Pregenerated sensors for SLC26A11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039908Ensembl transcript IDs: ENSMUST00000050880.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTCAAATACTCACACCTAGGGGACAGCAGGAAAGTGACACCCTaGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATG | + |
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Preference number: 1 (lower is better) Translates to: ALKYSHLGDSRKVTP*KSYMAPCCSPEPPM Trigger: CATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCTGCTGTCCCCTAGGTGTGAGTATTTGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR GCA 90 bp | AAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTaGCTTTTAAGTCCCACCAGGTTGGTGAGTCTATCAGGTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: KSYMAPCCSPEPPMQ*LLSPTRLVSLSGDS Trigger: GGAGTCACCTGATAGACTCACCAACCTGGTGGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR CCA 90 bp | TCACCTTACCCTGCCAGACCAGGCCAGAAGCCATGTGTGTGTCTCTaGGTCTCTGTCTCTCTCTCTCTCTCTCTGAAAGACTTTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: SPYPARPGQKPCVCL*VSVSLSLSLKDFSV Trigger: GACTGAAAAGTCTTTCAGAGAGAGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGCTTCTGGCCTGGTCTGGCAGGGTAAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR CCA 90 bp | GATTTTTCTCCAGTAGGACCTGATTCCAAAGAAGAATCTGGGATCTaGAGAGTGTCACCTTACCCTGCCAGACCAGGCCAGAAGCCATGT | + |
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Preference number: 1 (lower is better) Translates to: DFSPVGPDSKEESGI*RVSPYPARPGQKPC Trigger: ACATGGCTTCTGGCCTGGTCTGGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCTTTGGAATCAGGTCCTACTGGAGAAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR TCA 90 bp | TATGCAGTGCCTTTTAAGTCCCACCAGGTTGGTGAGTCTATCAGGTaGCTCCAAGTCATGGTGACAGAACCTTCCAGAAACCCTTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: YAVPFKSHQVGESIR*LQVMVTEPSRNPSY Trigger: ATAGGAAGGGTTTCTGGAAGGTTCTGTCACCATGACTTGGAGTCACCTGATAGACTCACCAACCTGGTGGGACTTAAAAGGCACTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR-3UTR TCA 90 bp | CAGACCAGGCCAGAAGCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTGACTCCAAGTCATGGTaGCAGAACCTTCCAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: QTRPEAMCVSLGLCLSLSDSKSW*QNLPET Trigger: GGTTTCTGGAAGGTTCTGTCACCATGACTTGGAGTC...AGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGCTTCTGGCCTGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCTGATTCCAAAGAAGAATCTGGGATCTGGAGAGTGTCACCTTACCCTGCCGGGACAGCAGGAAAGTaGCACCCTGGAAATCATACA | + |
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Preference number: 2 (lower is better) Translates to: GPDSKEESGIWRVSPYPAGTAGK*HPGNHT Trigger: TGTATGATTTCCAGGGTGTCACTTTCCTGCTGTCCC...GGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCTTTGGAATCAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCAGATTAGACTTCATGACATGGTCAGACACATCTCCGAGATGCCCAATCCTCTCTCTCTCTCTCTaGAAGACTTTTCAGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QLRLDFMTWSDTSPRCPILSLSL*KTFQSA Trigger: GGCTGACTGAAAAGTCTTTCAGAGAGAGAGAGAGAG...GATTGGGCATCTCGGAGATGTGTCTGACCATGTCATGAAGTCTAATCTGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCAGATTAGACTTCATGACATGGTCAGACACATCTCCGAGATGCCCAATCAGGAAAGTGACACCCTaGAAATCATACATGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QLRLDFMTWSDTSPRCPIRKVTP*KSYMAP Trigger: GGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCT...GATTGGGCATCTCGGAGATGTGTCTGACCATGTCATGAAGTCTAATCTGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAGGTGAGTCTATCAGGTaGCTCCAAGTCATGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKGESIR*LQVMVT Trigger: TGTCACCATGACTTGGAGTCACCTGATAGACTCACC...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTAAACAGAATTGACCTTGTGTGGCATGCTGTGGCCACCTCTTCAGCTCAGTTCTCCAGTAGGACCTaGTTCCAAAGAAGAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: ILNRIDLVWHAVATSSAQFSSRT*FQRRIW Trigger: CCAGATTCTTCTTTGGAATCAGGTCCTACTGGAGAA...CTGAGCTGAAGAGGTGGCCACAGCATGCCACACAAGGTCAATTCTGTTTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR CCA 72 bp | CCTGCCAGACCAGGCCAGAAGCCATGTGTGTGTCTCTaGGTCTCTGTCTCTCTCTCTCTCTCTCTGAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PARPGQKPCVCL*VSVSLSLSLKD Trigger: GTCTTTCAGAGAGAGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGCTTCTGGCCTGGTCTGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR GCA 72 bp | ATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTaGCTTTTAAGTCCCACCAGGTTGGTGAGTCTATCA | + |
