Pregenerated sensors for SLC26A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001225Ensembl transcript IDs: ENSMUST00000001254.6, ENSMUST00000110854.9, ENSMUST00000167432.8, ENSMUST00000171616.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACGCTGGCAACGGAAAAGGCCACGGCAAAGCCGACGATCGCGATaGCGAAGCTGTCTCCTATGGTGTCTTGGAAAACTTCCACGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: TRWQRKRPRQSRRSR*RSCLLWCLGKLPRW Trigger: CCAGCGTGGAAGTTTTCCAAGACACCATAGGAGACAGCTTCGGCATCGCGATCGTCGGCTTTGCCGTGGCCTTTTCCGTTGCCAGCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 90 bp | CCTATGGTGTCTTGGAAAACTTCCACGCTGGGTGTAATAGGGGGTTaGAATCCAAGACTCATGTTCCCAACCACGGCCACGCCAAACCTG | + |
|
Preference number: 1 (lower is better) Translates to: PMVSWKTSTLGVIGG*NPRLMFPTTATPNL Trigger: CAGGTTTGGCGTGGCCGTGGTTGGGAACATGAGTCTTGGATTTCAACCCCCTATTACACCCAGCGTGGAAGTTTTCCAAGACACCATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 90 bp | CCAAGGCAATTAACTCCTGATTGCCATCAATCGGATAATCGTATTTaGGGGAGTACACGCTGGCAACGGAAAAGGCCACGGCAAAGCCGA | + |
|
Preference number: 1 (lower is better) Translates to: PRQLTPDCHQSDNRI*GSTRWQRKRPRQSR Trigger: TCGGCTTTGCCGTGGCCTTTTCCGTTGCCAGCGTGTACTCCCTCAAATACGATTATCCGATTGATGGCAATCAGGAGTTAATTGCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR GCA 90 bp | AAGTTTCCGAGTGCTAGCGCTGCCAGGACAGACTTTTGTAGCGGCTaGAGAAGAAACCCAATGGCAACTATGACGATCAACACGATGACA | + |
|
Preference number: 1 (lower is better) Translates to: KFPSASAARTDFCSG*RRNPMATMTINTMT Trigger: TGTCATCGTGTTGATCGTCATAGTTGCCATTGGGTTTCTTCTGCAGCCGCTACAAAAGTCTGTCCTGGCAGCGCTAGCACTCGGAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 90 bp | GTGCTGCACTTTGGAAATTGGGTCCTGAACACAATAGTTAGGAGTTaGAATGCTACACTTGCCGCCAGGCCTAATCCGAGTCCAAGGACA | + |
|
Preference number: 1 (lower is better) Translates to: VLHFGNWVLNTIVRS*NATLAARPNPSPRT Trigger: TGTCCTTGGACTCGGATTAGGCCTGGCGGCAAGTGTAGCATTTCAACTCCTAACTATTGTGTTCAGGACCCAATTTCCAAAGTGCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CCA 90 bp | CACAGATATGTGTCTAGATGTGCCCAAGAAAAAGTAGGTTATGACTaGGAAAAAGGCTGCGTACAACCCGTAGGCTGGAGGGATGTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: HRYVSRCAQEKVGYD*EKGCVQPVGWRDVD Trigger: GTCAACATCCCTCCAGCCTACGGGTTGTACGCAGCCTTTTTCCCAGTCATAACCTACTTTTTCTTGGGCACATCTAGACACATATCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR TCA 90 bp | ATATCACCACAAAGCCGACCTGCAGAACCCCCAGGAGCAACTGAATaGTTCCAGAAAGAACAGTTACTGATGCAGCCACCATTACTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: ISPQSRPAEPPGATE*FQKEQLLMQPPLLS Trigger: AGAAAGTAATGGTGGCTGCATCAGTAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGGGGGTTCTGCAGGTCGGCTTTGTGGTGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR TCA 90 bp | CAGAACCCCCAGGAGCAACTGAATGATTCCAGAAAGAACAGTTACTaGTGCAGCCACCATTACTTTCTCCTCTATGAACGAGTCATTTTC | + |
|
Preference number: 1 (lower is better) Translates to: QNPQEQLNDSRKNSY*CSHHYFLLYERVIF Trigger: GAAAATGACTCGTTCATAGAGGAGAAAGTAATGGTGGCTGCATCAGTAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGGGGGTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR CCA 90 bp | AAGTTTCTGCTTAAAGAAACCAATGTTTGCGAAGTAGATTGGAGATaGACATCTAAAAATTTTCACTCCTTCAGGCTCATACACTTCGGC | + |
|
Preference number: 1 (lower is better) Translates to: KFLLKETNVCEVDWR*TSKNFHSFRLIHFG Trigger: GCCGAAGTGTATGAGCCTGAAGGAGTGAAAATTTTTAGATGTCCATCTCCAATCTACTTCGCAAACATTGGTTTCTTTAAGCAGAAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CCA 90 bp | ATCAATAAGTTTCTGCTTAAAGAAACCAATGTTTGCGAAGTAGATTaGAGATGGACATCTAAAAATTTTCACTCCTTCAGGCTCATACAC | + |
|
Preference number: 1 (lower is better) Translates to: INKFLLKETNVCEVD*RWTSKNFHSFRLIH Trigger: GTGTATGAGCCTGAAGGAGTGAAAATTTTTAGATGTCCATCTCCAATCTACTTCGCAAACATTGGTTTCTTTAAGCAGAAACTTATTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGTTTCCGAGTGCTAGCGCTGCCAGGACAGACTTTTGTAGCGGCTGCAGACCTCCCGTGCTCTCCTaGACCCCTGATCTGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FKFPSASAARTDFCSGCRPPVLS*TPDLER Trigger: CCTTTCCAGATCAGGGGTTCAGGAGAGCACGGGAGG...TCTGCAGCCGCTACAAAAGTCTGTCCTGGCAGCGCTAGCACTCGGAAACTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CAA 90 bp | GGCAAAGCCGACGATCGCGATGCCGAAGCTGTCTCCTATGGTGTCTaGGAAAACTTCCACGCTGGGTGTAATAGGGGGTTGAAATCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GKADDRDAEAVSYGV*ENFHAGCNRGLKSK