Pregenerated sensors for SLC25A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031633Ensembl transcript IDs: ENSMUST00000034049.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCAGGACAGGCATGCACACCGGAGTCGCTGACAAACGTTTCCTGAAAGAAAACATTAATGAGTCACACTaGGTTACTTTTCAGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: VRTGMHTGVADKRFLKENINESH*VTFQHQ Trigger: CTGATGCTGAAAAGTAACTCAGTGTGACTCATTAAT...GTTTTCTTTCAGGAAACGTTTGTCAGCGACTCCGGTGTGCATGCCTGTCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| 3UTR GCA 72 bp | AGACTGTGTGTAAGTCAGGGAACTATGGGAGCTCTGTaGATGTTACCACATGTGAGCCTTCAGCAAGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: RLCVSQGTMGAL*MLPHVSLQQAW Trigger: CCACGCTTGCTGAAGGCTCACATGTGGTAACATGCACAGAGCTCCCATAGTTCCCTGACTTACACACAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| 3UTR TCA 72 bp | CAGGCATGCACACCGGAGTCGCTGACAAACGTTTCCTaGAAGAAAACATGCACTGGTGCTTTTCAGTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: QACTPESLTNVS*KKTCTGAFQSV Trigger: AACAGACTGAAAAGCACCAGTGCATGTTTTCTTTCAGGAAACGTTTGTCAGCGACTCCGGTGTGCATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGATGACCCGCTTACGTTaGAGAAACTATAATGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: AQQSSGSQKTVCKSGNYGMTRLR*RNYNVV Trigger: GACCACATTATAGTTTCTCAAACGTAAGCGGGTCAT...CCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGAGCTCTGTGGGAGGTGGCCCCAGCTaGCCCACCAGAGGCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSGSQKTVCKSGNYGSSVGGGPS*PTRGQV Trigger: AACCTGGCCTCTGGTGGGGCAGCTGGGGCCACCTCC...CACAGAGCTCCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CCA 90 bp | GCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGCGCCAGAACTGCTTATaGCGATCCACGCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AQQSSGSQKTVCKSGNYGRQNCL*RSTPPR Trigger: CCTGGGAGGCGTGGATCGCCATAAGCAGTTCTGGCG...CCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR GCA 90 bp | GTCAGGACAGGCATGCACACCGGAGTCGCTGACAAACGTTTCCTGAAAGAAAACCCTTTCCGGCCAGACTaGATCATCATCCTACGACGA | + |
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Preference number: 4 (lower is better) Translates to: VRTGMHTGVADKRFLKENPFRPD*IIILRR Trigger: TCGTCGTAGGATGATGATGCAGTCTGGCCGGAAAGG...GTTTTCTTTCAGGAAACGTTTGTCAGCGACTCCGGTGTGCATGCCTGTCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR TCA 90 bp | TGCAACATTCTTACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACCTGGACAGAGACACTaGAACCCTGGTAGAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: CNILTPQRKLSKAQGPKRPGQRH*NPGRDP Trigger: AGGGTCTCTACCAGGGTTTCAGTGTCTCTGTCCAGG...TCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGTAAGAATGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGAGCTCTGTGCAGCTCACGATAATGTaGACATTCTTGGGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSGSQKTVCKSGNYGSSVQLTIM*TFLGSG Trigger: GCCAGACCCCAAGAATGTGCACATTATCGTGAGCTG...CACAGAGCTCCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CCA 90 bp | TGCAACATTCTTACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGAAGTACCGGATCACGTTaGCCAGGTTACCCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CNILTPQRKLSKAQGPKRSTGSR*PGYPSR Trigger: TCTGGAGGGGTAACCTGGCCAACGTGATCCGGTACT...TCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGTAAGAATGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTACCGCTGTCACACTCTaGGCAATCATCCAGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: ILTPQRKLSKAQGPKRLCTAVTL*AIIQLT Trigger: CGTGAGCTGGATGATTGCCCAGAGTGTGACAGCGGT...ACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGTAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTGAAAGCCCTGCTCCTTaGGGATTCTCACGACACAAT | + |
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Preference number: 4 (lower is better) Translates to: TPQRKLSKAQGPKRLCVSESPAP*GFSRHN Trigger: ATTGTGTCGTGAGAATCCCCAAGGAGCAGGGCTTTC...ACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTAAAGAGAGAAAGCCCTaGTCCTTGGGGATTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: ILTPQRKLSKAQGPKRLCKERKP*SLGILT Trigger: CGTGAGAATCCCCAAGGAGCAGGGCTTTCTCTCTTT...ACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGTAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR TCA 90 bp | CAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGAGCTCTGTGCATGTCACGACACAATCAATaGTGCCTTTGTACTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QGPKRLCVSQGTMGALCMSRHNQ*CLCTAS Trigger: AGAAGCAGTACAAAGGCATCATTGATTGTGTCGTGA...CATGCACAGAGCTCCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR TCA 90 bp | TTCCTAAGCATGCAACATTCTTACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGGCTTGTACTTGTCTTTaGAGGCGAAGTTCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLSMQHSYSSAKAQQSSGACTCL*RRSSGL Trigger: AAGCCCTGAACTTCGCCTTCAAAGACAAGTACAAGC...CCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGTAAGAATGTTGCATGCTTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS CCA 90 bp | TTGAAGATCTTGGTGAGACAGTCGCCCAGCCCATTGAATTCTCGCTaGGAAGATCCCTTGCCCACGTCGGCAGCCAGCCTGGTCCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: LKILVRQSPSPLNSR*EDPLPTSAASLVLA Trigger: TGCTAGGACCAGGCTGGCTGCCGACGTGGGCAAGGGATCTTCCCAGCGAGAATTCAATGGGCTGGGCGACTGTCTCACCAAGATCTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | GCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGAGCTCTGTGCAAGTACCGGATCACGTaGGCCAGGTTACCCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: AQGPKRLCVSQGTMGALCKYRIT*ARLPLQ Trigger: CTGGAGGGGTAACCTGGCCAACGTGATCCGGTACTT...GCACAGAGCTCCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | CAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGACAGTCGCCCAGCCCATaGAATTCTCGCTGGGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QRKLSKAQGPKRLCVSQGQSPSP*NSRWED Trigger: ATCTTCCCAGCGAGAATTCAATGGGCTGGGCGACTG...TCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | CAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAATAATGTGCACATTCTaGGGGTCTGGCAGCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: QRKLSKAQGPKRLCVSQGIMCTF*GSGSIP Trigger: GGGGATGCTGCCAGACCCCAAGAATGTGCACATTAT...TCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | ACAGGCATGCACACCGGAGTCGCTGACAAACGTTTCCTGAAAGAAAACATGCACAGAAAGCCCTGCTCCTaGGGGATTCTCACGACACAA | + |
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Preference number: 5 (lower is better) Translates to: TGMHTGVADKRFLKENMHRKPCS*GILTTQ Trigger: TTGTGTCGTGAGAATCCCCAAGGAGCAGGGCTTTCT...GTGCATGTTTTCTTTCAGGAAACGTTTGTCAGCGACTCCGGTGTGCATGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | CAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAATGCCTCTCAGTACATaGGACCAAGCACCTTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QRKLSKAQGPKRLCVSQGMPLST*DQAPLK Trigger: CTTCAAAGGTGCTTGGTCCAATGTACTGAGAGGCAT...TCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | GCTCAGCAAAGCTCAGGGTCCCAAAAGACTGTGTGTAAGTCAGGGAACTATGGGCCTTTGAAGAAAGCGTaGGCTCCTTCATCTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: AQQSSGSQKTVCKSGNYGPLKKA*APSSFA Trigger: TGCAAAAGATGAAGGAGCCAACGCTTTCTTCAAAGG...CCCATAGTTCCCTGACTTACACACAGTCTTTTGGGACCCTGAGCTTTGCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | TGCAACATTCTTACTCCTCAGCGAAAGCTCAGCAAAGCTCAGGGTCCCAAAAGACAATCAATGATGCCTTaGTACTGCTTCTCTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: CNILTPQRKLSKAQGPKRQSMMP*YCFSAL Trigger: CAGTGCAGAGAAGCAGTACAAAGGCATCATTGATTG...TCTTTTGGGACCCTGAGCTTTGCTGAGCTTTCGCTGAGGAGTAAGAATGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS-3UTR CAA 90 bp | AGCATCAGTTCTTCAGTTAATCAGGTGAACAAGTATGATAAGCTAGCCTGTTTTTCCGACTTGAAGATCTaGGTGAGACAGTCGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SISSSVNQVNKYDKLACFSDLKI*VRQSPS Trigger: GCTGGGCGACTGTCTCACCAAGATCTTCAAGTCGGA...AAAACAGGCTAGCTTATCATACTTGTTCACCTGATTAACTGAAGAACTGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS CAA 90 bp | GTGAGACAGTCGCCCAGCCCATTGAATTCTCGCTGGGAAGATCCCTaGCCCACGTCGGCAGCCAGCCTGGTCCTAGCAAAGTCCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VRQSPSPLNSRWEDP*PTSAASLVLAKSSG Trigger: CCCGCTGGACTTTGCTAGGACCAGGCTGGCTGCCGACGTGGGCAAGGGATCTTCCCAGCGAGAATTCAATGGGCTGGGCGACTGTCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS CCA 72 bp | TTGGTGAGACAGTCGCCCAGCCCATTGAATTCTCGCTaGGAAGATCCCTTGCCCACGTCGGCAGCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LVRQSPSPLNSR*EDPLPTSAASL Trigger: CAGGCTGGCTGCCGACGTGGGCAAGGGATCTTCCCAGCGAGAATTCAATGGGCTGGGCGACTGTCTCACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS CAA 72 bp | TCGCCCAGCCCATTGAATTCTCGCTGGGAAGATCCCTaGCCCACGTCGGCAGCCAGCCTGGTCCTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SPSPLNSRWEDP*PTSAASLVLAK Trigger: CTTTGCTAGGACCAGGCTGGCTGCCGACGTGGGCAAGGGATCTTCCCAGCGAGAATTCAATGGGCTGGGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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| CDS CAA 72 bp | GACTTGAAGATCTTGGTGAGACAGTCGCCCAGCCCATaGAATTCTCGCTGGGAAGATCCCTTGCCCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: DLKILVRQSPSP*NSRWEDPLPTS Trigger: CGACGTGGGCAAGGGATCTTCCCAGCGAGAATTCAATGGGCTGGGCGACTGTCTCACCAAGATCTTCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034049.5 |
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