Pregenerated sensors for SLC25A46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024259Ensembl transcript IDs: ENSMUST00000060396.7, ENSMUST00000233997.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTACTCCAGCACCCGTGCACATTGCTTGTTTACTAGTTAGGCACTaGAGAAGCCAGCGCCATCTTGTAATGGCGATTGTTCACGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: FTPAPVHIACLLVRH*RSQRHLVMAIVHGS Trigger: AGAGCCGTGAACAATCGCCATTACAAGATGGCGCTGGCTTCTGCAGTGCCTAACTAGTAAACAAGCAATGTGCACGGGTGCTGGAGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 90 bp | AAACACACTCGGACAACCGGGTCCTTCTACGGCAAAGCTTTTTATTaGTTACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: KHTRTTGSFYGKAFY*LLLRKTLNPENGAA Trigger: AGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAAAAAGCTTTGCCGTAGAAGGACCCGGTTGTCCGAGTGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 90 bp | ATATCCTTTATCCAATTTACCCTATTGTTACCGTTCAGCCTTATTTaGTTACTTCATCTCTTCATCTTCCCCTATTCTCACCCCCAACCA | + |
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Preference number: 1 (lower is better) Translates to: ISFIQFTLLLPFSLI*LLHLFIFPYSHPQP Trigger: TGGTTGGGGGTGAGAATAGGGGAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAATTGGATAAAGGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR TCA 90 bp | GAGAACGCAGAAATGCCAGCAGTAAGTAGTACTCTAACTTCAGTGTaGTGTGAACCCTTAAATAAGTTTTCTAAGTCACTTAACCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: ENAEMPAVSSTLTSV*CEPLNKFSKSLNLG Trigger: ACCTAGGTTAAGTGACTTAGAAAACTTATTTAAGGGTTCACATCACACTGAAGTTAGAGTACTACTTACTGCTGGCATTTCTGCGTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CAA 90 bp | TGCTCACTCATCACCCCACTGCTACACCCCGAGATGGGCAGTGACTaGGCACGAATTTACTCCAGCACCCGTGCACATTGCTTGTTTACT | + |
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Preference number: 2 (lower is better) Translates to: CSLITPLLHPEMGSD*ARIYSSTRAHCLFT Trigger: AGTAAACAAGCAATGTGCACGGGTGCTGGAGTAAATTCGTGCCAAGTCACTGCCCATCTCGGGGTGTAGCAGTGGGGTGATGAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGTAGGGACAGCTGCTACTGACACCTTACTTCATGCTTTTCCACGACCATATAAGTTCTTTGAGAAATaGAAGACAGGTGGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LVGTAATDTLLHAFPRPYKFFEK*KTGGAP Trigger: AGGAGCCCCACCTGTCTTTCATTTCTCAAAGAACTT...ATATGGTCGTGGAAAAGCATGAAGTAAGGTGTCAGTAGCAGCTGTCCCTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTTTTGCAGGAGCTGGAAATGTCTTTTCTGTTCTACAGCATCCACACCCATGCACAATCAGCGAGTaGGTGCTTTGTTGCATTCTA | + |
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Preference number: 2 (lower is better) Translates to: VVFAGAGNVFSVLQHPHPCTISE*VLCCIL Trigger: TAGAATGCAACAAAGCACTCACTCGCTGATTGTGCA...TGGGTGTGGATGCTGTAGAACAGAAAAGACATTTCCAGCTCCTGCAAAAACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR GCA 90 bp | TTATTGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTGCTTAAATAAACCCTTCAGCCACTaGTTACACAGTGCCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLTSQEDPEPGKWSCLNKPFSH*LHSAKA Trigger: AGCTTTGGCACTGTGTAAGCAGTGGCTGAAGGGTTT...ATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR TCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATCAAATTTCAAGTTTCTaGCACTGCAATGCTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: ASECFVAFYLTESHLRGYQISSF*HCNAGQ Trigger: CTGTCCAGCATTGCAGTGTCAGAAACTTGAAATTTG...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR TCA 90 bp | TACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCCCCTCTCCAGAACTTCATaGAACAGCATCACCAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: YPIVTVQPYLLTSSLHLPLSRTS*NSITSW Trigger: CCAACTGGTGATGCTGTTTCATGAAGTTCTGGAGAG...GGGAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTTTTGCAGGAGCTGGAAATGTCTTTTCTGTTCTACAGCATCCACACCCACAAGGCAGCGTCTTCTaGTTCTCAGATTATGAGATT | + |