Trigger: CTTGGATTTCAACCCCCTATTACACCCAGCGTGGAAGTTTTCCAAGACACCATAGGAGACAGCTTCGGCATCGCGATCGTCGGCTTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCGACCTGCAGAACCCCCAGGAGCAACTGAATGATTCCAGAAAGAACAGTTACGACTGGGAAAAAGGCTaGGTACAACCCGTAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ADLQNPQEQLNDSRKNSYDWEKG*VQPVGW Trigger: CCAGCCTACGGGTTGTACGCAGCCTTTTTCCCAGTC...GTAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGGGGGTTCTGCAGGTCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR CAA 90 bp | TCCTATGGTGTCTTGGAAAACTTCCACGCTGGGTGTAATAGGGGGTaGAAATCCAAGACTCATGTTCCCAACCACGGCCACGCCAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: SYGVLENFHAGCNRG*KSKTHVPNHGHAKP Trigger: AGGTTTGGCGTGGCCGTGGTTGGGAACATGAGTCTTGGATTTCAACCCCCTATTACACCCAGCGTGGAAGTTTTCCAAGACACCATAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGACGATCGCGATGCCGAAGCTGTCTCCTATGGTGTCTTGGAAAACTTCCACGCTGGCAGCTGTAGCATaGATTTCAGTTGAGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: PTIAMPKLSPMVSWKTSTLAAVA*ISVEKP Trigger: TGGTTTCTCAACTGAAATTCATGCTACAGCTGCCAG...CGTGGAAGTTTTCCAAGACACCATAGGAGACAGCTTCGGCATCGCGATCGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAAGACCGACTCCAGGACTTTGAATATAGAGAATGGGTCGCTGTATGCTGGGACTGGGAAAAAGGCTaGGTACAACCCGTAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CEDRLQDFEYREWVAVCWDWEKG*VQPVGW Trigger: CCAGCCTACGGGTTGTACGCAGCCTTTTTCCCAGTC...CCAGCATACAGCGACCCATTCTCTATATTCAAAGTCCTGGAGTCGGTCTTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR CAA 90 bp | AACGAGTCATTTTCTGTGGAGCTTGAGGACAACTCTGAAGAAGCATaGGGGTCCGAGACCACTCTTGTAACGACAACTCCCACCATCATA | + |
|
Preference number: 2 (lower is better) Translates to: NESFSVELEDNSEEA*GSETTLVTTTPTII Trigger: TATGATGGTGGGAGTTGTCGTTACAAGAGTGGTCTCGGACCCCAATGCTTCTTCAGAGTTGTCCTCAAGCTCCACAGAAAATGACTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAGCCACTGATTAGGGACTCGGATAGGTATATCACCACAAAGCCGACCTGCCCAGGAGCAACTGAATaGTTCCAGAAAGAACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VKPLIRDSDRYITTKPTCPGATE*FQKEQL Trigger: TAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGG...GCAGGTCGGCTTTGTGGTGATATACCTATCCGAGTCCCTAATCAGTGGCTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCACGCCAAACCTGTCTTCAAAGTTACAGCCATAGGACACACCTGTGGCAATCCAGGAGCAACTGAATaGTTCCAGAAAGAACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GHAKPVFKVTAIGHTCGNPGATE*FQKEQL Trigger: TAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGG...ATTGCCACAGGTGTGTCCTATGGCTGTAACTTTGAAGACAGGTTTGGCGTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CAA 90 bp | ATCAGACCTCGTTTCTGCAGTTTTCGGATTTTCTTCAAAGCTTTGTaGCGCTTCCGTAGAATTCGAAGTGGGCTAAAGCCAACAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: IRPRFCSFRIFFKAL*RFRRIRSGLKPTAS Trigger: TGATGCTGTTGGCTTTAGCCCACTTCGAATTCTACGGAAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAGGTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CAA 90 bp | TGTATCAGACCTCGTTTCTGCAGTTTTCGGATTTTCTTCAAAGCTTaGTTGCGCTTCCGTAGAATTCGAAGTGGGCTAAAGCCAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CIRPRFCSFRIFFKA*LRFRRIRSGLKPTA Trigger: TGCTGTTGGCTTTAGCCCACTTCGAATTCTACGGAAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAGGTCTGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCGCTTCCGTAGAATTCGAAGTGGGCTAAAGCCAACAGCATCAATAAGTTTCACGAGTCATTTTCTGTaGAGCTTGAGGACAACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LRFRRIRSGLKPTASISFTSHFL*SLRTTL Trigger: CAGAGTTGTCCTCAAGCTCCACAGAAAATGACTCGT...GAAACTTATTGATGCTGTTGGCTTTAGCCCACTTCGAATTCTACGGAAGCGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTGTAAAATAGGTGTCATCTGTATCAGACCTCGTTTCTGCAGTTTTCGGATTACCCCCAGGAGCAACTaGATGATTCCAGAAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: SCKIGVICIRPRFCSFRITPRSN*MIPERT Trigger: TGTTCTTTCTGGAATCATTCAGTTGCTCCTGGGGGT...AATCCGAAAACTGCAGAAACGAGGTCTGATACAGATGACACCTATTTTACAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCAGACCTCGTTTCTGCAGTTTTCGGATTTTCTTCAAAGCTTTGTTGCGCTTGGTGTAATAGGGGGTTaGAATCCAAGACTCATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: YQTSFLQFSDFLQSFVALGVIGG*NPRLMF Trigger: