Pregenerated sensors for SLC25A51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045973Ensembl transcript IDs: ENSMUST00000107796.8, ENSMUST00000116341.4, ENSMUST00000151516.2, ENSMUST00000153904.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCACGCGCTCTGGCTGCGGAGGCCACAGCCCAGCGGTGCAGGCTaGTTCCCGGGCAACAGCAGCCTAAAGCTCTGGAGTAATGACCAC | + |
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Preference number: 1 (lower is better) Translates to: KHALWLRRPQPSGAG*FPGNSSLKLWSNDH Trigger: GTGGTCATTACTCCAGAGCTTTAGGCTGCTGTTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGGCCTCCGCAGCCAGAGCGCGTGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | GAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTaGCCACATCCACCCAGCTCTCACCACCCTCAAACCAGGGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: EPKHECLPGNSLAQR*PHPPSSHHPQTRVH Trigger: GTGAACCCTGGTTTGAGGGTGGTGAGAGCTGGGTGGATGTGGTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | TCAAAGCTAACCCCAACCATTCATCATGGAGCTCAGGCATGGCACTaGGTGGCACCTCTGCTCCAGTCCTCCGTGCAGAGCTGGGGTCTA | + |
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Preference number: 1 (lower is better) Translates to: SKLTPTIHHGAQAWH*VAPLLQSSVQSWGL Trigger: TAGACCCCAGCTCTGCACGGAGGACTGGAGCAGAGGTGCCACTCAGTGCCATGCCTGAGCTCCATGATGAATGGTTGGGGTTAGCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR CCA 90 bp | TTTGACATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTaGCCCAGCGGTGACCACATCCACCCAGCTCTCACCACCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: FDIRNPSMNAFLATV*PSGDHIHPALTTLK Trigger: TTTGAGGGTGGTGAGAGCTGGGTGGATGTGGTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTATGTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | AAGCTCTGGAGTAATGACCACACCCGAACCCTGACACCTGCCCACTaGAACCTGGACTCTGTTCTTGTCAGTGCTCTGTCTGCAAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: KLWSNDHTRTLTPAH*NLDSVLVSALSASY Trigger: ATAACTTGCAGACAGAGCACTGACAAGAACAGAGTCCAGGTTTCAGTGGGCAGGTGTCAGGGTTCGGGTGTGGTCATTACTCCAGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR GCA 90 bp | AACCCTGACACCTGCCCACTGAAACCTGGACTCTGTTCTTGTCAGTaGTCTGTCTGCAAGTTATGGCTTGGTCTTGGACACCAAACTGTA | + |
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Preference number: 1 (lower is better) Translates to: NPDTCPLKPGLCSCQ*SVCKLWLGLGHQTV Trigger: TACAGTTTGGTGTCCAAGACCAAGCCATAACTTGCAGACAGAGCACTGACAAGAACAGAGTCCAGGTTTCAGTGGGCAGGTGTCAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | GAAGCAAGCAGAATAGCAGAGCCTGCAGTGACCAGCTTACCACGATaGAGCACACAACGGAATTTAACTAGGGCACCCTATCTTTTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: EASRIAEPAVTSLPR*STQRNLTRAPYLLA Trigger: TGCCAAAAGATAGGGTGCCCTAGTTAAATTCCGTTGTGTGCTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR GCA 90 bp | ACCTGCCCACTGAAACCTGGACTCTGTTCTTGTCAGTGCTCTGTCTaGAAGTTATGGCTTGGTCTTGGACACCAAACTGTACTTAAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: TCPLKPGLCSCQCSV*KLWLGLGHQTVLKP Trigger: TGGCTTAAGTACAGTTTGGTGTCCAAGACCAAGCCATAACTTGCAGACAGAGCACTGACAAGAACAGAGTCCAGGTTTCAGTGGGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR GCA 90 bp | CTGTCGACAGCAGTAGCACAAAGAAGCAAGCAGAATAGCAGAGCCTaGAGTGACCAGCTTACCACGATGAAGCACACAACGGAATTTAAC | + |
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Preference number: 1 (lower is better) Translates to: LSTAVAQRSKQNSRA*SDQLTTMKHTTEFN Trigger: GTTAAATTCCGTTGTGTGCTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTCTTTGTGCTACTGCTGTCGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | ACAAAGGAAGCAAAACCCCAATTTGCCACAATGCAAAGGCTGTGTTaGCCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAA | + |
|
Preference number: 1 (lower is better) Translates to: TKEAKPQFATMQRLC*PCYRPEGLQHWCVK Trigger: TTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACAGCCTTTGCATTGTGGCAAATTGGGGTTTTGCTTCCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | ACTGATGGTATTTCCATTACAGCATTTACCCAGAAAATAGCTATGTaGCTCCTTGGCCTGGTTCCTGCCAGTTGGATCCTACCTGACCAG | + |
|
