Pregenerated sensors for SLC25A53 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044348Ensembl transcript IDs: ENSMUST00000056674.6, ENSMUST00000113069.9, ENSMUST00000113070.9, ENSMUST00000129807.2, ENSMUST00000171738.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAGCTTCTCCCATGCAGTaGCAGTTTACAGATAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GGREGGPYRQWHWRWTLVASPMQ*QFTDSA Trigger: AGCACTATCTGTAAACTGTCACTGCATGGGAGAAGC...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAACACTGCATTTGGCTaGATTAAGCTGCCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: GGREGGPYRQWHWRWTLVNTAFG*IKLPML Trigger: AAGCATGGGCAGCTTAATCCAGCCAAATGCAGTGTT...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAAATCCTTGAAGGCATaGCCTTTAATCTGGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: GGREGGPYRQWHWRWTLVKSLKA*PLIWAT Trigger: TGTAGCCCAGATTAAAGGTCATGCCTTCAAGGATTT...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTACCAGGTTTACAGTACTaGGCAGAGTCCTCTTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGREGGPYRQWHWRWTLVPGLQY*AESSFK Trigger: TTTAAAAGAGGACTCTGCTCAGTACTGTAAACCTGG...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGCCTAGTGTAGTTCCTTaGGCTTGGAGTTCCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVPSVVP*AWSSTQ Trigger: CTGAGTGGAACTCCAAGCTCAAGGAACTACACTAGG...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGCCTAGTGTAGTTCCTTaGGCTTGGAGTTCCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWPSVVP*AWSSTQ Trigger: CTGAGTGGAACTCCAAGCTCAAGGAACTACACTAGG...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGGGTAGGCTTTGTCTGTaGCTAACAGGTGGAAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVGRLCL*LTGGKL Trigger: TAACTTTCCACCTGTTAGTCACAGACAAAGCCTACC...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGAAAGGCTTCAGGTTCTaGGGCTACTTATGCTGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWKGFRF*GYLCCV Trigger: TACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTT...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAAATATAGGCATCTCTaGAGTTGTCCTCAAAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: GGREGGPYRQWHWRWTLVKYRHL*SCPQSL Trigger: TAGGCTTTGAGGACAACTTCAGAGATGCCTATATTT...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGGGAATGTTTGGGGAGTaGAAAACACTGCATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVGMFGE*KTLHLA Trigger: AGCCAAATGCAGTGTTTTTCACTCCCCAAACATTCC...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGCCAGGTTTACAGTACTaGGCAGAGTCCTCTTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVPGLQY*AESSFK Trigger: TTTAAAAGAGGACTCTGCTCAGTACTGTAAACCTGG...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGGGAATGTTTGGGGAGTaGAAAACACTGCATTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWGMFGE*KTLHLA Trigger: AGCCAAATGCAGTGTTTTTCACTCCCCAAACATTCC...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGAAATATAGGCATCTCTaGAGTTGTCCTCAAAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVKYRHL*SCPQSL Trigger: TAGGCTTTGAGGACAACTTCAGAGATGCCTATATTT...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTATATGGGGTAATGATATaGATAAAGTTATATGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GGREGGPYRQWHWRWTLVYGVMI*IKLYGV Trigger: GACCCCATATAACTTTATGCATATCATTACCCCATA...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGAAATATAGGCATCTCTaGAGTTGTCCTCAAAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWKYRHL*SCPQSL Trigger: TAGGCTTTGAGGACAACTTCAGAGATGCCTATATTT...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGGACAATGGCTCTGAATaGCAGGCTATGATCATTATA | + |
|
Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWDNGSE*QAMIII Trigger: TATAATGATCATAGCCTGTCATTCAGAGCCATTGTC...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGAATTCATGGAATGTTTaGGGAGTGAAAAACACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVNSWNV*GVKNTA Trigger: TGCAGTGTTTTTCACTCCCCAAACATTCCATGAATT...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTAGGTAGGCTTTGTCTGTaGCTAACAGGTGGAAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: KSYLKASGSEATYAAYRLGRLCL*LTGGKL Trigger: TAACTTTCCACCTGTTAGTCACAGACAAAGCCTACC...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGAATTCATGGAATGTTTaGGGAGTGAAAAACACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWNSWNV*GVKNTA Trigger: TGCAGTGTTTTTCACTCCCCAAACATTCCATGAATT...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGTATGGGGTAATGATATaGATAAAGTTATATGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: REGGPYRQWHWRWTLVNWYGVMI*IKLYGV Trigger: GACCCCATATAACTTTATGCATATCATTACCCCATA...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAGGGCAGAGTATGGCCTaGAGTAAATTCATGGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: GGREGGPYRQWHWRWTLVGQSMA*SKFMEC Trigger: ACATTCCATGAATTTACTCAAGGCCATACTCTGCCC...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR CCA 72 bp | TACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTaGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: YRQWHWRWTLVN*RPFIGGGQCKW Trigger: CCACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGCTATCCAGGCACCAATaGTTTTCTCAGCCCCATATT | + |
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Preference number: 3 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVLSRHQ*FSQPHI Trigger: AATATGGGGCTGAGAAAACAATTGGTGCCTGGATAG...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGGGGCAGAGTATGGCCTaGAGTAAATTCATGGAATGT | + |
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Preference number: 3 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVGQSMA*SKFMEC Trigger: ACATTCCATGAATTTACTCAAGGCCATACTCTGCCC...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGCTATCCAGGCACCAATaGTTTTCTCAGCCCCATATT | + |
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Preference number: 3 (lower is better) Translates to: REGGPYRQWHWRWTLVNWLSRHQ*FSQPHI Trigger: AATATGGGGCTGAGAAAACAATTGGTGCCTGGATAG...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGTATATGGGGTCCATATaGACAATGGCTCTGAATGAC | + |
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Preference number: 3 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVYMGSI*TMALND Trigger: GTCATTCAGAGCCATTGTCAATATGGACCCCATATA...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGGGGCAGAGTATGGCCTaGAGTAAATTCATGGAATGT | + |
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Preference number: 3 (lower is better) Translates to: REGGPYRQWHWRWTLVNWGQSMA*SKFMEC Trigger: ACATTCCATGAATTTACTCAAGGCCATACTCTGCCC...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGAAATTCATGGAATGTTaGGGGAGTGAAAAACACTGC | + |
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Preference number: 3 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVKFMEC*GSEKHC Trigger: GCAGTGTTTTTCACTCCCCAAACATTCCATGAATTT...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGAAATTCATGGAATGTTaGGGGAGTGAAAAACACTGC | + |
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Preference number: 3 (lower is better) Translates to: REGGPYRQWHWRWTLVNWKFMEC*GSEKHC Trigger: GCAGTGTTTTTCACTCCCCAAACATTCCATGAATTT...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR CCA 72 bp | ACACTGCATTTGGCTGGATTAAGCTGCCCATGCTTATaGGGTAATGATATGCATAAAGTTATATGGGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: TLHLAGLSCPCL*GNDMHKVIWGP Trigger: TGGACCCCATATAACTTTATGCATATCATTACCCCATAAGCATGGGCAGCTTAATCCAGCCAAATGCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAGGGCAGGCCTTGCCTTaGCAAGCCATCCTGGATAGG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGPYRQWHWRWTLVGQALP*QAILDR Trigger: CCTATCCAGGATGGCTTGGCAAGGCAAGGCCTGCCC...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTACAATGGGGCAGGCCTTaGCTTGCCAAGCCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGPYRQWHWRWTLVQWGRP*LAKPSW Trigger: CCAGGATGGCTTGGCAAGGCAAGGCCTGCCCCATTG...