Pregenerated sensors for SLC25A39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018677Ensembl transcript IDs: ENSMUST00000018821.9, ENSMUST00000107098.8, ENSMUST00000124755.2, ENSMUST00000128825.2, ENSMUST00000130436.8, ENSMUST00000134669.8, ENSMUST00000142097.8, ENSMUST00000149777.8, ENSMUST00000154001.8, ENSMUST00000155104.8
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACATGCTGAGCCTGCAGCTTGGTCCGCACGAGCTCCAAGGGGCTaGCAACTGTCACGGTGCCCATTCGGGCGAGGGCACCAGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: THAEPAAWSARAPRG*QLSRCPFGRGHQPP Trigger: TGGTGGCTGGTGCCCTCGCCCGAATGGGCACCGTGACAGTTGTCAGCCCCTTGGAGCTCGTGCGGACCAAGCTGCAGGCTCAGCATGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134669.8 ENSMUST00000142097.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTCCACCGCTCCCAGTGACATCTGTCGCTGTGTCTTCACCACATCGAAGGGCTGAGCCTGCAGCTTaGTCCGCACGAGCTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QPPPLPVTSVAVSSPHRRAEPAA*SARAPR Trigger: CCTTGGAGCTCGTGCGGACCAAGCTGCAGGCTCAGC...CCTTCGATGTGGTGAAGACACAGCGACAGATGTCACTGGGAGCGGTGGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR-3UTR TCA 90 bp | ACCATTCCTGAGATGCCACCGGCCACGAAGCTGATGCCCACCGATGTCTGGTCTCGGTATGACACATGCTaGGCCTGCAGCTTGGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: TIPEMPPATKLMPTDVWSRYDTC*ACSLVR Trigger: GCGGACCAAGCTGCAGGCTCAGCATGTGTCATACCG...AGACCAGACATCGGTGGGCATCAGCTTCGTGGCCGGTGGCATCTCAGGAATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR-3UTR TCA 90 bp | TTCACCACATCGAAGGGTAGGGTAAGGGTGGCAGCCACCATTCCTGAGATGCCACGAGCTCCAAGGGGCTaGCAACTGTCACGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FTTSKGRVRVAATIPEMPRAPRG*QLSRCP Trigger: TGGGCACCGTGACAGTTGTCAGCCCCTTGGAGCTCG...TGGCATCTCAGGAATGGTGGCTGCCACCCTTACCCTACCCTTCGATGTGGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCCACCGCTCCCAGTGACATCTGTCGCTGTGTCTTCACCACATCGAAGGAGCCAGCTCACGGTATaGCACATGCTGAGCCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QPPPLPVTSVAVSSPHRRSQLTV*HMLSLQ Trigger: CTGCAGGCTCAGCATGTGTCATACCGTGAGCTGGCT...CCTTCGATGTGGTGAAGACACAGCGACAGATGTCACTGGGAGCGGTGGAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAGGTCTGAGGACAGCCTaGGTGACTGGACTGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DLVLNSGGGRGAILGRETGLRTA*VTGLGG Trigger: CCCTCCCAGTCCAGTCACCCAGGCTGTCCTCAGACC...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGATGCCCACCGATGTCTGGTCTTTTGGTCTCAGTCCGCTCAGCCAGCTCTTCATCTCGAAGAGCTGTaGGACCCCAGCCCAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: ADAHRCLVFWSQSAQPALHLEEL*DPSPAT Trigger: TGTGGCTGGGCTGGGGTCCCACAGCTCTTCGAGATG...AAGAGCTGGCTGAGCGGACTGAGACCAAAAGACCAGACATCGGTGGGCATCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAGGGAGGGAAGGCACTTaGCTCAGTCTCCTGATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: DLVLNSGGGRGAILGRETGREGT*LSLLIP Trigger: TGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCC...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| 3UTR-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAGGAGAGGGGCAATCCTaGGAAGGGAAACAGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRGEGQS*EGKQQE Trigger: TTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTCC...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| 3UTR TCA 72 bp | GAGCCTGCAGCTTGGTCCGCACGAGCTCCAAGGGGCTaGCAACTGTCACGGTGCCCATTCGGGCGAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EPAAWSARAPRG*QLSRCPFGRGH Trigger: GTGCCCTCGCCCGAATGGGCACCGTGACAGTTGTCAGCCCCTTGGAGCTCGTGCGGACCAAGCTGCAGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134669.8 ENSMUST00000142097.8 |