Preference number: 1 (lower is better) Translates to: TDGISITAFTQKIAM*LLGLVPASWILPDQ Trigger: CTGGTCAGGTAGGATCCAACTGGCAGGAACCAGGCCAAGGAGTCACATAGCTATTTTCTGGGTAAATGCTGTAATGGAAATACCATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR TCA 90 bp | GTGGTCACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTaGTGGTATTTCCATTACAGCATTTACCCAGAAAATAGCTATGTG | + |
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Preference number: 1 (lower is better) Translates to: VVTDSFLKILSYFPD*WYFHYSIYPENSYV Trigger: CACATAGCTATTTTCTGGGTAAATGCTGTAATGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTGACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCCCAGCGGTGCAGGCTGGTTCCCGGGCAACAGCAGCCTAAAGCTCTGGCTGCCCACTGAAACCTaGACTCTGTTCTTGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PQPSGAGWFPGNSSLKLWLPTET*TLFLSV Trigger: CACTGACAAGAACAGAGTCCAGGTTTCAGTGGGCAG...CCAGAGCTTTAGGCTGCTGTTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | GGCACCTCTGCTCCAGTCCTCCGTGCAGAGCTGGGGTCTAATGATTATGGCCCTCCGAACCCTGACACCTaGCCACTGAAACCTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: GTSAPVLRAELGSNDYGPPNPDT*PLKPGL Trigger: GAGTCCAGGTTTCAGTGGGCAGGTGTCAGGGTTCGG...AGGGCCATAATCATTAGACCCCAGCTCTGCACGGAGGACTGGAGCAGAGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGCGGAGGCCACAGCCCAGCGGTGCAGGCTGGTTCCCGGGCAACAGCAGCGGAACAAAGCCAAATTaGATTTTCCTTAGGTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: WLRRPQPSGAGWFPGNSSGTKPN*IFLRSS Trigger: ACTAGACCTAAGGAAAATGCAATTTGGCTTTGTTCC...GCTGCTGTTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGGCCTCCGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCCCTGGGTTAGGTCCTCAGCTCTGGAAAGAAAGGAAGGAAGGAAGGAAGAGAATGAGCCTGAGATaGCCCGGGCTGGGGGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: QGPGLGPQLWKERKEGRKRMSLR*PGLGAK Trigger: CTTCGCCCCCAGCCCGGGGCATCTCAGGCTCATTCT...CTTCCTTCCTTCCTTCCTTTCTTTCCAGAGCTGAGGACCTAACCCAGGGCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACCTCTGCTCCAGTCCTCCGTGCAGAGCTGGGGTCTAATGATTATGGCCCTCTGACACCTGCCCACTaGAACCTGGACTCTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GTSAPVLRAELGSNDYGPLTPAH*NLDSVL Trigger: AAGAACAGAGTCCAGGTTTCAGTGGGCAGGTGTCAG...AGGGCCATAATCATTAGACCCCAGCTCTGCACGGAGGACTGGAGCAGAGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACCCGAACCCTGACACCTaGCCACTGAAACCTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDPNPDT*PLKPGL Trigger: GAGTCCAGGTTTCAGTGGGCAGGTGTCAGGGTTCGG...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR TCA 90 bp | CAAAACTGGGAAGGCTGGAGTGTAGTGGGACAGCATTTGCCTAGGATGTGCAAGACCACACCCGAACCCTaGCACCTGCCCACTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: QNWEGWSVVGQHLPRMCKTTPEP*HLPTET Trigger: GGTTTCAGTGGGCAGGTGTCAGGGTTCGGGTGTGGT...CTTGCACATCCTAGGCAAATGCTGTCCCACTACACTCCAGCCTTCCCAGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR TCA 90 bp | CGCTTTACAGCCGACACTTGCGCCACCTGCACGGAGTGTAAAGAAAACAAGGCCCAGTTGGATCCTACCTaGCCAGAAGTCAGGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RFTADTCATCTECKENKAQLDPT*PEVRAA Trigger: AGCAGCCCTGACTTCTGGTCAGGTAGGATCCAACTG...GGCCTTGTTTTCTTTACACTCCGTGCAGGTGGCGCAAGTGTCGGCTGTAAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACAACCAAGCTGACCGGTaGTGGTCACAGACAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDNQADR*WSQTAS Trigger: GGAAGCTGTCTGTGACCACCACCGGTCAGCTTGGTT...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACGCCACAGCCCAGCGGTaGAGGCTGGTTCCCGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RATSVIHCNLVFKSSKGDATAQR*RLVPGQ Trigger: TTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGGC...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCAGCTGCATCTGGGCAATaGTGCACGTGGACACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNAAASGQ*CTWTQG Trigger: CCCCTGTGTCCACGTGCAGCATTGCCCAGATGCAGC...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCAGCCACAGCCCAGCGGTaGAGGCTGGTTCCCGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HRQLPENSKLLPRLMVFPATAQR*RLVPGQ Trigger: TTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGGC...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCAAGGCATGGCACTGAGTaGCACCTCTGCTCCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNARHGTE*HLCSSP Trigger: AGGACTGGAGCAGAGGTGCCACTCAGTGCCATGCCT...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCCCTGGGTTAGGTCCTCAGCTCTGGAAAGAAAGGAAGGAAGGAAGGAAGCATTTGCCTAGGATGTaGAAGGCCCTGGGTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: QGPGLGPQLWKERKEGRKHLPRM*KALGSI Trigger: GATTGAACCCAGGGCCTTGCACATCCTAGGCAAATG...CTTCCTTCCTTCCTTCCTTTCTTTCCAGAGCTGAGGACCTAACCCAGGGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCATGTGACTCCTTGGCCTaGTTCCTGCCAGTTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNACDSLA*FLPVGS Trigger: GGATCCAACTGGCAGGAACCAGGCCAAGGAGTCACA...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAAACCCCAATTTGCCACAATGCAAAGGCTGTGTTGACCCTGCTACCGTCCTGACACCTGCCCACTaGAACCTGGACTCTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KQNPNLPQCKGCVDPATVLTPAH*NLDSVL Trigger: AAGAACAGAGTCCAGGTTTCAGTGGGCAGGTGTCAG...GACGGTAGCAGGGTCAACACAGCCTTTGCATTGTGGCAAATTGGGGTTTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACTGTCAGTGCTCTGTCTaGAAGTTATGGCTTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDCQCSV*KLWLGL Trigger: AAGACCAAGCCATAACTTGCAGACAGAGCACTGACA...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCACCGAGTCCTCACATTTaGCCCTTAATGTCCGCACTG | + |
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Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNAPSPHI*PLMSAL Trigger: CAGTGCGGACATTAAGGGGCAAATGTGAGGACTCGG...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCACATTTGCCTAGGATGTaGAAGGCCCTGGGTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNAHLPRM*KALGSI Trigger: GATTGAACCCAGGGCCTTGCACATCCTAGGCAAATG...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACAACTCCCCTCCCCTGTaGTGCATCTGGGCAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: RATSVIHCNLVFKSSKGDNSPPL*CIWAML Trigger: CAGCATTGCCCAGATGCAGCACAGGGGAGGGGAGTT...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACAGGCATGGCACTGAGTaGCACCTCTGCTCCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RATSVIHCNLVFKSSKGDRHGTE*HLCSSP Trigger: AGGACTGGAGCAGAGGTGCCACTCAGTGCCATGCCT...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCACAAAACTGGGAAGGCTaGAGTGTAGTGGGACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNAQNWEG*SVVGQH Trigger: ATGCTGTCCCACTACACTCCAGCCTTCCCAGTTTTG...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCCCTATTCTTAAGGACTaGGGATGCCAGGTCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VLRCISDKFLSAESSHLPPILKD*GCQVRQ Trigger: CTGCCGGACCTGGCATCCCCAGTCCTTAAGAATAGG...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACAAAAAGCAAAGAAACTaGCTTGCTTATGTCGACTCC | + |
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Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDKKQRN*LAYVDS Trigger: GGAGTCGACATAAGCAAGTCAGTTTCTTTGCTTTTT...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCAGTGTCCTCACTGGTTaGCTGTCGACAGCAGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: VLRCISDKFLSAESSHLPSVLTG*LSTAVA Trigger: TGCTACTGCTGTCGACAGCCAACCAGTGAGGACACT...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCCTGGTTCCTGCCAGTTaGATCCTACCTGACCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLRCISDKFLSAESSHLPLVPAS*ILPDQK Trigger: CTTCTGGTCAGGTAGGATCCAACTGGCAGGAACCAG...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCAGCTATGTGACTCCTTaGCCTGGTTCCTGCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: VLRCISDKFLSAESSHLPSYVTP*PGSCQL Trigger: CAACTGGCAGGAACCAGGCCAAGGAGTCACATAGCT...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACAACCAAGCTGACCGGTaGTGGTCACAGACAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RATSVIHCNLVFKSSKGDNQADR*WSQTAS Trigger: GGAAGCTGTCTGTGACCACCACCGGTCAGCTTGGTT...