GAACATGAGTCTTGGATTTCAACCCCCTATTACACC...AAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAGGTCTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCGGAAGTTTGCTTCTGTAACGCTGATTGATTTCTTTAAAGACAAACACGACACTCAGAACTGGAAATaGACCCACAGATATGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HRKFASVTLIDFFKDKHDTQNWK*THRYVS Trigger: AGACACATATCTGTGGGTCCATTTCCAGTTCTGAGT...GTCGTGTTTGTCTTTAAAGAAATCAATCAGCGTTACAGAAGCAAACTTCCGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGTGTGAAGACCGACTCCAGGACTTTGAATATAGAGAATGGGTCGCTGTATCATCATACTCAGAACTaGAAATGGACCCACAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: ICVKTDSRTLNIENGSLYHHTQN*KWTHRY Trigger: ATATCTGTGGGTCCATTTCCAGTTCTGAGTATGATG...ATACAGCGACCCATTCTCTATATTCAAAGTCCTGGAGTCGGTCTTCACACAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACTTCATCATCGAAGAATTCACACCGAGCAAGTTTGTCAATGAAATCATCCGAAGCTGTCTCCTATaGTGTCTTGGAAAACTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CDFIIEEFTPSKFVNEIIRSCLL*CLGKLP Trigger: TGGAAGTTTTCCAAGACACCATAGGAGACAGCTTCG...GATGATTTCATTGACAAACTTGCTCGGTGTGAATTCTTCGATGATGAAGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAAGTTTCTGCTTAAAGAAACCAATGTTTGCGAAGTAGATTGGAGATGGACAGCGATGTTCGTCTTCTaGATTTGTGTGAAGACCGAC | + |
|
Preference number: 2 (lower is better) Translates to: NKFLLKETNVCEVDWRWTAMFVF*ICVKTD Trigger: GTCGGTCTTCACACAAATTCAGAAGACGAACATCGC...TGTCCATCTCCAATCTACTTCGCAAACATTGGTTTCTTTAAGCAGAAACTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAAGGTTGTTTTTGTTATaGCAGATGAGAATCCTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTRLFLL*QMRILP Trigger: CGGAAGGATTCTCATCTGTCATAACAAAAACAACCT...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACTTCATCATCGAAGAATTCACACCGAGCAAGTTTGTCAATGAAATCATCCATCATACTCAGAACTaGAAATGGACCCACAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: CDFIIEEFTPSKFVNEIIHHTQN*KWTHRY Trigger: ATATCTGTGGGTCCATTTCCAGTTCTGAGTATGATG...GATGATTTCATTGACAAACTTGCTCGGTGTGAATTCTTCGATGATGAAGTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR GCA 72 bp | GGAGGGATGTTGACCAGCAGAGCAAATGCTAAACCTTaGAGTACAGCCACCAGCCCGGTGCTGATGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGMLTSRANAKP*STATSPVLMPE Trigger: CTCTGGCATCAGCACCGGGCTGGTGGCTGTACTGCAAGGTTTAGCATTTGCTCTGCTGGTCAACATCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR GCA 72 bp | CAACGGAAAAGGCCACGGCAAAGCCGACGATCGCGATaGCGAAGCTGTCTCCTATGGTGTCTTGGAAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: QRKRPRQSRRSR*RSCLLWCLGKL Trigger: AAGTTTTCCAAGACACCATAGGAGACAGCTTCGGCATCGCGATCGTCGGCTTTGCCGTGGCCTTTTCCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 72 bp | TCTTGGAAAACTTCCACGCTGGGTGTAATAGGGGGTTaGAATCCAAGACTCATGTTCCCAACCACGGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: SWKTSTLGVIGG*NPRLMFPTTAT Trigger: CGTGGCCGTGGTTGGGAACATGAGTCTTGGATTTCAACCCCCTATTACACCCAGCGTGGAAGTTTTCCAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 72 bp | ATGGGTCGCTGTATGCTGGGACTGGCAGCTGTAGCATaGATTTCAGTTGAGAAACCAGAACGTGAATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MGRCMLGLAAVA*ISVEKPEREWQ Trigger: CTGCCATTCACGTTCTGGTTTCTCAACTGAAATTCATGCTACAGCTGCCAGTCCCAGCATACAGCGACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR TCA 72 bp | TTAACTCCTGATTGCCATCAATCGGATAATCGTATTTaGGGGAGTACACGCTGGCAACGGAAAAGGCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: LTPDCHQSDNRI*GSTRWQRKRPR Trigger: CCGTGGCCTTTTCCGTTGCCAGCGTGTACTCCCTCAAATACGATTATCCGATTGATGGCAATCAGGAGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR GCA 72 bp | TCTGGAAAGGGCTGTGCTCCCTGCAAATCCTTTGAATaGTCCAGTGAATATGTTGCTCACTCCCAAGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SGKGCAPCKSFE*SSEYVAHSQGN Trigger: ATTGCCTTGGGAGTGAGCAACATATTCACTGGAGCATTCAAAGGATTTGCAGGGAGCACAGCCCTTTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAAGACCGACTCCAGGACTTTGAATATAGAGAATGGGTCGCTGTATGCTGGCATTTTCTGTGGAGCTaGAGGACAACTCTGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CEDRLQDFEYREWVAVCWHFLWS*RTTLKK Trigger: CTTCTTCAGAGTTGTCCTCAAGCTCCACAGAAAATG...CCAGCATACAGCGACCCATTCTCTATATTCAAAGTCCTGGAGTCGGTCTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGGAAAGGGCTGTGCTCCCTGCAAATCCTTTGAATGCTCCAGTGAATATGCATTTTCTGTGGAGCTaGAGGACAACTCTGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLERAVLPANPLNAPVNMHFLWS*RTTLKK Trigger: CTTCTTCAGAGTTGTCCTCAAGCTCCACAGAAAATG...CATATTCACTGGAGCATTCAAAGGATTTGCAGGGAGCACAGCCCTTTCCAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 72 bp | TTTGGAAATTGGGTCCTGAACACAATAGTTAGGAGTTaGAATGCTACACTTGCCGCCAGGCCTAATCCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FGNWVLNTIVRS*NATLAARPNPS Trigger: ACTCGGATTAGGCCTGGCGGCAAGTGTAGCATTTCAACTCCTAACTATTGTGTTCAGGACCCAATTTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR TCA 72 bp | CAGTTACTGATGCAGCCACCATTACTTTCTCCTCTATaGACGAGTCATTTTCTGTGGAGCTTGAGGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: QLLMQPPLLSPL*TSHFLWSLRTT Trigger: AGTTGTCCTCAAGCTCCACAGAAAATGACTCGTTCATAGAGGAGAAAGTAATGGTGGCTGCATCAGTAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTTTCTGCAGTTTTCGGATTTTCTTCAAAGCTTTGTTGCGCTTCCGTAGAAGGGTGTAATAGGGGGTaGAAATCCAAGACTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LVSAVFGFSSKLCCASVEGCNRG*KSKTHV Trigger: AACATGAGTCTTGGATTTCAACCCCCTATTACACCC...TTCTACGGAAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CAA 72 bp | GACGATCGCGATGCCGAAGCTGTCTCCTATGGTGTCTaGGAAAACTTCCACGCTGGGTGTAATAGGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DDRDAEAVSYGV*ENFHAGCNRGL Trigger: CAACCCCCTATTACACCCAGCGTGGAAGTTTTCCAAGACACCATAGGAGACAGCTTCGGCATCGCGATCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| CDS-3UTR CCA 90 bp | GCCGACCTGCAGAACCCCCAGGAGCAACTGAATGATTCCAGAAAGAACAGTTACTGGAGTACACCGGTCTaGCCACCACATACTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLQNPQEQLNDSRKNSYWSTPV*PPHTDS Trigger: GGAATCAGTATGTGGTGGCCAGACCGGTGTACTCCA...GTAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGGGGGTTCTGCAGGTCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| CDS-3UTR CCA 90 bp | AATCGGATAATCGTATTTGAGGGAGTACACGCTGGCAACGGAAAAGGCCACGGCTGGAGTACACCGGTCTaGCCACCACATACTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRIIVFEGVHAGNGKGHGWSTPV*PPHTDS Trigger: GGAATCAGTATGTGGTGGCCAGACCGGTGTACTCCA...GCCGTGGCCTTTTCCGTTGCCAGCGTGTACTCCCTCAAATACGATTATCCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| 3UTR CAA 72 bp | GTCTTGGAAAACTTCCACGCTGGGTGTAATAGGGGGTaGAAATCCAAGACTCATGTTCCCAACCACGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLENFHAGCNRG*KSKTHVPNHGH Trigger: GTGGCCGTGGTTGGGAACATGAGTCTTGGATTTCAACCCCCTATTACACCCAGCGTGGAAGTTTTCCAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| CDS-3UTR TCA 90 bp | GCCGTGGTGAAGCCACTGATTAGGGACTCGGATAGGTATATCACCACAAAGCCGTCCAGGAATGTCTTGTaGTGTCTGTGCGTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVVKPLIRDSDRYITTKPSRNVL*CLCVFL Trigger: TAAGAAGACGCACAGACATCACAAGACATTCCTGGA...CGGCTTTGTGGTGATATACCTATCCGAGTCCCTAATCAGTGGCTTCACCACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR CAA 72 bp | TTTTCTGTGGAGCTTGAGGACAACTCTGAAGAAGCATaGGGGTCCGAGACCACTCTTGTAACGACAACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVELEDNSEEA*GSETTLVTTTP Trigger: GGGAGTTGTCGTTACAAGAGTGGTCTCGGACCCCAATGCTTCTTCAGAGTTGTCCTCAAGCTCCACAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| 3UTR CAA 72 bp | CCTGATCTGGAAAGGGCTGTGCTCCCTGCAAATCCTTaGAATGCTCCAGTGAATATGTTGCTCACTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDLERAVLPANP*NAPVNMLLTPK Trigger: CTTGGGAGTGAGCAACATATTCACTGGAGCATTCAAAGGATTTGCAGGGAGCACAGCCCTTTCCAGATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATCCTCCCGTGCTCTCCTaGACCCCTGATCTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQEDNDLERNRSALQKYNPPVLS*TPDLER Trigger: CCTTTCCAGATCAGGGGTTCAGGAGAGCACGGGAGG...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGACCGACTCCAGGACTTTGAATATAGAGAATGGGTCGCTGTATGCTGGTCCAGGAATGTCTTGTaGTGTCTGTGCGTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CEDRLQDFEYREWVAVCWSRNVL*CLCVFL Trigger: TAAGAAGACGCACAGACATCACAAGACATTCCTGGA...CCAGCATACAGCGACCCATTCTCTATATTCAAAGTCCTGGAGTCGGTCTTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGACTGGGAAAAAGGCTaGGTACAACCCGTAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYDWEKG*VQPVGW Trigger: CCAGCCTACGGGTTGTACGCAGCCTTTTTCCCAGTC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATCCTGAACCCCTGATCTaGAAAGGGCTGTGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQEDNDLERNRSALQKYNPEPLI*KGLCSL Trigger: CAGGGAGCACAGCCCTTTCCAGATCAGGGGTTCAGG...