Pregenerated sensors for SLC25A48 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021509Ensembl transcript IDs: ENSMUST00000021971.6
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAAACAGTCTGCAATCATGGAGGGAGGGAGTCCAAGCTCAGGATaGTGGCTGTGGCCCACCTGGCACTGGGCAGAGATGGCTGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: EKQSAIMEGGSPSSG*WLWPTWHWAEMAGS Trigger: AGACCCAGCCATCTCTGCCCAGTGCCAGGTGGGCCACAGCCATCATCCTGAGCTTGGACTCCCTCCCTCCATGATTGCAGACTGTTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | GTCATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTaGCACGCAACGACACCATCACATGACACTGCTCAGGCTTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VMSTEHPPLQALAVT*HATTPSHDTAQAWE Trigger: CTCCCAAGCCTGAGCAGTGTCATGTGATGGTGTCGTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | GTGGCTGCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTaGGGAGAGAAACAGTCTGCAATCATGGAGGGAGGGAGTCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: VAAWSMVCCFLPSLD*GEKQSAIMEGGSPS Trigger: GCTTGGACTCCCTCCCTCCATGATTGCAGACTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | AGTAGCATGGAAGGACACAGAACTAGGGATGGACAGGAAGGAAGGTaGCATCTCCCCGAGACTCTAGGGAGTCCTCTATCCCAGGTATGT | + |
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Preference number: 1 (lower is better) Translates to: SSMEGHRTRDGQEGR*HLPETLGSPLSQVC Trigger: ACATACCTGGGATAGAGGACTCCCTAGAGTCTCGGGGAGATGGCACCTTCCTTCCTGTCCATCCCTAGTTCTGTGTCCTTCCATGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | CGGAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTaGTGCAGTCAGTCAGGAAGGCTGTGTGGGATTGCTTGTAAATGT | + |
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Preference number: 1 (lower is better) Translates to: RRWLSCHRDAVVITT*CSQSGRLCGIACKC Trigger: ACATTTACAAGCAATCCCACACAGCCTTCCTGACTGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | TGGGCAGAGATGGCTGGGTCTTCCTACTCTCCAGTAATTTGTTCTTaGTGGTTCTACAGGTGTTGTCAGCATCTGCCTCGGGATGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: WAEMAGSSYSPVICS*WFYRCCQHLPRDEV Trigger: GACCTCATCCCGAGGCAGATGCTGACAACACCTGTAGAACCAGCAAGAACAAATTACTGGAGAGTAGGAAGACCCAGCCATCTCTGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | AAGTTAAAGCTCAGGCTTGCTGGCAGGCCTGGTGTCCGTGGCTCCTaGTTAGAACAGGATGTTAAACACCTTGTTCAAGGCTGTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: KLKLRLAGRPGVRGS*LEQDVKHLVQGCAA Trigger: AGCAGCACAGCCTTGAACAAGGTGTTTAACATCCTGTTCTAACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGCCTGAGCTTTAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | AGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTaGAGTCAGTCAGGAAGGCTGTGTGGGATTGCTTGTAAATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: RWLSCHRDAVVITTC*SQSGRLCGIACKCS Trigger: TGAACATTTACAAGCAATCCCACACAGCCTTCCTGACTGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | GAGAGGAAGGTGACCAAGATCTCTCAGAAGCCAGGGAGAGAGCTCTaGATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: ERKVTKISQKPGREL*MSHRNNPRGLRCFY Trigger: ATAAAAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCTGGCTTCTGAGAGATCTTGGTCACCTTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | TTTTTCTCAGGTGCTAATCCAGAGCTGAAAGAGATGGTGGCTGCCTaGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: FFSGANPELKEMVAA*SMVCCFLPSLDWGE Trigger: CTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATCTCTTTCAGCTCTGGATTAGCACCTGAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | ACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTaGATAGAGAGGAAGGTGACCAAGATCTCTCAGAAGCCAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: TLVSLWDGNISTDLN*IERKVTKISQKPGR Trigger: TCTCCCTGGCTTCTGAGAGATCTTGGTCACCTTCCTCTCTATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR TCA 90 bp | CAAGGTCATCTGAGATACACCATCTCCTCCATTTTGGGGACTAGGTaGGGAGGGCGGCGTTGCTGTTCACATCTTCAAAGAGTTCACATT | + |
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Preference number: 1 (lower is better) Translates to: QGHLRYTISSILGTR*GGRRCCSHLQRVHI Trigger: AATGTGAACTCTTTGAAGATGTGAACAGCAACGCCGCCCTCCTCACCTAGTCCCCAAAATGGAGGAGATGGTGTATCTCAGATGACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | CATCTCCCCGAGACTCTAGGGAGTCCTCTATCCCAGGTATGTATTTaGAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCG | + |
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Preference number: 1 (lower is better) Translates to: HLPETLGSPLSQVCI*KQFLLTLCLGLWRP Trigger: CGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTGGGATAGAGGACTCCCTAGAGTCTCGGGGAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR GCA 90 bp | CCTCTATCCCAGGTATGTATTTGGAAACAATTTTTATTGACCCTATaGCTGGGACTTTGGAGACCGTCCCCATCCCACCATTTCTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: PLSQVCIWKQFLLTL*LGLWRPSPSHHFLG Trigger: CCCTAAGAAATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTGGGATAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | GTCACCTGCCACGCAACGACACCATCACATGACACTGCTCAGGCTTaGGAGAGAATCTTTGGATATTCCTATCCTATATGTTCTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: VTCHATTPSHDTAQA*ERIFGYSYPICSFL Trigger: TAGAAAAGAACATATAGGATAGGAATATCCAAAGATTCTCTCCCAAGCCTGAGCAGTGTCATGTGATGGTGTCGTTGCGTGGCAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CCA 90 bp | GTATGTATTTGGAAACAATTTTTATTGACCCTATGCCTGGGACTTTaGAGACCGTCCCCATCCCACCATTTCTTAGGGTCTCCAATGAGT | + |
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Preference number: 1 (lower is better) Translates to: VCIWKQFLLTLCLGL*RPSPSHHFLGSPMS Trigger: ACTCATTGGAGACCCTAAGAAATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR TCA 90 bp | GTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGACCTTATGGTaGTCACAGGAATTCTTGCTTTGCTCTTTCTGTAGTTTCTATATT | + |