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAAGCAAGCAGAATAGCAGAGCCTGCAGTGACCAGCTTACCACGATGAAGCAGAGACAAAGTAAATaGGGTGAGAATGAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QRSKQNSRACSDQLTTMKQRQSK*GENEPE Trigger: CTCAGGCTCATTCTCACCTCATTTACTTTGTCTCTG...CTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACGGAACAAAGCCAAATTaGATTTTCCTTAGGTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDGTKPN*IFLRSS Trigger: ACTAGACCTAAGGAAAATGCAATTTGGCTTTGTTCC...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAAGCAAGCAGAATAGCAGAGCCTGCAGTGACCAGCTTACCACGATGAAGTGTCAGTGCTCTGTCTaGAAGTTATGGCTTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QRSKQNSRACSDQLTTMKCQCSV*KLWLGL Trigger: AAGACCAAGCCATAACTTGCAGACAGAGCACTGACA...CTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGAAGCAAGCAGAATAGCAGAGCCTGCAGTGACCAGCTTACCACGATGAAGCTCTGTTCTTGTCAGTaGTCTGTCTGCAAGTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: QRSKQNSRACSDQLTTMKLCSCQ*SVCKLW Trigger: CCATAACTTGCAGACAGAGCACTGACAAGAACAGAG...CTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACCAGAATAGCAGAGCCTaGAGTGACCAGCTTACCACG | + |
|
Preference number: 2 (lower is better) Translates to: RATSVIHCNLVFKSSKGDQNSRA*SDQLTT Trigger: CGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTG...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACCACTGGTGTGTTAAATaGAAAACTCGTAGGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDHWCVK*KTRRFL Trigger: TAGAAACCTACGAGTTTTGCATTTAACACACCAGTG...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR TCA 90 bp | AAACTTTATGGAAGTGTTTATTTGTTTAAAGTCCAGTACCAGAGAGCAGGACAGACCACACCCGAACCCTaGCACCTGCCCACTGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: KLYGSVYLFKVQYQRAGQTTPEP*HLPTET Trigger: GGTTTCAGTGGGCAGGTGTCAGGGTTCGGGTGTGGT...CTGTCCTGCTCTCTGGTACTGGACTTTAAACAAATAAACACTTCCATAAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACACAATTCTGCTTCATTaGACAGGGTCACAATATATA | + |
|
Preference number: 2 (lower is better) Translates to: IRNPSMNAFLATVWPSGDTILLH*TGSQYI Trigger: TATATATTGTGACCCTGTGCAATGAAGCAGAATTGT...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCACTGGTTCCTGCCAGTTaGATCCTACCTGACCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: HRQLPENSKLLPRLMVFPLVPAS*ILPDQK Trigger: CTTCTGGTCAGGTAGGATCCAACTGGCAGGAACCAG...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACCAAAACTGGGAAGGCTaGAGTGTAGTGGGACAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RATSVIHCNLVFKSSKGDQNWEG*SVVGQH Trigger: ATGCTGTCCCACTACACTCCAGCCTTCCCAGTTTTG...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCACCCAACTGTTACAGCTaGATGATGGTAGCTTTATGT | + |
|
Preference number: 2 (lower is better) Translates to: CVDPATVLRVYSTGVLNAPNCYS*MMVALC Trigger: ACATAAAGCTACCATCATCCAGCTGTAACAGTTGGG...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR TCA 90 bp | AAATTAAAGTATAATCCCTGGTTAACTCCCCTCCCCTGTGCTGCATCTGGGCAACTGCAGCTGAGGGTCTaGTTTCAGTTTATAGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: KLKYNPWLTPLPCAASGQLQLRV*FQFIGT Trigger: TGTACCTATAAACTGAAATCAGACCCTCAGCTGCAG...TTGCCCAGATGCAGCACAGGGGAGGGGAGTTAACCAGGGATTATACTTTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCACTGCCCACTGAAACCTaGACTCTGTTCTTGTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: HRQLPENSKLLPRLMVFPLPTET*TLFLSV Trigger: CACTGACAAGAACAGAGTCCAGGTTTCAGTGGGCAG...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCAGCACAAGGACATTCTaGAAGGGCTTAAAGTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VLRCISDKFLSAESSHLPSTRTF*KGLKSD Trigger: GTCTGACTTTAAGCCCTTCCAGAATGTCCTTGTGCT...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAAAACCCCAATTTGCCACAATGCAAAGGCTGTGTTGACCCTGCTACCGTCGTTAAAGAGCTGTTTTaGATTACCTTCCCCAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KQNPNLPQCKGCVDPATVVKELF*ITFPRN Trigger: GTTTCTGGGGAAGGTAATCCAAAACAGCTCTTTAAC...GACGGTAGCAGGGTCAACACAGCCTTTGCATTGTGGCAAATTGGGGTTTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTTGTTTAAAGTCCAGTACCAGAGAGCAGGACAGACATGACAGTTACTATAGTGTCCTCACTGGTTaGCTGTCGACAGCAGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FICLKSSTREQDRHDSYYSVLTG*LSTAVA Trigger: TGCTACTGCTGTCGACAGCCAACCAGTGAGGACACT...ATAGTAACTGTCATGTCTGTCCTGCTCTCTGGTACTGGACTTTAAACAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CCA 