Pregenerated sensors for SLC25A41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011486Ensembl transcript IDs: ENSMUST00000058661.14, ENSMUST00000169012.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCAAACCAAAATGGCCTTAAAGCCTGAGCCTTGGAGTGCTTTTTaGGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: LQTKMALKPEPWSAF*DSGTLGLPFSSCSG Trigger: CCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAGGCTTTAAGGCCATTTTGGTTTGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAAAGCCTTGGAGTGCTTTTaGAGACTCAGGGACACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: NWRTPSAFLIRVLGGFCKALECF*RLRDTG Trigger: CCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGC...TTTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| 3UTR TCA 72 bp | AAAATGGCCTTAAAGCCTGAGCCTTGGAGTGCTTTTTaGGACTCAGGGACACTGGGTCTTCCATTCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KMALKPEPWSAF*DSGTLGLPFSS Trigger: AGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAGGCTTTAAGGCCATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | CAATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAACGGACGCCGCCCTCCTaGACCAGGCTCCGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLEDSQRFSNPSPGWFLQRTPPS*TRLRSP Trigger: TGGACTGCGGAGCCTGGTCCAGGAGGGCGGCGTCCG...TTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGCGGACGCCGCCCTCCTaGACCAGGCTCCGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLFETQGHWVFHSLLVQRTPPS*TRLRSP Trigger: TGGACTGCGGAGCCTGGTCCAGGAGGGCGGCGTCCG...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCCTCCATGGGGTTTATaGGCGTCTGGGAGACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLEDSQRFSNPSPGWFLPPWGL*ASGRRP Trigger: TGGCCGTCTCCCAGACGCTCATAAACCCCATGGAGG...CAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR GCA 90 bp | CTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCAGGCCCTGTGCGAGACACTaGCCCAGCCATGGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFETQGHWVFHSLLVQGRPCARH*PSHGSR Trigger: TCTGGAGCCATGGCTGGGGCAGTGTCTCGCACAGGG...CCTGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCGAGGTGCTGTCCCTGTaGGAGACACTGCCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLFETQGHWVFHSLLVQGEVLSL*ETLPQP Trigger: TGGCTGGGGCAGTGTCTCGCACAGGGACAGCACCTC...GCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGCCTCCATGGGGTTTATaGGCGTCTGGGAGACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALECFLRLRDTGSSILFLPPWGL*ASGRRP Trigger: TGGCCGTCTCCCAGACGCTCATAAACCCCATGGAGG...CAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGTTACAGATGACAGGCTaGCGAGGCCACTGGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLEDSQRFSNPSPGWFLLQMTG*RGHWGP Trigger: AGGACCCCAGTGGCCTCGTCAGCCTGTCATCTGTAA...CAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGAGGTGCTGTCCCTGTaGGAGACACTGCCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLFETQGHWVFHSLLVQEVLSL*ETLPQP Trigger: TGGCTGGGGCAGTGTCTCGCACAGGGACAGCACCTC...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTGGCTCTGTCCAGAGGTaGTGTCCCTGTGCGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLGVLFETQGHWVFHSLGSVQR*CPCARH Trigger: GTGTCTCGCACAGGGACAGCACCTCTGGACAGAGCC...AAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGCACAGCCAGGGAGCCTaGGACGACCCGTTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVLFETQGHWVFHSLLVQHSQGA*DDPFLE Trigger: TTCCAGGAACGGGTCGTCGCAGGCTCCCTGGCTGTG...