Pregenerated sensors for SLC25A54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027880Ensembl transcript IDs: ENSMUST00000029478.5, ENSMUST00000159926.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCATCGACCCGTCAAAATCCATGCTTTTCAAGATGTCTTTGGCCTaGGAGAGAGAAATGTGGATTCCCAATGATCTCACGGCAGCGACT | + |
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Preference number: 1 (lower is better) Translates to: VIDPSKSMLFKMSLA*EREMWIPNDLTAAT Trigger: AGTCGCTGCCGTGAGATCATTGGGAATCCACATTTCTCTCTCTCAGGCCAAAGACATCTTGAAAAGCATGGATTTTGACGGGTCGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR GCA 90 bp | GAATCAGTGGAAAACTGGCTAACTGGCCACAAGTGTGTGACACTGTaGTACAACCCAGCACAATTGCTATTCCAGGATTCACCGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: ESVENWLTGHKCVTL*YNPAQLLFQDSPSF Trigger: GAAACTCGGTGAATCCTGGAATAGCAATTGTGCTGGGTTGTAGCACAGTGTCACACACTTGTGGCCAGTTAGCCAGTTTTCCACTGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR CCA 90 bp | CTACTGTCATCGACCCGTCAAAATCCATGCTTTTCAAGATGTCTTTaGCCTGAGAGAGAGAAATGTGGATTCCCAATGATCTCACGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LLSSTRQNPCFSRCL*PEREKCGFPMISRQ Trigger: CTGCCGTGAGATCATTGGGAATCCACATTTCTCTCTCTCAGGCCAAAGACATCTTGAAAAGCATGGATTTTGACGGGTCGATGACAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR TCA 90 bp | CTTTTTCTTTTTAGGAAGAAGCAAGATCACCATCTAGCCCAGGTGTaGTCTGATACCTTGGTGATGATGGCAATGATGACAGTTTGGTAT | + |
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Preference number: 1 (lower is better) Translates to: LFLFRKKQDHHLAQV*SDTLVMMAMMTVWY Trigger: ATACCAAACTGTCATCATTGCCATCATCACCAAGGTATCAGATCACACCTGGGCTAGATGGTGATCTTGCTTCTTCCTAAAAAGAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029478.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAATGAGCTGCATCATGCGCACTGTTTCCTTTTCCAGCATGACAGCCTGCATCATAGGCCCCGATCTTaGTTGCTGTCTCTGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LNELHHAHCFLFQHDSLHHRPRS*LLSLVQ Trigger: TTGCACCAGAGACAGCAATCAAGATCGGGGCCTATG...ATGCAGGCTGTCATGCTGGAAAAGGAAACAGTGCGCATGATGCAGCTCATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR CAA 90 bp | CTAACTGGCCACAAGTGTGTGACACTGTGCTACAACCCAGCACAATaGCTATTCCAGGATTCACCGAGTTTCCTGCATAGTGTTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LTGHKCVTLCYNPAQ*LFQDSPSFLHSVLA Trigger: GGCTAGAACACTATGCAGGAAACTCGGTGAATCCTGGAATAGCAATTGTGCTGGGTTGTAGCACAGTGTCACACACTTGTGGCCAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR TCA 90 bp | TGCGTACGGTATGATGCTCAGCAGGTTGGGAACATAACCTTTGCTGAAGGCCTGTTTGAACCTGCATCGTaGCTTTCAAGCGTTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CVRYDAQQVGNITFAEGLFEPAS*LSSVPK Trigger: CTTTGGAACGCTTGAAAGTCACGATGCAGGTTCAAA...CAGGCCTTCAGCAAAGGTTATGTTCCCAACCTGCTGAGCATCATACCGTACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGAGCTGCATCATGCGCACTGTTTCCTTTTCCAGCATGACAGCCTGCATGGAAAACTGGCTAACTaGCCACAAGTGTGTGACACT | + |