90 bp | GTATGTACAATTCTGCTTCATTGCACAGGGTCACAATATATAGCAAGTGATTATCCTATTCTTAAGGACTaGGGATGCCAGGTCCGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VCTILLHCTGSQYIASDYPILKD*GCQVRQ Trigger: CTGCCGGACCTGGCATCCCCAGTCCTTAAGAATAGG...ATAATCACTTGCTATATATTGTGACCCTGTGCAATGAAGCAGAATTGTACATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR TCA 90 bp | GTATGTACAATTCTGCTTCATTGCACAGGGTCACAATATATAGCAAGTGATTATCTCTCAAACTGCAGCTaGGGGTCTGATTTCAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VCTILLHCTGSQYIASDYLSNCS*GSDFSL Trigger: TAAACTGAAATCAGACCCTCAGCTGCAGTTTGAGAG...ATAATCACTTGCTATATATTGTGACCCTGTGCAATGAAGCAGAATTGTACATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CAA 90 bp | CACGAGGCCAGCCCTCTAAACCTTACAAGTTTATCTATATTGTCTTaGAGCTTAGGAATTTCAGGTACTCAAATAATACTATGTATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: HEASPLNLTSLSILS*SLGISGTQIILCMY Trigger: GTACATACATAGTATTATTTGAGTACCTGAAATTCCTAAGCTCAAAGACAATATAGATAAACTTGTAAGGTTTAGAGGGCTGGCCTCGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | GCACGCGCTCTGGCTGCGGAGGCCACAGCCCAGCGGTaGAGGCTGGTTCCCGGGCAACAGCAGCCTAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARALAAEATAQR*RLVPGQQQPKA Trigger: AGCTTTAGGCTGCTGTTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGGCCTCCGCAGCCAGAGCGCGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | CTCTGGCTGCGGAGGCCACAGCCCAGCGGTGCAGGCTaGTTCCCGGGCAACAGCAGCCTAAAGCTCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LWLRRPQPSGAG*FPGNSSLKLWS Trigger: ACTCCAGAGCTTTAGGCTGCTGTTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGGCCTCCGCAGCCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | GCAGGCTGGTTCCCGGGCAACAGCAGCCTAAAGCTCTaGAGTAATGACCACACCCGAACCCTGACACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGWFPGNSSLKL*SNDHTRTLTPA Trigger: GGCAGGTGTCAGGGTTCGGGTGTGGTCATTACTCCAGAGCTTTAGGCTGCTGTTGCCCGGGAACCAGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR TCA 72 bp | ACCCCAACCATTCATCATGGAGCTCAGGCATGGCACTaGGTGGCACCTCTGCTCCAGTCCTCCGTGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TPTIHHGAQAWH*VAPLLQSSVQS Trigger: GCTCTGCACGGAGGACTGGAGCAGAGGTGCCACTCAGTGCCATGCCTGAGCTCCATGATGAATGGTTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | AGAGACAAAGTAAATGAGGTGAGAATGAGCCTGAGATaGCCCGGGCTGGGGGCGAAGCACGCGCTCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RDKVNEVRMSLR*PGLGAKHALWL Trigger: CAGCCAGAGCGCGTGCTTCGCCCCCAGCCCGGGGCATCTCAGGCTCATTCTCACCTCATTTACTTTGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | CAACCATTCATCATGGAGCTCAGGCATGGCACTGAGTaGCACCTCTGCTCCAGTCCTCCGTGCAGAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPFIMELRHGTE*HLCSSPPCRAG Trigger: CCCAGCTCTGCACGGAGGACTGGAGCAGAGGTGCCACTCAGTGCCATGCCTGAGCTCCATGATGAATGGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | AGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTaGCCCAGCGGTGACCACATCCACCCAGCTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RNPSMNAFLATV*PSGDHIHPALT Trigger: GGTGAGAGCTGGGTGGATGTGGTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | GGAGGGAGGAAGGAACCTATTCTTAAGGACTGGGGATaGCAGGTCCGGCAGCTCACGCCTTTAATCCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: GGRKEPILKDWG*QVRQLTPLIPT Trigger: TGTTGGGATTAAAGGCGTGAGCTGCCGGACCTGGCATCCCCAGTCCTTAAGAATAGGTTCCTTCCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR TCA 72 bp | GCAAAACCCCAATTTGCCACAATGCAAAGGCTGTGTTaGCCCTGCTACCGTCCTGAGGGTTTACAGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: AKPQFATMQRLC*PCYRPEGLQHW Trigger: CCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACAGCCTTTGCATTGTGGCAAATTGGGGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | GCAGTAGCACAAAGAAGCAAGCAGAATAGCAGAGCCTaGAGTGACCAGCTTACCACGATGAAGCACACAACG | + |
|