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| 3UTR TCA 72 bp | ACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTaGTCCCACCCGTGCAAGAGCCGGTTGCTCCCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: TGLGGKALGSVS*SHPCKSRLLPD Trigger: GTCGGGGAGCAACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| 3UTR CCA 72 bp | CAGCAGGAATCCAGGTCTGAGGACAGCCTGGGTGACTaGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QQESRSEDSLGD*TGREGTWLSLL Trigger: CAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTCACCCAGGCTGTCCTCAGACCTGGATTCCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| 3UTR CCA 72 bp | ATGCCACCGGCCACGAAGCTGATGCCCACCGATGTCTaGTCTTTTGGTCTCAGTCCGCTCAGCCAGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: MPPATKLMPTDV*SFGLSPLSQLF Trigger: GAAGAGCTGGCTGAGCGGACTGAGACCAAAAGACCAGACATCGGTGGGCATCAGCTTCGTGGCCGGTGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR TCA 72 bp | CAGCCACCATTCCTGAGATGCCACCGGCCACGAAGCTaGTGCCCACCGATGTCTGGTCTTTTGGTCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: QPPFLRCHRPRS*CPPMSGLLVSV Trigger: GACTGAGACCAAAAGACCAGACATCGGTGGGCATCAGCTTCGTGGCCGGTGGCATCTCAGGAATGGTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR CCA 72 bp | GGCCACGAAGCTGATGCCCACCGATGTCTGGTCTTTTaGTCTCAGTCCGCTCAGCCAGCTCTTCACCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GHEADAHRCLVF*SQSAQPALHQL Trigger: GAGTTGGTGAAGAGCTGGCTGAGCGGACTGAGACCAAAAGACCAGACATCGGTGGGCATCAGCTTCGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| 3UTR TCA 72 bp | GCTGTGCACAGAAGACCATCATCTTTAGACAAGGAATaGATGGGGCCAAGATACTGCCTGGCCCAAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: AVHRRPSSLDKE*MGPRYCLAQAP Trigger: AGGAGCTTGGGCCAGGCAGTATCTTGGCCCCATTCATTCCTTGTCTAAAGATGATGGTCTTCTGTGCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTGGGCACCAGCCACCATaGGTGCGTAGAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGGHQPP*VRRGQR Trigger: CCTCTGACCTCTACGCACCCATGGTGGCTGGTGCCC...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAACGAGCTCCAAGGGGCTaGCAACTGTCACGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQRAPRG*QLSRCP Trigger: TGGGCACCGTGACAGTTGTCAGCCCCTTGGAGCTCG...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GTCCGCACGAGCTCCAAGGGGCTGACAACTGTCACGGTGCCCATTCGGGCGAGGGGTCCTGAAACCAGGTaGCACAGCGGGTACCATTTG | + |
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Preference number: 4 (lower is better) Translates to: VRTSSKGLTTVTVPIRARGPETR*HSGYHL Trigger: CAAATGGTACCCGCTGTGCCACCTGGTTTCAGGACC...CCTCGCCCGAATGGGCACCGTGACAGTTGTCAGCCCCTTGGAGCTCGTGCGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134669.8 ENSMUST00000142097.8 |
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| CDS-3UTR TCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTCATCCAAGGTGCCAGTaGACCGTGTGGGGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGHPRCQ*TVWGPE Trigger: TTCAGGACCCCACACGGTTCACTGGCACCTTGGATG...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTCTCCACCGCTCCCAGTaGCATCTGTCGCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGLHRSQ*HLSLCL Trigger: AAGACACAGCGACAGATGTCACTGGGAGCGGTGGAG...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR TCA 90 bp | CACATGCTGAGCCTGCAGCTTGGTCCGCACGAGCTCCAAGGGGCTGACAACTGTCACCCAAGGTGCCAGTaGACCGTGTGGGGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMLSLQLGPHELQGADNCHPRCQ*TVWGPE Trigger: TTCAGGACCCCACACGGTTCACTGGCACCTTGGGTG...ACAGTTGTCAGCCCCTTGGAGCTCGTGCGGACCAAGCTGCAGGCTCAGCATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134669.8 ENSMUST00000142097.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCGGGCACCAGCCACCATaGGTGCGTAGAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGNPGKGNSRNPGLRTAGHQPP*VRRGQR Trigger: CCTCTGACCTCTACGCACCCATGGTGGCTGGTGCCC...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAACATCTCGAAGAGCTGTaGGACCCCAGCCCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQHLEEL*DPSPAT Trigger: TGTGGCTGGGCTGGGGTCCCACAGCTCTTCGAGATG...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTAGGTGGAGTCCACTCTaGGCGGCTTCACTCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGRWSPL*AASLSQ Trigger: CTGTGAGAGTGAAGCCGCCCAGAGTGGACTCCACCT...