Pregenerated sensors for SLC25A40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054099Ensembl transcript IDs: ENSMUST00000066921.10, ENSMUST00000170496.6, ENSMUST00000196727.5, ENSMUST00000198792.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGCATTCTCATCATACTTAAAATCTCATTCCTGAGCTCAGTGTaGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTGAGTTCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: PCILIILKISFLSSV*ERARAAKPDHLSSN Trigger: ATTTGAACTCAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTATGATGAGAATGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR GCA 90 bp | ATATTTGCACTCAGAAAACTTGTCCTGTTAAGGAGCAACTTTCTTTaGAAGAGTACTAAGTGGCTGCAGTTTCTGGATTATGTTTTTAAT | + |
|
Preference number: 1 (lower is better) Translates to: IFALRKLVLLRSNFL*KSTKWLQFLDYVFN Trigger: ATTAAAAACATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCTTAACAGGACAAGTTTTCTGAGTGCAAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR GCA 90 bp | ATATCCAAAGGTGCAGGAAATTTACAATATTCATTCGTCCACAGTTaGGTCTGTTTCTGTGTTTTTACTACATCAAATGGTAAAGTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: ISKGAGNLQYSFVHS*VCFCVFTTSNGKVA Trigger: TGCAACTTTACCATTTGATGTAGTAAAAACACAGAAACAGACGCAACTGTGGACGAATGAATATTGTAAATTTCCTGCACCTTTGGATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTGAGTTCACCAAAGTCCACAAGGTaGAATGGGAGAACTAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSSVWERARAAKPDHLSSPKSTR*NGRTNS Trigger: AGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGG...TGAACTCAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTGAGTTCATGCAAGAGTACTAAGTaGCTGCAGTTTCTGGATTAT | + |
|
Preference number: 2 (lower is better) Translates to: LSSVWERARAAKPDHLSSCKSTK*LQFLDY Trigger: ATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCA...TGAACTCAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR TCA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGACCATCTGGGGAATGTaGACAATGCCACATGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: ILKISFLSSVWERARAAKTIWGM*TMPHDS Trigger: GCTATCATGTGGCATTGTTCACATTCCCCAGATGGT...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGTGCAAGAGTACTAAGTaGCTGCAGTTTCTGGATTAT | + |
|
Preference number: 2 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWCKSTK*LQFLDY Trigger: ATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCA...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGATTGAAATTTGCGTGGAACTGCACTTAGCTCTCTACACTGCAGTGCTTAGTCTAAGCCTGACCACCTaGGTTCAAATCCCAAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: MIEICVELHLALYTAVLSLSLTT*VQIPKS Trigger: GGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAG...ACTAAGCACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGATTGAAATTTGCGTGGAACTGCACTTAGCTCTCTACACTGCAGTGCTTAGTACCATCTGGGGAATGTaGACAATGCCACATGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: MIEICVELHLALYTAVLSTIWGM*TMPHDS Trigger: GCTATCATGTGGCATTGTTCACATTCCCCAGATGGT...ACTAAGCACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTCTGTATGCTGTCACCTaGGTGAAGGTGTGGGATTAT | + |
|
Preference number: 2 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFLYAVT*VKVWDY Trigger: ATAATCCCACACCTTCACTCAGGTGACAGCATACAG...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAAAACTTCTTAGACTaGACCTTAGTTCTGATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWENFLD*TLVLIN Trigger: ATTGATCAGAACTAAGGTGCAGTCTAAGAAGTTTTC...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTACCATCTGGGGAATGTaGACAATGCCACATGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSTIWGM*TMPHDS Trigger: GCTATCATGTGGCATTGTTCACATTCCCCAGATGGT...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTCATTATAGTCCAGGTTaGCATATCCAAAGGTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFHYSPG*HIQRCR Trigger: CCTGCACCTTTGGATATGTCAACCTGGACTATAATG...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGAACCCCAGCAACTATTaGTATTCGGGTTTCATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ILKISFLSSVWERARAAKNPSNY*YSGFIF Trigger: GAAAATGAAACCCGAATACCAATAGTTGCTGGGGTT...