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTCACAGCCAGGGAGCCTaGGACGACCCGTTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLFETQGHWVFHSLLHSQGA*DDPFLE Trigger: TTCCAGGAACGGGTCGTCGCAGGCTCCCTGGCTGTG...AAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGAGCCCCGGCCAGCCCTaGTGGCTCAGTATCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLFETQGHWVFHSLLVQSPGQP*WLSILL Trigger: CAAGAGGATACTGAGCCAGCAGGGCTGGCCGGGGCT...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCAAGCCCCGGCCAGCCCTaGTGGCTCAGTATCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CFLRLRDTGSSILFLFRASPGQP*WLSILL Trigger: CAAGAGGATACTGAGCCAGCAGGGCTGGCCGGGGCT...TGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCCTGCATGTACACCCTaGCTCTGTCCAGAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLEDSQRFSNPSPGWFLPACTP*LCPEVL Trigger: CAGCACCTCTGGACAGAGCCAGGGTGTACATGCAGG...CAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGGGGTTTATGAGCGTCTaGGAGACGGCCACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALECFLRLRDTGSSILFLGFMSV*ETATAR Trigger: CCTGGCTGTGGCCGTCTCCCAGACGCTCATAAACCC...CAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGAGACTCCCTGCATGGTaGGGTTGGAGCCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALECFLRLRDTGSSILFLRLPAW*GWSPPQ Trigger: CTGTGGAGGGCTCCAACCCCACCATGCAGGGAGTCT...CAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCCCTGTGCGAGACACTaGCCCAGCCATGGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLFETQGHWVFHSLLVPCARH*PSHGSR Trigger: TCTGGAGCCATGGCTGGGGCAGTGTCTCGCACAGGG...AACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCTCTGTCCAGAGGTaGTGTCCCTGTGCGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GVLFETQGHWVFHSLLVQGSVQR*CPCARH Trigger: GTGTCTCGCACAGGGACAGCACCTCTGGACAGAGCC...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTTCCCTGCCCAACTTCTaGCACAGGCACTGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLGVLFETQGHWVFHSLSLPNF*HRHWSS Trigger: GCTACTCCAGTGCCTGTGGCAGAAGTTGGGCAGGGA...AAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCTCCCTGCCCAACTTCTaGCACAGGCACTGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLFETQGHWVFHSLLVQGSLPNF*HRHWSS Trigger: GCTACTCCAGTGCCTGTGGCAGAAGTTGGGCAGGGA...GCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCCTCTTGAAGACTCCCTaGATGGTGGGGTTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLFETQGHWVFHSLLVQGLLKTP*MVGLEP Trigger: GGGCTCCAACCCCACCATGCAGGGAGTCTTCAAGAG...GCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCAGGCCTGCATGTACACCCTaGCTCTGTCCAGAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFETQGHWVFHSLLVQGRPACTP*LCPEVL Trigger: CAGCACCTCTGGACAGAGCCAGGGTGTACATGCAGG...CCTGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | AATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAAAGGGTTTATGAGCGTCTaGGAGACGGCCACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NWRTPSAFLIRVLGGFCKGFMSV*ETATAR Trigger: CCTGGCTGTGGCCGTCTCCCAGACGCTCATAAACCC...TTTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | AGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTAGACTCCCTGCATGGTaGGGTTGGAGCCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLFETQGHWVFHSLLRLPAW*GWSPPQ Trigger: CTGTGGAGGGCTCCAACCCCACCATGCAGGGAGTCT...AAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | AATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAAAACAGGGACCATCAGCTaGTCTCCCGTGTCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NWRTPSAFLIRVLGGFCKTGTIS*SPVSRT