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | ACAGCCTCCACCGCTCCCAGTGACATCTGTCGCTGTGTCTTCACCACATCGAAGCACAGCCCCGGCTCCTaGGGCCACCATTTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TASTAPSDICRCVFTTSKHSPGS*GHHLLK Trigger: CTTCAGCAAATGGTGGCCTCAGGAGCCGGGGCTGTG...CTTCGATGTGGTGAAGACACAGCGACAGATGTCACTGGGAGCGGTGGAGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCCGGTATGACACATGCTaGGCCTGCAGCTTGGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: ERGNPGKGNSRNPGLRTARYDTC*ACSLVR Trigger: GCGGACCAAGCTGCAGGCTCAGCATGTGTCATACCG...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAAGCCAGCTCACGGTATaGCACATGCTGAGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQSQLTV*HMLSLQ Trigger: CTGCAGGCTCAGCATGTGTCATACCGTGAGCTGGCT...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTGAGGCTGCTCCTGGTTaGGCCTCTGGAAGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGEAAPG*ASGRSF Trigger: AAAGCTTCTTCCAGAGGCTCAACCAGGAGCAGCCTC...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR GCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTACCAGCCACCATGGGTaGGTAGAGGTCAGAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGTSHHG*VEVRGQ Trigger: TTGACCTCTGACCTCTACGCACCCATGGTGGCTGGT...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GCCACCATTCCTGAGATGCCACCGGCCACGAAGCTGATGCCCACCGATGTCTGGGGTCCTGAAACCAGGTaGCACAGCGGGTACCATTTG | + |
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Preference number: 4 (lower is better) Translates to: ATIPEMPPATKLMPTDVWGPETR*HSGYHL Trigger: CAAATGGTACCCGCTGTGCCACCTGGTTTCAGGACC...CCAGACATCGGTGGGCATCAGCTTCGTGGCCGGTGGCATCTCAGGAATGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| CDS-3UTR CCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAACTGCAAAGAGTCCCCTaGTGCCAGATTCAGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQLQRVP*CQIQPG Trigger: TCCGGGCTGAATCTGGCACCAGGGGACTCTTTGCAG...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | CTTGAACAGAGGAAGCCAGCTCACGGTATGACACATGCTGAGCCTGCAGCTTGGCACAGCCCCGGCTCCTaGGGCCACCATTTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LEQRKPAHGMTHAEPAAWHSPGS*GHHLLK Trigger: CTTCAGCAAATGGTGGCCTCAGGAGCCGGGGCTGTG...CCAAGCTGCAGGCTCAGCATGTGTCATACCGTGAGCTGGCTTCCTCTGTTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134669.8 ENSMUST00000142097.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCCATCCAAGGTGCCAGTaGACCGTGTGGGGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ERGNPGKGNSRNPGLRTAHPRCQ*TVWGPE Trigger: TTCAGGACCCCACACGGTTCACTGGCACCTTGGATG...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACACGAGCTCCAAGGGGCTaGCAACTGTCACGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETRAPRG*QLSRCP Trigger: TGGGCACCGTGACAGTTGTCAGCCCCTTGGAGCTCG...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCCTCCACCGCTCCCAGTaGCATCTGTCGCTGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ERGNPGKGNSRNPGLRTALHRSQ*HLSLCL Trigger: AAGACACAGCGACAGATGTCACTGGGAGCGGTGGAG...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR TCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGGCTGCTCCTGGTTaGGCCTCTGGAAGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQEAAPG*ASGRSF Trigger: AAAGCTTCTTCCAGAGGCTCAACCAGGAGCAGCCTC...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR TCA 90 bp | ACAGCCTCCACCGCTCCCAGTGACATCTGTCGCTGTGTCTTCACCACATCGAAGCACCCAAGGTGCCAGTaGACCGTGTGGGGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TASTAPSDICRCVFTTSKHPRCQ*TVWGPE Trigger: TTCAGGACCCCACACGGTTCACTGGCACCTTGGGTG...CTTCGATGTGGTGAAGACACAGCGACAGATGTCACTGGGAGCGGTGGAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| CDS-3UTR GCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAACAAAGAGTCCCCTGGTaGCAGATTCAGCCCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQQRVPW*QIQPGF Trigger: GAATCCGGGCTGAATCTGGCACCAGGGGACTCTTTG...