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Preference number: 2 (lower is better) Translates to: VVFAGAGNVFSVLQHPHPQGSVF*FSDYEI Trigger: AATCTCATAATCTGAGAAGCAGAAGACGCTGCCTTG...TGGGTGTGGATGCTGTAGAACAGAAAAGACATTTCCAGCTCCTGCAAAAACTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR CCA 90 bp | TTATTGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTGCTTAAATCTGGTCTATGAAAACTaGCAGGGAAGAAGGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: LLLTSQEDPEPGKWSCLNLVYEN*QGRRKF Trigger: GAATTTCCTTCTTCCCTGCCAGTTTTCATAGACCAG...ATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CAA 90 bp | CATATCCTTTATCCAATTTACCCTATTGTTACCGTTCAGCCTTATTaGCTTACTTCATCTCTTCATCTTCCCCTATTCTCACCCCCAACC | + |
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Preference number: 2 (lower is better) Translates to: HILYPIYPIVTVQPY*LTSSLHLPLFSPPT Trigger: GGTTGGGGGTGAGAATAGGGGAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAATTGGATAAAGGATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCAGAGTTCACGATGTTTaGGGGAAACAGGCAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: QFTLLLPFSLICLLHLFIRVHDV*GKQAAK Trigger: TTTGGCTGCCTGTTTCCCCCAAACATCGTGAACTCT...GATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR-3UTR TCA 90 bp | ATACATCACTTTATTACAGAGTCTAATCCACCATGGGAACACATCAACTTCATTCGGTCATGGCTGCCATaGTTGTTAGGCTCTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: IHHFITESNPPWEHINFIRSWLP*LLGSLK Trigger: TTTTAAAGAGCCTAACAATCATGGCAGCCATGACCG...AATGAAGTTGATGTGTTCCCATGGTGGATTAGACTCTGTAATAAAGTGATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR TCA 90 bp | TTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCCAGGTATTCAAAACTGTaGGCTTATGGGGACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPYCYRSALFAYFISSSSRYSKL*AYGDIS Trigger: AGAAATGTCCCCATAAGCTCACAGTTTTGAATACCT...GGAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATAAAACTGTGAGCTTATaGGGACATTTCTATTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PIYPIVTVQPYLLTSSLHKTVSL*GHFYSS Trigger: GCTTGAATAGAAATGTCCCCATAAGCTCACAGTTTT...ATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAATTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR CAA 90 bp | AAAGAGTACCAAGAATGTCTCATTTTTATCTTCAGGGTAGCTTATTaGGAGAATAAAACTTTACATACACACACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: KEYQECLIFIFRVAY*ENKTLHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTATGTAAAGTTTTATTCTCCAAATAAGCTACCCTGAAGATAAAAATGAGACATTCTTGGTACTCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CAA 90 bp | ACACATCAACTTCATTTTATTAAGCTGATTAACAAGTTTCATTTGTaGAAATATAGTGTCTCCTCCTCCTCCTTCGTAACACATAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: THQLHFIKLINKFHL*KYSVSSSSFVTHKG Trigger: GCCCTTATGTGTTACGAAGGAGGAGGAGGAGACACTATATTTCAACAAATGAAACTTGTTAATCAGCTTAATAAAATGAAGTTGATGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR TCA 72 bp | ACTCATCACCCCACTGCTACACCCCGAGATGGGCAGTaGCTTGGCACGAATTTACTCCAGCACCCGTGCACA | + |
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Preference number: 3 (lower is better) Translates to: THHPTATPRDGQ*LGTNLLQHPCT Trigger: TGTGCACGGGTGCTGGAGTAAATTCGTGCCAAGTCACTGCCCATCTCGGGGTGTAGCAGTGGGGTGATGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 72 bp | ACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTaGTTAAATACCCCTCCGTGTGACGCGTCAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TSQEDPEPGKWS*LNTPPCDASAP Trigger: AGGAGCTGACGCGTCACACGGAGGGGTATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR TCA 72 bp | AGCATCCACACCCACATAGACAGCACACATCCTCCATaGCCTCGACCAACAACAGTACAGCTGTCAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SIHTHIDSTHPP*PRPTTVQLSRQ Trigger: CTGCCTTGACAGCTGTACTGTTGTTGGTCGAGGTCATGGAGGATGTGTGCTGTCTATGTGGGTGTGGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 72 bp | TTCAGCCGCCACACCTTCACTCTCAGGGAGTTTGACTaGCCACTCAGAGGACTTCGGGTTTTTAGATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: FSRHTFTLREFD*PLRGLRVFRCS Trigger: AGAACATCTAAAAACCCGAAGTCCTCTGAGTGGGCAGTCAAACTCCCTGAGAGTGAAGGTGTGGCGGCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR CCA 72 bp | TTGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAATaGAGCTGCTTAAATACCCCTCCGTGTGACGCGTCA | + |