Trigger: GGTTCTGGACACGGGAGAGCAGCTGATGGTCCCTGT...TTTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTGAGCCTGCATCCTTGTaGGCACCAAAGTCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLGVLFETQGHWVFHSLEPASL*APKSVG Trigger: ACCCACTGACTTTGGTGCGCACAAGGATGCAGGCTC...AAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTCTCTTGAAGACTCCCTaGATGGTGGGGTTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLFETQGHWVFHSLLLLKTP*MVGLEP Trigger: GGGCTCCAACCCCACCATGCAGGGAGTCTTCAAGAG...AAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCAGCGCACCAAAGTCAGTaGGTAACTGGCCATCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLRLRDTGSSILFLFRAAHQSQ*VTGHLA Trigger: GGCCAGATGGCCAGTTACCCACTGACTTTGGTGCGC...TGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTCCTGCATGGTGGGGTTaGAGCCCTCCACAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLFETQGHWVFHSLLPAWWG*SPPQCL Trigger: AAGACACTGTGGAGGGCTCCAACCCCACCATGCAGG...AAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGGTCAGCCGAGTCTTaGGTACCTCCATGGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GVLFETQGHWVFHSLLVQGSAES*VPPWGL Trigger: TAAACCCCATGGAGGTACTCAAGACTCGGCTGACCC...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCTTACAGATGACAGGCTaGCGAGGCCACTGGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LECFLRLRDTGSSILFLFLQMTG*RGHWGP Trigger: AGGACCCCAGTGGCCTCGTCAGCCTGTCATCTGTAA...GAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGTCCCGTTCCAAGATCTaGCTGGCACAGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ECFLRLRDTGSSILFLFRSRSKI*LAQSRS Trigger: GCTTCTGGACTGTGCCAGGCAGATCTTGGAACGGGA...CCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCATCCCGTTCCAAGATCTaGCTGGCACAGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLRLRDTGSSILFLFRASRSKI*LAQSRS Trigger: GCTTCTGGACTGTGCCAGGCAGATCTTGGAACGGGA...TGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | AATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAAAGAGCCTGCATCCTTGTaGGCACCAAAGTCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NWRTPSAFLIRVLGGFCKEPASL*APKSVG Trigger: ACCCACTGACTTTGGTGCGCACAAGGATGCAGGCTC...TTTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | GTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCGTTCCAAGATCTGCCTaGCACAGTCCAGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLFETQGHWVFHSLLVQGVPRSA*HSPEAL Trigger: AAGGGCTTCTGGACTGTGCCAGGCAGATCTTGGAAC...GCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCGCGCACCAAAGTCAGTaGGTAACTGGCCATCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LECFLRLRDTGSSILFLFAHQSQ*VTGHLA Trigger: GGCCAGATGGCCAGTTACCCACTGACTTTGGTGCGC...GAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCACTGGAAGAGCTGGGATaGGTGCACACCGTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLRLRDTGSSILFLFRALEELG*VHTVEE Trigger: TTCTTCTACGGTGTGCACTCATCCCAGCTCTTCCAG...TGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGCTGGAAGAGCTGGGATaGGTGCACACCGTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECFLRLRDTGSSILFLFRLEELG*VHTVEE Trigger: TTCTTCTACGGTGTGCACTCATCCCAGCTCTTCCAG...CCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGTTGGAGGAGTACACCTaGATGTACACCCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECFLRLRDTGSSILFLFRLEEYT*MYTLAL