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTAGGAGCAACTTTCTTTaGAAGAGTACTAAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFRSNFL*KSTKWL Trigger: CAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCT...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCGACTTTCAACATTTTaGTTCTGGAAGAACGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: ILKISFLSSVWERARAAKRLSTF*FWKNDF Trigger: AAAGTCGTTCTTCCAGAAGCAAAATGTTGAAAGTCG...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | ATGATTGAAATTTGCGTGGAACTGCACTTAGCTCTCTACACTGCAGTGCTTAGTAGAGTACTAAGTGGCTaGAGTTTCTGGATTATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: MIEICVELHLALYTAVLSRVLSG*SFWIMF Trigger: AAACATAATCCAGAAACTGCAGCCACTTAGTACTCT...ACTAAGCACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACAAGGAGCAACTTTCTTTaGAAGAGTACTAAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KSVTGVREHNVPELKTLTRSNFL*KSTKWL Trigger: CAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCT...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTGCCTGTAATGATATTTaGACTCAGAAAACTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFACNDI*TQKTCP Trigger: AGGACAAGTTTTCTGAGTGCAAATATCATTACAGGC...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR CAA 90 bp | AGCCCATTCCTGCTTGTACATTTGCATCATGTAAATGATTATACTTaGGTTCACACAGATAAAGTGGCTGCACTTTTCATTAGGGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: SPFLLVHLHHVNDYT*VHTDKVAALFIRDF Trigger: GAAGTCCCTAATGAAAAGTGCAGCCACTTTATCTGTGTGAACCAAAGTATAATCATTTACATGATGCAAATGTACAAGCAGGAATGGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAGTTGCGTCTGTTTCTGTGTTTTTACTACATCAAATGGTAAAGTTGCAATGCAAGAGTACTAAGTaGCTGCAGTTTCTGGATTAT | + |
|
Preference number: 2 (lower is better) Translates to: STVASVSVFLLHQMVKLQCKSTK*LQFLDY Trigger: ATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCA...TTGCAACTTTACCATTTGATGTAGTAAAAACACAGAAACAGACGCAACTGTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR CAA 90 bp | TTAACTAATCGAGGAATTAGACCTGTAAATAACCCAGAAAATCCTTaGTCAGCAACAATGTTCTTCATTATAGTCCAGGTTGACATATCC | + |
|
Preference number: 2 (lower is better) Translates to: LTNRGIRPVNNPENP*SATMFFIIVQVDIS Trigger: GGATATGTCAACCTGGACTATAATGAAGAACATTGTTGCTGACAAAGGATTTTCTGGGTTATTTACAGGTCTAATTCCTCGATTAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAAATGTCCATCATAAGAATTACCGACTTTCAACATTTTGCTTCTGGAAGAAGAGTACTAAGTGGCTaGAGTTTCTGGATTATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CQMSIIRITDFQHFASGRRVLSG*SFWIMF Trigger: AAACATAATCCAGAAACTGCAGCCACTTAGTACTCT...TCTTCCAGAAGCAAAATGTTGAAAGTCGGTAATTCTTATGATGGACATTTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR TCA 72 bp | TGTGGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTaGGTTCAAATCCCAAAGTCCACAAGGTGGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: CGKGHVLLSLTT*VQIPKSTRWNG Trigger: CCCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR CCA 72 bp | CTCATCATACTTAAAATCTCATTCCTGAGCTCAGTGTaGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LIILKISFLSSV*ERARAAKPDHL Trigger: CAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTATGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGCCGACTTTCAACATTTaGCTTCTGGAAGAACGACTT | + |
|
Preference number: 3 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWPTFNI*LLEERL Trigger: AAGTCGTTCTTCCAGAAGCAAAATGTTGAAAGTCGG...