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Preference number: 3 (lower is better) Translates to: MAPCCSPEPPMQ*LLSPTRLVSLS Trigger: TGATAGACTCACCAACCTGGTGGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR GCA 72 bp | AGAAGAATCTGGGATCTGGAGAGTGTCACCTTACCCTaGCAGACCAGGCCAGAAGCCATGTGTGTGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RRIWDLESVTLP*QTRPEAMCVSL Trigger: CAGAGACACACACATGGCTTCTGGCCTGGTCTGGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR CCA 72 bp | TACTCACACCTAGGGGACAGCAGGAAAGTGACACCCTaGAAATCATACATGGCTCCCTGCTGTTCCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: YSHLGDSRKVTP*KSYMAPCCSPE Trigger: CTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCTGCTGTCCCCTAGGTGTGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR CCA 72 bp | CCAGTAGGACCTGATTCCAAAGAAGAATCTGGGATCTaGAGAGTGTCACCTTACCCTGCCAGACCAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PVGPDSKEESGI*RVSPYPARPGQ Trigger: CTGGCCTGGTCTGGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCTTTGGAATCAGGTCCTACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR GCA 72 bp | AGGAAAGTGACACCCTGGAAATCATACATGGCTCCCTaGTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: RKVTPWKSYMAP*CSPEPPMQCLL Trigger: TAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR TCA 72 bp | CCTTTTAAGTCCCACCAGGTTGGTGAGTCTATCAGGTaGCTCCAAGTCATGGTGACAGAACCTTCCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: PFKSHQVGESIR*LQVMVTEPSRN Trigger: GTTTCTGGAAGGTTCTGTCACCATGACTTGGAGTCACCTGATAGACTCACCAACCTGGTGGGACTTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| 3UTR TCA 72 bp | CTGCATGAAGACAGTTTACAAAGCACCTTAATACAGTaGTTCGGGTCTTCACATCAGACGGCACCGTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LHEDSLQSTLIQ*FGSSHQTAPCA Trigger: TGCACACGGTGCCGTCTGATGTGAAGACCCGAATCACTGTATTAAGGTGCTTTGTAAACTGTCTTCATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | CCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCAGTCACCAGGCCTCCTaGCGGGGTACACACCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PGNHTWLPAVPQSHLCSASHQAS*RGTHPC Trigger: ACAGGGGTGTGTACCCCGGCAGGAGGCCTGGTGACT...GGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | CCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCGAGGCCGTACTGGGGTaGGAGTCCAGCCACTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGNHTWLPAVPQSHLCSAEAVLG*ESSHFC Trigger: GCAGAAGTGGCTGGACTCCCACCCCAGTACGGCCTC...GGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | TACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAAGTCCCACACCAGCCCACGGCTaGACTTCACGGCAAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YMAPCCSPEPPMQCLLSPTPAHG*TSRQGA Trigger: TGCCCCTTGCCGTGAAGTTCAGCCGTGGGCTGGTGT...GGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | AGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGAGTCCAGCCACTTCTaGATAGGCCAGGGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SDTLEIIHGSLLFPRATYESSHF*IGQGLG Trigger: CCCCAGGCCCTGGCCTATGCAGAAGTGGCTGGACTC...ATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | GAAAGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCCATTGCGAGCTGTTGTaGCAGTCCACACCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ESDTLEIIHGSLLFPRATHCELL*QSTPAH Trigger: GTGGGCTGGTGTGGACTGTCACAACAGCTCGCAATG...GGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCAGCCCCATGGCCAGCTaGATACACCCAGACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QESDTLEIIHGSLLFPRASPMAS*IHPDRK Trigger: CTTCCTGTCTGGGTGTATCCAGCTGGCCATGGGGCT...GGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | TACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAAGTCCCAATGCAGGAGCCCCATaGCCAGCTGGATACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: YMAPCCSPEPPMQCLLSPNAGAP*PAGYTQ Trigger: CTGGGTGTATCCAGCTGGCCATGGGGCTCCTGCATT...GGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | TACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAAGTCCCAGCCCAGCACATTGGTaGGGCCAATGGCCAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: YMAPCCSPEPPMQCLLSPSPAHW*GQWPVV Trigger: AACTACTGGCCATTGGCCTCACCAATGTGCTGGGCT...GGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | GGACCTGATTCCAAAGAAGAATCTGGGATCTGGAGAGTGTCACCTTACCCTGCCCCGGCCCCCATGTCCTaGACCATCTCAGAGAACGAG | + |