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Preference number: 1 (lower is better) Translates to: VQSRLWVSGYNWTLW*SQEFLLCSFCSFYI Trigger: AATATAGAAACTACAGAAAGAGCAAAGCAAGAATTCCTGTGATCACCATAAGGTCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGTGGCTGCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGTCCAAGCTCAGGATaGTGGCTGTGGCCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: DGGCLVHGLLLPSIIRLGSPSSG*WLWPTW Trigger: CCAGGTGGGCCACAGCCATCATCCTGAGCTTGGACT...CCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | CATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTGCCACGCAACCTGGGCAGAGATGGCTaGGTCTTCCTACTCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: HVHRTPTPASSGCHLPRNLGRDG*VFLLSS Trigger: ACTGGAGAGTAGGAAGACCCAGCCATCTCTGCCCAG...GTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTTGGCCCACCTGGCACTaGGCAGAGATGGCTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLWPTWH*AEMAGS Trigger: AGACCCAGCCATCTCTGCCCAGTGCCAGGTGGGCCA...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTTGGCTGTGGCCCACCTaGCACTGGGCAGAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLWLWPT*HWAEMA Trigger: AGCCATCTCTGCCCAGTGCCAGGTGGGCCACAGCCA...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCAATTTTGGGGACTAGGTaGGGAGGGCGGCGTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: EMALMPQRCGSDHHVLQSILGTR*GGRRCC Trigger: ACAGCAACGCCGCCCTCCTCACCTAGTCCCCAAAAT...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | CATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTGCCACGCAACGGTTTCTCTCTGGGATaGCAACATCTCCACAGACCT | + |
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Preference number: 2 (lower is better) Translates to: HVHRTPTPASSGCHLPRNGFSLG*QHLHRP Trigger: AGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACC...GTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGTGGCTGCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGTCACTCTGTCCCACTTaGGACAGTCTCTTCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: DGGCLVHGLLLPSIIRLGSLCPT*DSLFQL Trigger: GAGCTGGAAGAGACTGTCTCAAGTGGGACAGAGTGA...CCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTAGGCAGGAAGACAGCTaGGCTGTGCAAAGTCGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLRQEDS*AVQSRL Trigger: GAGCCGACTTTGCACAGCGCAGCTGTCTTCCTGCCT...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGAGAAACAGCACGTGACGCGGACATaGTTCTGGGCCATTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AWSMVCCFLPSLDWGEKQHVTRT*FWAIRQ Trigger: CTGCCTAATGGCCCAGAACCATGTCCGCGTCACGTG...CTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCAGCTTGCTGGCAGGCCTaGTGTCCGTGGCTCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: ETIFIDPMPGTLETVPIPACWQA*CPWLLV Trigger: AACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGC...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTGTGCTAATCCAGAGCTaGAAGAGATGGTGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLVLIQS*KRWWLP Trigger: AGGCAGCCACCATCTCTTTCAGCTCTGGATTAGCAC...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGGCTGCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGTCTTCCAGCTCTCACTaGTGCTGCTTAGAGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: DGGCLVHGLLLPSIIRLGSSSSH*CCLEGL Trigger: TAAACCCTCTAAGCAGCAGCAGTGAGAGCTGGAAGA...CCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | CACACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTGGATAAAAGCTCAGGCTTGCTaGCAGGCCTGGTGTCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: HTLVSLWDGNISTDLNWIKAQAC*QAWCPW Trigger: CCACGGACACCAGGCCTGCCAGCAAGCCTGAGCTTT...TATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGACCGGGAAGAAAATGACACACACTGGTTTCTCTCTGGGATGGCAACATCTGGCACTGGGCAGAGATaGCTGGGTCTTCCTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: EDREENDTHWFLSGMATSGTGQR*LGLPTL Trigger: GAGAGTAGGAAGACCCAGCCATCTCTGCCCAGTGCC...AGATGTTGCCATCCCAGAGAGAAACCAGTGTGTGTCATTTTCTTCCCGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTCCTAAGGATGGTTTATaGGTGACTGGGACCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLPKDGL*VTGTLF Trigger: GAAGAGGGTCCCAGTCACTCATAAACCATCCTTAGG...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTGGGAGCGCAAGTCTATaGTGGGTTTTCATCATCCGT | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLGSASL*WVFIIR Trigger: ACGGATGATGAAAACCCAGCATAGACTTGCGCTCCC...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGAGAAACAGTGTTCCAAGGTCATCTaGGATACACCATCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AWSMVCCFLPSLDWGEKQCSKVI*DTPSPP Trigger: TGGAGGAGATGGTGTATCTCAGATGACCTTGGAACA...CTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTTGGTCCATGGTCTGCTaGTTCCTTCCATCATTAGAC | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLWSMVC*FLPSLD Trigger: GTCTAATGATGGAAGGAAGCAGCAGACCATGGACCA...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCAAGCTTCCAGCTGGCGTaGATACCGTGCCTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: ETIFIDPMPGTLETVPIPSFQLA*IPCLKC Trigger: GCATTTGAGGCACGGTATCCACGCCAGCTGGAAGCT...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CAA 90 bp | GTGAGGAGGGCGGCGTTGCTGTTCACATCTTCAAAGAGTTCACATTaGTGCTGCAGACGGTGGCCTGTTCCAAACCTTTGTAAGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: VRRAALLFTSSKSSH*CCRRWPVPNLCKLK Trigger: CTTTAACTTACAAAGGTTTGGAACAGGCCACCGTCTGCAGCACAAATGTGAACTCTTTGAAGATGTGAACAGCAACGCCGCCCTCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CAA 90 bp | CTAGGGAGTCCTCTATCCCAGGTATGTATTTGGAAACAATTTTTATaGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: LGSPLSQVCIWKQFL*TLCLGLWRPSPSHH Trigger: ATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTGGGATAGAGGACTCCCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CAA 90 bp | CCATCTCCCCGAGACTCTAGGGAGTCCTCTATCCCAGGTATGTATTaGGAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACC | + |
