACCCTTATGGGCTCAGACAGCAAACCTGCTTaGGCATCCAGCACACAGTGTGTCACAGCAGCACATAGTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TETDGTLMGSDSKPA*ASSTQCVTAAHSES Trigger: TGACTCACTATGTGCTGCTGTGACACACTGTGTGCTGGATGCCAAAGCAGGTTTGCTGTCTGAGCCCATAAGGGTTCCATCTGTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGAGTGCAGAAAACACTTaGAGAGACTGGGCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: PGFGYFAAKLLVSALKHQSAENT*RDWADS Trigger: GCTGTCAGCCCAGTCTCTGCAAGTGTTTTCTGCACT...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTGGATGGCTGCTGAAGTaGAAAGAAACAGTCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VNTTHGFQSQSGISVISPGWLLK*KETVSA Trigger: TGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCC...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGCAAAGAAACAGTCAGTaGAGAAAACACTTGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGFGYFAAKLLVSALKHQQRNSQ*RKHLQR Trigger: TCTCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTG...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR CCA 72 bp | ATGGAACCCTTATGGGCTCAGACAGCAAACCTGCTTTaGCATCCAGCACACAGTGTGTCACAGCAGCACATA | + |
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Preference number: 3 (lower is better) Translates to: MEPLWAQTANLL*HPAHSVSQQHI Trigger: TATGTGCTGCTGTGACACACTGTGTGCTGGATGCCAAAGCAGGTTTGCTGTCTGAGCCCATAAGGGTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR GCA 72 bp | CTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTaGAGAGACTGGGCTGACAGCCAGGTTCTGTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: LKCKETVSAENT*RDWADSQVLSS Trigger: GCTAGACAGAACCTGGCTGTCAGCCCAGTCTCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR CCA 72 bp | TTAGTCCTTCCTAACTCACCTGCCCATAGAAGCTGTTaGGCCAGCCTAACAGAGACAGATGGAACCCTTATG | + |
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Preference number: 3 (lower is better) Translates to: LVLPNSPAHRSC*ASLTETDGTLM Trigger: CATAAGGGTTCCATCTGTCTCTGTTAGGCTGGCCCAACAGCTTCTATGGGCAGGTGAGTTAGGAAGGACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR GCA 72 bp | TATTTCAACGTAACAGTAAGCGGATGGCTGCTGAAGTaGAAAGAAACAGTCAGTGCAGAAAACACTTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: YFNVTVSGWLLK*KETVSAENTCR Trigger: TCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTTACTGTTACGTTGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR CCA 72 bp | GCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTaGTGCCTAAGAAGCTTCAGACTGTATTATATTTCA | + |
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Preference number: 3 (lower is better) Translates to: ALKHQKQQVFLV*CLRSFRLYYIS Trigger: TGAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGCGCCGCTCGCGCTGCTaGTGGAAGGCGAGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQRRSRC*WKASSL Trigger: CAGCGAGCTCGCCTTCCAGCAGCAGCGCGAGCGGCG...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGCGCTCGCGCTGCTGCTaGAAGGCGAGCTCGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQRSRCC*KASSLY Trigger: GTACAGCGAGCTCGCCTTCCAGCAGCAGCGCGAGCG...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTCTGTACTCGGCGAGCTaGGGCGGCTCCGACCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: VNTTHGFQSQSGISVISPLYSAS*GGSDLP Trigger: CGGCAGGTCGGAGCCGCCGCAGCTCGCCGAGTACAG...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTAGGCGCCGCTCGCGCTaGTGCTGGAAGGCGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RTLLILRANSPGFGYFAARRRSR*CWKASS Trigger: CGAGCTCGCCTTCCAGCAGCAGCGCGAGCGGCGCCT...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTGTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCTGTCCCGCAGCGTCCTaGGCTCAGGCAGGCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LLVSALKHQKQQVFLVWCCPAAS*AQAGAA Trigger: AGCGGCGCCTGCCTGAGCGCAGGACGCTGCGGGACA...GCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAACAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| 3UTR CAA 72 bp | GATGGAACCCTTATGGGCTCAGACAGCAAACCTGCTTaGGCATCCAGCACACAGTGTGTCACAGCAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: DGTLMGSDSKPA*ASSTQCVTAAH Trigger: ATGTGCTGCTGTGACACACTGTGTGCTGGATGCCAAAGCAGGTTTGCTGTCTGAGCCCATAAGGGTTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGGCCAAGACTGACTTCTaGAAGGGTTCCAGAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQAKTDF*KGSRSL Trigger: GAGGCTTCTGGAACCCTTGCAGAAGTCAGTCTTGGC...