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Preference number: 4 (lower is better) Translates to: GPDSKEESGIWRVSPYPAPAPMS*TISENE Trigger: CTCGTTCTCTGAGATGGTGCAGGACATGGGGGCCGG...GGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCTTTGGAATCAGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | GGACCTGATTCCAAAGAAGAATCTGGGATCTGGAGAGTGTCACCTTACCCTGCCGCCCAAAGCTGCCAGTaGCTGGGTAAGAGGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: GPDSKEESGIWRVSPYPAAQSCQ*LGKRRR Trigger: TCGTCTCCTCTTACCCAGTCACTGGCAGCTTTGGGC...GGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCTTTGGAATCAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | TACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAAGTCCCTCACATCCCGGGAGGTaGCCAGGAAGAAATACACGA | + |
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Preference number: 4 (lower is better) Translates to: YMAPCCSPEPPMQCLLSPSHPGR*PGRNTR Trigger: TCGTGTATTTCTTCCTGGGCACCTCCCGGGATGTGA...GGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | GAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAGGGGCATCTCAGGATaGGGAGGAGGCATGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EIIHGSLLFPRATYAVPFRGISG*GGGMCS Trigger: GGAACACATGCCTCCTCCCCATCCTGAGATGCCCCT...AAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | GAAAGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCAAAGCTGCCAGTGACTaGGTAAGAGGAGACGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ESDTLEIIHGSLLFPRATKAASD*VRGDEG Trigger: TCCCTCGTCTCCTCTTACCCAGTCACTGGCAGCTTT...GGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | CAGACCAGGCCAGAAGCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTCAGCCAGGGCAGACTTaGGGATATAGGAGAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: QTRPEAMCVSLGLCLSLSQPGQT*GYRRRV Trigger: CACTCTTCTCCTATATCCCCAAGTCTGCCCTGGCTG...AGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGCTTCTGGCCTGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | ACTCCAAGTCATGGTGACAGAACCTTCCAGAAACCCTTCCTATACCATCTGCTCAACCGCGGAACGTGGTaGGGATGCTTCCAGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TPSHGDRTFQKPFLYHLLNRGTW*GCFQCP Trigger: CGGGCACTGGAAGCATCCCCACCACGTTCCGCGGTT...GAGCAGATGGTATAGGAAGGGTTTCTGGAAGGTTCTGTCACCATGACTTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | CCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCGTTGGGCTCAGTTCCTaGTTCCTGCTGCAGGAATTT | + |
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Preference number: 4 (lower is better) Translates to: PGNHTWLPAVPQSHLCSAVGLSS*FLLQEF Trigger: AAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAAC...GGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | GAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTTGTCCTTCTGACACCTaGGTCTTGGGCCTAGCTACC | + |
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Preference number: 4 (lower is better) Translates to: EIIHGSLLFPRATYAVPFCPSDT*VLGLAT Trigger: GGTAGCTAGGCCCAAGACTCAGGTGTCAGAAGGACA...AAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCTCAGTTCCTGGTTCCTaGTGCAGGAATTTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QESDTLEIIHGSLLFPRASVPGS*CRNFSA Trigger: GGCTGAGAAATTCCTGCAGCAGGAACCAGGAACTGA...GGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCATGTGGAGGAAGGTGTaGTACACCTGGAGGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: QESDTLEIIHGSLLFPRAMWRKV*YTWRKN Trigger: GTTCTTCCTCCAGGTGTACCACACCTTCCTCCACAT...GGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | GCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTCTCTCTGAAAGACTTGTACACACCCCTGTCTaGGCATTCACAGCTGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: AMCVSLGLCLSLSLSERLVHTPV*AFTAVR Trigger: GCGGACAGCTGTGAATGCCCAGACAGGGGTGTGTAC...AAGTCTTTCAGAGAGAGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | TACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAAGTCCCCTTCATGGATGCTGTTaGGCTCAGTTCCTGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YMAPCCSPEPPMQCLLSPLHGCC*AQFLVP Trigger: AGGAACCAGGAACTGAGCCCAACAGCATCCATGAAG...GGGACTTAAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | GGACCTGATTCCAAAGAAGAATCTGGGATCTGGAGAGTGTCACCTTACCCTGCCGGCCTAGCTACCGAGTaGAGGAGAATGAGCAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GPDSKEESGIWRVSPYPAGLATE*RRMSKD Trigger: GTCTTTGCTCATTCTCCTGCACTCGGTAGCTAGGCC...GGCAGGGTAAGGTGACACTCTCCAGATCCCAGATTCTTCTTTGGAATCAGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGAAAGACTTTTCAGTCAGCCCAGCCCTCAAATACTCACACCTAGGGGACCTGGTCTCTCCGATGTaGAGGAAGGTGTGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: SLKDFSVSPALKYSHLGDLVSPM*RKVWYT Trigger: GGTGTACCACACCTTCCTCCACATCGGAGAGACCAG...GTCCCCTAGGTGTGAGTATTTGAGGGCTGGGCTGACTGAAAAGTCTTTCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | CAGACCAGGCCAGAAGCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTGGAGCTCCTTTGCTCTaGAACAGCATCTTCATGGAT | + |