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR GCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACACCTGGGGAGGAAGCCTaGAAAGAGTCCCCTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETPGEEA*KESPGA Trigger: GGCACCAGGGGACTCTTTGCAGGCTTCCTCCCCAGG...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTGTAGATAGCAGTAGCTaGCACGGTCATCACCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGVDSSS*HGHHQG Trigger: ACCCTGGTGATGACCGTGCCAGCTACTGCTATCTAC...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAGCTGAGCCTGCAGCTTaGTCCGCACGAGCTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETAEPAA*SARAPR Trigger: CCTTGGAGCTCGTGCGGACCAAGCTGCAGGCTCAGC...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCCTGCAAAGAGTCCCCTaGTGCCAGATTCAGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: ERGNPGKGNSRNPGLRTALQRVP*CQIQPG Trigger: TCCGGGCTGAATCTGGCACCAGGGGACTCTTTGCAG...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR GCA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCCAAAGAGTCCCCTGGTaGCAGATTCAGCCCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: ERGNPGKGNSRNPGLRTAQRVPW*QIQPGF Trigger: GAATCCGGGCTGAATCTGGCACCAGGGGACTCTTTG...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGACGGTCATCACCAGGGTaGCTGGGAGGCCGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRRSSPG*LGGRST Trigger: TGTGGAGCGGCCTCCCAGCCACCCTGGTGATGACCG...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGAGCCGGTTCCTGGTTGAGCCTCTaGAAGAAGCTTTTGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WEGRHLAQSPDPTRARAGSWLSL*KKLLPN Trigger: GTTTGGCAAAAGCTTCTTCCAGAGGCTCAACCAGGA...ACCGGCTCTTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR TCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGACACAGCCCCGGCTCCTaGGGCCACCATTTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRHSPGS*GHHLLK Trigger: CTTCAGCAAATGGTGGCCTCAGGAGCCGGGGCTGTG...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR TCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAGAGGCTGCTCCTGGTTaGGCCTCTGGAAGAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETEAAPG*ASGRSF Trigger: AAAGCTTCTTCCAGAGGCTCAACCAGGAGCAGCCTC...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR GCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAACCAGCCACCATGGGTaGGTAGAGGTCAGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETTSHHG*VEVRGQ Trigger: TTGACCTCTGACCTCTACGCACCCATGGTGGCTGGT...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAGGTCCTGAAACCAGGTaGCACAGCGGGTACCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETGPETR*HSGYHL Trigger: CAAATGGTACCCGCTGTGCCACCTGGTTTCAGGACC...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAGCTGAGCCTGCAGCTTaGTCCGCACGAGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRAEPAA*SARAPR Trigger: CCTTGGAGCTCGTGCGGACCAAGCTGCAGGCTCAGC...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAGAAGCAGGAGCCAGGTaGAGTCCACTCTGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFREAGAR*SPLWAA Trigger: AGCCGCCCAGAGTGGACTCCACCTGGCTCCTGCTTC...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAATCCTGGTTGAGCCTCTaGAAGAAGCTTTTGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DWTGREGTWLSLLIPPVQSWLSL*KKLLPN Trigger: GTTTGGCAAAAGCTTCTTCCAGAGGCTCAACCAGGA...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR TCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGACGGTATGACACATGCTaGGCCTGCAGCTTGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRRYDTC*ACSLVR Trigger: GCGGACCAAGCTGCAGGCTCAGCATGTGTCATACCG...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAGTAGATAGCAGTAGCTaGCACGGTCATCACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETVDSSS*HGHHQG Trigger: ACCCTGGTGATGACCGTGCCAGCTACTGCTATCTAC...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACAATGCCCACCGATGTCTaGTCTTTTGGTCTCAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETMPTDV*SFGLSP Trigger: CGGACTGAGACCAAAAGACCAGACATCGGTGGGCAT...