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGTGTGAGACCAGTACTTaGAAGGCTGCAGCGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQCETST*KAAAVV Trigger: CACAACCGCTGCAGCCTTCCAAGTACTGGTCTCACA...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGGGTCATCTGGAGCCATaGTCAGAACAACAGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQGHLEP*SEQQIP Trigger: TGGGATCTGTTGTTCTGAGCATGGCTCCAGATGACC...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | ATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGAGACTGAAACAGGCCCACAGATaGCAGGACAGGAGGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: MAAEVQRNSQCRKHLQRLKQAHR*QDRRQE Trigger: TTCTTGCCTCCTGTCCTGCCATCTGTGGGCCTGTTT...CAGTCTCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGCAGCCATACAGACGATaGTGGTCAGCAGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQQPYRR*WSAAQR Trigger: TCGCTGGGCTGCTGACCATCATCGTCTGTATGGCTG...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTGTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCGCGACACCGTGTAACTaGAGCTGTACTCGGCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLVSALKHQKQQVFLVWCATPCN*SCTRRA Trigger: AGCTCGCCGAGTACAGCTGCAGTTACACGGTGTCGC...GCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAACAAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTTCCAGCACCAGGCTGTaGATTGGCACCTTTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: VNTTHGFQSQSGISVISPSSTRL*IGTFGT Trigger: TGTCCCAAAGGTGCCAATCCACAGCCTGGTGCTGGA...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTATCCCACCATTAAACTaGCCACGGGGAAAGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VNTTHGFQSQSGISVISPIPPLN*PRGKGQ Trigger: TTGGCCCTTTCCCCGTGGTCAGTTTAATGGTGGGAT...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTCATCACAATCACAGCTaGGATGAGGCCAGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: RTLLILRANSPGFGYFAAHHNHS*DEASHL Trigger: CAGGTGGCTGGCCTCATCTCAGCTGTGATTGTGATG...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGCTTTCAGGTTGGCAATaGCAACGGCCGCCAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQLSGWQ*QRPPRL Trigger: CAGTCTTGGCGGCCGTTGTCATTGCCAACCTGAAAG...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCTCACTGTGGTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGAACAGGTACTGCTaGCAGCAGGGCATAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FFSLWSTQHMDFRVSQESLNRYC*QQGISH Trigger: ATGGCTTATGCCCTGCTGGCAGCAGTACCTGTTCAG...AGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGACCACAGTGAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGCCTGGTTCCCATCGATaGCATAGTCATGCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQPGSHR*HSHAWW Trigger: CCACCAAGCATGACTATGTCATCGATGGGAACCAGG...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGAGACTGTTTTCCTACAGACACTaGAATAGCGTAAGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: MAAEVQRNSQCRKHLQRLFSYRH*NSVSHH Trigger: GTGGTGGCTTACGCTATTGCAGTGTCTGTAGGAAAA...CAGTCTCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCACTGTGGTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTTGTAGATGTCTGTGCTaGGGACACTTCCAAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FFSLWSTQHMDFRVSQESCRCLC*GHFQGH Trigger: ATGGCCTTGGAAGTGTCCCCAGCACAGACATCTACA...AGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGACCACAGTGAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCCAATCACAGCTGAGATaGGGCCAGCCACCTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFQSQLR*GQPPVS Trigger: AGACACAGGTGGCTGGCCTCATCTCAGCTGTGATTG...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGTTCCATGAAGGGAACTaGACTCTCAGGACCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQFHEGN*TLRTTV Trigger: GACTGTGGTCCTGAGAGTTCAGTTCCCTTCATGGAA...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCTCACTGTGGTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTGCATCAGTCTTATTCTaGTTCCACAGACGAGGAACG | + |
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Preference number: 4 (lower is better) Translates to: FFSLWSTQHMDFRVSQESASVLF*FHRRGT Trigger: CGTTCCTCGTCTGTGGAAGCAGAATAAGACTGATGC...AGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGACCACAGTGAGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGAGGAGCCAGTCCAGAATaGGCAGGAGAGTCTTTACCA | + |