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Preference number: 4 (lower is better) Translates to: QTRPEAMCVSLGLCLSLSGAPLL*NSIFMD Trigger: ATCCATGAAGATGCTGTTCCAGAGCAAAGGAGCTCC...AGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGCTTCTGGCCTGGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | CAGCTCAGATTAGACTTCATGACATGGTCAGACACATCTCCGAGATGCCCAATCACACGAAGCATCCCATaGAGGCAGAGTAGAGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: QLRLDFMTWSDTSPRCPITRSIP*RQSRGR Trigger: ACGGCCTCTACTCTGCCTTCATGGGATGCTTCGTGT...GATTGGGCATCTCGGAGATGTGTCTGACCATGTCATGAAGTCTAATCTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | CAGACCAGGCCAGAAGCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTGATATAGGAGAAGAGTaGGGTCAAGTAGTTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QTRPEAMCVSLGLCLSLSDIGEE*GQVVQG Trigger: TCCCTGAACTACTTGACCTCACTCTTCTCCTATATC...AGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGCTTCTGGCCTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | CAGCTCAGATTAGACTTCATGACATGGTCAGACACATCTCCGAGATGCCCAATCCCGAGTGCAGGAGAATaGGCAAAGACACCAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: QLRLDFMTWSDTSPRCPIPSAGE*AKTPGY Trigger: GTAGCCTGGTGTCTTTGCTCATTCTCCTGCACTCGG...GATTGGGCATCTCGGAGATGTGTCTGACCATGTCATGAAGTCTAATCTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | CAGGAAAGTGACACCCTGGAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCAAAAATTTGTCCTTCTaGCACCTGAGTCTTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QESDTLEIIHGSLLFPRAKNLSF*HLSLGP Trigger: AGGCCCAAGACTCAGGTGTCAGAAGGACAAATTTTT...GGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTCCAGGGTGTCACTTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | GCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTCTCTCTGAAAGACTTAGGCCGCTGGCCGGCTaGAGAACAAAAATTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AMCVSLGLCLSLSLSERLRPLAG*RTKICP Trigger: AGGACAAATTTTTGTTCTTCAGCCGGCCAGCGGCCT...AAGTCTTTCAGAGAGAGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAGGCCGGAGGGAGACTTaGGCAGGGAGCTCCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKGRRET*AGSSFA Trigger: AGCAAAGGAGCTCCCTGCTCAAGTCTCCCTCCGGCC...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAAGCAGGAACCCCAAATaGAGGAGCCCCATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKSRNPK*RSPMAS Trigger: GCTGGCCATGGGGCTCCTGCATTTGGGGTTCCTGCT...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | GCCATGTGTGTGTCTCTGGGTCTCTGTCTCTCTCTCTCTCTCTCTGAAAGACTTTGTAGTCTACACTGCTaGTATGCGTGCACTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AMCVSLGLCLSLSLSERLCSLHC*YACTPE Trigger: TTCTGGAGTGCACGCATATCAGCAGTGTAGACTACA...AAGTCTTTCAGAGAGAGAGAGAGAGAGACAGAGACCCAGAGACACACACATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR TCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAAGTAACGGAACCCCTTaGGGTCAGCGGCCAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKSNGTP*GQRPTV Trigger: CACTGTTGGCCGCTGACCTCAAGGGGTTCCGTTACT...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAAAGGTGTGGTACACCTaGAGGAAGAACTGCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKKVWYT*RKNCRG Trigger: CCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTT...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR GCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAATCGGAGGGCATCAATTaGAGGGAAGTACAGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKSEGIN*REVQAA Trigger: AGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGA...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAGAGACGCGAAGGATTTaGCCACGGCAATGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKETRRI*PRQCSP Trigger: TGGAGAGCATTGCCGTGGCCAAATCCTTCGCGTCTC...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | ACTCCAAGTCATGGTGACAGAACCTTCCAGAAACCCTTCCTATACCATCTGCTCGGAACAGCATCTTCATaGATGCTGTTGGGCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPSHGDRTFQKPFLYHLLGTASS*MLLGSV Trigger: AACTGAGCCCAACAGCATCCATGAAGATGCTGTTCC...GAGCAGATGGTATAGGAAGGGTTTCTGGAAGGTTCTGTCACCATGACTTGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CCA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAATGGTCTTATTGTCCCTaGTCACTGAGAAGGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKWSYCP*SLRRVG Trigger: TCCCACCCTTCTCAGTGACCAGGGACAATAAGACCA...