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Preference number: 2 (lower is better) Translates to: PSPRDSRESSIPGMY*ETIFIDPMPGTLET Trigger: GGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTGGGATAGAGGACTCCCTAGAGTCTCGGGGAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTAATTGGACCTTATGGTaGTCACAGGAATTCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLNWTLW*SQEFLL Trigger: AAGCAAGAATTCCTGTGATCACCATAAGGTCCAATT...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGAGAAACAGAAGCCATTTTGTAGCTaGAGATTTAAACCACGTGAC | + |
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Preference number: 2 (lower is better) Translates to: AWSMVCCFLPSLDWGEKQKPFCS*RFKPRD Trigger: GTCACGTGGTTTAAATCTTCAGCTACAAAATGGCTT...CTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | AGCGCATCTCCTTTCTTTGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCTCCAAGAGTGGCCTGGTGTaGCAACAAGGACAAGTACCC | + |
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Preference number: 2 (lower is better) Translates to: SASPFFGYEAPCKQKASSKSGLV*QQGQVP Trigger: GGGTACTTGTCCTTGTTGTCACACCAGGCCACTCTT...GGAGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTGATCACAGGAATTCTTaGTTTGCTCTTTCTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: RERALHVTQKQPKGLTVLDHRNS*FALSVV Trigger: AACTACAGAAAGAGCAAAGCAAGAATTCCTGTGATC...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | CACACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTGGATATCAAATGCCACGAGTTaGCTCTCTAGAAACTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HTLVSLWDGNISTDLNWISNATS*LSRNFL Trigger: GAGGAAGTTTCTAGAGAGCCAACTCGTGGCATTTGA...TATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR CCA 90 bp | AGCGCATCTCCTTTCTTTGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCTCCTTGTGCTGCAGACGGTaGCCTGTTCCAAACCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SASPFFGYEAPCKQKASSLCCRR*PVPNLC Trigger: ACAAAGGTTTGGAACAGGCCACCGTCTGCAGCACAA...GGAGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR CAA 90 bp | GGTATGTATTTGGAAACAATTTTTATTGACCCTATGCCTGGGACTTaGGAGACCGTCCCCATCCCACCATTTCTTAGGGTCTCCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: GMYLETIFIDPMPGT*ETVPIPPFLRVSNE Trigger: CTCATTGGAGACCCTAAGAAATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| 3UTR-3UTR TCA 90 bp | AGCGCATCTCCTTTCTTTGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCTCCGGAAACAATTTTTATTaGCCCTATGCCTGGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: SASPFFGYEAPCKQKASSGNNFY*PYAWDF Trigger: AAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCC...GGAGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | ACCTTGTTCAAGGCTGTGCTGCTAGCTGGGCGGTGGTaGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLFKAVLLAGRW*RTPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACCGCCCAGCTAGCAGCACAGCCTTGAACAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTGCCACGCAACGGGTTTCCCAACCCTTaGCAAGGGAGAGGACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVHRTPTPASSGCHLPRNGFPNP*QGRGHS Trigger: TGAATGTCCTCTCCCTTGCAAAGGGTTGGGAAACCC...GTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR TCA 72 bp | GGGGGAGACTATGCTGCTGGGTCACTCTGTCCCACTTaGGACAGTCTCTTCCAGCTCTCACTGCTGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGDYAAGSLCPT*DSLFQLSLLLL Trigger: AAGCAGCAGCAGTGAGAGCTGGAAGAGACTGTCTCAAGTGGGACAGAGTGACCCAGCAGCATAGTCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | AAGTCATGTCCACAGAACACCCACCCCTGCAAGCTCTaGCTGTCACCTGCCACGCAACGACACCATCACATG | + |
|
Preference number: 3 (lower is better) Translates to: KSCPQNTHPCKL*LSPATQRHHHM Trigger: CATGTGATGGTGTCGTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | GGTTCTGGGCCATTAGGCAGGAAGACAGCTGCGCTGTaGAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GSGPLGRKTAAL*KVGSGFQATIG Trigger: TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCTGCCTAATGGCCCAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | GAAGGACACAGAACTAGGGATGGACAGGAAGGAAGGTaGCATCTCCCCGAGACTCTAGGGAGTCCTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: EGHRTRDGQEGR*HLPETLGSPLS Trigger: GGATAGAGGACTCCCTAGAGTCTCGGGGAGATGGCACCTTCCTTCCTGTCCATCCCTAGTTCTGTGTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | CTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTaGTGCAGTCAGTCAGGAAGGCTGTGTGGGATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSCHRDAVVITT*CSQSGRLCGIA Trigger: AGCAATCCCACACAGCCTTCCTGACTGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | CTCAGGCTTGCTGGCAGGCCTGGTGTCCGTGGCTCCTaGTTAGAACAGGATGTTAAACACCTTGTTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LRLAGRPGVRGS*LEQDVKHLVQG Trigger: GCCTTGAACAAGGTGTTTAACATCCTGTTCTAACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | GTGACCAAGATCTCTCAGAAGCCAGGGAGAGAGCTCTaGATGTCACACAGAAACAACCCAAGGGGCTTACGG | + |
|
Preference number: 3 (lower is better) Translates to: VTKISQKPGREL*MSHRNNPRGLR Trigger: CCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCTGGCTTCTGAGAGATCTTGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | GAGAGGACATTCAGAAAGGAAAGCTTCCAGCTGGCGTaGATACCGTGCCTCAAATGCCACGAGTTGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ERTFRKESFQLA*IPCLKCHELAL Trigger: GAGAGCCAACTCGTGGCATTTGAGGCACGGTATCCACGCCAGCTGGAAGCTTTCCTTTCTGAATGTCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | CAAGGGAGAGGACATTCAGAAAGGAAAGCTTCCAGCTaGCGTGGATACCGTGCCTCAAATGCCACGAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGRGHSERKASS*RGYRASNATSW Trigger: CCAACTCGTGGCATTTGAGGCACGGTATCCACGCCAGCTGGAAGCTTTCCTTTCTGAATGTCCTCTCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR TCA 72 bp | AGCCCTCCCTCTCAATCTCGAGGACCGGGAAGAAAATaGCACACACTGGTTTCTCTCTGGGATGGCAACATC | + |
|