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR TCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGACTCCACCGCTCCCAGTaGCATCTGTCGCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRLHRSQ*HLSLCL Trigger: AAGACACAGCGACAGATGTCACTGGGAGCGGTGGAG...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAAGGTGGAGTCCACTCTaGGCGGCTTCACTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRRWSPL*AASLSQ Trigger: CTGTGAGAGTGAAGCCGCCCAGAGTGGACTCCACCT...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAGGTCCTGAAACCAGGTaGCACAGCGGGTACCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRGPETR*HSGYHL Trigger: CAAATGGTACCCGCTGTGCCACCTGGTTTCAGGACC...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CCA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACATCCTGGTTGAGCCTCTaGAAGAAGCTTTTGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLVLNSGGGRGAILGRETSWLSL*KKLLPN Trigger: GTTTGGCAAAAGCTTCTTCCAGAGGCTCAACCAGGA...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CCA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAATGCCCACCGATGTCTaGTCTTTTGGTCTCAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRMPTDV*SFGLSP Trigger: CGGACTGAGACCAAAAGACCAGACATCGGTGGGCAT...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CAA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAGGCTCCAGGACTCCATaGCAGTATAGGAGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DWTGREGTWLSLLIPPVQGSRTP*QYRRHF Trigger: GAAGTGCCTCCTATACTGCAATGGAGTCCTGGAGCC...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS-3UTR CAA 90 bp | GACTGGACTGGGAGGGAAGGCACTTGGCTCAGTCTCCTGATCCCACCCGTGCAAAGAGGCTGCTCCTGGTaGAGCCTCTGGAAGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DWTGREGTWLSLLIPPVQRGCSW*SLWKKL Trigger: AAGCTTCTTCCAGAGGCTCAACCAGGAGCAGCCTCT...TTGCACGGGTGGGATCAGGAGACTGAGCCAAGTGCCTTCCCTCCCAGTCCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CAA 90 bp | GATTTGGTCTTGAATTCGGGAGGCGGGAGAGGGGCAATCCTGGGAAGGGAAACACAGGAGGGTGCAGCCTaGATGATCCTGGGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLVLNSGGGRGAILGRETQEGAA*MILGRK Trigger: CTTCCTCCCCAGGATCATCAAGGCTGCACCCTCCTG...TGTTTCCCTTCCCAGGATTGCCCCTCTCCCGCCTCCCGAATTCAAGACCAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGGGCAATCCTGGGAAGGGAAACAGCAGGAATCCAGGTCTGAGGACAGCCAGAGGCTGCTCCTGGTaGAGCCTCTGGAAGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERGNPGKGNSRNPGLRTARGCSW*SLWKKL Trigger: AAGCTTCTTCCAGAGGCTCAACCAGGAGCAGCCTCT...GGCTGTCCTCAGACCTGGATTCCTGCTGTTTCCCTTCCCAGGATTGCCCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000128825.2 |
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| CDS-3UTR CAA 90 bp | GCTGATGCCCACCGATGTCTGGTCTTTTGGTCTCAGTCCGCTCAGCCAGCTCTTGGCTCCAGGACTCCATaGCAGTATAGGAGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADAHRCLVFWSQSAQPALGSRTP*QYRRHF Trigger: GAAGTGCCTCCTATACTGCAATGGAGTCCTGGAGCC...AAGAGCTGGCTGAGCGGACTGAGACCAAAAGACCAGACATCGGTGGGCATCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134669.8 |
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| CDS-3UTR CAA 90 bp | CTTGAACAGAGGAAGCCAGCTCACGGTATGACACATGCTGAGCCTGCAGCTTGGGGCTCCAGGACTCCATaGCAGTATAGGAGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEQRKPAHGMTHAEPAAWGSRTP*QYRRHF Trigger: GAAGTGCCTCCTATACTGCAATGGAGTCCTGGAGCC...CCAAGCTGCAGGCTCAGCATGTGTCATACCGTGAGCTGGCTTCCTCTGTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134669.8 ENSMUST00000142097.8 |
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| CDS CCA 90 bp | TGGTGTAGGAGAGACTCCAGAATCTGGAGGGAGTTGTCAATTCGCTaGTTGCCGAGGGTCTCTGAGACTGAAGGCGGACCTTCACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: WCRRDSRIWRELSIR*LPRVSETEGGPSPH Trigger: ATGTGGTGAAGGTCCGCCTTCAGTCTCAGAGACCCTCGGCAACCAGCGAATTGACAACTCCCTCCAGATTCTGGAGTCTCTCCTACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000124755.2 ENSMUST00000130436.8 ENSMUST00000134669.8 ENSMUST00000142097.8 ENSMUST00000149777.8 ENSMUST00000154001.8 ENSMUST00000155104.8 |
