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Pregenerated sensors for SLC25A43 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037636

Ensembl transcript IDs: ENSMUST00000047655.7

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCGGTGGCCCACAGCCCCAGGGAGTGGCTTTGCACCTTGCCGACTTaGGCCAGCACAGTGGCAAGCTCCAGGGGCGCGGTGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PVAHSPREWLCTLPT*ASTVASSRGAVRLR
Trigger: CCTCAGCCTCACCGCGCCCCTGGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 90 bp TCGGACAGCCACACCCGGCGTCCGGTGGCCCACAGCCCCAGGGAGTaGCTTTGCACCTTGCCGACTTGGGCCAGCACAGTGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SDSHTRRPVAHSPRE*LCTLPTWASTVASS
Trigger: GGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCGGACGCCGGGTGTGGCTGTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 90 bp GCCTGCATCTTTCTCTTCACAGTGTCAAAGGGAAAGGAGAGGGTCTaGCTCACAGCAGCAGCCACACAGACATTGGCAAAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ACIFLFTVSKGKERV*LTAAATQTLAKFCR
Trigger: CCTGCAGAACTTTGCCAATGTCTGTGTGGCTGCTGCTGTGAGCCAGACCCTCTCCTTTCCCTTTGACACTGTGAAGAGAAAGATGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS GCA 90 bp TTTGATGAGGTCTGTAGGGTATGTGACAATCGTGGAAACCATGCCTaGGAGACTTCCAGTCACAATGGAACTCCACTGGGAAATACGGCC +
Preference number: 5 (lower is better)
Translates to: FDEVCRVCDNRGNHA*ETSSHNGTPLGNTA
Trigger: GGCCGTATTTCCCAGTGGAGTTCCATTGTGACTGGAAGTCTCGCAGGCATGGTTTCCACGATTGTCACATACCCTACAGACCTCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CAA 90 bp ACCCGGCGTCCGGTGGCCCACAGCCCCAGGGAGTGGCTTTGCACCTaGCCGACTTGGGCCAGCACAGTGGCAAGCTCCAGGGGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: TRRPVAHSPREWLCT*PTWASTVASSRGAV
Trigger: CACCGCGCCCCTGGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCGGACGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 72 bp CTGAACGCCCCGGCCAGCCCCGCACACAGGAGCCGCTaGCTGCCGGTTAACCGGCCATCCCGTCTCCACGTA +
Preference number: 6 (lower is better)
Translates to: LNAPASPAHRSR*LPVNRPSRLHV
Trigger: TACGTGGAGACGGGATGGCCGGTTAACCGGCAGCCAGCGGCTCCTGTGTGCGGGGCTGGCCGGGGCGTTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CAA 90 bp CAGCCACACCCGGCGTCCGGTGGCCCACAGCCCCAGGGAGTGGCTTaGCACCTTGCCGACTTGGGCCAGCACAGTGGCAAGCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: QPHPASGGPQPQGVA*HLADLGQHSGKLQG
Trigger: CCCCTGGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCGGACGCCGGGTGTGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CAA 90 bp TCCGGTGGCCCACAGCCCCAGGGAGTGGCTTTGCACCTTGCCGACTaGGGCCAGCACAGTGGCAAGCTCCAGGGGCGCGGTGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SGGPQPQGVALHLAD*GQHSGKLQGRGEAE
Trigger: CTCAGCCTCACCGCGCCCCTGGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 72 bp CACACCCGGCGTCCGGTGGCCCACAGCCCCAGGGAGTaGCTTTGCACCTTGCCGACTTGGGCCAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: HTRRPVAHSPRE*LCTLPTWASTV
Trigger: CACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCGGACGCCGGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS GCA 72 bp CGGTGGCCCACAGCCCCAGGGAGTGGCTTTGCACCTTaGCGACTTGGGCCAGCACAGTGGCAAGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RWPTAPGSGFAP*RLGPAQWQAPG
Trigger: CCCTGGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGGGCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CAA 72 bp CCACAGCCCCAGGGAGTGGCTTTGCACCTTGCCGACTaGGGCCAGCACAGTGGCAAGCTCCAGGGGCGCGGT +
Preference number: 6 (lower is better)
Translates to: PQPQGVALHLAD*GQHSGKLQGRG
Trigger: ACCGCGCCCCTGGAGCTTGCCACTGTGCTGGCCCAAGTCGGCAAGGTGCAAAGCCACTCCCTGGGGCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS GCA 72 bp CAACGAACTTTCGGTAGGCGGCCAGCTGTACCATGCTaGAGGGGAAGAGGCGCAGGCAGGCCACGCCATTCC +
Preference number: 6 (lower is better)
Translates to: QRTFGRRPAVPC*RGRGAGRPRHS
Trigger: GGAATGGCGTGGCCTGCCTGCGCCTCTTCCCCTGCAGCATGGTACAGCTGGCCGCCTACCGAAAGTTCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS TCA 72 bp GCAGCAGCCACACAGACATTGGCAAAGTTCTGCAGGTaGGAAAAGCGGTCCCGGGGTCCATTCCAGACTTTT +
Preference number: 6 (lower is better)
Translates to: AAATQTLAKFCR*EKRSRGPFQTF
Trigger: AAAAGTCTGGAATGGACCCCGGGACCGCTTTTCTCACCTGCAGAACTTTGCCAATGTCTGTGTGGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 72 bp ATGCCTGCGAGACTTCCAGTCACAATGGAACTCCACTaGGAAATACGGCCCAGGTCATCCATGAATAGCACA +
Preference number: 6 (lower is better)
Translates to: MPARLPVTMELH*EIRPRSSMNST
Trigger: TGTGCTATTCATGGATGACCTGGGCCGTATTTCCCAGTGGAGTTCCATTGTGACTGGAAGTCTCGCAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 72 bp TTTCTCTTCACAGTGTCAAAGGGAAAGGAGAGGGTCTaGCTCACAGCAGCAGCCACACAGACATTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: FLFTVSKGKERV*LTAAATQTLAK
Trigger: CTTTGCCAATGTCTGTGTGGCTGCTGCTGTGAGCCAGACCCTCTCCTTTCCCTTTGACACTGTGAAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7
CDS CCA 72 bp CTGCGTTTGAAGAACTTCTTTAGCTCCCGTAATTCCTaGGGCTTCAAACTTTGGTCCACTCCTGGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: LRLKNFFSSRNS*GFKLWSTPGVS
Trigger: ACTGACCCCAGGAGTGGACCAAAGTTTGAAGCCCCAGGAATTACGGGAGCTAAAGAAGTTCTTCAAACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047655.7