Preference number: 3 (lower is better) Translates to: SPPSQSRGPGRK*HTLVSLWDGNI Trigger: GATGTTGCCATCCCAGAGAGAAACCAGTGTGTGTCATTTTCTTCCCGGTCCTCGAGATTGAGAGGGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | CTGAAAGAGATGGTGGCTGCCTGGTCCATGGTCTGCTaGTTCCTTCCATCATTAGACTGGGGAGAGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LKEMVAAWSMVC*FLPSLDWGEKQ Trigger: CTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATCTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | GAGCTGAAAGAGATGGTGGCTGCCTGGTCCATGGTCTaGTGCTTCCTTCCATCATTAGACTGGGGAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ELKEMVAAWSMV*CFLPSLDWGEK Trigger: TTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATCTCTTTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | TGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTaGGGAGAGAAACAGTCTGCAATCATGGAGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WSMVCCFLPSLD*GEKQSAIMEGG Trigger: CCCTCCCTCCATGATTGCAGACTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | CTTCCTTCCATCATTAGACTGGGGAGAGAAACAGTCTaGAATCATGGAGGGAGGGAGTCCAAGCTCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LPSIIRLGRETV*NHGGRESKLRM Trigger: CATCCTGAGCTTGGACTCCCTCCCTCCATGATTGCAGACTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | CTCAATCTCGAGGACCGGGAAGAAAATGACACACACTaGTTTCTCTCTGGGATGGCAACATCTCCACAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LNLEDREENDTH*FLSGMATSPQT Trigger: GGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTGTCATTTTCTTCCCGGTCCTCGAGATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCAGTCACTCTGTCCCACTaGAGACAGTCTCTTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ETIFIDPMPGTLETVPIPVTLSH*RQSLPA Trigger: AGCTGGAAGAGACTGTCTCAAGTGGGACAGAGTGAC...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR TCA 72 bp | AACACAGGACTCATGAGGAAACCTAAGGATGGTTTATaGGTGACTGGGACCCTCTTCCTCAAGCCATCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: NTGLMRKPKDGL*VTGTLFLKPSP Trigger: TGGGGATGGCTTGAGGAAGAGGGTCCCAGTCACTCATAAACCATCCTTAGGTTTCCTCATGAGTCCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | ATGGCTGGGTCTTCCTACTCTCCAGTAATTTGTTCTTaGTGGTTCTACAGGTGTTGTCAGCATCTGCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: MAGSSYSPVICS*WFYRCCQHLPR Trigger: CCGAGGCAGATGCTGACAACACCTGTAGAACCAGCAAGAACAAATTACTGGAGAGTAGGAAGACCCAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | GCTGGGTCTTCCTACTCTCCAGTAATTTGTTCTTGCTaGTTCTACAGGTGTTGTCAGCATCTGCCTCGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: AGSSYSPVICSC*FYRCCQHLPRD Trigger: ATCCCGAGGCAGATGCTGACAACACCTGTAGAACCAGCAAGAACAAATTACTGGAGAGTAGGAAGACCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | TTTGTTCTTGCTGGTTCTACAGGTGTTGTCAGCATCTaGCTCGGGATGAGGTCTGTTCAGATTACAGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FVLAGSTGVVSI*LGMRSVQITVA Trigger: GGCTACTGTAATCTGAACAGACCTCATCCCGAGGCAGATGCTGACAACACCTGTAGAACCAGCAAGAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | TGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTaGTTTTATTTGGGAGCGCAAGTCTATGCTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CMSHRNNPRGLR*FYLGAQVYAGF Trigger: AAACCCAGCATAGACTTGCGCTCCCAAATAAAAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | CTTACGGTGCTTTTATTTGGGAGCGCAAGTCTATGCTaGGTTTTCATCATCCGTGGGCACAGAATGTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LTVLLFGSASLC*VFIIRGHRMSC Trigger: GCAAGACATTCTGTGCCCACGGATGATGAAAACCCAGCATAGACTTGCGCTCCCAAATAAAAGCACCGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | TCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTaGATAGAGAGGAAGGTGACCAAGATCTCTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLWDGNISTDLN*IERKVTKISQK Trigger: CTTCTGAGAGATCTTGGTCACCTTCCTCTCTATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | GCGTTGCTGTTCACATCTTCAAAGAGTTCACATTTGTaGTGCAGACGGTGGCCTGTTCCAAACCTTTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALLFTSSKSSHL*CRRWPVPNLCK Trigger: CTTACAAAGGTTTGGAACAGGCCACCGTCTGCAGCACAAATGTGAACTCTTTGAAGATGTGAACAGCAACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | TGGAAACAATTTTTATTGACCCTATGCCTGGGACTTTaGAGACCGTCCCCATCCCACCATTTCTTAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WKQFLLTLCLGL*RPSPSHHFLGS Trigger: AGACCCTAAGAAATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | GGGAAGAAAATGACACACACTGGTTTCTCTCTGGGATaGCAACATCTCCACAGACCTAAACTGGATAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GKKMTHTGFSLG*QHLHRPKLDRE Trigger: CTCTCTATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTGTCATTTTCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR TCA 72 bp | CGGCTCTGGGTTTCAGGCTACAATTGGACCTTATGGTaGTCACAGGAATTCTTGCTTTGCTCTTTCTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLWVSGYNWTLW*SQEFLLCSFCS Trigger: ACTACAGAAAGAGCAAAGCAAGAATTCCTGTGATCACCATAAGGTCCAATTGTAGCCTGAAACCCAGAGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR TCA 72 bp | GGATCTGAGGTCTTGCTTCTAAAGCCATTTTGTAGCTaGAGATTTAAACCACGTGACGCGGACATGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSEVLLLKPFCS*RFKPRDADMVL Trigger: CAGAACCATGTCCGCGTCACGTGGTTTAAATCTTCAGCTACAAAATGGCTTTAGAAGCAAGACCTCAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | CAGGTATGTATTTGGAAACAATTTTTATTGACCCTATaGCTGGGACTTTGGAGACCGTCCCCATCCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QVCIWKQFLLTL*LGLWRPSPSHH Trigger: ATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | CACGCAACGACACCATCACATGACACTGCTCAGGCTTaGGAGAGAATCTTTGGATATTCCTATCCTATATGT | + |
|