Preference number: 3 (lower is better) Translates to: AVAQRSKQNSRA*SDQLTTMKHTT Trigger: CGTTGTGTGCTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTCTTTGTGCTACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | AGCACTTATTTCAAAGCTAACCCCAACCATTCATCATaGAGCTCAGGCATGGCACTGAGTGGCACCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: STYFKANPNHSS*SSGMALSGTSA Trigger: AGCAGAGGTGCCACTCAGTGCCATGCCTGAGCTCCATGATGAATGGTTGGGGTTAGCTTTGAAATAAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | CAGTTACTATTCACAAGGGACAGTGTCCTCACTGGTTaGCTGTCGACAGCAGTAGCACAAAGAAGCAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLLFTRDSVLTG*LSTAVAQRSKQ Trigger: CTGCTTGCTTCTTTGTGCTACTGCTGTCGACAGCCAACCAGTGAGGACACTGTCCCTTGTGAATAGTAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGGAACCCAAGCATGAATGCCTTCCTGGCAACAGTCTGGCCCAGCGGTGACAGGGCACCCTATCTTTaGGCAATGAATTCAGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IRNPSMNAFLATVWPSGDRAPYL*AMNSVK Trigger: TTTTACTGAATTCATTGCCAAAAGATAGGGTGCCCT...GTCACCGCTGGGCCAGACTGTTGCCAGGAAGGCATTCATGCTTGGGTTCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTTACAGCCGACACTTGCGCCACCTGCACGGAGTGTAAAGAAAACAAGGCCAGGGCACCCTATCTTTaGGCAATGAATTCAGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFTADTCATCTECKENKARAPYL*AMNSVK Trigger: TTTTACTGAATTCATTGCCAAAAGATAGGGTGCCCT...GGCCTTGTTTTCTTTACACTCCGTGCAGGTGGCGCAAGTGTCGGCTGTAAAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR TCA 72 bp | AGAATAGCAGAGCCTGCAGTGACCAGCTTACCACGATaGAGCACACAACGGAATTTAACTAGGGCACCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RIAEPAVTSLPR*STQRNLTRAPY Trigger: ATAGGGTGCCCTAGTTAAATTCCGTTGTGTGCTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | TCAAAGGAGCGCTTTACAGCCGACACTTGCGCCACCTaGACGGAGTGTAAAGAAAACAAGGCCAAGTATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SKERFTADTCAT*TECKENKAKYN Trigger: ATTATACTTGGCCTTGTTTTCTTTACACTCCGTGCAGGTGGCGCAAGTGTCGGCTGTAAAGCGCTCCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | CACCCCAATGCTTACCAGGCTCCCAACTGTTACAGCTaGATGATGGTAGCTTTATGTAACCAGCTTCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPNAYQAPNCYS*MMVALCNQLQC Trigger: ACACTGAAGCTGGTTACATAAAGCTACCATCATCCAGCTGTAACAGTTGGGAGCCTGGTAAGCATTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAAAACCCCAATTTGCCACAATGCAAAGGCTGTGTTGACCCTGCTACCGTCATCTCAGACAAATTCTaGTCTGCCGAGTCCTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: KQNPNLPQCKGCVDPATVISDKF*SAESSH Trigger: ATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGAT...GACGGTAGCAGGGTCAACACAGCCTTTGCATTGTGGCAAATTGGGGTTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | TACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATaGAAAACTCGTAGGTTTCTAGTGGCATCAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: YRPEGLQHWCVK*KTRRFLVASDR Trigger: CCTGTCTGATGCCACTAGAAACCTACGAGTTTTGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | GGACTCTGTTCTTGTCAGTGCTCTGTCTGCAAGTTATaGCTTGGTCTTGGACACCAAACTGTACTTAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLCSCQCSVCKL*LGLGHQTVLKP Trigger: TGGCTTAAGTACAGTTTGGTGTCCAAGACCAAGCCATAACTTGCAGACAGAGCACTGACAAGAACAGAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | ATGACAGTTACTATTCACAAGGGACAGTGTCCTCACTaGTTGGCTGTCGACAGCAGTAGCACAAAGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: MTVTIHKGQCPH*LAVDSSSTKKQ Trigger: TTGCTTCTTTGTGCTACTGCTGTCGACAGCCAACCAGTGAGGACACTGTCCCTTGTGAATAGTAACTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR-3UTR CAA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCAGCCTGGGCTACCTGTaGAGAATCTGTCTCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: VLRCISDKFLSAESSHLPSLGYL*RICLKI Trigger: TATTTTGAGACAGATTCTCAACAGGTAGCCCAGGCT...