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Preference number: 4 (lower is better) Translates to: VSALKHQKQQVFLVWCLRGASPE*AGESLP Trigger: TGGTAAAGACTCTCCTGCCCATTCTGGACTGGCTCC...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGTCTAGCAGGGAATCCTaGCCTTCTCTGGATTTGACC | + |
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Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQSSRES*PSLDLT Trigger: GGTCAAATCCAGAGAAGGCCAGGATTCCCTGCTAGA...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | ATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGAGACTGTTTTGGTTGAAACATTaGGCACGATCTTTAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MAAEVQRNSQCRKHLQRLFWLKH*ARSLAV Trigger: CACAGCTAAAGATCGTGCTCAATGTTTCAACCAAAA...CAGTCTCTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTTTATCCCAAAGGCAATaGATTCCTGGTTCCCATCGA | + |
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Preference number: 4 (lower is better) Translates to: VNTTHGFQSQSGISVISPLSQRQ*IPGSHR Trigger: TCGATGGGAACCAGGAATTCATTGCCTTTGGGATAA...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR TCA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGATCCAAGGCCATTCCATaGAGGGAACTGAACTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VSALKHQKQQVFLVWCLRSKAIP*RELNSQ Trigger: CTGAGAGTTCAGTTCCCTTCATGGAATGGCCTTGGA...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTGTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCGGAACGTCACACACCTaGATAAACATCCCTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLVSALKHQKQQVFLVWCGTSHT*INIPFR Trigger: CCTGAAAGGGATGTTTATGCAGGTGTGTGACGTTCC...GCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAACAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGACTTGACTCGGTATTTTaGGAGCCAGTCCAGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: VSALKHQKQQVFLVWCLRLDSVF*EPVQNG Trigger: CCCATTCTGGACTGGCTCCCAAAATACCGAGTCAAG...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGAGGCAAGAACCCACTTaGGATGGACTTAACAATGCC | + |
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Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQRQEPT*DGLNNA Trigger: GGCATTGTTAAGTCCATCCCAAGTGGGTTCTTGCCT...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGCTCAATTTCTTTGGTTaGGATATTAAGTTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQLNFFG*DIKFLW Trigger: CCAGAGGAACTTAATATCCCAACCAAAGAAATTGAG...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTTCTCTGGATTTGACCTaGTTCTGCAGATGGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: VNTTHGFQSQSGISVISPSLDLT*FCRWRI Trigger: AATCCTCCATCTGCAGAACCAGGTCAAATCCAGAGA...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR CCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGAAGCAAGTCTACGCATaGCCTCATCCTGAACATCGA | + |
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Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQKQVYA*PHPEHR Trigger: TCGATGTTCAGGATGAGGCCATGCGTAGACTTGCTT...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCGCCAACCAAGGGGTCTaGCAAGTACCTCACTATGAA | + |
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Preference number: 4 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFANQGV*QVPHYE Trigger: TTCATAGTGAGGTACTTGGCAGACCCCTTGGTTGGC...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS-3UTR GCA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGATTTTGTAGATGTCTGTaGTGGGGACACTTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSALKHQKQQVFLVWCLRFCRCL*WGHFQG Trigger: GCCTTGGAAGTGTCCCCAGCACAGACATCTACAAAA...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGTTCTGCATTCATCTCTaGCTCCATCAGATCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQFCIHL*LHQIKR Trigger: CCTCTTGATCTGATGGAGGCAGAGATGAATGCAGAA...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGAACATCGAGCTCTTCTaGATTCATCTCTGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGFGYFAAKLLVSALKHQNIELF*IHLCLH Trigger: ATGGAGGCAGAGATGAATGCAGAAGAGCTCGATGTT...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTGTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCAGTTCTTTTCCAAGTTaGCCCCATAGGAAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSALKHQKQQVFLVWCSSFPS*PHRKWQ Trigger: CTGCCATTTCCTATGGGGCCAACTTGGAAAAGAACT...GCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAACAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTACTATGAATCCAATCTaGAAACCTCCAAACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLILRANSPGFGYFAATMNPI*KPPNTS Trigger: GCTGGTGTTTGGAGGTTTGCAGATTGGATTCATAGT...