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | GAGGCCAGTCCGAGGACAGCGTCGCCTACCCTGGTCTCTCCGATGTaGAGGAAGGTGTGGTACACCTGGAGGAAGAACTGCCGGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: EASPRTASPTLVSPM*RKVWYTWRKNCRGI Trigger: AATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGACGCTGTCCTCGGACTGGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 90 bp | AACCGCGGAACGTGGTGGGGATGCTTCCAGTGCCCGGTTCGTTATTaGCTCTCGGAGGGCATCAATTGCAGGGAAGTACAGGCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRGTWWGCFQCPVRY*LSEGINCREVQAAG Trigger: GCCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCACTGGAAGCATCCCCACCACGTTCCGCGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | GCAGCAGCAACATGGAGGCCAGTCCGAGGACAGCGTCGCCTACCCTaGTCTCTCCGATGTGGAGGAAGGTGTGGTACACCTGGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAATWRPVRGQRRLP*SLRCGGRCGTPGGR Trigger: TCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGACGCTGTCCTCGGACTGGCCTCCATGTTGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | CACACCAGCCCACGGCTGAACTTCACGGCAAGGGGCATCTCAGGATaGGGAGGAGGCATGTGTTCCCGCATACACTTCAGCACAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTSPRLNFTARGISG*GGGMCSRIHFSTSS Trigger: GCTGCTTGTGCTGAAGTGTATGCGGGAACACATGCCTCCTCCCCATCCTGAGATGCCCCTTGCCGTGAAGTTCAGCCGTGGGCTGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | CCATGTCCTGCACCATCTCAGAGAACGAGATGGTCTTATTGTCCCTaGTCACTGAGAAGGGTGGGATCCGCACCGGAGGGAGCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PCPAPSQRTRWSYCP*SLRRVGSAPEGAPR Trigger: CCGAGGGGCTCCCTCCGGTGCGGATCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGCAGGACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | CAGCCAGTCCGGCCCCCATGTCCTGCACCATCTCAGAGAACGAGATaGTCTTATTGTCCCTGGTCACTGAGAAGGGTGGGATCCGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: QPVRPPCPAPSQRTR*SYCPWSLRRVGSAP Trigger: CGGTGCGGATCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGCAGGACATGGGGGCCGGACTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | CCCTGTCTGGGCATTCACAGCTGTCCGCCCAAAGCTGCCAGTGACTaGGTAAGAGGAGACGAGGGAGCCCAGCACATTGGTGAGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCLGIHSCPPKAASD*VRGDEGAQHIGEAN Trigger: ATTGGCCTCACCAATGTGCTGGGCTCCCTCGTCTCCTCTTACCCAGTCACTGGCAGCTTTGGGCGGACAGCTGTGAATGCCCAGACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 90 bp | CTGCACCATCTCAGAGAACGAGATGGTCTTATTGTCCCTGGTCACTaGGAAGGGTGGGATCCGCACCGGAGGGAGCCCCTCGGCGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHHLRERDGLIVPGH*EGWDPHRREPLGDL Trigger: AAGATCGCCGAGGGGCTCCCTCCGGTGCGGATCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 90 bp | CCAGGAGCTCACCGAGTCCCACGATCACGGTGTAGTCTACACTGCTaGTATGCGTGCACTCCAGAACCGCGGAACGTGGTGGGGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGAHRVPRSRCSLHC*YACTPEPRNVVGML Trigger: AAGCATCCCCACCACGTTCCGCGGTTCTGGAGTGCACGCATATCAGCAGTGTAGACTACACCGTGATCGTGGGACTCGGTGAGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | AGGACAGCGTCGCCTACCCTGGTCTCTCCGATGTGGAGGAAGGTGTaGTACACCTGGAGGAAGAACTGCCGGGGGATTTTCTGCAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTASPTLVSPMWRKV*YTWRKNCRGIFCNP Trigger: GGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGACGCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 90 bp | TCACATCCCGGGAGGTGCCCAGGAAGAAATACACGAAGCATCCCATaGAGGCAGAGTAGAGGCCGTACTGGGGTGGGAGTCCAGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SHPGRCPGRNTRSIP*RQSRGRTGVGVQPL Trigger: AAGTGGCTGGACTCCCACCCCAGTACGGCCTCTACTCTGCCTTCATGGGATGCTTCGTGTATTTCTTCCTGGGCACCTCCCGGGATGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 90 bp | ACTGCTGATATGCGTGCACTCCAGAACCGCGGAACGTGGTGGGGATaGTTCCAGTGCCCGGTTCGTTATTGCCTCTCGGAGGGCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TADMRALQNRGTWWG*FQCPVRYCLSEGIN Trigger: ATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCACTGGAAGCATCCCCACCACGTTCCGCGGTTCTGGAGTGCACGCATATCAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | TCGCCTACCCTGGTCTCTCCGATGTGGAGGAAGGTGTGGTACACCTaGAGGAAGAACTGCCGGGGGATTTTCTGCAATCCCAGCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPTLVSPMWRKVWYT*RKNCRGIFCNPSRF Trigger: GAACCTGCTGGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | CCTCTGAACGCGCCAGAGACTCCTGAAGATCTTGACATCAAAGAGTaGGGTCACAGCCGTGATGATCACGGCAGCCAGGGCAGACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLNAPETPEDLDIKE*GHSRDDHGSQGRLG Trigger: CCCAAGTCTGCCCTGGCTGCCGTGATCATCACGGCTGTGACCCCACTCTTTGATGTCAAGATCTTCAGGAGTCTCTGGCGCGTTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | GTAGTCTACACTGCTGATATGCGTGCACTCCAGAACCGCGGAACGTaGTGGGGATGCTTCCAGTGCCCGGTTCGTTATTGCCTCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVYTADMRALQNRGT*WGCFQCPVRYCLSE