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Preference number: 2 (lower is better) Translates to: LNELHHAHCFLFQHDSLHGKLAN*PQVCDT Trigger: AGTGTCACACACTTGTGGCCAGTTAGCCAGTTTTCC...ATGCAGGCTGTCATGCTGGAAAAGGAAACAGTGCGCATGATGCAGCTCATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGAAGGCCTGAATACCCTCTCTCTTCAGAAGTTTCCTGACACAATCAACAAGGGAAATTTCTGGAAGTaGCAGGTCGGCAAGTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AEGLNTLSLQKFPDTINKGNFWK*QVGKLA Trigger: AGCCAACTTGCCGACCTGTCACTTCCAGAAATTTCC...CTTGTTGATTGTGTCAGGAAACTTCTGAAGAGAGAGGGTATTCAGGCCTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCTGCATCATGCGCACTGTTTCCTTTTCCAGCATGACAGCCTGCATGCGAACGCTCCAAAAGCTCTaGAAATTTCTGGAAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: MSCIMRTVSFSSMTACMRTLQKL*KFLEVT Trigger: TGTCACTTCCAGAAATTTCCAGAGCTTTTGGAGCGT...TCGCATGCAGGCTGTCATGCTGGAAAAGGAAACAGTGCGCATGATGCAGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR GCA 90 bp | GATTCACCGAGTTTCCTGCATAGTGTTCTAGCCAGTGATTCTTCAGAAGCTCGAGGCCCCGATCTTGATTaGTGTCTCTGGTGCAATTTT | + |
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Preference number: 2 (lower is better) Translates to: DSPSFLHSVLASDSSEARGPDLD*CLWCNF Trigger: AAAATTGCACCAGAGACAGCAATCAAGATCGGGGCC...TCGAGCTTCTGAAGAATCACTGGCTAGAACACTATGCAGGAAACTCGGTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR TCA 90 bp | AATCAACAAGCCCAGAATACTCTCCAGTTTTACTTAAATTCAGCCTGGTCTTTACATCTAGCCCAGGTGTaGTCTGATACCTTGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: NQQAQNTLQFYLNSAWSLHLAQV*SDTLVM Trigger: CATCACCAAGGTATCAGATCACACCTGGGCTAGATG...TAAAGACCAGGCTGAATTTAAGTAAAACTGGAGAGTATTCTGGGCTTGTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAGATTAATCCAAAAAGCCTTTTCACTAGTTCGTGAGCCACACTGCCAATGCAAGATGTCTTTGGCCTaGGAGAGAGAAATGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: SRLIQKAFSLVREPHCQCKMSLA*EREMWI Trigger: AATCCACATTTCTCTCTCTCAGGCCAAAGACATCTT...GCATTGGCAGTGTGGCTCACGAACTAGTGAAAAGGCTTTTTGGATTAATCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR GCA 90 bp | AACATAACCTTTGCTGAAGGCCTGAATACCCTCTCTCTTCAGAAGTTTCCTGACACCCGTCAAAATCCATaGTTTTCAAGATGTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: NITFAEGLNTLSLQKFPDTRQNP*FSRCLW Trigger: CCAAAGACATCTTGAAAAGCATGGATTTTGACGGGT...GTCAGGAAACTTCTGAAGAGAGAGGGTATTCAGGCCTTCAGCAAAGGTTATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR TCA 90 bp | AATCAACAAGCCCAGAATACTCTCCAGTTTTACTTAAATTCAGCCTGGTCTTTAGGCAGCGACTATTTCTaGAGCATCTATTACGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NQQAQNTLQFYLNSAWSLGSDYF*SIYYAP Trigger: TGGAGCGTAATAGATGCTTCAGAAATAGTCGCTGCC...TAAAGACCAGGCTGAATTTAAGTAAAACTGGAGAGTATTCTGGGCTTGTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAGATTAATCCAAAAAGCCTTTTCACTAGTTCGTGAGCCACACTGCCAATGCATCTGCTTGAACATGTaGACCAAGCCCATTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: SRLIQKAFSLVREPHCQCICLNM*TKPILF Trigger: GAATAAAATGGGCTTGGTTCACATGTTCAAGCAGAT...GCATTGGCAGTGTGGCTCACGAACTAGTGAAAAGGCTTTTTGGATTAATCTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR CCA 90 bp | AACATAACCTTTGCTGAAGGCCTGAATACCCTCTCTCTTCAGAAGTTTCCTGACTTTTCAAGATGTCTTTaGCCTGAGAGAGAGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: NITFAEGLNTLSLQKFPDFSRCL*PEREKC Trigger: ACATTTCTCTCTCTCAGGCCAAAGACATCTTGAAAA...GTCAGGAAACTTCTGAAGAGAGAGGGTATTCAGGCCTTCAGCAAAGGTTATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAGATTAATCCAAAAAGCCTTTTCACTAGTTCGTGAGCCACACTGCCAATGCTACTTAAATTCAGCCTaGTCTTTATCACCTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: SRLIQKAFSLVREPHCQCYLNSA*SLSPPW Trigger: CCATGGAGGTGATAAAGACCAGGCTGAATTTAAGTA...GCATTGGCAGTGTGGCTCACGAACTAGTGAAAAGGCTTTTTGGATTAATCTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR TCA 72 bp | CTATTACGCTCCAAAAGCTCTGGAAATTTCTGGAAGTaGCAGGTCGGCAAGTTGGCTCTGAGCTCTGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LLRSKSSGNFWK*QVGKLALSSVQ Trigger: TTGCACAGAGCTCAGAGCCAACTTGCCGACCTGTCACTTCCAGAAATTTCCAGAGCTTTTGGAGCGTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR GCA 72 bp | GAAAACTGGCTAACTGGCCACAAGTGTGTGACACTGTaGTACAACCCAGCACAATTGCTATTCCAGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: ENWLTGHKCVTL*YNPAQLLFQDS Trigger: TGAATCCTGGAATAGCAATTGTGCTGGGTTGTAGCACAGTGTCACACACTTGTGGCCAGTTAGCCAGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR TCA 72 bp | GAAGAAGCAAGATCACCATCTAGCCCAGGTGTGATCTaGTACCTTGGTGATGATGGCAATGATGACAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: EEARSPSSPGVI*YLGDDGNDDSL Trigger: CAAACTGTCATCATTGCCATCATCACCAAGGTATCAGATCACACCTGGGCTAGATGGTGATCTTGCTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029478.5 |
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| 3UTR GCA 72 bp | ATCATGCGCACTGTTTCCTTTTCCAGCATGACAGCCTaGATGCGAGTTCTAACAAGAATCAGTGGAAAACTG | + |
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Preference number: 3 (lower is better) Translates to: IMRTVSFSSMTA*MRVLTRISGKL Trigger: CAGTTTTCCACTGATTCTTGTTAGAACTCGCATGCAGGCTGTCATGCTGGAAAAGGAAACAGTGCGCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR CCA 72 bp | ACTATTTCTGAAGCATCTATTACGCTCCAAAAGCTCTaGAAATTTCTGGAAGTGACAGGTCGGCAAGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: TISEASITLQKL*KFLEVTGRQVG Trigger: GCCAACTTGCCGACCTGTCACTTCCAGAAATTTCCAGAGCTTTTGGAGCGTAATAGATGCTTCAGAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR CCA 72 bp | TTTTACTTAAATTCAGCCTGGTCTTTATCACCTCCATaGGATAAACACAGGTTTGGGAAGTTGCACCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: FYLNSAWSLSPP*DKHRFGKLHQP Trigger: TGGCTGGTGCAACTTCCCAAACCTGTGTTTATCCCATGGAGGTGATAAAGACCAGGCTGAATTTAAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR TCA 72 bp | AAAAATCCCTTCTTCCCTTCTTTAGTGTATATTTCCTaGATGAGCTGCATCATGCGCACTGTTTCCTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: KNPFFPSLVYIS*MSCIMRTVSFS Trigger: GGAAAAGGAAACAGTGCGCATGATGCAGCTCATTCAGGAAATATACACTAAAGAAGGGAAGAAGGGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| 3UTR CAA 72 bp | CACAAGTGTGTGACACTGTGCTACAACCCAGCACAATaGCTATTCCAGGATTCACCGAGTTTCCTGCATAGT | + |
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Preference number: 4 (lower is better) Translates to: HKCVTLCYNPAQ*LFQDSPSFLHS Trigger: ACTATGCAGGAAACTCGGTGAATCCTGGAATAGCAATTGTGCTGGGTTGTAGCACAGTGTCACACACTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159926.3 |
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| CDS TCA 72 bp | TTGAAGGTACTGCACAAATTCTTCAAAATCCAGTCCTaGATCAGCATTGGAATCTGCATCCATAAAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: LKVLHKFFKIQS*ISIGICIHKNL Trigger: GAGATTTTTATGGATGCAGATTCCAATGCTGATTCAGGACTGGATTTTGAAGAATTTGTGCAGTACCTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029478.5 |
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| CDS CAA 72 bp | ACTATTTCTGAAGCATCTATTACGCCATCATCATTTTaGTCCAGACTCTTGAAGGCCAATTTCATTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TISEASITPSSF*SRLLKANFIFF Trigger: GAAGAAAATGAAATTGGCCTTCAAGAGTCTGGACAAAAATGATGATGGCGTAATAGATGCTTCAGAAATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029478.5 |
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