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CCA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCAAGCCACCACAGCAATaGAAAAGGATGCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFKPPQQ*KRMQPT Trigger: TGTTGGCTGCATCCTTTTCCATTGCTGTGGTGGCTT...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGACATAGTCATGCTTGGTaGCGTAGACTTTTCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSALKHQKQQVFLVWCLRHSHAW*RRLFLQ Trigger: CTGTAGGAAAAGTCTACGCCACCAAGCATGACTATG...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR TCA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCCCAAGTACCTCACTATaGATCCAATCTGCAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFPSTSL*IQSANL Trigger: GAGGTTTGCAGATTGGATTCATAGTGAGGTACTTGG...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR TCA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTGTTGTAGTTTTTGGTTaGAACATTGAGCACGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNTTHGFQSQSGISVISPVVVFG*NIEHDL Trigger: AAGATCGTGCTCAATGTTTCAACCAAAAACTACAAC...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR TCA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTGAGTTCCAGTCCACTTaGATCTCAATTTCTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLILRANSPGFGYFAAEFQST*ISISLV Trigger: AACCAAAGAAATTGAGATTCAAGTGGACTGGAACTC...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CCA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCAAGAAAGTGGTCATCTaGAGCCATGCTCAGAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFKKVVI*SHAQNN Trigger: GTTGTTCTGAGCATGGCTCCAGATGACCACTTTCTT...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCTTCTCTGAAATTCTTTaGCAATCATTCGCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLVSALKHQKQQVFLVWCFSEIL*QSFAMT Trigger: GGTCATTGCGAATGATTGTCAAAGAATTTCAGAGAA...GCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAACAAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGAGATATTAAGTTCCTCTaGCTCTTCCACATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSALKHQKQQVFLVWCLRDIKFL*LFHIFI Trigger: GATGAAGATGTGGAAGAGCCAGAGGAACTTAATATC...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR TCA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCTCTAACACATCATCTTaGAGCAGAGCAAAGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFSNTSS*SRAKYT Trigger: TGTGTACTTTGCTCTGCTTCAAGATGATGTGTTAGA...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR GCA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTCTGTATTCTTCTCAGTaGTTTCAGCCTCTTATTATA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLILRANSPGFGYFAALYSSQ*FQPLII Trigger: TATAATAAGAGGCTGAAAGCACTGAGAAGAATACAG...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | GCTGGAAGGCGAGCTCGCTGTACACCGGCCGCGACACCGTGTAACTaGAGCTGTACTCGGCGAGCTGCGGCGGCTCCGACCTGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGRRARCTPAATPCN*SCTRRAAAAPTCRP Trigger: GGGGCGGCAGGTCGGAGCCGCCGCAGCTCGCCGAGTACAGCTGCAGTTACACGGTGTCGCGGCCGGTGTACAGCGAGCTCGCCTTCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | GATAGGGAAAAAGGCAGAGTAGAGACCGAACTGAACAGGTACTGCTaGCAGCAGGGCATAAGCCATCCCTTGCAGGGTACCCACCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DREKGRVETELNRYC*QQGISHPLQGTHQP Trigger: GGGCTGGTGGGTACCCTGCAAGGGATGGCTTATGCCCTGCTGGCAGCAGTACCTGTTCAGTTCGGTCTCTACTCTGCCTTTTTCCCTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | CAGGATAGGGAAAAAGGCAGAGTAGAGACCGAACTGAACAGGTACTaGTGCCAGCAGGGCATAAGCCATCCCTTGCAGGGTACCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDREKGRVETELNRY*CQQGISHPLQGTHQ Trigger: CTGGTGGGTACCCTGCAAGGGATGGCTTATGCCCTGCTGGCAGCAGTACCTGTTCAGTTCGGTCTCTACTCTGCCTTTTTCCCTATCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 90 bp | GGATACAGCTCCGCAATCCAGCACCAGGCTGTGGATTGGCACCTTTaGGACATTCACTTTCACCGGGAGTTCGGAGTTCCAGTCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GYSSAIQHQAVDWHL*DIHFHREFGVPVHL Trigger: CAAGTGGACTGGAACTCCGAACTCCCGGTGAAAGTGAATGTCCCAAAGGTGCCAATCCACAGCCTGGTGCTGGATTGCGGAGCTGTATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS TCA 90 bp | TGCGAGCGACCGTCTCTAGCAGGGAATCCTGGCCTTCTCTGGATTTaGCCTGGTTCTGCAGATGGAGGATTGCATCATGAACCGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CERPSLAGNPGLLWI*PGSADGGLHHEPSE Trigger: TTCTGACGGTTCATGATGCAATCCTCCATCTGCAGAACCAGGTCAAATCCAGAGAAGGCCAGGATTCCCTGCTAGAGACGGTCGCTCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | TCATCTCTGCCTCCATCAGATCAAGAGGGTCTTTACAGTCCCGAATaGGAGCGACCGTCTCTAGCAGGGAATCCTGGCCTTCTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SSLPPSDQEGLYSPE*ERPSLAGNPGLLWI Trigger: AATCCAGAGAAGGCCAGGATTCCCTGCTAGAGACGGTCGCTCGCATTCGGGACTGTAAAGACCCTCTTGATCTGATGGAGGCAGAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | TACAGACACTGCAATAGCGTAAGCCACCACAGCAATGGAAAAGGATaGAGCCAACATGTCCGAAAACAGGCCCACAGATGGCAGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: YRHCNSVSHHSNGKG*SQHVRKQAHRWQDR Trigger: CCTGTCCTGCCATCTGTGGGCCTGTTTTCGGACATGTTGGCTGCATCCTTTTCCATTGCTGTGGTGGCTTACGCTATTGCAGTGTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 90 bp | TTGGTTGAAACATTGAGCACGATCTTTAGCTGTGAGACCAGTACTTaGAAGGCTGCAGCGGTTGTGAATCCGCCAACCAAGGGGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVETLSTIFSCETST*KAAAVVNPPTKGSA Trigger: GGCAGACCCCTTGGTTGGCGGATTCACAACCGCTGCAGCCTTCCAAGTACTGGTCTCACAGCTAAAGATCGTGCTCAATGTTTCAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | TACTTGGAAGGCTGCAGCGGTTGTGAATCCGCCAACCAAGGGGTCTaGCAAGTACCTCACTATGAATCCAATCTGCAAACCTCCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: YLEGCSGCESANQGV*QVPHYESNLQTSKH Trigger: GTGTTTGGAGGTTTGCAGATTGGATTCATAGTGAGGTACTTGGCAGACCCCTTGGTTGGCGGATTCACAACCGCTGCAGCCTTCCAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 90 bp | TCCGGAGATGATGTCACTGAGGAGCCATTCCTTGACTCGGTATTTTaGGAGCCAGTCCAGAATGGGCAGGAGAGTCTTTACCACACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGDDVTEEPFLDSVF*EPVQNGQESLYHTK Trigger: TTTGGTGTGGTAAAGACTCTCCTGCCCATTCTGGACTGGCTCCCAAAATACCGAGTCAAGGAATGGCTCCTCAGTGACATCATCTCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 90 bp | TTCCAGTGTCTAACGTGGTCGAGTTCAATGCACTTCCGTTACCGCTaGGCACAAGAAAGTGGTCATCTGGAGCCATGCTCAGAACAACAG | + |
|
Preference number: 5 (lower is better) Translates to: FQCLTWSSSMHFRYR*AQESGHLEPCSEQQ Trigger: CTGTTGTTCTGAGCATGGCTCCAGATGACCACTTTCTTGTGCCCAGCGGTAACGGAAGTGCATTGAACTCGACCACGTTAGACACTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 90 bp | GTGGTCGAGTTCAATGCACTTCCGTTACCGCTGGGCACAAGAAAGTaGTCATCTGGAGCCATGCTCAGAACAACAGATCCCACCATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VVEFNALPLPLGTRK*SSGAMLRTTDPTIK Trigger: TTTAATGGTGGGATCTGTTGTTCTGAGCATGGCTCCAGATGACCACTTTCTTGTGCCCAGCGGTAACGGAAGTGCATTGAACTCGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGCTGAGGAGCCATTCCTaGACTCGGTATTTTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQLRSHS*TRYFGS Trigger: GCTCCCAAAATACCGAGTCAAGGAATGGCTCCTCAG...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | CCGCCAACCAAGGGGTCTGCCAAGTACCTCACTATGAATCCAATCTaGAAACCTCCAAACACCAGCTGTATGATTCCAACTAGAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPTKGSAKYLTMNPI*KPPNTSCMIPTRRV Trigger: CACTCTTCTAGTTGGAATCATACAGCTGGTGTTTGGAGGTTTGCAGATTGGATTCATAGTGAGGTACTTGGCAGACCCCTTGGTTGGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 90 bp | CGAAAACAGGCCCACAGATGGCAGGACAGGAGGCAAGAACCCACTTaGGATGGACTTAACAATGCCAGCATTGTAGTTCTTTTCCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RKQAHRWQDRRQEPT*DGLNNASIVVLFQV Trigger: AACTTGGAAAAGAACTACAATGCTGGCATTGTTAAGTCCATCCCAAGTGGGTTCTTGCCTCCTGTCCTGCCATCTGTGGGCCTGTTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 90 bp | GATGACATAGTCATGCTTGGTGGCGTAGACTTTTCCTACAGACACTaGAATAGCGTAAGCCACCACAGCAATGGAAAAGGATGCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DDIVMLGGVDFSYRH*NSVSHHSNGKGCSQ Trigger: TTGGCTGCATCCTTTTCCATTGCTGTGGTGGCTTACGCTATTGCAGTGTCTGTAGGAAAAGTCTACGCCACCAAGCATGACTATGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | AAGCGGATGGCTGCTGAAGTGCAAAGAAACAGTCAGTGCAGAAAACACTTGCAGTCTGCAGATGGAGGATaGCATCATGAACCGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KRMAAEVQRNSQCRKHLQSADGG*HHEPSE Trigger: TTCTGACGGTTCATGATGCAATCCTCCATCTGCAGA...CTGCAAGTGTTTTCTGCACTGACTGTTTCTTTGCACTTCAGCAGCCATCCGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGTTTTGGATATTTTGCAGCTAAGCTGCTTGTTTCTGCATTAAAGCATCAGGCACCAGGCTGTGGATaGGCACCTTTGGGACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFGYFAAKLLVSALKHQAPGCG*APLGHS Trigger: TGAATGTCCCAAAGGTGCCAATCCACAGCCTGGTGC...CTGATGCTTTAATGCAGAAACAAGCAGCTTAGCTGCAAAATATCCAAAACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAACATCCCTTTCAGGTaGGCAATGACAACGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSALKHQKQQVFLVWCLRNIPFR*AMTTAA Trigger: GGCGGCCGTTGTCATTGCCAACCTGAAAGGGATGTT...