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Preference number: 3 (lower is better) Translates to: LLTSQEDPEPGK*SCLNTPPCDAS Trigger: TGACGCGTCACACGGAGGGGTATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR CAA 90 bp | AAAGCCCACTCGGTGATATACTTCTTCCAGCAAGGCAGCAGCTCTCCAGAACTTAGGTTCATTCTGACCTaGGCTTCATCCCAGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: KAHSVIYFFQQGSSSPELRFILT*ASSQRS Trigger: GCTTCTCTGGGATGAAGCCAAGGTCAGAATGAACCT...AAGTTCTGGAGAGCTGCTGCCTTGCTGGAAGAAGTATATCACCGAGTGGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR GCA 72 bp | GCACCCGTGCACATTGCTTGTTTACTAGTTAGGCACTaGAGAAGCCAGCGCCATCTTGTAATGGCGATTGTT | + |
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Preference number: 3 (lower is better) Translates to: APVHIACLLVRH*RSQRHLVMAIV Trigger: AACAATCGCCATTACAAGATGGCGCTGGCTTCTGCAGTGCCTAACTAGTAAACAAGCAATGTGCACGGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 72 bp | TGCATGCATTCTAGGTTGGGCAACACCTGCAGGCACTaGACTTCAGTGTTTGTAAACTTGAGCATAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: CMHSRLGNTCRH*TSVFVNLSIAM Trigger: CATGGCTATGCTCAAGTTTACAAACACTGAAGTGCAGTGCCTGCAGGTGTTGCCCAACCTAGAATGCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 72 bp | GTGTTAGTTTGCATGCATTCTAGGTTGGGCAACACCTaGAGGCACTGCACTTCAGTGTTTGTAAACTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: VLVCMHSRLGNT*RHCTSVFVNLS Trigger: GCTCAAGTTTACAAACACTGAAGTGCAGTGCCTGCAGGTGTTGCCCAACCTAGAATGCATGCAAACTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR TCA 72 bp | ACTCCAAAGACACAGACTGGTAGGGACAGCTGCTACTaGCACCTTACTTCATGCTTTTCCACGACCATATTA | + |
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Preference number: 3 (lower is better) Translates to: TPKTQTGRDSCY*HLTSCFSTTIL Trigger: TAATATGGTCGTGGAAAAGCATGAAGTAAGGTGTCAGTAGCAGCTGTCCCTACCAGTCTGTGTCTTTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR GCA 72 bp | CAACAAAACTGGATGTCCATAATTCTTATTGGACATTaGGATCTTCAGCCGCCACACCTTCACTCTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: QQNWMSIILIGH*DLQPPHLHSQG Trigger: TCCCTGAGAGTGAAGGTGTGGCGGCTGAAGATCGCAATGTCCAATAAGAATTATGGACATCCAGTTTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR CCA 72 bp | AAGGCACCAACAAAACTGGATGTCCATAATTCTTATTaGACATTGCGATCTTCAGCCGCCACACCTTCACTC | + |
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Preference number: 3 (lower is better) Translates to: KAPTKLDVHNSY*TLRSSAATPSL Trigger: GAGTGAAGGTGTGGCGGCTGAAGATCGCAATGTCCAATAAGAATTATGGACATCCAGTTTTGTTGGTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGTAGGGACAGCTGCTACTGACACCTTACTTCATGCTTTTCCACGACCATATTCTCAGATAAGTTCTTaGAGAAATGAAAGACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LVGTAATDTLLHAFPRPYSQISS*RNERQV Trigger: CACCTGTCTTTCATTTCTCAAAGAACTTATCTGAGA...ATATGGTCGTGGAAAAGCATGAAGTAAGGTGTCAGTAGCAGCTGTCCCTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR TCA 72 bp | TTCATGCTTTTCCACGACCATATTAAGCTTCCACTCTaGTCAGTCACAGTCCAAACACCCTCTGCAACATTT | + |
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Preference number: 3 (lower is better) Translates to: FMLFHDHIKLPL*SVTVQTPSATF Trigger: AAATGTTGCAGAGGGTGTTTGGACTGTGACTGATCAGAGTGGAAGCTTAATATGGTCGTGGAAAAGCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR CAA 90 bp | AACCCTTCAGCCACTGCTTACACAGTGCCAAAGCTAATCACCAGTTCTTTTCAAGGTGACATACTCTATTaGCTTAAAGGTAAAATCCCA | + |
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Preference number: 3 (lower is better) Translates to: NPSATAYTVPKLITSSFQGDILY*LKGKIP Trigger: TGGGATTTTACCTTTAAGCAAATAGAGTATGTCACC...TTGAAAAGAACTGGTGATTAGCTTTGGCACTGTGTAAGCAGTGGCTGAAGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR-3UTR CAA 90 bp | TTATTGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTGCTTAAATTTCAGCAGCAGCATTTaGACTTCAGATGCAATAAAT | + |
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Preference number: 3 (lower is better) Translates to: LLLTSQEDPEPGKWSCLNFSSSI*TSDAIN Trigger: ATTTATTGCATCTGAAGTCAAAATGCTGCTGCTGAA...ATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CCA 72 bp | TTCTTGAGAGCCAGCATACATCAAATTCTCCGTACTTaGTGTATTTACCAAATAACAGGAAGGCACCAACAA | + |