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR TCA 72 bp | GAATTAAAGACGTTAACAGGCACCATCTGGGGAATGTaGACAATGCCACATGATAGCTCTTCCACTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ELKTLTGTIWGM*TMPHDSSSTLY Trigger: GTAAAGAGTGGAAGAGCTATCATGTGGCATTGTTCACATTCCCCAGATGGTGCCTGTTAACGTCTTTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR TCA 72 bp | ATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTaGGTGAAGGTGTGGGATTATAACAACATCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: MFLCACVLYAVT*VKVWDYNNIIL Trigger: CAAAATGATGTTGTTATAATCCCACACCTTCACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR GCA 72 bp | CTCTTTACTGAAATGCTGAGACTTATGATTGAAATTTaGGTGGAACTGCACTTAGCTCTCTACACTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFTEMLRLMIEI*VELHLALYTAV Trigger: CACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCATAAGTCTCAGCATTTCAGTAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGATTGAAATTTGCGTGGAACTGCACTTAGCTCTCTACACTGCAGTGCTTAGTCATCAAATGGTAAAGTaGCAACAGCTGCAAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: MIEICVELHLALYTAVLSHQMVK*QQLQKN Trigger: GTTCTTTTGCAGCTGTTGCAACTTTACCATTTGATG...ACTAAGCACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTAACCCAGAAAATCCTTaGTCAGCAACAATGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSNPENP*SATMFF Trigger: GAAGAACATTGTTGCTGACAAAGGATTTTCTGGGTT...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR GCA 72 bp | CTCAGAAAACTTGTCCTGTTAAGGAGCAACTTTCTTTaGAAGAGTACTAAGTGGCTGCAGTTTCTGGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: LRKLVLLRSNFL*KSTKWLQFLDY Trigger: ATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCTTAACAGGACAAGTTTTCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR-3UTR CAA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACAAATTATACCAGTACATaGCTGAGAAAGGCACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: KSVTGVREHNVPELKTLTNYTST*LRKAHL Trigger: GAGATGTGCCTTTCTCAGCAATGTACTGGTATAATT...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTGCTCCTGAAGTAAAGTaGATCATAAATGTTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSAPEVK*IINVGS Trigger: TGAACCAACATTTATGATCAACTTTACTTCAGGAGC...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| 3UTR CCA 72 bp | CATCATAAGAATTACCGACTTTCAACATTTTGCTTCTaGAAGAACGACTTTCCTAATTCATATGAACTGATC | + |
|
Preference number: 3 (lower is better) Translates to: HHKNYRLSTFCF*KNDFPNSYELI Trigger: GATCAGTTCATATGAATTAGGAAAGTCGTTCTTCCAGAAGCAAAATGTTGAAAGTCGGTAATTCTTATGATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGTCACAGACACACATGTaGTCCATGAGTCCATTACTG | + |
|
Preference number: 4 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWSQTHM*SMSPLL Trigger: CAGTAATGGACTCATGGATCACATGTGTGTCTGTGA...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGCATTATAGTCCAGGTTaGCATATCCAAAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWHYSPG*HIQRCR Trigger: CCTGCACCTTTGGATATGTCAACCTGGACTATAATG...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTGTTAAGGAGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGCTTTCCTTTGGGGAATaGGTTGTTCTGGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLRSNFLCKSTKWLQFLLSFGE*VVLGLE Trigger: CTCCAGGCCCAGAACAACCCATTCCCCAAAGGAAAG...CAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCTTAACAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTGAGTTCATCAACATTTTGCTTCTaGAAGAACGACTTTCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVWERARAAKPDHLSSSTFCF*KNDFPN Trigger: ATTAGGAAAGTCGTTCTTCCAGAAGCAAAATGTTGA...TGAACTCAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGAACCCCAGCAACTATTaGTATTCGGGTTTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWNPSNY*YSGFIF Trigger: GAAAATGAAACCCGAATACCAATAGTTGCTGGGGTT...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR TCA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCATTATAGTCCAGGTTaGCATATCCAAAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKISFLSSVWERARAAKHYSPG*HIQRCR Trigger: CCTGCACCTTTGGATATGTCAACCTGGACTATAATG...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCCCACGGAAGTTTCCTaGCTTCTTATACCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKISFLSSVWERARAAKPTEVS*LLIPCF Trigger: AAAGCATGGTATAAGAAGCCAGGAAACTTCCGTGGG...