Preference number: 3 (lower is better) Translates to: HATTPSHDTAQA*ERIFGYSYPIC Trigger: ACATATAGGATAGGAATATCCAAAGATTCTCTCCCAAGCCTGAGCAGTGTCATGTGATGGTGTCGTTGCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR GCA 72 bp | TTGCTGTTCACATCTTCAAAGAGTTCACATTTGTGCTaGAGACGGTGGCCTGTTCCAAACCTTTGTAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLFTSSKSSHLC*RRWPVPNLCKL Trigger: TAACTTACAAAGGTTTGGAACAGGCCACCGTCTGCAGCACAAATGTGAACTCTTTGAAGATGTGAACAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CCA 72 bp | GAGACTCTAGGGAGTCCTCTATCCCAGGTATGTATTTaGAAACAATTTTTATTGACCCTATGCCTGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: ETLGSPLSQVCI*KQFLLTLCLGL Trigger: AAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTGGGATAGAGGACTCCCTAGAGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | CATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTGCCACGCAACCAGTGCACTGGTCCCTaGTATGCTGCCACCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVHRTPTPASSGCHLPRNQCTGP*YAATAL Trigger: CAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTG...GTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCACCCTGCCAGCCAAGCTaGATAGGGGCTGGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EMALMPQRCGSDHHVLQSPCQPS*IGAGPC Trigger: ACAGGGCCCAGCCCCTATGCAGCTTGGCTGGCAGGG...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCTTGCTGGCAGGCCTGGTGTCCGTGGCTCCTGGTTAGAACAGGATGTTACATGGCCGCACTCATaGGGAAGCCGCGCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLAGRPGVRGSWLEQDVTWPHS*GSRAQH Trigger: ATGCTGTGCGCGGCTTCCCCATGAGTGCGGCCATGT...AACATCCTGTTCTAACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR TCA 90 bp | CACCTTGTTCAAGGCTGTGCTGCTAGCTGGGCGGTGGTGGCGCACGCCTTTAATTGCAGGCCTCAGGTGTaGTCCACTCGCTCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HLVQGCAASWAVVAHAFNCRPQV*STRSGT Trigger: TGTTCCTGAGCGAGTGGATCACACCTGAGGCCTGCA...ATTAAAGGCGTGCGCCACCACCGCCCAGCTAGCAGCACAGCCTTGAACAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCACCCTGCAATGCCCCCTaGCAGCCAAGCTGCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMALMPQRCGSDHHVLQSPCNAP*QPSCIG Trigger: CCCTATGCAGCTTGGCTGGCAGGGGGCATTGCAGGG...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCTTGCTGGCAGGCCTGGTGTCCGTGGCTCCTGGTTAGAACAGGATGTTAAATTGCCCCTGCAATaGCCCCTGCCAGCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLAGRPGVRGSWLEQDVKLPLQ*PLPAKL Trigger: CAGCTTGGCTGGCAGGGGGCATTGCAGGGGCAATTT...AACATCCTGTTCTAACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCAAAGCTGCATAGGGGCTaGGCCCTGTGCAGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMALMPQRCGSDHHVLQSKLHRG*ALCRPQ Trigger: CTGAGGCCTGCACAGGGCCCAGCCCCTATGCAGCTT...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCTTGCTGGCAGGCCTGGTGTCCGTGGCTCCTGGTTAGAACAGGATGTTTATAGATGGCGATGCTaGCCAGGGGGAAGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLAGRPGVRGSWLEQDVYRWRC*PGGRTC Trigger: GCATGTCCTTCCCCCTGGCCAGCATCGCCATCTATA...AACATCCTGTTCTAACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCTTGCTGGCAGGCCTGGTGTCCGTGGCTCCTGGTTAGAACAGGATGTTGCACAATGGTTGCAATaGAGTGCACTGGTCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLAGRPGVRGSWLEQDVAQWLQ*SALVPG Trigger: ACCAGGGACCAGTGCACTGCATTGCAACCATTGTGC...AACATCCTGTTCTAACCAGGAGCCACGGACACCAGGCCTGCCAGCAAGCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | CATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTGCCACGCAACCATCTGCACAATGGTTaGAATGCAGTGCACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVHRTPTPASSGCHLPRNHLHNG*NAVHWS Trigger: GGACCAGTGCACTGCATTGCAACCATTGTGCAGATG...GTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGAGCTCTGCATGTCACACAGAAACAACCCAAGGGGCTTACGGTGCTTCCAGGAAATTGCCCCTaGAATGCCCCCTGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RERALHVTQKQPKGLTVLPGNCP*NAPCQP Trigger: TGGCTGGCAGGGGGCATTGCAGGGGCAATTTCCTGG...AAGCACCGTAAGCCCCTTGGGTTGTTTCTGTGTGACATGCAGAGCTCTCTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGCTGCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGTTGCTGAGGAACCGTTaGGTGTTGCTGAAGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DGGCLVHGLLLPSIIRLGLLRNR*VLLKTP Trigger: CGGGGTCTTCAGCAACACCCAACGGTTCCTCAGCAA...CCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGCAGCCACCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAGACAGCTGCGCTGTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGACATACCCGAGGAACATaGCCGCACTCATGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKTAALCKVGSGFQATIGHTRGT*PHSWGS Trigger: GCTTCCCCATGAGTGCGGCCATGTTCCTCGGGTATG...TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCAAGTTATAGATGGCGATaGTGGCCAGGGGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EMALMPQRCGSDHHVLQSSYRWR*WPGGRT Trigger: TGTCCTTCCCCCTGGCCAGCATCGCCATCTATAACT...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCAGGTAACTCTGGGAGATaGAGTCCACGACTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EMALMPQRCGSDHHVLQSGNSGR*SPRLLC Trigger: ACAGAGGAGTCGTGGACTGCATCTCCCAGAGTTACC...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | GCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGAGAAACAGTGCAATGCAGTGCACTaGTCCCTGGTATGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWSMVCCFLPSLDWGEKQCNAVH*SLVCCH Trigger: GTGGCAGCATACCAGGGACCAGTGCACTGCATTGCA...CTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACAGCTGCGCTGTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGAGTCAGGCCCTCCATCTaGACAATGGTTGCAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTAALCKVGSGFQATIGVRPSI*TMVAMQ Trigger: CTGCATTGCAACCATTGTGCAGATGGAGGGCCTGAC...TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCATCGCTTCTCACAGTGTaGTCTCCCCGGAGCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETIFIDPMPGTLETVPIPSLLTV*SPRSAF Trigger: GAAGGCGCTCCGGGGAGAGCACACTGTGAGAAGCGA...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | CACACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTGGATATGTCTCTCAGCAGCATaGCGCTGGCTCCCCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSLWDGNISTDLNWICLSAA*RWLPGT Trigger: TGTACCGGGGAGCCAGCGCCATGCTGCTGAGAGACA...TATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCATTTCACGACATCCATTaGAGTTGCTGTCCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMALMPQRCGSDHHVLQSFHDIH*SCCPPG Trigger: TCCTGGGGGACAGCAACTCCAATGGATGTCGTGAAA...