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Preference number: 3 (lower is better) Translates to: FLRASIHQILRT*CIYQITGRHQQ Trigger: TTGTTGGTGCCTTCCTGTTATTTGGTAAATACACCAAGTACGGAGAATTTGATGTATGCTGGCTCTCAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR-3UTR CAA 90 bp | TTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCAGAGCAAACAAGAAGTaGCAGAAGGCTAGAAACTCT | + |
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Preference number: 3 (lower is better) Translates to: FTLLLPFSLICLLHLFIFRANKK*QKARNS Trigger: AGAGTTTCTAGCCTTCTGCAACTTCTTGTTTGCTCT...GAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| 3UTR GCA 72 bp | AATCACCAGTTCTTTTCAACGGTGACATACTCTATTTaGTTAAAGGTAAAATCCCAGCACTATCCACTGCTT | + |
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Preference number: 3 (lower is better) Translates to: NHQFFSTVTYSI*LKVKSQHYPLL Trigger: AAGCAGTGGATAGTGCTGGGATTTTACCTTTAAGCAAATAGAGTATGTCACCGTTGAAAAGAACTGGTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR TCA 72 bp | GAAATGCCAGCAGTAAGTAGTACTCTAACTTCAGTGTaGTGTGAACCCTTAAATAAGTTTTCTAAGTCACTT | + |
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Preference number: 3 (lower is better) Translates to: EMPAVSSTLTSV*CEPLNKFSKSL Trigger: AAGTGACTTAGAAAACTTATTTAAGGGTTCACATCACACTGAAGTTAGAGTACTACTTACTGCTGGCATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CCA 72 bp | TGTATTTACCAAATAACAGGAAGGCACCAACAAAACTaGATGTCCATAATTCTTATTGGACATTGCGATCTT | + |
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Preference number: 3 (lower is better) Translates to: CIYQITGRHQQN*MSIILIGHCDL Trigger: AAGATCGCAATGTCCAATAAGAATTATGGACATCCAGTTTTGTTGGTGCCTTCCTGTTATTTGGTAAATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| CDS-3UTR GCA 90 bp | CTGGTAGGGACAGCTGCTACTGACACCTTACTTCATGCTTTTCCACGACCATATAGTGCAGGTTGCGGCTaGCCGGGATGTCCGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LVGTAATDTLLHAFPRPYSAGCG*PGCPGA Trigger: CGCCCCCGGACATCCCGGGCAGCCGCAACCTGCACT...ATATGGTCGTGGAAAAGCATGAAGTAAGGTGTCAGTAGCAGCTGTCCCTACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CAA 72 bp | ATCACCCCACTGCTACACCCCGAGATGGGCAGTGACTaGGCACGAATTTACTCCAGCACCCGTGCACATTGC | + |
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Preference number: 4 (lower is better) Translates to: ITPLLHPEMGSD*ARIYSSTRAHC Trigger: GCAATGTGCACGGGTGCTGGAGTAAATTCGTGCCAAGTCACTGCCCATCTCGGGGTGTAGCAGTGGGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| CDS-3UTR CCA 90 bp | TATTGGACATTGCGATCTTCAGCCGCCACACCTTCACTCTCAGGGAGTTTGACTGGCGTCGTCACCCAGTaGCCCAGTTCCGTCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: YWTLRSSAATPSLSGSLTGVVTQ*PSSVPE Trigger: TTCAGGGACGGAACTGGGCCACTGGGTGACGACGCC...AGTCAAACTCCCTGAGAGTGAAGGTGTGGCGGCTGAAGATCGCAATGTCCAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| CDS-3UTR GCA 90 bp | TTATTGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTGCTTAAATCGCCCCAGTGCAGGTTaGGGCTGCCCGGGATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LLLTSQEDPEPGKWSCLNRPSAG*GCPGCP Trigger: CGGACATCCCGGGCAGCCGCAACCTGCACTGGGGCG...ATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| CDS-3UTR GCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATCTCTTTTCGCCCCAGTaGAGGTTGCGGCTGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: ASECFVAFYLTESHLRGYLFSPQ*RLRLPG Trigger: CCCGGGCAGCCGCAACCTGCACTGGGGCGAAAAGAG...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| 3UTR CAA 72 bp | CGATCTTCAGCCGCCACACCTTCACTCTCAGGGAGTTaGACTGCCCACTCAGAGGACTTCGGGTTTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: RSSAATPSLSGS*TAHSEDFGFLD Trigger: ATCTAAAAACCCGAAGTCCTCTGAGTGGGCAGTCAAACTCCCTGAGAGTGAAGGTGTGGCGGCTGAAGATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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| CDS-3UTR CCA 90 bp | GTAGTTTTTGCAGGAGCTGGAAATGTCTTTTCTGTTCTACAGCATCCACACCCAGGCGTCGTCACCCAGTaGCCCAGTTCCGTCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VVFAGAGNVFSVLQHPHPGVVTQ*PSSVPE Trigger: TTCAGGGACGGAACTGGGCCACTGGGTGACGACGCC...TGGGTGTGGATGCTGTAGAACAGAAAAGACATTTCCAGCTCCTGCAAAAACTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| CDS-3UTR GCA 90 bp | TTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCAGTGCAGGTTGCGGCTaGCCGGGATGTCCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLLLPFSLICLLHLFIFSAGCG*PGCPGA Trigger: CGCCCCCGGACATCCCGGGCAGCCGCAACCTGCACT...GAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR GCA 90 bp | CAATTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCCGCCCCAGTGCAGGTTaGGGCTGCCCGGGATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QFTLLLPFSLICLLHLFIRPSAG*GCPGCP Trigger: CGGACATCCCGGGCAGCCGCAACCTGCACTGGGGCG...GATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR TCA 90 bp | CACACCTTCACTCTCAGGGAGTTTGACTGCCCACTCAGAGGACTTCGGGTTTTTCCAAGTGTGACTCCCTaGACAATAAATGTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTFTLREFDCPLRGLRVFPSVTP*TINVLP Trigger: GGGAAGCACATTTATTGTTCAGGGAGTCACACTTGG...AAAAACCCGAAGTCCTCTGAGTGGGCAGTCAAACTCCCTGAGAGTGAAGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTTTTTGCAGGAGCTGGAAATGTCTTTTCTGTTCTACAGCATCCACACCCAGTGGAAGAAGGCGTTTaGTGTGAGGCACTCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVFAGAGNVFSVLQHPHPVEEGV*CEALPS Trigger: GCTTGGGAGTGCCTCACAGCAAACGCCTTCTTCCAC...TGGGTGTGGATGCTGTAGAACAGAAAAGACATTTCCAGCTCCTGCAAAAACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| 3UTR CAA 72 bp | TCGGACAACCGGGTCCTTCTACGGCAAAGCTTTTTATaGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDNRVLLRQSFL*LTSQEDPEPGK Trigger: TTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAAAAAGCTTTGCCGTAGAAGGACCCGGTTGTCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| 3UTR CAA 72 bp | CCAACAAAACTGGATGTCCATAATTCTTATTGGACATaGCGATCTTCAGCCGCCACACCTTCACTCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTKLDVHNSYWT*RSSAATPSLSG Trigger: CCCTGAGAGTGAAGGTGTGGCGGCTGAAGATCGCAATGTCCAATAAGAATTATGGACATCCAGTTTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR TCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATAGGGCTCTTGGTCCCTaGGTTTTGTTGAAGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ASECFVAFYLTESHLRGYRALGP*VLLKLY Trigger: GTATAGCTTCAACAAAACTCAGGGACCAAGAGCCCT...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR GCA 90 bp | AGCTCTCCAGAACTTCATGAAACAGCATCACCAGTTGGGGACCAGGTATTCAAAACTTATTATGCCTTCTaGTCCAAGTGTGACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPELHETASPVGDQVFKTYYAF*SKCDSL Trigger: CAGGGAGTCACACTTGGAGCAGAAGGCATAATAAGT...TTTGAATACCTGGTCCCCAACTGGTGATGCTGTTTCATGAAGTTCTGGAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATGCATCCAACATATTCTaGATGGGGCTAGTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASECFVAFYLTESHLRGYASNIF*MGLVLS Trigger: TGAGAGCACTAGCCCCATGCAGAATATGTTGGATGC...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| 3UTR CAA 72 bp | CATGTAACATCAGTGTTAGTTTGCATGCATTCTAGGTaGGGCAACACCTGCAGGCACTGCACTTCAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVTSVLVCMHSR*GNTCRHCTSVF Trigger: AAACACTGAAGTGCAGTGCCTGCAGGTGTTGCCCAACCTAGAATGCATGCAAACTAACACTGATGTTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR TCA 90 bp | GTAGTTTTTGCAGGAGCTGGAAATGTCTTTTCTGTTCTACAGCATCCACACCCATGTTGGGAAGATCAATaGAAACAGTGGAAGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VVFAGAGNVFSVLQHPHPCWEDQ*KQWKKA Trigger: CGCCTTCTTCCACTGTTTTCATTGATCTTCCCAACA...TGGGTGTGGATGCTGTAGAACAGAAAAGACATTTCCAGCTCCTGCAAAAACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR GCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATACTTATTATGCCTTCTaGTCCAAGTGTGACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASECFVAFYLTESHLRGYTYYAF*SKCDSL Trigger: CAGGGAGTCACACTTGGAGCAGAAGGCATAATAAGT...