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACTGGAGTACACCGGTCTaGCCACCACATACTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYWSTPV*PPHTDS Trigger: GGAATCAGTATGTGGTGGCCAGACCGGTGTACTCCA...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| 3UTR CAA 72 bp | CGTTTCTGCAGTTTTCGGATTTTCTTCAAAGCTTTGTaGCGCTTCCGTAGAATTCGAAGTGGGCTAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFCSFRIFFKAL*RFRRIRSGLKP Trigger: TGGCTTTAGCCCACTTCGAATTCTACGGAAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| CDS-3UTR TCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGCGATGTTCGTCTTCTaGATTTGTGTGAAGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYAMFVF*ICVKTD Trigger: GTCGGTCTTCACACAAATTCAGAAGACGAACATCGC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR GCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAGTGTTTTGCCTCCCGTaGTCTCCTGAACCCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQVFCLP*SPEPLI Trigger: GATCAGGGGTTCAGGAGAGCACGGGAGGCAAAACAC...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATACCCCCAGGAGCAACTaGATGATTCCAGAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: EQEDNDLERNRSALQKYNTPRSN*MIPERT Trigger: TGTTCTTTCTGGAATCATTCAGTTGCTCCTGGGGGT...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACATCGGATAATCGTATTTaGGGGAGTACACGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTSDNRI*GSTRWQ Trigger: TTGCCAGCGTGTACTCCCTCAAATACGATTATCCGA...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGTGGTATTGATCGGCTaGTCAAGTTCTTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYVVLIG*SSSSIW Trigger: CCAGATAGAAGAACTTGATCAGCCGATCAATACCAC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAGGAAAGACACTGCTaGAAAATCGAGGATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYKERHC*KIEDEA Trigger: AGCCTCATCCTCGATTTTTCAGCAGTGTCTTTCCTT...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACCGAAGCTGTCTCCTATaGTGTCTTGGAAAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYRSCLL*CLGKLP Trigger: TGGAAGTTTTCCAAGACACCATAGGAGACAGCTTCG...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAATCGAGGATGAGGCTGTaGAGGCTGATTTTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQSRMRL*RLILGM Trigger: CATCCCCAAAATCAGCCTCCACAGCCTCATCCTCGA...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACATCCAGGAATGTCTTGTaGTGTCTGTGCGTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTSRNVL*CLCVFL Trigger: TAAGAAGACGCACAGACATCACAAGACATTCCTGGA...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR GCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAGGCTGGCAACCAAGATaGTATGGGGAACAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQGWQPR*YGEQRQ Trigger: CTGTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCC...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR GCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAAAGGGCTGTGCTCCCTaGAAATCCTTTGAATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQKGCAP*KSFECS Trigger: GGAGCATTCAAAGGATTTGCAGGGAGCACAGCCCTT...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAGCAACCAAGATGCTATaGGGAACAAAGACAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQATKML*GTKTGR Trigger: TCGCCCTGTCTTTGTTCCCCATAGCATCTTGGTTGC...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACACTCAGAACTGGAAATaGACCCACAGATATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYTQNWK*THRYVS Trigger: AGACACATATCTGTGGGTCCATTTCCAGTTCTGAGT...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAACGAGTCATTTTCTGTaGAGCTTGAGGACAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTTSHFL*SLRTTL Trigger: CAGAGTTGTCCTCAAGCTCCACAGAAAATGACTCGT...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACACAATGTGCTGCACTTTaGAAATTGGGTCCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTQCAAL*KLGPEH Trigger: GTGTTCAGGACCCAATTTCCAAAGTGCAGCACATTG...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATCCAGGAGCAACTGAATaGTTCCAGAAAGAACAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EQEDNDLERNRSALQKYNPGATE*FQKEQL Trigger: TAACTGTTCTTTCTGGAATCATTCAGTTGCTCCTGG...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGCTGGAATTAAACTTTaGAGTGCTGTAGTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYAGIKL*SAVVLL Trigger: AAGAAGGACTACAGCACTTCAAAGTTTAATTCCAGC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAACTGGCAGCTGTAGCATaGATTTCAGTTGAGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQLAAVA*ISVEKP Trigger: TGGTTTCTCAACTGAAATTCATGCTACAGCTGCCAG...