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | GTCAACACAACACATGGATTTCAGAGTCAGTCAGGAATCTCTGTGATTAGTCCTTGTGGATTGGCACCTTaGGGACATTCACTTTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VNTTHGFQSQSGISVISPCGLAP*GHSLSP Trigger: CGGTGAAAGTGAATGTCCCAAAGGTGCCAATCCACA...AGGACTAATCACAGAGATTCCTGACTGACTCTGAAATCCATGTGTTGTGTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCCAAAGGCTCTCTTTCTaGAGCAACTGCAGCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFQRLSF*SNCSSA Trigger: CGCGGAGCTGCAGTTGCTCAAGAAAGAGAGCCTTTG...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTAATCCAGAGAAGACGTaGCTTATCCCAAAGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RTLLILRANSPGFGYFAANPEKT*LIPKAM Trigger: CATTGCCTTTGGGATAAGCAACGTCTTCTCTGGATT...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAAGTGTTTCTTGTGTGGTGCCTAAGAAGCTTCAGACTGTATTATATTTCCTTATGATCCCGTTCTaGGTTGCCCTGAGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TTSVSCVVPKKLQTVLYFLMIPF*VALSCP Trigger: AGGACAACTCAGGGCAACCAAGAACGGGATCATAAG...GAAATATAATACAGTCTGAAGCTTCTTAGGCACCACACAAGAAACACTTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | CGAACATTGCTAATTCTCAGGGCTAATTCTCCTGGTTTTGGATATTTTGCAGCTCTGTCCTTTCTAATGTaGTCATCAAAGAACCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RTLLILRANSPGFGYFAALSFLM*SSKNPH Trigger: GTGTGGGTTCTTTGATGACAACATTAGAAAGGACAG...AGCTGCAAAATATCCAAAACCAGGAGAATTAGCCCTGAGAATTAGCAATGTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGAGGAGTTCCAGTCCACTaGAATCTCAATTTCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSALKHQKQQVFLVWCLRGVPVH*NLNFFG Trigger: ACCAAAGAAATTGAGATTCAAGTGGACTGGAACTCC...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGCATTAAAGCATCAGAAACAACAAGTGTTTCTTGTGTGGTGCCTAAGAGCTCGAAGGCATTATTaGATGAGCCAATATCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSALKHQKQQVFLVWCLRARRHY*MSQYHL Trigger: TAAGTGATATTGGCTCATCAAATAATGCCTTCGAGC...TCTTAGGCACCACACAAGAAACACTTGTTGTTTCTGATGCTTTAATGCAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 72 bp | CGCAGCGTCCTGCGCTCAGGCAGGCGCCGCTCGCGCTaGTGCTGGAAGGCGAGCTCGCTGTACACCGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSVLRSGRRRSR*CWKASSLYTGR Trigger: GCGGCCGGTGTACAGCGAGCTCGCCTTCCAGCAGCAGCGCGAGCGGCGCCTGCCTGAGCGCAGGACGCTGCG 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 72 bp | AGCGTCCTGCGCTCAGGCAGGCGCCGCTCGCGCTGCTaGTGGAAGGCGAGCTCGCTGTACACCGGCCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVLRSGRRRSRC*WKASSLYTGRD Trigger: GTCGCGGCCGGTGTACAGCGAGCTCGCCTTCCAGCAGCAGCGCGAGCGGCGCCTGCCTGAGCGCAGGACGCT 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 72 bp | AACTGCAGCTCCGCGCCAGGCTGTCCCGCAGCGTCCTaGGCTCAGGCAGGCGCCGCTCGCGCTGCTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NCSSAPGCPAAS*AQAGAARAAAG Trigger: TCCAGCAGCAGCGCGAGCGGCGCCTGCCTGAGCGCAGGACGCTGCGGGACAGCCTGGCGCGGAGCTGCAGTT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS CCA 72 bp | GTCCTGCGCTCAGGCAGGCGCCGCTCGCGCTGCTGCTaGAAGGCGAGCTCGCTGTACACCGGCCGCGACACC | + |
|
Preference number: 6 (lower is better) Translates to: VLRSGRRRSRCC*KASSLYTGRDT Trigger: GGTGTCGCGGCCGGTGTACAGCGAGCTCGCCTTCCAGCAGCAGCGCGAGCGGCGCCTGCCTGAGCGCAGGAC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 72 bp | CGAGCTCGCTGTACACCGGCCGCGACACCGTGTAACTaGAGCTGTACTCGGCGAGCTGCGGCGGCTCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: RARCTPAATPCN*SCTRRAAAAPT Trigger: GGTCGGAGCCGCCGCAGCTCGCCGAGTACAGCTGCAGTTACACGGTGTCGCGGCCGGTGTACAGCGAGCTCG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
||