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR TCA 72 bp | ATTTCCATTACAGCATTTACCCAGAAAATAGCTATGTaGCTCCTTGGCCTGGTTCCTGCCAGTTGGATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ISITAFTQKIAM*LLGLVPASWIL Trigger: TAGGATCCAACTGGCAGGAACCAGGCCAAGGAGTCACATAGCTATTTTCTGGGTAAATGCTGTAATGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR TCA 72 bp | TGGAAGCGTTCATTAGCTGCTCAACTCTATCAAATGTaGACAGAAAGTTTAGATCGCGGCTATCTCAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: WKRSLAAQLYQM*TESLDRGYLNS Trigger: GCTGTTGAGATAGCCGCGATCTAAACTTTCTGTTCACATTTGATAGAGTTGAGCAGCTAATGAACGCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR CCA 72 bp | TATGTAACCAGCTTCAGTGTAGTTAAAGAGCTGTTTTaGATTACCTTCCCCAGAAACTTCTCTCAAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: YVTSFSVVKELF*ITFPRNFSQTA Trigger: TGCAGTTTGAGAGAAGTTTCTGGGGAAGGTAATCCAAAACAGCTCTTTAACTACACTGAAGCTGGTTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | AAATTTATCAGAGACAGAGCCACCTCTGTAATACACTaGAATCTAGTCTTTAAGAGCTCTAAGGGTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: KFIRDRATSVIH*NLVFKSSKGDK Trigger: TTTGTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCTGTCTCTGATAAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| 3UTR GCA 72 bp | TCAAAGCCAAACAGCAAAATGGAAGCGTTCATTAGCTaGTCAACTCTATCAAATGTGAACAGAAAGTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKPNSKMEAFIS*STLSNVNRKFR Trigger: TCTAAACTTTCTGTTCACATTTGATAGAGTTGAGCAGCTAATGAACGCTTCCATTTTGCTGTTTGGCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| CDS-3UTR TCA 90 bp | CCACAGCCCAGCGGTGCAGGCTGGTTCCCGGGCAACAGCAGCCTAAAGCTCTGGCCTGGTAAGTGTTTGTaGACTTATCGTGATGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQPSGAGWFPGNSSLKLWPGKCL*TYRDVC Trigger: ACAAACATCACGATAAGTTCACAAACACTTACCAGG...CCAGAGCTTTAGGCTGCTGTTGCCCGGGAACCAGCCTGCACCGCTGGGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAGCAAGCAGAATAGCAGAGCCTGCAGTGACCAGCTTACCACGATGAAGCCATCCTTCCTCAGCTaGAGGACTGCATCCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRSKQNSRACSDQLTTMKPSFLS*RTASRV Trigger: GACCCGGGATGCAGTCCTGCAGCTGAGGAAGGATGG...CTTCATCGTGGTAAGCTGGTCACTGCAGGCTCTGCTATTCTGCTTGCTTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
||
| CDS-3UTR CCA 90 bp | CGCTTTACAGCCGACACTTGCGCCACCTGCACGGAGTGTAAAGAAAACAAGGCCCGAAGAGGTCAACATTaGGGGCCTCTTCTCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFTADTCATCTECKENKARRGQH*GPLLMC Trigger: GCACATGAGAAGAGGCCCCCAATGTTGACCTCTTCG...GGCCTTGTTTTCTTTACACTCCGTGCAGGTGGCGCAAGTGTCGGCTGTAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR CCA 90 bp | CGCTTTACAGCCGACACTTGCGCCACCTGCACGGAGTGTAAAGAAAACAAGGCCTACTCTGCAATCCCATaGCATCTGAGCGCCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RFTADTCATCTECKENKAYSAIP*HLSALK Trigger: CTTCAGGGCGCTCAGATGCCATGGGATTGCAGAGTA...GGCCTTGTTTTCTTTACACTCCGTGCAGGTGGCGCAAGTGTCGGCTGTAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR CAA 72 bp | CAAAACTGGGAAGGCTGGAGTGTAGTGGGACAGCATTaGCCTAGGATGTGCAAGGCCCTGGGTTCAATCCCT | + |
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Preference number: 4 (lower is better) Translates to: QNWEGWSVVGQH*PRMCKALGSIP Trigger: AGGGATTGAACCCAGGGCCTTGCACATCCTAGGCAAATGCTGTCCCACTACACTCCAGCCTTCCCAGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR TCA 90 bp | AGAGCCACCTCTGTAATACACTGCAATCTAGTCTTTAAGAGCTCTAAGGGTGACCTGCATCCCGGGTCTTaGTGCCGTAAAGCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RATSVIHCNLVFKSSKGDLHPGS*CRKAAA Trigger: GGCAGCAGCTTTACGGCATCAAGACCCGGGATGCAG...GTCACCCTTAGAGCTCTTAAAGACTAGATTGCAGTGTATTACAGAGGTGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR TCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCACTGCATCCCGGGTCTTaGTGCCGTAAAGCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: HRQLPENSKLLPRLMVFPLHPGS*CRKAAA Trigger: GGCAGCAGCTTTACGGCATCAAGACCCGGGATGCAG...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR GCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCACCATCCTTCCTCAGCTaGAGGACTGCATCCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HRQLPENSKLLPRLMVFPPSFLS*RTASRV Trigger: GACCCGGGATGCAGTCCTGCAGCTGAGGAAGGATGG...