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR TCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAGGTGTAATAGGGGGTTaGAATCCAAGACTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQGVIGG*NPRLMF Trigger: GAACATGAGTCTTGGATTTCAACCCCCTATTACACC...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATCCTATTTCAGCAAACTaGATCAGCATTCCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQEDNDLERNRSALQKYNPISAN*ISIPFK Trigger: CTTAAAGGGAATGCTGATGCAGTTTGCTGAAATAGG...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACATCTTCAAAGCTTTGTTaGGCTTCCGTAGAATTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTSSKLC*ASVEFE Trigger: TTCGAATTCTACGGAAGCGCAACAAAGCTTTGAAGA...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAACTTTATCTTGTAGGCTaGCAACCAAGATGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQLYLVG*QPRCYG Trigger: CCCATAGCATCTTGGTTGCCAGCCTACAAGATAAAG...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| 3UTR CAA 72 bp | GTGACTTCATCATCGAAGAATTCACACCGAGCAAGTTaGTCAATGAAATCATCATCGGTTCCCACAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSSSKNSHRAS*SMKSSSVPTIY Trigger: ATATATTGTGGGAACCGATGATGATTTCATTGACAAACTTGCTCGGTGTGAATTCTTCGATGATGAAGTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATTGCAAATCCTTTGAATaGTCCAGTGAATATGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQEDNDLERNRSALQKYNCKSFE*SSEYVA Trigger: AGCAACATATTCACTGGAGCATTCAAAGGATTTGCA...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGTTTGCGAAGTAGATTaGAGATGGACATCTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYVCEVD*RWTSKN Trigger: ATTTTTAGATGTCCATCTCCAATCTACTTCGCAAAC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAACATCATACTCAGAACTaGAAATGGACCCACAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQHHTQN*KWTHRY Trigger: ATATCTGTGGGTCCATTTCCAGTTCTGAGTATGATG...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR GCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAAAAGAAACCAATGTTTaGGAAGTAGATTGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQKETNV*EVDWRW Trigger: CCATCTCCAATCTACTTCGCAAACATTGGTTTCTTT...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CCA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAATCAAGTTCTTCTATCTaGTTGTTGTCCAATTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EDNDLERNRSALQKYNKQSSSSI*LLSNSS Trigger: CGAAGAATTGGACAACAACCAGATAGAAGAACTTGA...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS TCA 90 bp | AGATGCTATGGGGAACAAAGACAGGGCGATTTTCTTGGCCTTCTGTaGGGAGCAGCTACAACACCCTTTGAGATGGTCCAGGAATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RCYGEQRQGDFLGLL*GAATTPFEMVQECL Trigger: AAGACATTCCTGGACCATCTCAAAGGGTGTTGTAGCTGCTCCTCACAGAAGGCCAAGAAAATCGCCCTGTCTTTGTTCCCCATAGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS CCA 90 bp | GCCAGAGACGATGTCACTGAGAAGCCATTCCTTTATCTTGTAGGCTaGCAACCAAGATGCTATGGGGAACAAAGACAGGGCGATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARDDVTEKPFLYLVG*QPRCYGEQRQGDFL Trigger: AAGAAAATCGCCCTGTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCCTACAAGATAAAGGAATGGCTTCTCAGTGACATCGTCTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS TCA 90 bp | GAGGAGCAGCTACAACACCCTTTGAGATGGTCCAGGAATGTCTTGTaGTGTCTGTGCGTCTTCTTAAACTCCTCTCCAAAAGTCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EEQLQHPLRWSRNVL*CLCVFLNSSPKVFV Trigger: CACAAAGACTTTTGGAGAGGAGTTTAAGAAGACGCACAGACATCACAAGACATTCCTGGACCATCTCAAAGGGTGTTGTAGCTGCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS TCA 90 bp | CCGTTCCAGTCTATGTCAAAGGGCAGATCTGTGGTATTGATCGGCTaGTCAAGTTCTTCTATCTGGTTGTTGTCCAATTCTTCGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFQSMSKGRSVVLIG*SSSSIWLLSNSSSE Trigger: CTCCGACGAAGAATTGGACAACAACCAGATAGAAGAACTTGATCAGCCGATCAATACCACAGATCTGCCCTTTGACATAGACTGGAACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | ATTTGTGTGAAGACCGACTCCAGGACTTTGAATATAGAGAATGGGTCGCTGTATCCTCTCCAAAAGTCTTaGTGGAGTACACCGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ICVKTDSRTLNIENGSLYPLQKS*WSTPVW Trigger: CCAGACCGGTGTACTCCACAAAGACTTTTGGAGAGG...ATACAGCGACCCATTCTCTATATTCAAAGTCCTGGAGTCGGTCTTCACACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| CDS-3UTR CAA 90 bp | CTCGTTTCTGCAGTTTTCGGATTTTCTTCAAAGCTTTGTTGCGCTTCCGTAGAACCTCTCCAAAAGTCTTaGTGGAGTACACCGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSAVFGFSSKLCCASVEPLQKS*WSTPVW Trigger: CCAGACCGGTGTACTCCACAAAGACTTTTGGAGAGG...TTCTACGGAAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171616.8 |