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CCA 90 bp | GTCCTGTTAAGGAGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGGGGTTGTTCTGGGCCTaGAGTCGAATTTTAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLRSNFLCKSTKWLQFLGLFWA*SRILTT Trigger: TGTTGTTAAAATTCGACTCCAGGCCCAGAACAACCC...CAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCTTAACAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CCA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGAAAAACACTTTCCTTTaGGGAATGGGTTGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKISFLSSVWERARAAKKNTFL*GMGCSG Trigger: CCCAGAACAACCCATTCCCCAAAGGAAAGTGTTTTT...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTCATTACTTTGGGGAATaGGTTGTTCTGGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSHYFGE*VVLGLE Trigger: CTCCAGGCCCAGAACAACCCATTCCCCAAAGTAATG...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGTTAAGGAGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGTATACCATGCTTTCTTaGTCTCCTCTTCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLRSNFLCKSTKWLQFLYTMLS*SPLHRH Trigger: GTGTCTGTGAAGAGGAGAGCAAGAAAGCATGGTATA...CAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCTTAACAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CCA 90 bp | ATGATTGAAATTTGCGTGGAACTGCACTTAGCTCTCTACACTGCAGTGCTTAGTGGGTTGTTCTGGGCCTaGAGTCGAATTTTAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: MIEICVELHLALYTAVLSGLFWA*SRILTT Trigger: TGTTGTTAAAATTCGACTCCAGGCCCAGAACAACCC...ACTAAGCACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CCA 90 bp | AGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGGATTATGTTTTTCTTTCCTTTGGGGAATaGGTTGTTCTGGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNFLCKSTKWLQFLDYVFLSFGE*VVLGLE Trigger: CTCCAGGCCCAGAACAACCCATTCCCCAAAGGAAAG...AAAAACATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTCCCACGGAAGTTTCCTaGCTTCTTATACCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFPTEVS*LLIPCF Trigger: AAAGCATGGTATAAGAAGCCAGGAAACTTCCGTGGG...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| 3UTR CAA 72 bp | TTACCGCACCAAATCTGGCGACAACCCCAGCAACTATaGGTATTCGGGTTTCATTTTCTCCTAATTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPHQIWRQPQQL*VFGFHFLLIWF Trigger: AAACCAAATTAGGAGAAAATGAAACCCGAATACCAATAGTTGCTGGGGTTGTCGCCAGATTTGGTGCGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTTATACCATGCTTTCTTaGTCTCCTCTTCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFYTMLS*SPLHRH Trigger: GTGTCTGTGAAGAGGAGAGCAAGAAAGCATGGTATA...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR TCA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACATCACAGACACACATGTaGTCCATGAGTCCATTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KSVTGVREHNVPELKTLTSQTHM*SMSPLL Trigger: CAGTAATGGACTCATGGATCACATGTGTGTCTGTGA...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTTATACCATGCTTTCTTaGTCTCCTCTTCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSYTMLS*SPLHRH Trigger: GTGTCTGTGAAGAGGAGAGCAAGAAAGCATGGTATA...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTAAAAACACTTTCCTTTaGGGAATGGGTTGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSKNTFL*GMGCSG Trigger: CCCAGAACAACCCATTCCCCAAAGGAAAGTGTTTTT...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACACCCACGGAAGTTTCCTaGCTTCTTATACCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVTGVREHNVPELKTLTPTEVS*LLIPCF Trigger: AAAGCATGGTATAAGAAGCCAGGAAACTTCCGTGGG...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGTTAAGGAGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGGAAAACTTCTTAGACTaGACCTTAGTTCTGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLRSNFLCKSTKWLQFLENFLD*TLVLIN Trigger: ATTGATCAGAACTAAGGTGCAGTCTAAGAAGTTTTC...CAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCTCCTTAACAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTCGACTTTCAACATTTTaGTTCTGGAAGAACGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFRLSTF*FWKNDF Trigger: AAAGTCGTTCTTCCAGAAGCAAAATGTTGAAAGTCG...