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR TCA 90 bp | ATGGTTAAATACAATTTAAACCCTTCAGCCACTGCTTACACAGTGCCAAAGCTACCAAGTGTGACTCCCTaGACAATAAATGTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVKYNLNPSATAYTVPKLPSVTP*TINVLP Trigger: GGGAAGCACATTTATTGTTCAGGGAGTCACACTTGG...TAGCTTTGGCACTGTGTAAGCAGTGGCTGAAGGGTTTAAATTGTATTTAACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR CCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATCAGAACTGTTTCCAGTaGGTAAAGTATAACGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASECFVAFYLTESHLRGYQNCFQ*VKYNVR Trigger: TCTGACGTTATACTTTACCCACTGGAAACAGTTCTG...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| 3UTR CAA 72 bp | GTTCTTGAGAGCCAGCATACATCAAATTCTCCGTACTaGGTGTATTTACCAAATAACAGGAAGGCACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLESQHTSNSPY*VYLPNNRKAPT Trigger: TGTTGGTGCCTTCCTGTTATTTGGTAAATACACCAAGTACGGAGAATTTGATGTATGCTGGCTCTCAAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR TCA 90 bp | TTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCAGGGCTCTTGGTCCCTaGGTTTTGTTGAAGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: FTLLLPFSLICLLHLFIFRALGP*VLLKLY Trigger: GTATAGCTTCAACAAAACTCAGGGACCAAGAGCCCT...GAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR TCA 90 bp | TTATTGCTTACTTCTCAGGAAGACCCTGAACCCGGAAAATGGAGCTGCTTAAATAGAAGGACAATCTTCTaGATGATGGAGCTGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLTSQEDPEPGKWSCLNRRTIF*MMELIM Trigger: CATTATCAGCTCCATCATTCAGAAGATTGTCCTTCT...ATTTAAGCAGCTCCATTTTCCGGGTTCAGGGTCTTCCTGAGAAGTAAGCAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCAGCCACTGCTTACACAGTGCCAAAGCTAATCACCAGTTCTTTTCAATTCTGTAAAGAGACTTaGAAGTCCAATACCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSATAYTVPKLITSSFQFCKET*KSNTKS Trigger: GGATTTGGTATTGGACTTGCAAGTCTCTTTACAGAA...TTGAAAAGAACTGGTGATTAGCTTTGGCACTGTGTAAGCAGTGGCTGAAGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR GCA 90 bp | GTAGTTTTTGCAGGAGCTGGAAATGTCTTTTCTGTTCTACAGCATCCACACCCAAACACTCCTTCCTCCTaGTTTATGGTATTTATACAG | + |
|
Preference number: 4 (lower is better) Translates to: VVFAGAGNVFSVLQHPHPNTPSS*FMVFIQ Trigger: CTGTATAAATACCATAAAGCAGGAGGAAGGAGTGTT...TGGGTGTGGATGCTGTAGAACAGAAAAGACATTTCCAGCTCCTGCAAAAACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR CCA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATCTTCCTCCTGCTTTATaGTATTTATACAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASECFVAFYLTESHLRGYLPPAL*YLYSLS Trigger: TGAGAGACTGTATAAATACCATAAAGCAGGAGGAAG...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR CCA 90 bp | ATGGTTAAATACAATTTAAACCCTTCAGCCACTGCTTACACAGTGCCAAAGCTACAGAATAAAAAGGCATaGCCACCATGTATGTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MVKYNLNPSATAYTVPKLQNKKA*PPCMLG Trigger: GCCTAACATACATGGTGGCCATGCCTTTTTATTCTG...TAGCTTTGGCACTGTGTAAGCAGTGGCTGAAGGGTTTAAATTGTATTTAACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| 3UTR CAA 72 bp | CAGAACTTTCATTTTGTTCCCTCTCAGATAAGTTCTTaGAGAAATGAAAGACAGGTGGGGCTCCTTAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: QNFHFVPSQISS*RNERQVGLLNV Trigger: TACGTTAAGGAGCCCCACCTGTCTTTCATTTCTCAAAGAACTTATCTGAGAGGGAACAAAATGAAAGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR GCA 90 bp | TCTCCGTACTTGGTGTATTTACCAAATAACAGGAAGGCACCAACAAAACTGGATTTCTGTAAAGAGACTTaGAAGTCCAATACCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPYLVYLPNNRKAPTKLDFCKET*KSNTKS Trigger: GGATTTGGTATTGGACTTGCAAGTCTCTTTACAGAA...ATCCAGTTTTGTTGGTGCCTTCCTGTTATTTGGTAAATACACCAAGTACGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR CCA 90 bp | TTTACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCCAGAATAAAAAGGCATaGCCACCATGTATGTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLLLPFSLICLLHLFIFQNKKA*PPCMLG Trigger: GCCTAACATACATGGTGGCCATGCCTTTTTATTCTG...GAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS TCA 90 bp | CGGGATGTCCGGGGGCGTCGTCACCCAGTGGCCCAGTTCCGTCCCTaGACCGAAGGAGCGCGCATGGAAAGGGCCGCCGAAAGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RDVRGRRHPVAQFRP*TEGARMERAAESRI Trigger: GATCCGGCTTTCGGCGGCCCTTTCCATGCGCGCTCCTTCGGTTCAGGGACGGAACTGGGCCACTGGGTGACGACGCCCCCGGACATCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS CCA 90 bp | TGCAGGTTGCGGCTGCCCGGGATGTCCGGGGGCGTCGTCACCCAGTaGCCCAGTTCCGTCCCTGAACCGAAGGAGCGCGCATGGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLRLPGMSGGVVTQ*PSSVPEPKERAWKG Trigger: CCCTTTCCATGCGCGCTCCTTCGGTTCAGGGACGGAACTGGGCCACTGGGTGACGACGCCCCCGGACATCCCGGGCAGCCGCAACCTGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS CCA 90 bp | GTCACCCAGTGGCCCAGTTCCGTCCCTGAACCGAAGGAGCGCGCATaGAAAGGGCCGCCGAAAGCCGGATCATCCCGAACGCCTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VTQWPSSVPEPKERA*KGPPKAGSSRTPPR Trigger: CCGGGGAGGCGTTCGGGATGATCCGGCTTTCGGCGGCCCTTTCCATGCGCGCTCCTTCGGTTCAGGGACGGAACTGGGCCACTGGGTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTCCAGAACTTCATGAAACAGCATCACCAGTTGGGGACCAGGTATTCAAATCGCCCCAGTGCAGGTaGCGGCTGCCCGGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPELHETASPVGDQVFKSPQCR*RLPGMS Trigger: GGACATCCCGGGCAGCCGCAACCTGCACTGGGGCGA...TTTGAATACCTGGTCCCCAACTGGTGATGCTGTTTCATGAAGTTCTGGAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR CAA 90 bp | ATACATCACTTTATTACAGAGTCTAATCCACCATGGGAACACATCAACTTCATTTCGCCCCAGTGCAGGTaGCGGCTGCCCGGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IHHFITESNPPWEHINFISPQCR*RLPGMS Trigger: GGACATCCCGGGCAGCCGCAACCTGCACTGGGGCGA...AATGAAGTTGATGTGTTCCCATGGTGGATTAGACTCTGTAATAAAGTGATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| CDS GCA 90 bp | GCAGCACTGTTGGGAAGATCAATGAAAACAGTGGAAGAAGGCGTTTaGTGTGAGGCACTCCCAAGCCTATCACTCGTCCAATTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AALLGRSMKTVEEGV*CEALPSLSLVQFLL Trigger: AAGAAGGAATTGGACGAGTGATAGGCTTGGGAGTGCCTCACAGCAAACGCCTTCTTCCACTGTTTTCATTGATCTTCCCAACAGTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS TCA 90 bp | ACTGTTGGGAAGATCAATGAAAACAGTGGAAGAAGGCGTTTGCTGTaGGGCACTCCCAAGCCTATCACTCGTCCAATTCCTTCTTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: TVGKINENSGRRRLL*GTPKPITRPIPSLT Trigger: TGTTAAAGAAGGAATTGGACGAGTGATAGGCTTGGGAGTGCCTCACAGCAAACGCCTTCTTCCACTGTTTTCATTGATCTTCCCAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS CCA 90 bp | TGTGCGTGTTCCTTGAATATGAAGACGATGCAGAACTGTTTCCAGTaGGTAAAGTATAACGTCAGAACAAAGGCTGGCAGCAAAGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CACSLNMKTMQNCFQ*VKYNVRTKAGSKVR Trigger: GCGAACTTTGCTGCCAGCCTTTGTTCTGACGTTATACTTTACCCACTGGAAACAGTTCTGCATCGTCTTCATATTCAAGGAACACGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS TCA 90 bp | GGTGTAAATTCACTTATTATGCCTTCTGCTCCAAGTGTGACTCCCTaGACAATAAATGTGCTTCCCATCCCTTTCCATAGGGCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVNSLIMPSAPSVTP*TINVLPIPFHRALG Trigger: ACCAAGAGCCCTATGGAAAGGGATGGGAAGCACATTTATTGTTCAGGGAGTCACACTTGGAGCAGAAGGCATAATAAGTGAATTTACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS CCA 90 bp | TATAACGTCAGAACAAAGGCTGGCAGCAAAGTTCGCAATAAGTTCTaGAAAATAGGCATCCAACATATTCTGCATGGGGCTAGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YNVRTKAGSKVRNKF*KIGIQHILHGASAL Trigger: GAGAGCACTAGCCCCATGCAGAATATGTTGGATGCCTATTTTCCAGAACTTATTGCGAACTTTGCTGCCAGCCTTTGTTCTGACGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR CAA 90 bp | GCGAGTGAGTGCTTTGTTGCATTCTACTTAACAGAATCACATCTACGGGGCTATCTCCATGCAGCACTGTaGGGAAGATCAATGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: ASECFVAFYLTESHLRGYLHAAL*GRSMKT Trigger: TGTTTTCATTGATCTTCCCAACAGTGCTGCATGGAG...ATAGCCCCGTAGATGTGATTCTGTTAAGTAGAATGCAACAAAGCACTCACTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR CAA 90 bp | TACCCTATTGTTACCGTTCAGCCTTATTTGCTTACTTCATCTCTTCATCTTCCCCTGTTTCGATCAGACTaGCAGAATAAAAAGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: YPIVTVQPYLLTSSLHLPLFRSD*QNKKAW Trigger: CCATGCCTTTTTATTCTGCAAGTCTGATCGAAACAG...GGGAAGATGAAGAGATGAAGTAAGCAAATAAGGCTGAACGGTAACAATAGGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTTAAATACAATTTAAACCCTTCAGCCACTGCTTACACAGTGCCAAAGCTAAATTGTGCGTGTTCCTaGAATATGAAGACGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MVKYNLNPSATAYTVPKLNCACS*NMKTMQ Trigger: CTGCATCGTCTTCATATTCAAGGAACACGCACAATT...TAGCTTTGGCACTGTGTAAGCAGTGGCTGAAGGGTTTAAATTGTATTTAACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS TCA 90 bp | TCTTGGTCCCTGAGTTTTGTTGAAGCTATACATAATGTTGATAATTaGAAATGGAGTGAGATGGTAATGCCGAGCATGGTAATTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWSLSFVEAIHNVDN*KWSEMVMPSMVIDL Trigger: CAGGTCAATTACCATGCTCGGCATTACCATCTCACTCCATTTTCAATTATCAACATTATGTATAGCTTCAACAAAACTCAGGGACCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS CCA 90 bp | TATGGTATTTATACAGTCTCTCATTCCCTCATACTGCGTATTAATTaGAAGTACTTCGTAGCCAAGGTCTGTGTTGTCAATAATTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YGIYTVSHSLILRIN*KYFVAKVCVVNNCA Trigger: CGCACAATTATTGACAACACAGACCTTGGCTACGAAGTACTTCCAATTAATACGCAGTATGAGGGAATGAGAGACTGTATAAATACCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS-3UTR CAA 90 bp | ATACATCACTTTATTACAGAGTCTAATCCACCATGGGAACACATCAACTTCATTCTGTTTCGATCAGACTaGCAGAATAAAAAGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: IHHFITESNPPWEHINFILFRSD*QNKKAW Trigger: CCATGCCTTTTTATTCTGCAAGTCTGATCGAAACAG...AATGAAGTTGATGTGTTCCCATGGTGGATTAGACTCTGTAATAAAGTGATGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS CCA 72 bp | CGGCTGCCCGGGATGTCCGGGGGCGTCGTCACCCAGTaGCCCAGTTCCGTCCCTGAACCGAAGGAGCGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLPGMSGGVVTQ*PSSVPEPKERA Trigger: TGCGCGCTCCTTCGGTTCAGGGACGGAACTGGGCCACTGGGTGACGACGCCCCCGGACATCCCGGGCAGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS TCA 72 bp | CGGGGGCGTCGTCACCCAGTGGCCCAGTTCCGTCCCTaGACCGAAGGAGCGCGCATGGAAAGGGCCGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGRRHPVAQFRP*TEGARMERAAE Trigger: TTCGGCGGCCCTTTCCATGCGCGCTCCTTCGGTTCAGGGACGGAACTGGGCCACTGGGTGACGACGCCCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
||
| CDS GCA 72 bp | TTGGGAAGATCAATGAAAACAGTGGAAGAAGGCGTTTaGTGTGAGGCACTCCCAAGCCTATCACTCGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGRSMKTVEEGV*CEALPSLSLVQ Trigger: TTGGACGAGTGATAGGCTTGGGAGTGCCTCACAGCAAACGCCTTCTTCCACTGTTTTCATTGATCTTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS TCA 72 bp | AAGATCAATGAAAACAGTGGAAGAAGGCGTTTGCTGTaGGGCACTCCCAAGCCTATCACTCGTCCAATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KINENSGRRRLL*GTPKPITRPIP Trigger: AGGAATTGGACGAGTGATAGGCTTGGGAGTGCCTCACAGCAAACGCCTTCTTCCACTGTTTTCATTGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS CAA 72 bp | GCCAAGGTCTGTGTTGTCAATAATTGTGCGTGTTCCTaGAATATGAAGACGATGCAGAACTGTTTCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AKVCVVNNCACS*NMKTMQNCFQW Trigger: CCACTGGAAACAGTTCTGCATCGTCTTCATATTCAAGGAACACGCACAATTATTGACAACACAGACCTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS CAA 90 bp | TACTTCGTAGCCAAGGTCTGTGTTGTCAATAATTGTGCGTGTTCCTaGAATATGAAGACGATGCAGAACTGTTTCCAGTGGGTAAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: YFVAKVCVVNNCACS*NMKTMQNCFQWVKY Trigger: ATACTTTACCCACTGGAAACAGTTCTGCATCGTCTTCATATTCAAGGAACACGCACAATTATTGACAACACAGACCTTGGCTACGAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
||
| CDS CCA 72 bp | TATACAGTCTCTCATTCCCTCATACTGCGTATTAATTaGAAGTACTTCGTAGCCAAGGTCTGTGTTGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: YTVSHSLILRIN*KYFVAKVCVVN Trigger: ATTGACAACACAGACCTTGGCTACGAAGTACTTCCAATTAATACGCAGTATGAGGGAATGAGAGACTGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060396.7 |
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| CDS CAA 72 bp | AGGAGAAGGTGTTCACCTATTTGTTTAGGGTTCAATTaGTGTGAAACCTCCCTCGGTAAAGGTGTAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: RRRCSPICLGFN*CETSLGKGVNS Trigger: TGAATTTACACCTTTACCGAGGGAGGTTTCACACAAATTGAACCCTAAACAAATAGGTGAACACCTTCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060396.7 ENSMUST00000233997.2 |
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| CDS CAA 90 bp | ACACATAATCTGACTCATAAACAGACTGTACTGTTTCGATCAGACTaGCAGAATAAAAAGGCATGGCCACCATGTATGTTAGGCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: THNLTHKQTVLFRSD*QNKKAWPPCMLGIS Trigger: TGAAATGCCTAACATACATGGTGGCCATGCCTTTTTATTCTGCAAGTCTGATCGAAACAGTACAGTCTGTTTATGAGTCAGATTATGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233997.2 |
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