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| CDS-3UTR CAA 90 bp | CGTACCCCAAGACACTACAGCCACAGCTGTGCACAGAAGACCATCATCTTTAGAGGCTCCAGGACTCCATaGCAGTATAGGAGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTPRHYSHSCAQKTIIFRGSRTP*QYRRHF Trigger: GAAGTGCCTCCTATACTGCAATGGAGTCCTGGAGCC...TCTAAAGATGATGGTCTTCTGTGCACAGCTGTGGCTGTAGTGTCTTGGGGTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS CCA 72 bp | GGATTCTGCGAAGCAGGAGCCAGGTGGAGTCCACTCTaGGCGGCTTCACTCTCACAGCCTCCACCGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GFCEAGARWSPL*AASLSQPPPLP Trigger: TGGGAGCGGTGGAGGCTGTGAGAGTGAAGCCGCCCAGAGTGGACTCCACCTGGCTCCTGCTTCGCAGAATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS TCA 72 bp | GGGGAGGAAGCCTCTCACAGCCTCCACCGCTCCCAGTaGCATCTGTCGCTGTGTCTTCACCACATCGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GEEASHSLHRSQ*HLSLCLHHIEG Trigger: CCCTTCGATGTGGTGAAGACACAGCGACAGATGTCACTGGGAGCGGTGGAGGCTGTGAGAGGCTTCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128825.2 |
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| CDS CCA 72 bp | CAGATTCAGCCCGGATTCTGCGAAGCAGGAGCCAGGTaGAGTCCACTCTGGGCGGCTTCACTCTCACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QIQPGFCEAGAR*SPLWAASLSQP Trigger: AGGCTGTGAGAGTGAAGCCGCCCAGAGTGGACTCCACCTGGCTCCTGCTTCGCAGAATCCGGGCTGAATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 |
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| CDS GCA 72 bp | ACTCCAGAATCTGGAGGGAGTTGTCAATTCGCTGGTTaGCGAGGGTCTCTGAGACTGAAGGCGGACCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TPESGGSCQFAG*RGSLRLKADLH Trigger: GTGAAGGTCCGCCTTCAGTCTCAGAGACCCTCGGCAACCAGCGAATTGACAACTCCCTCCAGATTCTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000124755.2 ENSMUST00000130436.8 ENSMUST00000134669.8 ENSMUST00000142097.8 ENSMUST00000149777.8 ENSMUST00000154001.8 ENSMUST00000155104.8 |
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| CDS CCA 72 bp | AGAGACTCCAGAATCTGGAGGGAGTTGTCAATTCGCTaGTTGCCGAGGGTCTCTGAGACTGAAGGCGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RDSRIWRELSIR*LPRVSETEGGP Trigger: AGGTCCGCCTTCAGTCTCAGAGACCCTCGGCAACCAGCGAATTGACAACTCCCTCCAGATTCTGGAGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000018821.9 ENSMUST00000107098.8 ENSMUST00000124755.2 ENSMUST00000130436.8 ENSMUST00000134669.8 ENSMUST00000142097.8 ENSMUST00000149777.8 ENSMUST00000154001.8 ENSMUST00000155104.8 |
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| CDS CCA 72 bp | GGCACTTCCCTGGGGACTGTAGAGCGGAGGATGATTTaGTGTAGGAGAGACTCCAGAATCTGGAGGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTSLGTVERRMI*CRRDSRIWREL Trigger: CAACTCCCTCCAGATTCTGGAGTCTCTCCTACACCAAATCATCCTCCGCTCTACAGTCCCCAGGGAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000018821.9 ENSMUST00000124755.2 ENSMUST00000130436.8 ENSMUST00000134669.8 ENSMUST00000149777.8 ENSMUST00000154001.8 ENSMUST00000155104.8 |
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| CDS CCA 72 bp | GGCACTTCCATTTGGTGTAGGAGAGACTCCAGAATCTaGAGGGAGTTGTCAATTCGCTGGTTGCCGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSIWCRRDSRI*RELSIRWLPRV Trigger: GACCCTCGGCAACCAGCGAATTGACAACTCCCTCCAGATTCTGGAGTCTCTCCTACACCAAATGGAAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107098.8 ENSMUST00000142097.8 |
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| CDS CCA 72 bp | CCAGGACTCCATTGCAGTATAGGAGGCACTTCCATTTaGTGTAGGAGAGACTCCAGAATCTGGAGGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGLHCSIGGTSI*CRRDSRIWREL Trigger: CAACTCCCTCCAGATTCTGGAGTCTCTCCTACACCAAATGGAAGTGCCTCCTATACTGCAATGGAGTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107098.8 ENSMUST00000142097.8 |
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