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | AGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGGATTATGTTTTTGGGTTGTTCTGGGCCTaGAGTCGAATTTTAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNFLCKSTKWLQFLDYVFGLFWA*SRILTT Trigger: TGTTGTTAAAATTCGACTCCAGGCCCAGAACAACCC...AAAAACATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTAACCCCAGCAACTATTaGTATTCGGGTTTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSNPSNY*YSGFIF Trigger: GAAAATGAAACCCGAATACCAATAGTTGCTGGGGTT...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGTGTTTTTACTACATCAAATGGTAAAGTTGCAACAGCTGCAAAAGAACTCACAGACACACATGTaGTCCATGAGTCCATTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVFLLHQMVKLQQLQKNSQTHM*SMSPLL Trigger: AAGTAATGGACTCATGGATCACATGTGTGTCTGTGA...GTTCTTTTGCAGCTGTTGCAACTTTACCATTTGATGTAGTAAAAACACAGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACACGACTTTCAACATTTTaGTTCTGGAAGAACGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVTGVREHNVPELKTLTRLSTF*FWKNDF Trigger: AAAGTCGTTCTTCCAGAAGCAAAATGTTGAAAGTCG...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CCA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACATCAACATTTTGCTTCTaGAAGAACGACTTTCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVTGVREHNVPELKTLTSTFCF*KNDFPN Trigger: ATTAGGAAAGTCGTTCTTCCAGAAGCAAAATGTTGA...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR GCA 90 bp | AGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGGATTATGTTTTTGAAAACTTCTTAGACTaGACCTTAGTTCTGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNFLCKSTKWLQFLDYVFENFLD*TLVLIN Trigger: ATTGATCAGAACTAAGGTGCAGTCTAAGAAGTTTTC...AAAAACATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| 3UTR CAA 72 bp | GCTGCAAAAGAACCAGACAATGCTCCTGAAGTAAAGTaGATCATAAATGTTGGTTCATATAAACCAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAKEPDNAPEVK*IINVGSYKPDF Trigger: GAAATCTGGTTTATATGAACCAACATTTATGATCAACTTTACTTCAGGAGCATTGTCTGGTTCTTTTGCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS-3UTR CAA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGGAGTCACTGGGATaGTTGGTGGCGGCCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWEESLG*LVAALQ Trigger: CTGAAGGGCCGCCACCAACAATCCCAGTGACTCCTC...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CAA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGCCTTTGGGGAATGGGTaGTTCTGGGCCTGGAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWPLGNG*FWAWSR Trigger: TCGACTCCAGGCCCAGAACAACCCATTCCCCAAAGG...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | GTTCAAATCCCAAAGTCCACAAGGTGGAATGGGAGAACTAACTCTTCAAGGTTTGAGGAGTCACTGGGATaGTTGGTGGCGGCCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQIPKSTRWNGRTNSSRFEESLG*LVAALQ Trigger: CTGAAGGGCCGCCACCAACAATCCCAGTGACTCCTC...AAACCTTGAAGAGTTAGTTCTCCCATTCCACCTTGTGGACTTTGGGATTTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGCCTGACCACCTGAGTTCAAATTATACCAGTACATaGCTGAGAAAGGCACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSVWERARAAKPDHLSSNYTST*LRKAHL Trigger: GAGATGTGCCTTTCTCAGCAATGTACTGGTATAATT...TGAACTCAGGTGGTCAGGCTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS TCA 90 bp | ATTAGTGATGTCAGTACAGCTCCAGTACAGGAGGCAATCATTTGCTaGAGAGGAGTCACTGGGATTGTTGGTGGCGGCCCTTCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISDVSTAPVQEAIIC*RGVTGIVGGGPSVS Trigger: TGAAACTGAAGGGCCGCCACCAACAATCCCAGTGACTCCTCTTCAGCAAATGATTGCCTCCTGTACTGGAGCTGTACTGACATCACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 ENSMUST00000198792.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTCCTTTGGGGAATGGGTaGTTCTGGGCCTGGAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSPLGNG*FWAWSR Trigger: TCGACTCCAGGCCCAGAACAACCCATTCCCCAAAGG...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGTTCATTCGTCCACAGTaGCGTCTGTTTCTGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWFIRPQ*RLFLCF Trigger: AAAACACAGAAACAGACGCAACTGTGGACGAATGAA...