||
| CDS-3UTR CAA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGTCTCCTATGGTGTCTaGGAAAACTTCCACGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYVSYGV*ENFHAG Trigger: CCCAGCGTGGAAGTTTTCCAAGACACCATAGGAGAC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS TCA 90 bp | GAAGATCCCCGTTCCAGTCTATGTCAAAGGGCAGATCTGTGGTATTaGTCGGCTGATCAAGTTCTTCTATCTGGTTGTTGTCCAATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDPRSSLCQRADLWY*SADQVLLSGCCPIL Trigger: AAGAATTGGACAACAACCAGATAGAAGAACTTGATCAGCCGATCAATACCACAGATCTGCCCTTTGACATAGACTGGAACGGGGATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS TCA 90 bp | ACCAAGATGCTACAACACCCTTTGAGATGGTCCAGGAATGTCTTGTaGTGTCTGTGCGTCTTCTTAAACTCCTCTCCAAAAGTCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TKMLQHPLRWSRNVL*CLCVFLNSSPKVFV Trigger: CACAAAGACTTTTGGAGAGGAGTTTAAGAAGACGCACAGACATCACAAGACATTCCTGGACCATCTCAAAGGGTGTTGTAGCATCTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATGTTGAAATGCTACACTaGCCGCCAGGCCTAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EQEDNDLERNRSALQKYNVEMLH*PPGLIR Trigger: TCGGATTAGGCCTGGCGGCAAGTGTAGCATTTCAAC...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATCTGTGGAGGCTGATTTaGGGGATGGTGATGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQEDNDLERNRSALQKYNLWRLI*GMVMLR Trigger: CCTCAACATCACCATCCCCAAAATCAGCCTCCACAG...ATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS GCA 90 bp | GTGCATATAAACCCTTTAGGTGTCATCTGTATCAGACCTCGTTTCTaGAGTTTTCGGATTTTCTTCAAAGCTTTGTTGCGCTTCCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHINPLGVICIRPRF*SFRIFFKALLRFRR Trigger: TCTACGGAAGCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAGGTCTGATACAGATGACACCTAAAGGGTTTATATGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAACCTCTCCAAAAGTCTTaGTGGAGTACACCGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EDNDLERNRSALQKYNKQPLQKS*WSTPVW Trigger: CCAGACCGGTGTACTCCACAAAGACTTTTGGAGAGG...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | CATAAAATGTTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACGGGTGTAATAGGGGGTaGAAATCCAAGACTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HKMLSKKIMTWKGIGLRYGCNRG*KSKTHV Trigger: AACATGAGTCTTGGATTTCAACCCCCTATTACACCC...GTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAACATTTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACACATTTTCTGTGGAGCTaGAGGACAACTCTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTHFLWS*RTTLKK Trigger: CTTCTTCAGAGTTGTCCTCAAGCTCCACAGAAAATG...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACATTCTTCAAAGCTTTGTaGCGCTTCCGTAGAATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTFFKAL*RFRRIR Trigger: TCGAATTCTACGGAAGCGCAACAAAGCTTTGAAGAA...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGCAAGAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAAGTTCTTCTATCTGGTaGTTGTCCAATTCTTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSKKIMTWKGIGLRYKNTSSSIW*LSNSSS Trigger: CGACGAAGAATTGGACAACAACCAGATAGAAGAACT...TGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTCTTGCTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAGCTGCACTTTGGAAATaGGGTCCTGAACACAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: EDNDLERNRSALQKYNKQAALWK*GPEHNS Trigger: ACTATTGTGTTCAGGACCCAATTTCCAAAGTGCAGC...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAATCACACCGAGCAAGTTaGTCAATGAAATCATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: EDNDLERNRSALQKYNKQSHRAS*SMKSSS Trigger: CGATGATGATTTCATTGACAAACTTGCTCGGTGTGA...