Trigger: CTCCGAGAGGCAATAACGAACCGGGCACTGGAAGCATCCCCACCACGTTCCGCGGTTCTGGAGTGCACGCATATCAGCAGTGTAGACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGAAAGACTTTTCAGTCAGCCCAGCCCTCAAATACTCACACCTAGGGGACGGGCCGGAGGGAGACTaGAGCAGGGAGCTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SLKDFSVSPALKYSHLGDGPEGD*SRELLC Trigger: GCAAAGGAGCTCCCTGCTCAAGTCTCCCTCCGGCCC...GTCCCCTAGGTGTGAGTATTTGAGGGCTGGGCTGACTGAAAAGTCTTTCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | AGGAGAATGAGCAAAGACACCAGGCTACCGGCCAGGATACCGTACTaGATCTCCCAGAAGGACAGCAGGAACGTCACACACAGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRMSKDTRLPARIPY*ISQKDSRNVTHSGS Trigger: GCTACCACTGTGTGTGACGTTCCTGCTGTCCTTCTGGGAGATCCAGTACGGTATCCTGGCCGGTAGCCTGGTGTCTTTGCTCATTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CAA 90 bp | GAAATCATACATGGCTCCCTGCTGTTCCCCAGAGCCACCTATGCAGTGCCTTTTAGGGAGCCCAGCACATaGGTGAGGCCAATGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EIIHGSLLFPRATYAVPFREPST*VRPMAS Trigger: ACTGGCCATTGGCCTCACCAATGTGCTGGGCTCCCT...AAAAGGCACTGCATAGGTGGCTCTGGGGAACAGCAGGGAGCCATGTATGATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 90 bp | GTCTCTCCGATGTGGAGGAAGGTGTGGTACACCTGGAGGAAGAACTaGCGGGGGATTTTCTGCAATCCCAGCAGGTTCTTGATCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSPMWRKVWYTWRKN*RGIFCNPSRFLICP Trigger: TGGACAGATCAAGAACCTGCTGGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 90 bp | TGCTTCCAGTGCCCGGTTCGTTATTGCCTCTCGGAGGGCATCAATTaGAGGGAAGTACAGGCCGCTGGCCGGCTGAAGAACAAAAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFQCPVRYCLSEGIN*REVQAAGRLKNKNL Trigger: CAAATTTTTGTTCTTCAGCCGGCCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCACTGGAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | GCAGGGAGCTCCTTTGCTCTGGAACAGCATCTTCATGGATGCTGTTaGGCTCAGTTCCTGGTTCCTGCTGCAGGAATTTCTCAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSSFALEQHLHGCC*AQFLVPAAGISQPP Trigger: AGGAGGCTGAGAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGAGCTCCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | TTGCTCTGGAACAGCATCTTCATGGATGCTGTTGGGCTCAGTTCCTaGTTCCTGCTGCAGGAATTTCTCAGCCTCCTCCAGAGTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLWNSIFMDAVGLSS*FLLQEFLSLLQSGE Trigger: TTCACCACTCTGGAGGAGGCTGAGAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 90 bp | AGGAAGGTGTGGTACACCTGGAGGAAGAACTGCCGGGGGATTTTCTaGAATCCCAGCAGGTTCTTGATCTGTCCAAAGCCAATTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKVWYTWRKNCRGIF*NPSRFLICPKPIVM Trigger: CATCACAATTGGCTTTGGACAGATCAAGAACCTGCTGGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 90 bp | TTATTGCCTCTCGGAGGGCATCAATTGCAGGGAAGTACAGGCCGCTaGCCGGCTGAAGAACAAAAATTTGTCCTTCTGACACCTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPLGGHQLQGSTGR*PAEEQKFVLLTPES Trigger: AGACTCAGGTGTCAGAAGGACAAATTTTTGTTCTTCAGCCGGCCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CAA 90 bp | ATTTTAAACAGAATTGACCTTGTGTGGCATGCTGTGGCCACCTCTTCAGCTCAGGAGACCACCAGGGCATaGCGAGCTGTTGTGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILNRIDLVWHAVATSSAQETTRA*RAVVTV Trigger: GACTGTCACAACAGCTCGCAATGCCCTGGTGGTCTC...CTGAGCTGAAGAGGTGGCCACAGCATGCCACACAAGGTCAATTCTGTTTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS-3UTR CAA 90 bp | ATCTCCGAGATGCCCAATCTCTTTGATTTTTCTCCAGTAGGACCTGATTCCAAAAGACTCCTGAAGATCTaGACATCAAAGAGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISEMPNLFDFSPVGPDSKRLLKI*TSKSGV Trigger: GACCCCACTCTTTGATGTCAAGATCTTCAGGAGTCT...TTTGGAATCAGGTCCTACTGGAGAAAAATCAAAGAGATTGGGCATCTCGGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 90 bp | CCGGCCCCCATGTCCTGCACCATCTCAGAGAACGAGATGGTCTTATaGTCCCTGGTCACTGAGAAGGGTGGGATCCGCACCGGAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PAPMSCTISENEMVL*SLVTEKGGIRTGGS Trigger: GCTCCCTCCGGTGCGGATCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGCAGGACATGGGGGCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 90 bp | GAACCGCGGAACGTGGTGGGGATGCTTCCAGTGCCCGGTTCGTTATaGCCTCTCGGAGGGCATCAATTGCAGGGAAGTACAGGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EPRNVVGMLPVPGSL*PLGGHQLQGSTGRW Trigger: CCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCACTGGAAGCATCCCCACCACGTTCCGCGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | CCGAGGACAGCGTCGCCTACCCTGGTCTCTCCGATGTaGAGGAAGGTGTGGTACACCTGGAGGAAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRTASPTLVSPM*RKVWYTWRKNC Trigger: GCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGACGCTGTCCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | ACATGGAGGCCAGTCCGAGGACAGCGTCGCCTACCCTaGTCTCTCCGATGTGGAGGAAGGTGTGGTACACCT | + |