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCTAAGCCTGACCACCTGAGTTCAAATCCCAAAGTCCACAAGGTGGAATGGAACCCAGAAAATCCTTaGTCAGCAACAATGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAKPDHLSSNPKVHKVEWNPENP*SATMFF Trigger: GAAGAACATTGTTGCTGACAAAGGATTTTCTGGGTT...CCATTCCACCTTGTGGACTTTGGGATTTGAACTCAGGTGGTCAGGCTTAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGTGTTTTTACTACATCAAATGGTAAAGTTGCAACAGCTGCAAAAGAACGAGGAGTCACTGGGATaGTTGGTGGCGGCCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSVFLLHQMVKLQQLQKNEESLG*LVAALQ Trigger: CTGAAGGGCCGCCACCAACAATCCCAGTGACTCCTC...GTTCTTTTGCAGCTGTTGCAACTTTACCATTTGATGTAGTAAAAACACAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAATTTAAATGTTTCTATGTGCCTGCGTTCTGTATGCTGTCACCTGAGTACAGGAGGCAATCATTaGCTGAAGAGGAGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGNLNVSMCLRSVCCHLSTGGNH*LKRSHW Trigger: CCAGTGACTCCTCTTCAGCAAATGATTGCCTCCTGT...ACTCAGGTGACAGCATACAGAACGCAGGCACATAGAAACATTTAAATTGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CAA 90 bp | ATACTTAAAATCTCATTCCTGAGCTCAGTGTGGGAAAGGGCACGTGCTGCTAAGTTCATTCGTCCACAGTaGCGTCTGTTTCTGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILKISFLSSVWERARAAKFIRPQ*RLFLCF Trigger: AAAACACAGAAACAGACGCAACTGTGGACGAATGAA...CTTAGCAGCACGTGCCCTTTCCCACACTGAGCTCAGGAATGAGATTTTAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACAACAGGAGGCAATCATTaGCTGAAGAGGAGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVTGVREHNVPELKTLTTGGNH*LKRSHW Trigger: CCAGTGACTCCTCTTCAGCAAATGATTGCCTCCTGT...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 |
||
| CDS-3UTR CAA 90 bp | ATGATTGAAATTTGCGTGGAACTGCACTTAGCTCTCTACACTGCAGTGCTTAGTGCTCCTGAAGTAAAGTaGATCATAAATGTTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MIEICVELHLALYTAVLSAPEVK*IINVGS Trigger: TGAACCAACATTTATGATCAACTTTACTTCAGGAGC...ACTAAGCACTGCAGTGTAGAGAGCTAAGTGCAGTTCCACGCAAATTTCAATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACACCGACTTTCAACATTTaGCTTCTGGAAGAACGACTT | + |
|
Preference number: 5 (lower is better) Translates to: KSVTGVREHNVPELKTLTPTFNI*LLEERL Trigger: AAGTCGTTCTTCCAGAAGCAAAATGTTGAAAGTCGG...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACACATCAAATGGTAAAGTaGCAACAGCTGCAAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSVTGVREHNVPELKTLTHQMVK*QQLQKN Trigger: GTTCTTTTGCAGCTGTTGCAACTTTACCATTTGATG...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTAACAGGAGTGAGGGAACACAATGTCCCTGAATTAAAGACGTTAACAGCTCCTGAAGTAAAGTaGATCATAAATGTTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KSVTGVREHNVPELKTLTAPEVK*IINVGS Trigger: TGAACCAACATTTATGATCAACTTTACTTCAGGAGC...TGTTAACGTCTTTAATTCAGGGACATTGTGTTCCCTCACTCCTGTTACTGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS-3UTR CAA 90 bp | AGCAACTTTCTTTGCAAGAGTACTAAGTGGCTGCAGTTTCTGGATTATGTTTTTCATCAAATGGTAAAGTaGCAACAGCTGCAAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNFLCKSTKWLQFLDYVFHQMVK*QQLQKN Trigger: GTTCTTTTGCAGCTGTTGCAACTTTACCATTTGATG...AAAAACATAATCCAGAAACTGCAGCCACTTAGTACTCTTGCAAAGAAAGTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 |
||
| CDS CCA 72 bp | AGTACAGGAGGCAATCATTTGCTGAAGAGGAGTCACTaGGATTGTTGGTGGCGGCCCTTCAGTTTCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: STGGNHLLKRSH*DCWWRPFSFRL Trigger: GAGCCTGAAACTGAAGGGCCGCCACCAACAATCCCAGTGACTCCTCTTCAGCAAATGATTGCCTCCTGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066921.10 ENSMUST00000170496.6 ENSMUST00000196727.5 ENSMUST00000198792.2 |
||
| CDS TCA 72 bp | TCTTGCTCTCCTCTTCACAGACACACATGTGATCCATaGGTCCATTACTTTGGGGAATGGGTTGTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSPLHRHTCDP*VHYFGEWVVLG Trigger: GCCCAGAACAACCCATTCCCCAAAGTAATGGACTCATGGATCACATGTGTGTCTGTGAAGAGGAGAGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||
| CDS CAA 72 bp | CATGTGATCCATGAGTCCATTACTTTGGGGAATGGGTaGTTCTGGGCCTGGAGTCGAATTTTAACAACATCC | + |
|
Preference number: 6 (lower is better) Translates to: HVIHESITLGNG*FWAWSRILTTS Trigger: GGATGTTGTTAAAATTCGACTCCAGGCCCAGAACAACCCATTCCCCAAAGTAATGGACTCATGGATCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196727.5 |
||