| CDS GCA 72 bp | TCTTTACCACACCAAAGGCTCTCTTTCTTGAGCAACTaGAGCTCCGCGCCAGGCTGTCCCGCAGCGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPHQRLSFLSN*SSAPGCPAASC Trigger: GCAGGACGCTGCGGGACAGCCTGGCGCGGAGCTGCAGTTGCTCAAGAAAGAGAGCCTTTGGTGTGGTAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS TCA 72 bp | CAGGAGAGTCTTTACCACACCAAAGGCTCTCTTTCTTaGGCAACTGCAGCTCCGCGCCAGGCTGTCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QESLYHTKGSLS*ATAAPRQAVPQ Trigger: CTGCGGGACAGCCTGGCGCGGAGCTGCAGTTGCTCAAGAAAGAGAGCCTTTGGTGTGGTAAAGACTCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS TCA 72 bp | GCTGTGAGACCAGTACTTGGAAGGCTGCAGCGGTTGTaGATCCGCCAACCAAGGGGTCTGCCAAGTACCTCA | + |
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Preference number: 6 (lower is better) Translates to: AVRPVLGRLQRL*IRQPRGLPSTS Trigger: TGAGGTACTTGGCAGACCCCTTGGTTGGCGGATTCACAACCGCTGCAGCCTTCCAAGTACTGGTCTCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | GGATGCAGCCAACATGTCCGAAAACAGGCCCACAGATaGCAGGACAGGAGGCAAGAACCCACTTGGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: GCSQHVRKQAHR*QDRRQEPTWDG Trigger: TCCATCCCAAGTGGGTTCTTGCCTCCTGTCCTGCCATCTGTGGGCCTGTTTTCGGACATGTTGGCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | CCTCCATCAGATCAAGAGGGTCTTTACAGTCCCGAATaGGAGCGACCGTCTCTAGCAGGGAATCCTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PPSDQEGLYSPE*ERPSLAGNPGL Trigger: AAGGCCAGGATTCCCTGCTAGAGACGGTCGCTCGCATTCGGGACTGTAAAGACCCTCTTGATCTGATGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | TCCGCAATCCAGCACCAGGCTGTGGATTGGCACCTTTaGGACATTCACTTTCACCGGGAGTTCGGAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SAIQHQAVDWHL*DIHFHREFGVP Trigger: TGGAACTCCGAACTCCCGGTGAAAGTGAATGTCCCAAAGGTGCCAATCCACAGCCTGGTGCTGGATTGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | AGGAAGGATACAGCTCCGCAATCCAGCACCAGGCTGTaGATTGGCACCTTTGGGACATTCACTTTCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: RKDTAPQSSTRL*IGTFGTFTFTG Trigger: CCCGGTGAAAGTGAATGTCCCAAAGGTGCCAATCCACAGCCTGGTGCTGGATTGCGGAGCTGTATCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CAA 90 bp | AGCCCAGTGCTAACTCCGGAGATGATGTCACTGAGGAGCCATTCCTaGACTCGGTATTTTGGGAGCCAGTCCAGAATGGGCAGGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SPVLTPEMMSLRSHS*TRYFGSQSRMGRRV Trigger: GACTCTCCTGCCCATTCTGGACTGGCTCCCAAAATACCGAGTCAAGGAATGGCTCCTCAGTGACATCATCTCCGGAGTTAGCACTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CAA 90 bp | AGGATACAGCTCCGCAATCCAGCACCAGGCTGTGGATTGGCACCTTaGGGACATTCACTTTCACCGGGAGTTCGGAGTTCCAGTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: RIQLRNPAPGCGLAP*GHSLSPGVRSSSPL Trigger: AAGTGGACTGGAACTCCGAACTCCCGGTGAAAGTGAATGTCCCAAAGGTGCCAATCCACAGCCTGGTGCTGGATTGCGGAGCTGTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | GGCTGCAGCGGTTGTGAATCCGCCAACCAAGGGGTCTaGCAAGTACCTCACTATGAATCCAATCTGCAAACC | + |
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Preference number: 6 (lower is better) Translates to: GCSGCESANQGV*QVPHYESNLQT Trigger: GGTTTGCAGATTGGATTCATAGTGAGGTACTTGGCAGACCCCTTGGTTGGCGGATTCACAACCGCTGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CAA 72 bp | CTAACTCCGGAGATGATGTCACTGAGGAGCCATTCCTaGACTCGGTATTTTGGGAGCCAGTCCAGAATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LTPEMMSLRSHS*TRYFGSQSRMG Trigger: GCCCATTCTGGACTGGCTCCCAAAATACCGAGTCAAGGAATGGCTCCTCAGTGACATCATCTCCGGAGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS TCA 72 bp | GAGCCATGCTCAGAACAACAGATCCCACCATTAAACTaGCCACGGGGAAAGGGCCAACTGAGATGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: EPCSEQQIPPLN*PRGKGQLRCVL Trigger: CAAGACACATCTCAGTTGGCCCTTTCCCCGTGGTCAGTTTAATGGTGGGATCTGTTGTTCTGAGCATGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS TCA 72 bp | CCGTCTCTAGCAGGGAATCCTGGCCTTCTCTGGATTTaGCCTGGTTCTGCAGATGGAGGATTGCATCATGAA | + |
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Preference number: 6 (lower is better) Translates to: PSLAGNPGLLWI*PGSADGGLHHE Trigger: TTCATGATGCAATCCTCCATCTGCAGAACCAGGTCAAATCCAGAGAAGGCCAGGATTCCCTGCTAGAGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | TGCAATAGCGTAAGCCACCACAGCAATGGAAAAGGATaGAGCCAACATGTCCGAAAACAGGCCCACAGATGG | + |