Trigger: CAGAGCCAGGGTGTACATGCAGGTGTACTCCTCCAA...CCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGAGAAGCCCTTTATACTaGCCAGTGAAGCGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALECFLRLRDTGSSILFLRSPLY*PVKRRV Trigger: GACCCTTCGCTTCACTGGCCAGTATAAAGGGCTTCT...CAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAATCTGGCCACAGGTCGTaGACAGTGTTACAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: QLEDSQRFSNPSPGWFLQSGHRS*TVLQMT Trigger: TGTCATCTGTAACACTGTCCACGACCTGTGGCCAGA...TTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTCTGGCCACAGGTCGTaGACAGTGTTACAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALECFLRLRDTGSSILFLSGHRS*TVLQMT Trigger: TGTCATCTGTAACACTGTCCACGACCTGTGGCCAGA...CAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTTTGGAGGAGTACACCTaGATGTACACCCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLFETQGHWVFHSLLVLEEYT*MYTLAL Trigger: CAGAGCCAGGGTGTACATGCAGGTGTACTCCTCCAA...AACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | CAATTGGAGGACTCCCAGCGCTTTTCTAATCCGAGTCCTGGGTGGTTTTTGCAACTTGATAGCATACTCTaGGGCGATCTTGAGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLEDSQRFSNPSPGWFLQLDSIL*GDLEHV Trigger: AACGTGCTCAAGATCGCCCCAGAGTATGCTATCAAG...TTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCGTTCCAAGATCTGCCTaGCACAGTCCAGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LECFLRLRDTGSSILFLFVPRSA*HSPEAL Trigger: AAGGGCTTCTGGACTGTGCCAGGCAGATCTTGGAAC...GAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTAGAAGCCCTTTATACTaGCCAGTGAAGCGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLFETQGHWVFHSLLVRSPLY*PVKRRV Trigger: GACCCTTCGCTTCACTGGCCAGTATAAAGGGCTTCT...AACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTACACCTTCAGTAAAGTaGGTGTCATGCCTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LSLGVLFETQGHWVFHSLTPSVK*VSCLCT Trigger: TGTACAGAGGCATGACACCCACTTTACTGAAGGTGT...AAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCACACCTTCAGTAAAGTaGGTGTCATGCCTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LECFLRLRDTGSSILFLFTPSVK*VSCLCT Trigger: TGTACAGAGGCATGACACCCACTTTACTGAAGGTGT...GAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS TCA 90 bp | TGGCCATCTGGCCACAGGTCGTGGACAGTGTTACAGATGACAGGCTaGCGAGGCCACTGGGGTCCTTCATGTCCCTGCCCAACTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WPSGHRSWTVLQMTG*RGHWGPSCPCPTSA Trigger: GGCAGAAGTTGGGCAGGGACATGAAGGACCCCAGTGGCCTCGTCAGCCTGTCATCTGTAACACTGTCCACGACCTGTGGCCAGATGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS GCA 90 bp | ACACCTGCATGTACACCCTGGCTCTGTCCAGAGGTGCTGTCCCTGTaGGAGACACTGCCCCAGCCATGGCTCCAGAGAGCAGAAACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPACTPWLCPEVLSL*ETLPQPWLQRAETS Trigger: GGAAGTTTCTGCTCTCTGGAGCCATGGCTGGGGCAGTGTCTCGCACAGGGACAGCACCTCTGGACAGAGCCAGGGTGTACATGCAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CCA 90 bp | AGTAAAGTGGGTGTCATGCCTCTGTACAGCCCCGGCCAGCCCTGCTaGCTCAGTATCCTCTTGAAGACTCCCTGCATGGTGGGGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKVGVMPLYSPGQPC*LSILLKTPCMVGLE Trigger: CTCCAACCCCACCATGCAGGGAGTCTTCAAGAGGATACTGAGCCAGCAGGGCTGGCCGGGGCTGTACAGAGGCATGACACCCACTTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS TCA 90 bp | CACAGCCAGGGAGCCTGCGACGACCCGTTCCTGGAAGAGCTGGGATaGGTGCACACCGTAGAAGAAATTCTTAGACTGCTCACAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSQGACDDPFLEELG*VHTVEEILRLLTDR