|
Preference number: 6 (lower is better) Translates to: TWRPVRGQRRLP*SLRCGGRCGTP Trigger: AGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGACGCTGTCCTCGGACTGGCCTCCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 72 bp | TCTGGGCATTCACAGCTGTCCGCCCAAAGCTGCCAGTaGCTGGGTAAGAGGAGACGAGGGAGCCCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SGHSQLSAQSCQ*LGKRRRGSPAH Trigger: ATGTGCTGGGCTCCCTCGTCTCCTCTTACCCAGTCACTGGCAGCTTTGGGCGGACAGCTGTGAATGCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 72 bp | TGCCCGGTTCGTTATTGCCTCTCGGAGGGCATCAATTaGAGGGAAGTACAGGCCGCTGGCCGGCTGAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CPVRYCLSEGIN*REVQAAGRLKN Trigger: GTTCTTCAGCCGGCCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 72 bp | CAGGGGCCGGAGGGAGACTTGAGCAGGGAGCTCCTTTaGTCTGGAACAGCATCTTCATGGATGCTGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGPEGDLSRELL*SGTASSWMLLG Trigger: GCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGAGCTCCCTGCTCAAGTCTCCCTCCGGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | CCACGGCTGAACTTCACGGCAAGGGGCATCTCAGGATaGGGAGGAGGCATGTGTTCCCGCATACACTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRLNFTARGISG*GGGMCSRIHFS Trigger: GCTGAAGTGTATGCGGGAACACATGCCTCCTCCCCATCCTGAGATGCCCCTTGCCGTGAAGTTCAGCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | GGCATTCACAGCTGTCCGCCCAAAGCTGCCAGTGACTaGGTAAGAGGAGACGAGGGAGCCCAGCACATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GIHSCPPKAASD*VRGDEGAQHIG Trigger: ACCAATGTGCTGGGCTCCCTCGTCTCCTCTTACCCAGTCACTGGCAGCTTTGGGCGGACAGCTGTGAATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 72 bp | GTGCCCGGTTCGTTATTGCCTCTCGGAGGGCATCAATaGCAGGGAAGTACAGGCCGCTGGCCGGCTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPGSLLPLGGHQ*QGSTGRWPAEE Trigger: TTCTTCAGCCGGCCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 72 bp | GGGAGGTGCCCAGGAAGAAATACACGAAGCATCCCATaGAGGCAGAGTAGAGGCCGTACTGGGGTGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GRCPGRNTRSIP*RQSRGRTGVGV Trigger: GACTCCCACCCCAGTACGGCCTCTACTCTGCCTTCATGGGATGCTTCGTGTATTTCTTCCTGGGCACCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 72 bp | CACCGAGTCCCACGATCACGGTGTAGTCTACACTGCTaGTATGCGTGCACTCCAGAACCGCGGAACGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HRVPRSRCSLHC*YACTPEPRNVV Trigger: CACCACGTTCCGCGGTTCTGGAGTGCACGCATATCAGCAGTGTAGACTACACCGTGATCGTGGGACTCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | TCGCCTACCCTGGTCTCTCCGATGTGGAGGAAGGTGTaGTACACCTGGAGGAAGAACTGCCGGGGGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPTLVSPMWRKV*YTWRKNCRGIF Trigger: GAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAGGGTAGGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | GCGCCAGAGACTCCTGAAGATCTTGACATCAAAGAGTaGGGTCACAGCCGTGATGATCACGGCAGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: APETPEDLDIKE*GHSRDDHGSQG Trigger: GCCCTGGCTGCCGTGATCATCACGGCTGTGACCCCACTCTTTGATGTCAAGATCTTCAGGAGTCTCTGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 72 bp | TCAGGGGCCGGAGGGAGACTTGAGCAGGGAGCTCCTTaGCTCTGGAACAGCATCTTCATGGATGCTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGAGGRLEQGAP*LWNSIFMDAVG Trigger: CCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGAGCTCCCTGCTCAAGTCTCCCTCCGGCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | CTGGTCTCTCCGATGTGGAGGAAGGTGTGGTACACCTaGAGGAAGAACTGCCGGGGGATTTTCTGCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: LVSPMWRKVWYT*RKNCRGIFCNP Trigger: GGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACATCGGAGAGACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | GCACCATCTCAGAGAACGAGATGGTCTTATTGTCCCTaGTCACTGAGAAGGGTGGGATCCGCACCGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: APSQRTRWSYCP*SLRRVGSAPEG Trigger: TCCCTCCGGTGCGGATCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | CGGCCCCCATGTCCTGCACCATCTCAGAGAACGAGATaGTCTTATTGTCCCTGGTCACTGAGAAGGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RPPCPAPSQRTR*SYCPWSLRRVG Trigger: TCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGCAGGACATGGGGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | AGCAAAGACACCAGGCTACCGGCCAGGATACCGTACTaGATCTCCCAGAAGGACAGCAGGAACGTCACACAC | + |
