Pregenerated sensors for SLC25A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016319Ensembl transcript IDs: ENSMUST00000016463.4
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGACAAGCCCAGAGAATCTGTCCAGAATGTTCAAGATATGGTATATTATACAACGGCCAGCGACAGCAGTaGCAGACTGTGCAATCATCC | + |
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Preference number: 4 (lower is better) Translates to: RQAQRICPECSRYGILYNGQRQQ*QTVQSS Trigger: GGATGATTGCACAGTCTGTCACTGCTGTCGCTGGCC...GTTGTATAATATACCATATCTTGAACATTCTGGACAGATTCTCTGGGCTTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016463.4 |
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| CDS-3UTR CCA 90 bp | AGACAAGCCCAGAGAATCTGTCCAGAATGTTCAAGATATGGTATATTATACAACGGACTCCCTGTTCCTTaGGGATACGAACCACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAQRICPECSRYGILYNGLPVP*GYEPRS Trigger: ACTGCGTGGTTCGTATCCCCAAGGAACAGGGAGTCC...GTTGTATAATATACCATATCTTGAACATTCTGGACAGATTCTCTGGGCTTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016463.4 |
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| CDS-3UTR TCA 90 bp | ACAAGCCCAGAGAATCTGTCCAGAATGTTCAAGATATGGTATATTATACAACATTGGACCATGCGCCCTTaGAAAAAGCCTTGCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSPENLSRMFKIWYIIQHWTMRP*KKPCSL Trigger: AAGGGAGCAAGGCTTTTTTCAAGGGCGCATGGTCCA...ATGTTGTATAATATACCATATCTTGAACATTCTGGACAGATTCTCTGGGCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016463.4 |
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| CDS-3UTR CCA 90 bp | ATAAAACAGACAAGCCCAGAGAATCTGTCCAGAATGTTCAAGATATGGTATATTAGATGTGAGTATTCTTaGGATCTGGGAGCATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKQTSPENLSRMFKIWYIRCEYS*DLGAFP Trigger: AGGGAATGCTCCCAGATCCCAAGAATACTCACATCT...AATATACCATATCTTGAACATTCTGGACAGATTCTCTGGGCTTGTCTGTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016463.4 |
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