Trigger: TCTGTCTGTGAGCAGTCTAAGAATTTCTTCTACGGTGTGCACTCATCCCAGCTCTTCCAGGAACGGGTCGTCGCAGGCTCCCTGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CCA 90 bp | TCCCGTTCCAAGATCTGCCTGGCACAGTCCAGAAGCCCTTTATACTaGCCAGTGAAGCGAAGGGTCAGCCGAGTCTTGAGTACCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRSKICLAQSRSPLY*PVKRRVSRVLSTSM Trigger: CATGGAGGTACTCAAGACTCGGCTGACCCTTCGCTTCACTGGCCAGTATAAAGGGCTTCTGGACTGTGCCAGGCAGATCTTGGAACGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCCCCTGCATGGTGGGGTaGGAGCCCTCCACAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LECFLRLRDTGSSILFLFPCMVG*EPSTVS Trigger: AGACACTGTGGAGGGCTCCAACCCCACCATGCAGGG...GAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS TCA 90 bp | CTTGTACACCCAGGGTTTTCTTCATGGCTTCATACACCAGGTAGCTaGTGCCGCCTGCTGGCAACACCTTCAGTAAAGTGGGTGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LVHPGFSSWLHTPGS*CRLLATPSVKWVSC Trigger: GCATGACACCCACTTTACTGAAGGTGTTGCCAGCAGGCGGCATCAGCTACCTGGTGTATGAAGCCATGAAGAAAACCCTGGGTGTACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCAGGTGGCTCAGTATCCTCTaGAAGACTCCCTGCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFETQGHWVFHSLLVQGRWLSIL*KTPCMV Trigger: CACCATGCAGGGAGTCTTCAAGAGGATACTGAGCCA...CCTGCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGGCTTCCACAGGGTCCCCTaGTTTTCCTCTTCCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLFETQGHWVFHSLLVQGFHRVP*FSSSKT Trigger: TGTCTTGGAAGAGGAAAACAAGGGGACCCTGTGGAA...GCCCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTTTCCACAGGGTCCCCTaGTTTTCCTCTTCCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSLGVLFETQGHWVFHSLFHRVP*FSSSKT Trigger: TGTCTTGGAAGAGGAAAACAAGGGGACCCTGTGGAA...AAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGGTGGCTCAGTATCCTCTaGAAGACTCCCTGCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ECFLRLRDTGSSILFLFRWLSIL*KTPCMV Trigger: CACCATGCAGGGAGTCTTCAAGAGGATACTGAGCCA...CCTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTGGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTTTTCTGAAGTTGCTCTaGGAGGAGTACACCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SLGVLFETQGHWVFHSLLFLKLL*EEYTCM Trigger: CATGCAGGTGTACTCCTCCAAGAGCAACTTCAGAAA...AAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCCAAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS-3UTR CAA 90 bp | GGAGTGCTTTTTGAGACTCAGGGACACTGGGTCTTCCATTCTCTTCTTGTTCAGTTTCTGAAGTTGCTCTaGGAGGAGTACACCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GVLFETQGHWVFHSLLVQFLKLL*EEYTCM Trigger: CATGCAGGTGTACTCCTCCAAGAGCAACTTCAGAAA...CTGAACAAGAAGAGAATGGAAGACCCAGTGTCCCTGAGTCTCAAAAAGCACTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CAA 90 bp | ATGCCTCTGTACAGCCCCGGCCAGCCCTGCTGGCTCAGTATCCTCTaGAAGACTCCCTGCATGGTGGGGTTGGAGCCCTCCACAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MPLYSPGQPCWLSIL*KTPCMVGLEPSTVS Trigger: AGACACTGTGGAGGGCTCCAACCCCACCATGCAGGGAGTCTTCAAGAGGATACTGAGCCAGCAGGGCTGGCCGGGGCTGTACAGAGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS TCA 72 bp | GGCCACAGGTCGTGGACAGTGTTACAGATGACAGGCTaGCGAGGCCACTGGGGTCCTTCATGTCCCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GHRSWTVLQMTG*RGHWGPSCPCP Trigger: TGGGCAGGGACATGAAGGACCCCAGTGGCCTCGTCAGCCTGTCATCTGTAACACTGTCCACGACCTGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS GCA 72 bp | GGCTCTGTCCAGAGGTGCTGTCCCTGTGCGAGACACTaGCCCAGCCATGGCTCCAGAGAGCAGAAACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSVQRCCPCARH*PSHGSREQKLP Trigger: TGGAAGTTTCTGCTCTCTGGAGCCATGGCTGGGGCAGTGTCTCGCACAGGGACAGCACCTCTGGACAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS GCA 72 bp | GTGGGTGTCATGCCTCTGTACAGCCCCGGCCAGCCCTaGTGGCTCAGTATCCTCTTGAAGACTCCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: VGVMPLYSPGQP*WLSILLKTPCM Trigger: CATGCAGGGAGTCTTCAAGAGGATACTGAGCCAGCAGGGCTGGCCGGGGCTGTACAGAGGCATGACACCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CCA 72 bp | GGTGTCATGCCTCTGTACAGCCCCGGCCAGCCCTGCTaGCTCAGTATCCTCTTGAAGACTCCCTGCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GVMPLYSPGQPC*LSILLKTPCMV Trigger: CACCATGCAGGGAGTCTTCAAGAGGATACTGAGCCAGCAGGGCTGGCCGGGGCTGTACAGAGGCATGACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS TCA 72 bp | GGCCATCTGGCCACAGGTCGTGGACAGTGTTACAGATaGCAGGCTGACGAGGCCACTGGGGTCCTTCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: GHLATGRGQCYR*QADEATGVLHV Trigger: GACATGAAGGACCCCAGTGGCCTCGTCAGCCTGTCATCTGTAACACTGTCCACGACCTGTGGCCAGATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CAA 90 bp | TGGACCAGGCTCCGCAGTCCACTCAGCAGGTTTCTGAAGTTGCTCTaGGAGGAGTACACCTGCATGTACACCCTGGCTCTGTCCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WTRLRSPLSRFLKLL*EEYTCMYTLALSRG Trigger: ACCTCTGGACAGAGCCAGGGTGTACATGCAGGTGTACTCCTCCAAGAGCAACTTCAGAAACCTGCTGAGTGGACTGCGGAGCCTGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS GCA 72 bp | CGGTATAGGGCTCGGGTACCATCCCGTTCCAAGATCTaGCTGGCACAGTCCAGAAGCCCTTTATACTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RYRARVPSRSKI*LAQSRSPLYWP Trigger: TGGCCAGTATAAAGGGCTTCTGGACTGTGCCAGGCAGATCTTGGAACGGGATGGTACCCGAGCCCTATACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CCA 72 bp | AGTTGCTCTTGGAGGAGTACACCTGCATGTACACCCTaGCTCTGTCCAGAGGTGCTGTCCCTGTGCGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SCSWRSTPACTP*LCPEVLSLCET Trigger: TGTCTCGCACAGGGACAGCACCTCTGGACAGAGCCAGGGTGTACATGCAGGTGTACTCCTCCAAGAGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS GCA 72 bp | TTTTCCTCTTCCAAGACATCCACAGGGACCATCAGCTaGTCTCCCGTGTCCAGAACCTCGAGATGGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSKTSTGTIS*SPVSRTSRWTP Trigger: GGGAGTCCATCTCGAGGTTCTGGACACGGGAGAGCAGCTGATGGTCCCTGTGGATGTCTTGGAAGAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058661.14 |
||
| CDS CAA 72 bp | CTCCGCAGTCCACTCAGCAGGTTTCTGAAGTTGCTCTaGGAGGAGTACACCTGCATGTACACCCTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRSPLSRFLKLL*EEYTCMYTLAL Trigger: CAGAGCCAGGGTGTACATGCAGGTGTACTCCTCCAAGAGCAACTTCAGAAACCTGCTGAGTGGACTGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS CCA 72 bp | AAGATCTGCCTGGCACAGTCCAGAAGCCCTTTATACTaGCCAGTGAAGCGAAGGGTCAGCCGAGTCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KICLAQSRSPLY*PVKRRVSRVLS Trigger: ACTCAAGACTCGGCTGACCCTTCGCTTCACTGGCCAGTATAAAGGGCTTCTGGACTGTGCCAGGCAGATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||
| CDS TCA 72 bp | CCAGGGTTTTCTTCATGGCTTCATACACCAGGTAGCTaGTGCCGCCTGCTGGCAACACCTTCAGTAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGFSSWLHTPGS*CRLLATPSVKW Trigger: CCACTTTACTGAAGGTGTTGCCAGCAGGCGGCATCAGCTACCTGGTGTATGAAGCCATGAAGAAAACCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058661.14 ENSMUST00000169012.2 |
||