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR TCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGCCGATAATAGCCCAGTaGCAGCCTGCCCCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVPIIAQ*QPAPEP Trigger: GGGCTCTGGGGCAGGCTGTCACTGGGCTATTATCGG...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGGCTCGGGTCTGGTGCTaGAGCTTCTTCCCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVARVWC*SFFPAV Trigger: CACTGCTGGGAAGAAGCTGCAGCACCAGACCCGAGC...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTACCAGCTTTTCGTTCCTaGAGCTTCTGCTCGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGPYRQWHWRWTLVPAFRS*SFCSGL Trigger: CAGACCCGAGCAGAAGCTCCAGGAACGAAAAGCTGG...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGAGCCCAGTGACAGCCTaGCCCAGAGCCCGTAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVSPVTA*PRARKN Trigger: ATTCTTACGGGCTCTGGGGCAGGCTGTCACTGGGCT...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGGGGCAGGCCTTGCCTTaGCAAGCCATCCTGGATAGG | + |
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Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWGQALP*QAILDR Trigger: CCTATCCAGGATGGCTTGGCAAGGCAAGGCCTGCCC...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGCAATGGGGCAGGCCTTaGCTTGCCAAGCCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWQWGRP*LAKPSW Trigger: CCAGGATGGCTTGGCAAGGCAAGGCCTGCCCCATTG...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGTCTGCTCGGGTCTGGTaGTGCAGCTTCTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVSARVW*CSFFPA Trigger: TGCTGGGAAGAAGCTGCAGCACCAGACCCGAGCAGA...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGAGCCCAGTGACAGCCTaGCCCAGAGCCCGTAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVSPVTA*PRARKN Trigger: ATTCTTACGGGCTCTGGGGCAGGCTGTCACTGGGCT...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGGACAGGGCCACAGCATaGATCTGCTGCCGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWDRATA*ICCRNT Trigger: TGTGTTCCGGCAGCAGATCCATGCTGTGGCCCTGTC...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR TCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTACCGATAATAGCCCAGTaGCAGCCTGCCCCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLPIIAQ*QPAPEP Trigger: GGGCTCTGGGGCAGGCTGTCACTGGGCTATTATCGG...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGCCAGCTTTTCGTTCCTaGAGCTTCTGCTCGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVPAFRS*SFCSGL Trigger: CAGACCCGAGCAGAAGCTCCAGGAACGAAAAGCTGG...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTAGCTCGGGTCTGGTGCTaGAGCTTCTTCCCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLARVWC*SFFPAV Trigger: CACTGCTGGGAAGAAGCTGCAGCACCAGACCCGAGC...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGTGTCCTGCTCCTCCATaGGGAACACAGATGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVCPAPP*GTQMDT Trigger: TGTGTCCATCTGTGTTCCGCATGGAGGAGCAGGACA...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGTGTCCTGCTCCTCCATaGGGAACACAGATGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWCPAPP*GTQMDT Trigger: TGTGTCCATCTGTGTTCCGCATGGAGGAGCAGGACA...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGACAGCAAGCAGTACATaGCTCCCACAGCAGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWTASST*LPQQVQ Trigger: CTGTACCTGCTGTGGGAGCCATGTACTGCTTGCTGT...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR TCA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTATGCTTTCGAGCATCTTaGAGCACATTCTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGREGGPYRQWHWRWTLVCFRAS*STFCTL Trigger: AAGAGTACAGAATGTGCTTCAAGATGCTCGAAAGCA...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTAAGCCCAGTGACAGCCTaGCCCAGAGCCCGTAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLSPVTA*PRARKN Trigger: ATTCTTACGGGCTCTGGGGCAGGCTGTCACTGGGCT...