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAGGACCGGGAAGAAAATGACACACACTGGTTTCTCTCTGGGATGGCAACATCTACCTCCGATCCAGCCTaGCACAAAGTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDREENDTHWFLSGMATSTSDPA*HKVFQL Trigger: CAGCTGGAAGACTTTGTGGCAGGCTGGATCGGAGGT...AGATGTTGCCATCCCAGAGAGAAACCAGTGTGTGTCATTTTCTTCCCGGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAGACAGCTGCGCTGTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGACCTCCATCTGCACAATaGTTGCAATGCAGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKTAALCKVGSGFQATIGPPSAQ*LQCSAL Trigger: CAGTGCACTGCATTGCAACCATTGTGCAGATGGAGG...TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR TCA 90 bp | AGCGCATCTCCTTTCTTTGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCTCCACCGTTGGGTGTTGCTaGAGACCCCGAACACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SASPFFGYEAPCKQKASSTVGCC*RPRTPP Trigger: CGGTGGTGTTCGGGGTCTTCAGCAACACCCAACGGT...GGAGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACAGCTGCGCTGTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGAGGCTGTGTTTGCATCTaGAGTCGGATCTTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKTAALCKVGSGFQATIGGCVCI*SRILMS Trigger: ACTCATCAAGATCCGACTGCAGATGCAAACACAGCC...TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | AGCGCATCTCCTTTCTTTGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCTCCTGGTCCCTGGTATGCTaGCACCGCCCTGGACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SASPFFGYEAPCKQKASSWSLVC*HRPGLQ Trigger: TTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCA...GGAGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CAA 72 bp | GCGGCGTTGCTGTTCACATCTTCAAAGAGTTCACATTaGTGCTGCAGACGGTGGCCTGTTCCAAACCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AALLFTSSKSSH*CCRRWPVPNLC Trigger: ACAAAGGTTTGGAACAGGCCACCGTCTGCAGCACAAATGTGAACTCTTTGAAGATGTGAACAGCAACGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CAA 72 bp | GATGGCTGGGTCTTCCTACTCTCCAGTAATTTGTTCTaGCTGGTTCTACAGGTGTTGTCAGCATCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DGWVFLLSSNLF*LVLQVLSASAS Trigger: CGAGGCAGATGCTGACAACACCTGTAGAACCAGCAAGAACAAATTACTGGAGAGTAGGAAGACCCAGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCAATGGTTGCAATGCAGTaGACTGGTCCCTGGTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETIFIDPMPGTLETVPIPMVAMQ*TGPWYA Trigger: AGCATACCAGGGACCAGTGCACTGCATTGCAACCAT...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CCA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCAGCTAGCTTCCCGAAATaGCTGTGTTTGCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETIFIDPMPGTLETVPIPASFPK*LCLHLQ Trigger: CTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGC...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR GCA 90 bp | CACACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTGGATACGAAATGGCTGTGTTTaGATCTGCAGTCGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSLWDGNISTDLNWIRNGCV*ICSRIL Trigger: CAAGATCCGACTGCAGATGCAAACACAGCCATTTCG...TATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CAA 72 bp | TTGGAAACAATTTTTATTGACCCTATGCCTGGGACTTaGGAGACCGTCCCCATCCCACCATTTCTTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LETIFIDPMPGT*ETVPIPPFLRV Trigger: GACCCTAAGAAATGGTGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CAA 72 bp | CCTCTATCCCAGGTATGTATTTGGAAACAATTTTTATaGACCCTATGCCTGGGACTTTGGAGACCGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSQVCIWKQFL*TLCLGLWRPSP Trigger: TGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTCCAAATACATACCTGGGATAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| 3UTR CAA 72 bp | AAACAAGGGGTCACGGGAAGAGCGCATCTCCTTTCTTaGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQGVTGRAHLLS*VMKLLVNRKQA Trigger: AGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCTCTTCCCGTGACCCCTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CCA 90 bp | CGCTGGCTCCCCGGTACAGCCCTGTCAGGCCCTCCATCTGCACAATaGTTGCAATGCAGTGCACTGGTCCCTGGTATGCTGCCACCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RWLPGTALSGPPSAQ*LQCSALVPGMLPPP Trigger: GGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACCGGGGAGCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | GGCTCCCCGGTACAGCCCTGTCAGGCCCTCCATCTGCACAATGGTTaGAATGCAGTGCACTGGTCCCTGGTATGCTGCCACCGCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSPVQPCQALHLHNG*NAVHWSLVCCHRPG Trigger: TCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACCGGGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | AGCATGGCGCTGGCTCCCCGGTACAGCCCTGTCAGGCCCTCCATCTaGACAATGGTTGCAATGCAGTGCACTGGTCCCTGGTATGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SMALAPRYSPVRPSI*TMVAMQCTGPWYAA Trigger: GGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACCGGGGAGCCAGCGCCATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | CCCGGTACAGCCCTGTCAGGCCCTCCATCTGCACAATGGTTGCAATaGAGTGCACTGGTCCCTGGTATGCTGCCACCGCCCTGGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGTALSGPPSAQWLQ*SALVPGMLPPPWTS Trigger: TGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CCA 90 bp | CCCTGTCAGGCCCTCCATCTGCACAATGGTTGCAATGCAGTGCACTaGTCCCTGGTATGCTGCCACCGCCCTGGACTTCAATCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCQALHLHNGCNAVH*SLVCCHRPGLQSMA Trigger: AGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | GCCCTGGACTTCAATCCATGGCTAGCTTCCCGAAATGGCTGTGTTTaGATCTGCAGTCGGATCTTGATGAGTTCCACGGGCCCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALDFNPWLASRNGCV*ICSRILMSSTGPPS Trigger: GCTGGGCGGGCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 90 bp | TACAGCCCTGTCAGGCCCTCCATCTGCACAATGGTTGCAATGCAGTaGACTGGTCCCTGGTATGCTGCCACCGCCCTGGACTTCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSPVRPSICTMVAMQ*TGPWYAATALDFNP Trigger: TGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CCA 90 bp | AGGCCCTCCATCTGCACAATGGTTGCAATGCAGTGCACTGGTCCCTaGTATGCTGCCACCGCCCTGGACTTCAATCCATGGCTAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPSICTMVAMQCTGP*YAATALDFNPWLAS Trigger: GGAAGCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS-3UTR CAA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCATCCCCACAGCGGTACTaGCTGAGGAACCGTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EMALMPQRCGSDHHVLQSSPQRY*LRNRWV Trigger: CACCCAACGGTTCCTCAGCAAGTACCGCTGTGGGGA...