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Preference number: 6 (lower is better) Translates to: CNSVSHHSNGKG*SQHVRKQAHRW Trigger: CCATCTGTGGGCCTGTTTTCGGACATGTTGGCTGCATCCTTTTCCATTGCTGTGGTGGCTTACGCTATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | TCTACGCATGGCCTCATCCTGAACATCGAGCTCTTCTaGATTCATCTCTGCCTCCATCAGATCAAGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: STHGLILNIELF*IHLCLHQIKRV Trigger: GACCCTCTTGATCTGATGGAGGCAGAGATGAATGCAGAAGAGCTCGATGTTCAGGATGAGGCCATGCGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | GATGTCACTGAGGAGCCATTCCTTGACTCGGTATTTTaGGAGCCAGTCCAGAATGGGCAGGAGAGTCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: DVTEEPFLDSVF*EPVQNGQESLY Trigger: GTAAAGACTCTCCTGCCCATTCTGGACTGGCTCCCAAAATACCGAGTCAAGGAATGGCTCCTCAGTGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | ACATTGAGCACGATCTTTAGCTGTGAGACCAGTACTTaGAAGGCTGCAGCGGTTGTGAATCCGCCAACCAAG | + |
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Preference number: 6 (lower is better) Translates to: TLSTIFSCETST*KAAAVVNPPTK Trigger: CTTGGTTGGCGGATTCACAACCGCTGCAGCCTTCCAAGTACTGGTCTCACAGCTAAAGATCGTGCTCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | GCCCACAGATGGCAGGACAGGAGGCAAGAACCCACTTaGGATGGACTTAACAATGCCAGCATTGTAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AHRWQDRRQEPT*DGLNNASIVVL Trigger: AAGAACTACAATGCTGGCATTGTTAAGTCCATCCCAAGTGGGTTCTTGCCTCCTGTCCTGCCATCTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS TCA 72 bp | ATCCGCCAACCAAGGGGTCTGCCAAGTACCTCACTATaGATCCAATCTGCAAACCTCCAAACACCAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: IRQPRGLPSTSL*IQSANLQTPAV Trigger: TACAGCTGGTGTTTGGAGGTTTGCAGATTGGATTCATAGTGAGGTACTTGGCAGACCCCTTGGTTGGCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | CTCATCCTGAACATCGAGCTCTTCTGCATTCATCTCTaGCTCCATCAGATCAAGAGGGTCTTTACAGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LILNIELFCIHL*LHQIKRVFTVP Trigger: CGGGACTGTAAAGACCCTCTTGATCTGATGGAGGCAGAGATGAATGCAGAAGAGCTCGATGTTCAGGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | GTCATGCTTGGTGGCGTAGACTTTTCCTACAGACACTaGAATAGCGTAAGCCACCACAGCAATGGAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: VMLGGVDFSYRH*NSVSHHSNGKG Trigger: TCCTTTTCCATTGCTGTGGTGGCTTACGCTATTGCAGTGTCTGTAGGAAAAGTCTACGCCACCAAGCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CAA 90 bp | CTTTGGGACATTCACTTTCACCGGGAGTTCGGAGTTCCAGTCCACTaGAATCTCAATTTCTTTGGTTGGGATATTAAGTTCCTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LWDIHFHREFGVPVH*NLNFFGWDIKFLWL Trigger: GAGCCAGAGGAACTTAATATCCCAACCAAAGAAATTGAGATTCAAGTGGACTGGAACTCCGAACTCCCGGTGAAAGTGAATGTCCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | AAGGGGTCTGCCAAGTACCTCACTATGAATCCAATCTaGAAACCTCCAAACACCAGCTGTATGATTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: KGSAKYLTMNPI*KPPNTSCMIPT Trigger: AGTTGGAATCATACAGCTGGTGTTTGGAGGTTTGCAGATTGGATTCATAGTGAGGTACTTGGCAGACCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | CATGTAAACACCCAGATAACAGCATCAGTCTTATTCTaGTTCCACAGACGAGGAACGTCACACACCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: HVNTQITASVLF*FHRRGTSHTCI Trigger: TATGCAGGTGTGTGACGTTCCTCGTCTGTGGAAGCAGAATAAGACTGATGCTGTTATCTGGGTGTTTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS TCA 72 bp | TGGAGAGGATGCCGTTGTAGTTTTTGGTTGAAACATTaGGCACGATCTTTAGCTGTGAGACCAGTACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: WRGCRCSFWLKH*ARSLAVRPVLG Trigger: TCCAAGTACTGGTCTCACAGCTAAAGATCGTGCTCAATGTTTCAACCAAAAACTACAACGGCATCCTCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS GCA 72 bp | TTCTCTGGATTTGACCTGGTTCTGCAGATGGAGGATTaGATCATGAACCGTCAGAAAGAATCTGTCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSGFDLVLQMED*IMNRQKESVLS Trigger: AGAAAGGACAGATTCTTTCTGACGGTTCATGATGCAATCCTCCATCTGCAGAACCAGGTCAAATCCAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CAA 72 bp | ATGATCCCGTTCTTGGTTGCCCTGAGTTGTCCTTTTTaGATGAGTTTCTGTATTCTTCTCAGTGCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MIPFLVALSCPF*MSFCILLSAFS Trigger: GCTGAAAGCACTGAGAAGAATACAGAAACTCATCAAAAAAGGACAACTCAGGGCAACCAAGAACGGGATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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| CDS CCA 72 bp | AATCTCAATTTCTTTGGTTGGGATATTAAGTTCCTCTaGCTCTTCCACATCTTCATCAGGCTCGAAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: NLNFFGWDIKFL*LFHIFIRLEGI Trigger: AATGCCTTCGAGCCTGATGAAGATGTGGAAGAGCCAGAGGAACTTAATATCCCAACCAAAGAAATTGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001253.8 |
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