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTAGACAGGGCCACAGCATaGATCTGCTGCCGGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLDRATA*ICCRNT Trigger: TGTGTTCCGGCAGCAGATCCATGCTGTGGCCCTGTC...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCCAAAGAAATATACTAAACACGACCAACACAGAAAGATTTAGAAGACACGCTCGGGTCTGGTGCTaGAGCTTCTTCCCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQRNILNTTNTERFRRHARVWC*SFFPAV Trigger: CACTGCTGGGAAGAAGCTGCAGCACCAGACCCGAGC...GTGTCTTCTAAATCTTTCTGTGTTGGTCGTGTTTAGTATATTTCTTTGGCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCCAAAGAAATATACTAAACACGACCAACACAGAAAGATTTAGAAGACACGGGCAGGCCTTGCCTTaGCAAGCCATCCTGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQRNILNTTNTERFRRHGQALP*QAILDR Trigger: CCTATCCAGGATGGCTTGGCAAGGCAAGGCCTGCCC...GTGTCTTCTAAATCTTTCTGTGTTGGTCGTGTTTAGTATATTTCTTTGGCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCCAAAGAAATATACTAAACACGACCAACACAGAAAGATTTAGAAGACACCAATGGGGCAGGCCTTaGCTTGCCAAGCCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQRNILNTTNTERFRRHQWGRP*LAKPSW Trigger: CCAGGATGGCTTGGCAAGGCAAGGCCTGCCCCATTG...GTGTCTTCTAAATCTTTCTGTGTTGGTCGTGTTTAGTATATTTCTTTGGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGACAGATGGACACAGATaGAAGAAGCTGGTAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWTDGHR*KKLVTQ Trigger: CTGGGTTACCAGCTTCTTCCATCTGTGTCCATCTGT...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGCATGCGGAACACAGATaGACACAGATGGAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: REGGPYRQWHWRWTLVNWHAEHR*TQMEEA Trigger: AGCTTCTTCCATCTGTGTCCATCTGTGTTCCGCATG...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR CCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGCTGTCATCTCTTTCTTaGTGTGAGCCTTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVLSSLS*CEPFSA Trigger: TGCAGAGAAAGGCTCACACCAAGAAAGAGATGACAG...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| 3UTR CAA 72 bp | ATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATaGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQTVALEMDFSK*EAFYWGRAVQV Trigger: CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR TCA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGTGCTTTCGAGCATCTTaGAGCACATTCTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVCFRAS*STFCTL Trigger: AAGAGTACAGAATGTGCTTCAAGATGCTCGAAAGCA...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCCAAAGAAATATACTAAACACGACCAACACAGAAAGATTTAGAAGACACTCTGCTCGGGTCTGGTaGTGCAGCTTCTTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQRNILNTTNTERFRRHSARVW*CSFFPA Trigger: TGCTGGGAAGAAGCTGCAGCACCAGACCCGAGCAGA...GTGTCTTCTAAATCTTTCTGTGTTGGTCGTGTTTAGTATATTTCTTTGGCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGCTGTCATCTCTTTCTTaGTGTGAGCCTTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVLSSLS*CEPFSA Trigger: TGCAGAGAAAGGCTCACACCAAGAAAGAGATGACAG...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTAACAGATGGACACAGATaGAAGAAGCTGGTAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLTDGHR*KKLVTQ Trigger: CTGGGTTACCAGCTTCTTCCATCTGTGTCCATCTGT...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR CCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTACATGCGGAACACAGATaGACACAGATGGAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLHAEHR*TQMEEA Trigger: AGCTTCTTCCATCTGTGTCCATCTGTGTTCCGCATG...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR CCA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTACTGTCATCTCTTTCTTaGTGTGAGCCTTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSYLKASGSEATYAAYRLLSSLS*CEPFSA Trigger: TGCAGAGAAAGGCTCACACCAAGAAAGAGATGACAG...