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | CATGTCCACAGAACACCCACCCCTGCAAGCTCTGGCTGTCACCTGCCACGCAACCCATCTGCACAATGGTaGCAATGCAGTGCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVHRTPTPASSGCHLPRNPSAQW*QCSALV Trigger: GACCAGTGCACTGCATTGCAACCATTGTGCAGATGG...GTTGCGTGGCAGGTGACAGCCAGAGCTTGCAGGGGTGGGTGTTCTGTGGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS TCA 90 bp | CCGAGTTATAGATGGCGATGCTGGCCAGGGGGAAGGACATGCCCTTaGAGAAGCCAAACACACGCTCCCTCTTGTACACCATGCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PSYRWRCWPGGRTCP*RSQTHAPSCTPCGC Trigger: GCATCCGCATGGTGTACAAGAGGGAGCGTGTGTTTGGCTTCTTCAAGGGCATGTCCTTCCCCCTGGCCAGCATCGCCATCTATAACTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCACTTGCTGAGGAACCGTaGGGTGTTGCTGAAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: EMALMPQRCGSDHHVLQSLAEEP*GVAEDP Trigger: GGGGTCTTCAGCAACACCCAACGGTTCCTCAGCAAG...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | GACTTCAATCCATGGCTAGCTTCCCGAAATGGCTGTGTTTGCATCTaGAGTCGGATCTTGATGAGTTCCACGGGCCCGCCCAGCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: DFNPWLASRNGCVCI*SRILMSSTGPPSPT Trigger: TGTTGGGCTGGGCGGGCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | CATCTGCACAATGGTTGCAATGCAGTGCACTGGTCCCTGGTATGCTaGCACCGCCCTGGACTTCAATCCATGGCTAGCTTCCCGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: HLHNGCNAVHWSLVC*HRPGLQSMASFPKW Trigger: CCATTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 90 bp | CTCCATCTGCACAATGGTTGCAATGCAGTGCACTGGTCCCTGGTATaGTGCCACCGCCCTGGACTTCAATCCATGGCTAGCTTCCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHLHNGCNAVHWSLV*CHRPGLQSMASFPK Trigger: TTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CCA 90 bp | TGCTGCCACCGCCCTGGACTTCAATCCATGGCTAGCTTCCCGAAATaGCTGTGTTTGCATCTGCAGTCGGATCTTGATGAGTTCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCHRPGLQSMASFPK*LCLHLQSDLDEFHG Trigger: CCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | AGGAAGACAGCTGCGCTGTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGAAGGAACCGTTGGGTGTaGCTGAAGACCCCGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RKTAALCKVGSGFQATIGRNRWV*LKTPNT Trigger: GGTGTTCGGGGTCTTCAGCAACACCCAACGGTTCCT...TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | GCCTGGTCCATGGTCTGCTGCTTCCTTCCATCATTAGACTGGGGAGAGAAACAGGGGAAGGACATGCCCTaGAAGAAGCCAAACACACGC | + |
|
Preference number: 5 (lower is better) Translates to: AWSMVCCFLPSLDWGEKQGKDMP*KKPNTR Trigger: GCGTGTGTTTGGCTTCTTCAAGGGCATGTCCTTCCC...CTGTTTCTCTCCCCAGTCTAATGATGGAAGGAAGCAGCAGACCATGGACCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | GAGATGGCTCTCATGCCACAGAGATGCGGTAGTGATCACCACGTGCTGCAGTCATTTTCACGACATCCATaGGAGTTGCTGTCCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EMALMPQRCGSDHHVLQSFSRHP*ELLSPR Trigger: CCTGGGGGACAGCAACTCCAATGGATGTCGTGAAAA...TGACTGCAGCACGTGGTGATCACTACCGCATCTCTGTGGCATGAGAGCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | CACACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTGGATAATCTGCAGTCGGATCTaGATGAGTTCCACGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HTLVSLWDGNISTDLNWIICSRI*MSSTGP Trigger: CGGGCCCGTGGAACTCATCAAGATCCGACTGCAGAT...TATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | AGGAAGACAGCTGCGCTGTGCAAAGTCGGCTCTGGGTTTCAGGCTACAATTGGAATAGACCCCATCTGCTaGGATTCGACTTTTCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: RKTAALCKVGSGFQATIGIDPIC*DSTFHD Trigger: GTCGTGAAAAGTCGAATCCAAGCAGATGGGGTCTAT...TCCAATTGTAGCCTGAAACCCAGAGCCGACTTTGCACAGCGCAGCTGTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | GAAACAATTTTTATTGACCCTATGCCTGGGACTTTGGAGACCGTCCCCATCCCACGACATCCATTGGAGTaGCTGTCCCCCAGGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: ETIFIDPMPGTLETVPIPRHPLE*LSPRKL Trigger: CAATTTCCTGGGGGACAGCAACTCCAATGGATGTCG...TGGGATGGGGACGGTCTCCAAAGTCCCAGGCATAGGGTCAATAAAAATTGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | CACACACTGGTTTCTCTCTGGGATGGCAACATCTCCACAGACCTAAACTGGATACCGAAATGGCTGTGTTaGCATCTGCAGTCGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTLVSLWDGNISTDLNWIPKWLC*HLQSDL Trigger: AAGATCCGACTGCAGATGCAAACACAGCCATTTCGG...TATCCAGTTTAGGTCTGTGGAGATGTTGCCATCCCAGAGAGAAACCAGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS-3UTR CAA 90 bp | AGCGCATCTCCTTTCTTTGGTTATGAAGCTCCTTGTAAACAGAAAGCAAGCTCCCACCTTAAAGCCTTCTaGCTGGTAACTCTGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SASPFFGYEAPCKQKASSHLKAF*LVTLGD Trigger: ATCTCCCAGAGTTACCAGCAAGAAGGCTTTAAGGTG...GGAGCTTGCTTTCTGTTTACAAGGAGCTTCATAACCAAAGAAAGGAGATGCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CAA 72 bp | CGGCCAGGGCCAGCCTCGAGTTCCCCACAGCGGTACTaGCTGAGGAACCGTTGGGTGTTGCTGAAGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RPGPASSSPQRY*LRNRWVLLKTP Trigger: CGGGGTCTTCAGCAACACCCAACGGTTCCTCAGCAAGTACCGCTGTGGGGAACTCGAGGCTGGCCCTGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CAA 90 bp | TGGCTCCCCGGTACAGCCCTGTCAGGCCCTCCATCTGCACAATGGTaGCAATGCAGTGCACTGGTCCCTGGTATGCTGCCACCGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLPGTALSGPPSAQW*QCSALVPGMLPPPW Trigger: CCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACCGGGGAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS CAA 90 bp | GACAGACTTCGGCCAGGGCCAGCCTCGAGTTCCCCACAGCGGTACTaGCTGAGGAACCGTTGGGTGTTGCTGAAGACCCCGAACACCACC | + |
|
Preference number: 6 (lower is better) Translates to: DRLRPGPASSSPQRY*LRNRWVLLKTPNTT Trigger: GGTGGTGTTCGGGGTCTTCAGCAACACCCAACGGTTCCTCAGCAAGTACCGCTGTGGGGAACTCGAGGCTGGCCCTGGCCGAAGTCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
||