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Preference number: 6 (lower is better) Translates to: SKDTRLPARIPY*ISQKDSRNVTH Trigger: GTGTGTGACGTTCCTGCTGTCCTTCTGGGAGATCCAGTACGGTATCCTGGCCGGTAGCCTGGTGTCTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | GCCGGAGGGAGACTTGAGCAGGGAGCTCCTTTGCTCTaGAACAGCATCTTCATGGATGCTGTTGGGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: AGGRLEQGAPLL*NSIFMDAVGLS Trigger: ACTGAGCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGAGCTCCCTGCTCAAGTCTCCCTCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 72 bp | GCCGCTGGCCGGCTGAAGAACAAAAATTTGTCCTTCTaGCACCTGAGTCTTGGGCCTAGCTACCGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AAGRLKNKNLSF*HLSLGPSYRVQ Trigger: CTGCACTCGGTAGCTAGGCCCAAGACTCAGGTGTCAGAAGGACAAATTTTTGTTCTTCAGCCGGCCAGCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | AGCAGGGAGCTCCTTTGCTCTGGAACAGCATCTTCATaGATGCTGTTGGGCTCAGTTCCTGGTTCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRELLCSGTASS*MLLGSVPGSCC Trigger: GCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGAGCTCCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 72 bp | ATGTGGAGGAAGGTGTGGTACACCTGGAGGAAGAACTaGCGGGGGATTTTCTGCAATCCCAGCAGGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: MWRKVWYTWRKN*RGIFCNPSRFL Trigger: CAAGAACCTGCTGGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCACACCTTCCTCCACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 72 bp | TCATGGATGCTGTTGGGCTCAGTTCCTGGTTCCTGCTaGAGGAATTTCTCAGCCTCCTCCAGAGTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SWMLLGSVPGSC*RNFSASSRVVK Trigger: CTTCACCACTCTGGAGGAGGCTGAGAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 72 bp | TCTTCATGGATGCTGTTGGGCTCAGTTCCTGGTTCCTaGTGCAGGAATTTCTCAGCCTCCTCCAGAGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSWMLLGSVPGS*CRNFSASSRVV Trigger: CACCACTCTGGAGGAGGCTGAGAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 72 bp | ATGTCCTGCACCATCTCAGAGAACGAGATGGTCTTATaGTCCCTGGTCACTGAGAAGGGTGGGATCCGCACC | + |
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Preference number: 6 (lower is better) Translates to: MSCTISENEMVL*SLVTEKGGIRT Trigger: GGTGCGGATCCCACCCTTCTCAGTGACCAGGGACAATAAGACCATCTCGTTCTCTGAGATGGTGCAGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 90 bp | ATGCTTCCAGTGCCCGGTTCGTTATTGCCTCTCGGAGGGCATCAATaGCAGGGAAGTACAGGCCGCTGGCCGGCTGAAGAACAAAAATTT | + |
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Preference number: 6 (lower is better) Translates to: MLPVPGSLLPLGGHQ*QGSTGRWPAEEQKF Trigger: AAATTTTTGTTCTTCAGCCGGCCAGCGGCCTGTACTTCCCTGCAATTGATGCCCTCCGAGAGGCAATAACGAACCGGGCACTGGAAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS TCA 72 bp | AGGAACGTCACACACAGTGGTAGCAGATCCAGCCTCTaGACGCGCCAGAGACTCCTGAAGATCTTGACATCA | + |
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Preference number: 6 (lower is better) Translates to: RNVTHSGSRSSL*TRQRLLKILTS Trigger: TGATGTCAAGATCTTCAGGAGTCTCTGGCGCGTTCAGAGGCTGGATCTGCTACCACTGTGTGTGACGTTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS GCA 72 bp | TGGTACACCTGGAGGAAGAACTGCCGGGGGATTTTCTaGAATCCCAGCAGGTTCTTGATCTGTCCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: WYTWRKNCRGIF*NPSRFLICPKP Trigger: TGGCTTTGGACAGATCAAGAACCTGCTGGGATTGCAGAAAATCCCCCGGCAGTTCTTCCTCCAGGTGTACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | AACAGCATCTTCATGGATGCTGTTGGGCTCAGTTCCTaGTTCCTGCTGCAGGAATTTCTCAGCCTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: NSIFMDAVGLSS*FLLQEFLSLLQ Trigger: CTGGAGGAGGCTGAGAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGATGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 72 bp | AACTGCCGGGGGATTTTCTGCAATCCCAGCAGGTTCTaGATCTGTCCAAAGCCAATTGTGATGCTGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: NCRGIFCNPSRF*ICPKPIVMLAA Trigger: CGCTGCCAGCATCACAATTGGCTTTGGACAGATCAAGAACCTGCTGGGATTGCAGAAAATCCCCCGGCAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CAA 72 bp | CTCCTTTGCTCTGGAACAGCATCTTCATGGATGCTGTaGGGCTCAGTTCCTGGTTCCTGCTGCAGGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: LLCSGTASSWML*GSVPGSCCRNF Trigger: GAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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| CDS CCA 72 bp | TCCTTTGCTCTGGAACAGCATCTTCATGGATGCTGTTaGGCTCAGTTCCTGGTTCCTGCTGCAGGAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SFALEQHLHGCC*AQFLVPAAGIS Trigger: AGAAATTCCTGCAGCAGGAACCAGGAACTGAGCCCAACAGCATCCATGAAGATGCTGTTCCAGAGCAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050880.8 |
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