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCCAAAGAAATATACTAAACACGACCAACACAGAAAGATTTAGAAGACACTGCTTTCGAGCATCTTaGAGCACATTCTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSQRNILNTTNTERFRRHCFRAS*STFCTL Trigger: AAGAGTACAGAATGTGCTTCAAGATGCTCGAAAGCA...GTGTCTTCTAAATCTTTCTGTGTTGGTCGTGTTTAGTATATTTCTTTGGCTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS GCA 90 bp | TCTGCTCGGGTCTGGTGCTGCAGCTTCTTCCCAGCAGTGTTGTCCTaGTCCTCCATGCGGAACACAGATGGACACAGATGGAAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SARVWCCSFFPAVLS*SSMRNTDGHRWKKL Trigger: CAGCTTCTTCCATCTGTGTCCATCTGTGTTCCGCATGGAGGAGCAGGACAACACTGCTGGGAAGAAGCTGCAGCACCAGACCCGAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS-3UTR CAA 90 bp | GGGGGTAGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAAACAACAGAGTCCCTaGGAGGGTCTTGGAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGPYRQWHWRWTLVKQQSP*EGLGEK Trigger: CTTCTCTCCAAGACCCTCCAAGGGACTCTGTTGTTT...TACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCTACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CAA 90 bp | GAGATGGACTTTAGTAAATTGGAGGCCTTTTATTGGGGGAGGGCAGTGCAAGTGAAACAACAGAGTCCCTaGGAGGGTCTTGGAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EMDFSKLEAFYWGRAVQVKQQSP*EGLGEK Trigger: CTTCTCTCCAAGACCCTCCAAGGGACTCTGTTGTTT...CACTTGCACTGCCCTCCCCCAATAAAAGGCCTCCAATTTACTAAAGTCCATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTTACTTAAAGGCTTCAGGTTCTGAGGCTACTTATGCTGCGTATAGACTAAAACAACAGAGTCCCTaGGAGGGTCTTGGAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSYLKASGSEATYAAYRLKQQSP*EGLGEK Trigger: CTTCTCTCCAAGACCCTCCAAGGGACTCTGTTGTTT...TAGTCTATACGCAGCATAAGTAGCCTCAGAACCTGAAGCCTTTAAGTAAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGATACCCTGACAATGGAACCTATAACTTGGAAGTGAGAATGGCTGTGTTGCTTTCGAGCATCTaGAAGCACATTCTGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSRYPDNGTYNLEVRMAVLLSSI*KHILYS Trigger: AGAGTACAGAATGTGCTTCAAGATGCTCGAAAGCAA...CACAGCCATTCTCACTTCCAAGTTATAGGTTCCATTGTCAGGGTATCTGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS-3UTR CAA 90 bp | AGAGAAGGGGGTCCATACAGACAGTGGCATTGGAGATGGACTTTAGTAAATTGGTTGCTTTCGAGCATCTaGAAGCACATTCTGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: REGGPYRQWHWRWTLVNWLLSSI*KHILYS Trigger: AGAGTACAGAATGTGCTTCAAGATGCTCGAAAGCAA...CCAATTTACTAAAGTCCATCTCCAATGCCACTGTCTGTATGGACCCCCTTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000171738.2 |
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| CDS GCA 72 bp | CTTTTCGTTCCTGGAGCTTCTGCTCGGGTCTGGTGCTaGAGCTTCTTCCCAGCAGTGTTGTCCTGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFVPGASARVWC*SFFPAVLSCSS Trigger: GGAGGAGCAGGACAACACTGCTGGGAAGAAGCTGCAGCACCAGACCCGAGCAGAAGCTCCAGGAACGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056674.6 ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000129807.2 ENSMUST00000171738.2 |
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| CDS GCA 72 bp | CAGCTTTTCGTTCCTGGAGCTTCTGCTCGGGTCTGGTaGTGCAGCTTCTTCCCAGCAGTGTTGTCCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLFVPGASARVW*CSFFPAVLSCS Trigger: GGAGCAGGACAACACTGCTGGGAAGAAGCTGCAGCACCAGACCCGAGCAGAAGCTCCAGGAACGAAAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056674.6 ENSMUST00000113069.9 ENSMUST00000113070.9 ENSMUST00000129807.2 ENSMUST00000171738.2 |
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| CDS GCA 72 bp | GTCTGGTGCTGCAGCTTCTTCCCAGCAGTGTTGTCCTaGTCCTCCATGCGGAACACAGATGGACACAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: VWCCSFFPAVLS*SSMRNTDGHRW Trigger: CCATCTGTGTCCATCTGTGTTCCGCATGGAGGAGCAGGACAACACTGCTGGGAAGAAGCTGCAGCACCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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| CDS CCA 72 bp | TCCTGCTCCTCCATGCGGAACACAGATGGACACAGATaGAAGAAGCTGGTAACCCAGCAGGTACAGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCSSMRNTDGHR*KKLVTQQVQQA Trigger: TGCTTGCTGTACCTGCTGGGTTACCAGCTTCTTCCATCTGTGTCCATCTGTGTTCCGCATGGAGGAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113069.9 ENSMUST00000113070.9 |
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