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS-3UTR CAA 90 bp | GAAGATAATGACTTGGAAAGGAATCGGTCTGCGCTACAAAAATACAATAAACAAATTTTCTTCAAAGCTTaGTTGCGCTTCCGTAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: EDNDLERNRSALQKYNKQIFFKA*LRFRRI Trigger: AATTCTACGGAAGCGCAACAAAGCTTTGAAGAAAAT...TTGTTTATTGTATTTTTGTAGCGCAGACCGATTCCTTTCCAAGTCATTATCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS TCA 72 bp | GGGGAACAAAGACAGGGCGATTTTCTTGGCCTTCTGTaGGGAGCAGCTACAACACCCTTTGAGATGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEQRQGDFLGLL*GAATTPFEMVQ Trigger: CTGGACCATCTCAAAGGGTGTTGTAGCTGCTCCTCACAGAAGGCCAAGAAAATCGCCCTGTCTTTGTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS CAA 90 bp | GCTGGCAACCAAGATGCTATGGGGAACAAAGACAGGGCGATTTTCTaGGCCTTCTGTGAGGAGCAGCTACAACACCCTTTGAGATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGNQDAMGNKDRAIF*AFCEEQLQHPLRWS Trigger: GGACCATCTCAAAGGGTGTTGTAGCTGCTCCTCACAGAAGGCCAAGAAAATCGCCCTGTCTTTGTTCCCCATAGCATCTTGGTTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS TCA 72 bp | TCTTGGCCTTCTGTGAGGAGCAGCTACAACACCCTTTaGGATGGTCCAGGAATGTCTTGTGATGTCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SWPSVRSSYNTL*DGPGMSCDVCA Trigger: CGCACAGACATCACAAGACATTCCTGGACCATCTCAAAGGGTGTTGTAGCTGCTCCTCACAGAAGGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS TCA 72 bp | CTTGTAGGCTGGCAACCAAGATGCTACAACACCCTTTaGGATGGTCCAGGAATGTCTTGTGATGTCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVGWQPRCYNTL*DGPGMSCDVCA Trigger: CGCACAGACATCACAAGACATTCCTGGACCATCTCAAAGGGTGTTGTAGCATCTTGGTTGCCAGCCTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110854.9 ENSMUST00000171616.8 |
||
| CDS CCA 72 bp | ACTCCTCTCCAAAAGTCTTTGTGGAGTACACCGGTCTaGCCACCACATACTGATTCCCTATGGCTTCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: TPLQKSLWSTPV*PPHTDSLWLRS Trigger: TGATCGAAGCCATAGGGAATCAGTATGTGGTGGCCAGACCGGTGTACTCCACAAAGACTTTTGGAGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001254.6 ENSMUST00000110854.9 ENSMUST00000167432.8 ENSMUST00000171616.8 |
||
| CDS CAA 72 bp | CAAGATGCTATGGGGAACAAAGACAGGGCGATTTTCTaGGCCTTCTGTGAGGAGCAGCTACAACACCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QDAMGNKDRAIF*AFCEEQLQHPL Trigger: CAAAGGGTGTTGTAGCTGCTCCTCACAGAAGGCCAAGAAAATCGCCCTGTCTTTGTTCCCCATAGCATCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS CCA 72 bp | GATGTCACTGAGAAGCCATTCCTTTATCTTGTAGGCTaGCAACCAAGATGCTATGGGGAACAAAGACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DVTEKPFLYLVG*QPRCYGEQRQG Trigger: GCCCTGTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCCTACAAGATAAAGGAATGGCTTCTCAGTGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS GCA 72 bp | AAGCCATTCCTTTATCTTGTAGGCTGGCAACCAAGATaGTATGGGGAACAAAGACAGGGCGATTTTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KPFLYLVGWQPR*YGEQRQGDFLG Trigger: GCCAAGAAAATCGCCCTGTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCCTACAAGATAAAGGAATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS CCA 72 bp | ATTCCTTTATCTTGTAGGCTGGCAACCAAGATGCTATaGGGAACAAAGACAGGGCGATTTTCTTGGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IPLSCRLATKML*GTKTGRFSWPS Trigger: AGAAGGCCAAGAAAATCGCCCTGTCTTTGTTCCCCATAGCATCTTGGTTGCCAGCCTACAAGATAAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001254.6 ENSMUST00000167432.8 |
||
| CDS TCA 72 bp | CGTTCCAGTCTATGTCAAAGGGCAGATCTGTGGTATTaGTCGGCTGATCAAGTTCTTCTATCTGGTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSSLCQRADLWY*SADQVLLSGCC Trigger: ACAACAACCAGATAGAAGAACTTGATCAGCCGATCAATACCACAGATCTGCCCTTTGACATAGACTGGAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS GCA 72 bp | AACCCTTTAGGTGTCATCTGTATCAGACCTCGTTTCTaGAGTTTTCGGATTTTCTTCAAAGCTTTGTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: NPLGVICIRPRF*SFRIFFKALLR Trigger: GCGCAACAAAGCTTTGAAGAAAATCCGAAAACTGCAGAAACGAGGTCTGATACAGATGACACCTAAAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS TCA 72 bp | TCTATGTCAAAGGGCAGATCTGTGGTATTGATCGGCTaGTCAAGTTCTTCTATCTGGTTGTTGTCCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SMSKGRSVVLIG*SSSSIWLLSNS Trigger: AGAATTGGACAACAACCAGATAGAAGAACTTGATCAGCCGATCAATACCACAGATCTGCCCTTTGACATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||
| CDS CAA 90 bp | TTGTCAATGAAATCATCATCGGTTCCCACAATATATACGTCCACCTaGATCCTAATAAATTCTTGTAAAATCGTTCTGAGGCCCCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LSMKSSSVPTIYTST*ILINSCKIVLRPLI Trigger: AATGAGGGGCCTCAGAACGATTTTACAAGAATTTATTAGGATCAAGGTGGACGTATATATTGTGGGAACCGATGATGATTTCATTGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001254.6 |
||