| CDS GCA 72 bp | CTGGCTCCCCGGTACAGCCCTGTCAGGCCCTCCATCTaGACAATGGTTGCAATGCAGTGCACTGGTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPRYSPVRPSI*TMVAMQCTGPW Trigger: CCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACCGGGGAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 72 bp | GTCAGGCCCTCCATCTGCACAATGGTTGCAATGCAGTaGACTGGTCCCTGGTATGCTGCCACCGCCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VRPSICTMVAMQ*TGPWYAATALD Trigger: GTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | AGTAGAAGCAATATCCCGGGATGTCTCTCAGCAGCATaGCGCTGGCTCCCCGGTACAGCCCTGTCAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SRSNIPGCLSAA*RWLPGTALSGP Trigger: AGGGCCTGACAGGGCTGTACCGGGGAGCCAGCGCCATGCTGCTGAGAGACATCCCGGGATATTGCTTCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | GGAGCGCCTTCAGTGAGAGCTCATACCCGAGGAACATaGCCGCACTCATGGGGAAGCCGCGCACAGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: GAPSVRAHTRGT*PHSWGSRAQHS Trigger: TGAATGCTGTGCGCGGCTTCCCCATGAGTGCGGCCATGTTCCTCGGGTATGAGCTCTCACTGAAGGCGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS TCA 72 bp | GCTTCTCACAGTGTGCTCTCCCCGGAGCGCCTTCAGTaGGAGCTCATACCCGAGGAACATGGCCGCACTCAT | + |
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Preference number: 6 (lower is better) Translates to: ASHSVLSPERLQ*ELIPEEHGRTH Trigger: ATGAGTGCGGCCATGTTCCTCGGGTATGAGCTCTCACTGAAGGCGCTCCGGGGAGAGCACACTGTGAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 90 bp | TGGCTAGCTTCCCGAAATGGCTGTGTTTGCATCTGCAGTCGGATCTaGATGAGTTCCACGGGCCCGCCCAGCCCAACAGAGACCACACCA | + |
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Preference number: 6 (lower is better) Translates to: WLASRNGCVCICSRI*MSSTGPPSPTETTP Trigger: TGGTGTGGTCTCTGTTGGGCTGGGCGGGCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 90 bp | CGCCCTGGACTTCAATCCATGGCTAGCTTCCCGAAATGGCTGTGTTaGCATCTGCAGTCGGATCTTGATGAGTTCCACGGGCCCGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RPGLQSMASFPKWLC*HLQSDLDEFHGPAQ Trigger: CTGGGCGGGCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 72 bp | CCATGGCTAGCTTCCCGAAATGGCTGTGTTTGCATCTaGAGTCGGATCTTGATGAGTTCCACGGGCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PWLASRNGCVCI*SRILMSSTGPP Trigger: GGGCGGGCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 72 bp | GTACAGCCCTGTCAGGCCCTCCATCTGCACAATGGTTaGAATGCAGTGCACTGGTCCCTGGTATGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VQPCQALHLHNG*NAVHWSLVCCH Trigger: GTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | GCCCTCCATCTGCACAATGGTTGCAATGCAGTGCACTaGTCCCTGGTATGCTGCCACCGCCCTGGACTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ALHLHNGCNAVH*SLVCCHRPGLQ Trigger: TTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 72 bp | TCCCGAAATGGCTGTGTTTGCATCTGCAGTCGGATCTaGATGAGTTCCACGGGCCCGCCCAGCCCAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRNGCVCICSRI*MSSTGPPSPTE Trigger: CTCTGTTGGGCTGGGCGGGCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 72 bp | GGTACAGCCCTGTCAGGCCCTCCATCTGCACAATGGTaGCAATGCAGTGCACTGGTCCCTGGTATGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GTALSGPPSAQW*QCSALVPGMLP Trigger: TGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGATGGAGGGCCTGACAGGGCTGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 72 bp | CACAATGGTTGCAATGCAGTGCACTGGTCCCTGGTATaGTGCCACCGCCCTGGACTTCAATCCATGGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: HNGCNAVHWSLV*CHRPGLQSMAS Trigger: GCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | TCGAGTTCCCCACAGCGGTACTTGCTGAGGAACCGTTaGGTGTTGCTGAAGACCCCGAACACCACCGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSPQRYLLRNR*VLLKTPNTTEL Trigger: TAACTCGGTGGTGTTCGGGGTCTTCAGCAACACCCAACGGTTCCTCAGCAAGTACCGCTGTGGGGAACTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | CCCTGGTATGCTGCCACCGCCCTGGACTTCAATCCATaGCTAGCTTCCCGAAATGGCTGTGTTTGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PWYAATALDFNP*LASRNGCVCIC Trigger: GCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 72 bp | AATGGTTGCAATGCAGTGCACTGGTCCCTGGTATGCTaGCACCGCCCTGGACTTCAATCCATGGCTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: NGCNAVHWSLVC*HRPGLQSMASF Trigger: GAAGCTAGCCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | ATCTGCACAATGGTTGCAATGCAGTGCACTGGTCCCTaGTATGCTGCCACCGCCCTGGACTTCAATCCATGG | + |
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Preference number: 6 (lower is better) Translates to: ICTMVAMQCTGP*YAATALDFNPW Trigger: CCATGGATTGAAGTCCAGGGCGGTGGCAGCATACCAGGGACCAGTGCACTGCATTGCAACCATTGTGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 72 bp | GATGCAGTTGAATGTGTTCGCATAGCCGACACCAGCTaGCAGGCGAGTCTTGACTGTGTCCAGAGGGTACCC | + |
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Preference number: 6 (lower is better) Translates to: DAVECVRIADTS*QASLDCVQRVP Trigger: GGGTACCCTCTGGACACAGTCAAGACTCGCCTGCAAGCTGGTGTCGGCTATGCGAACACATTCAACTGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CCA 72 bp | CGCCCTGGACTTCAATCCATGGCTAGCTTCCCGAAATaGCTGTGTTTGCATCTGCAGTCGGATCTTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: RPGLQSMASFPK*LCLHLQSDLDE Trigger: CTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAGTCCAGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS GCA 72 bp | TTCAATCCATGGCTAGCTTCCCGAAATGGCTGTGTTTaGATCTGCAGTCGGATCTTGATGAGTTCCACGGGC | + |
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Preference number: 6 (lower is better) Translates to: FNPWLASRNGCV*ICSRILMSSTG Trigger: GCCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 72 bp | GACATGCCCTTGAAGAAGCCAAACACACGCTCCCTCTaGTACACCATGCGGATGCAGTTGAATGTGTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: DMPLKKPNTRSL*YTMRMQLNVFA Trigger: TGCGAACACATTCAACTGCATCCGCATGGTGTACAAGAGGGAGCGTGTGTTTGGCTTCTTCAAGGGCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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| CDS CAA 72 bp | CTTCAATCCATGGCTAGCTTCCCGAAATGGCTGTGTTaGCATCTGCAGTCGGATCTTGATGAGTTCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: LQSMASFPKWLC*HLQSDLDEFHG Trigger: CCCGTGGAACTCATCAAGATCCGACTGCAGATGCAAACACAGCCATTTCGGGAAGCTAGCCATGGATTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021971.6 |
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