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR GCA 90 bp | TGTGTTGACCCTGCTACCGTCCTGAGGGTTTACAGCACTGGTGTGTTAAATGCAGCCTCGGTAATACTCTaGAATCCCATGGCATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: CVDPATVLRVYSTGVLNAASVIL*NPMASE Trigger: CTCAGATGCCATGGGATTGCAGAGTATTACCGAGGC...TGCATTTAACACACCAGTGCTGTAAACCCTCAGGACGGTAGCAGGGTCAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR CAA 72 bp | ACAGTTACTATTCACAAGGGACAGTGTCCTCACTGGTaGGCTGTCGACAGCAGTAGCACAAAGAAGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TVTIHKGQCPHW*AVDSSSTKKQA Trigger: TGCTTGCTTCTTTGTGCTACTGCTGTCGACAGCCAACCAGTGAGGACACTGTCCCTTGTGAATAGTAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR GCA 90 bp | GTACTCAGATGTATCTCAGACAAATTCTTGTCTGCCGAGTCCTCACATTTGCCCGCCTCGGTAATACTCTaGAATCCCATGGCATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VLRCISDKFLSAESSHLPASVIL*NPMASE Trigger: CTCAGATGCCATGGGATTGCAGAGTATTACCGAGGC...GGGCAAATGTGAGGACTCGGCAGACAAGAATTTGTCTGAGATACATCTGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR CCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCACCGGCCTTTCCTCTCTaGGGAAGAGTTTCTTTAACC | + |
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Preference number: 4 (lower is better) Translates to: HRQLPENSKLLPRLMVFPPAFPL*GRVSLT Trigger: GGTTAAAGAAACTCTTCCCCAGAGAGGAAAGGCCGG...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107796.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTGTTTAAAGTCCAGTACCAGAGAGCAGGACAGACATGACAGTTACTATCGAAGAGGTCAACATTaGGGGCCTCTTCTCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: FICLKSSTREQDRHDSYYRRGQH*GPLLMC Trigger: GCACATGAGAAGAGGCCCCCAATGTTGACCTCTTCG...ATAGTAACTGTCATGTCTGTCCTGCTCTCTGGTACTGGACTTTAAACAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR CCA 90 bp | TTTATTTGTTTAAAGTCCAGTACCAGAGAGCAGGACAGACATGACAGTTACTATTACTCTGCAATCCCATaGCATCTGAGCGCCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FICLKSSTREQDRHDSYYYSAIP*HLSALK Trigger: CTTCAGGGCGCTCAGATGCCATGGGATTGCAGAGTA...ATAGTAACTGTCATGTCTGTCCTGCTCTCTGGTACTGGACTTTAAACAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR TCA 90 bp | CACAGACAGCTTCCTGAAAATTCTAAGCTACTTCCCAGACTGATGGTATTTCCACCTGGTAAGTGTTTGTaGACTTATCGTGATGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: HRQLPENSKLLPRLMVFPPGKCL*TYRDVC Trigger: ACAAACATCACGATAAGTTCACAAACACTTACCAGG...TGGAAATACCATCAGTCTGGGAAGTAGCTTAGAATTTTCAGGAAGCTGTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS-3UTR TCA 90 bp | GTATGTACAATTCTGCTTCATTGCACAGGGTCACAATATATAGCAAGTGATTATTTATTCCCCAGGAGATaGGAGAGCGGTGGTAATTCA | + |
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Preference number: 4 (lower is better) Translates to: VCTILLHCTGSQYIASDYLFPRR*ESGGNS Trigger: TGAATTACCACCGCTCTCTCATCTCCTGGGGAATAA...ATAATCACTTGCTATATATTGTGACCCTGTGCAATGAAGCAGAATTGTACATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| 3UTR CAA 72 bp | AGCACACAACGGAATTTAACTAGGGCACCCTATCTTTaGGCAATGAATTCAGTAAAAACAGCACAAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: STQRNLTRAPYL*AMNSVKTAQGH Trigger: ATGTCCTTGTGCTGTTTTTACTGAATTCATTGCCAAAAGATAGGGTGCCCTAGTTAAATTCCGTTGTGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107796.8 ENSMUST00000116341.4 |
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| CDS GCA 72 bp | GGGGCCTCTTCTCATGTGCTTCGGAGTCCATCATGGTaGTTCCGGCCTTTCCTCTCTGGGGAAGAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GASSHVLRSPSW*FRPFLSGEEFL Trigger: AAGAAACTCTTCCCCAGAGAGGAAAGGCCGGAAGCACCATGATGGACTCCGAAGCACATGAGAAGAGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107796.8 ENSMUST00000151516.2 ENSMUST00000153904.2 |
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| CDS GCA 72 bp | GTTCGAAGAGGTCAACATTGGGGGCCTCTTCTCATGTaGTTCGGAGTCCATCATGGTGCTTCCGGCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VRRGQHWGPLLM*FGVHHGASGLS Trigger: GGAAAGGCCGGAAGCACCATGATGGACTCCGAAGCACATGAGAAGAGGCCCCCAATGTTGACCTCTTCGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107796.8 ENSMUST00000151516.2 ENSMUST00000153904.2 |
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| CDS CCA 72 bp | TTGGGGGCCTCTTCTCATGTGCTTCGGAGTCCATCATaGTGCTTCCGGCCTTTCCTCTCTGGGGAAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LGASSHVLRSPS*CFRPFLSGEEF Trigger: AAACTCTTCCCCAGAGAGGAAAGGCCGGAAGCACCATGATGGACTCCGAAGCACATGAGAAGAGGCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107796.8 ENSMUST00000151516.2 ENSMUST00000153904.2 |
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