Pregenerated sensors for SLC25A38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032519Ensembl transcript IDs: ENSMUST00000035106.12, ENSMUST00000135514.2, ENSMUST00000144768.8, ENSMUST00000150093.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCCCCGCGGCACTGACGGGAAGTGTGCACAGAGCGGTAGGTACTaGCAACTCCATGCCTATGGCTCCAGCCACCCAGCCACTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QPRGTDGKCAQSGRY*QLHAYGSSHPATLS Trigger: AGAGAGAGTGGCTGGGTGGCTGGAGCCATAGGCATGGAGTTGCCAGTACCTACCGCTCTGTGCACACTTCCCGTCAGTGCCGCGGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR GCA 90 bp | TCTAAGGCGCCCTGTAGAGTAGGCAGGTGGCTGAAGCAGCGACCTTaGAGAGGCCTCCTCTCAAGTAGCCTTGTGGGCAGCCAAGCTCGA | + |
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Preference number: 1 (lower is better) Translates to: SKAPCRVGRWLKQRP*RGLLSSSLVGSQAR Trigger: TCGAGCTTGGCTGCCCACAAGGCTACTTGAGAGGAGGCCTCTGCAAGGTCGCTGCTTCAGCCACCTGCCTACTCTACAGGGCGCCTTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR GCA 90 bp | TTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGCACGGTGGCCCTCGCTaGAGTAGATGCTCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LIRGIRAASSWAVPCSTAHGGPR*SRCSSG Trigger: CCCTGAGGAGCATCTACTGCAGCGAGGGCCACCGTG...CGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| 3UTR-3UTR TCA 90 bp | TTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGCATCAGGTAGAGCCCTaGGAAGGGGGCATCACGGAG | + |
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Preference number: 2 (lower is better) Translates to: LIRGIRAASSWAVPCSTAHQVEP*EGGITE Trigger: CTCCGTGATGCCCCCTTCTCAGGGCTCTACCTGATG...CGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTCCACCATATGGGTCCTGGGAGCCAACGCAGGCCTCTGTTAAGCACCTTGCAACTCCATGCCTATaGCTCCAGCCACCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SPPPYGSWEPTQASVKHLATPCL*LQPPSH Trigger: GTGGCTGGGTGGCTGGAGCCATAGGCATGGAGTTGC...AAGGTGCTTAACAGAGGCCTGCGTTGGCTCCCAGGACCCATATGGTGGAGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR CCA 90 bp | CGTGTCTTGATCACTGTGATGGGTGACATGCAGACTCCTGCCACAGAGCGGGAGCTCACAATGGACCTCTaGGATCTCCCTGCTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RVLITVMGDMQTPATERELTMDL*DLPAEG Trigger: TCCCTCAGCAGGGAGATCCCAGAGGTCCATTGTGAG...CTCCCGCTCTGTGGCAGGAGTCTGCATGTCACCCATCACAGTGATCAAGACACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTCCACCATATGGGTCCTGGGAGCCAACGCAGGCCTCTGTTAAGCACCTTTCTCAAGTAGCCTTGTaGGCAGCCAAGCTCGATCCA | + |
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Preference number: 2 (lower is better) Translates to: SPPPYGSWEPTQASVKHLSQVAL*AAKLDP Trigger: TGGATCGAGCTTGGCTGCCCACAAGGCTACTTGAGA...AAGGTGCTTAACAGAGGCCTGCGTTGGCTCCCAGGACCCATATGGTGGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR GCA 90 bp | GAAATTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACATCACGGAGGAGAGTTaGTGTCAGGCCCCTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: EINKGYQSSIQLGCAVQHITEES*CQAPEE Trigger: CTCTTCAGGGGCCTGACAGCAACTCTCCTCCGTGAT...GTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGGCAGGAGGCCCACACCTTCTCTACTGGGGGATTCCTTCATTACCAATATGACGGCACTTGTGCCTaGCTCTTCAGACAGCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TWQEAHTFSTGGFLHYQYDGTCA*LFRQRS Trigger: ACTGCGCTGTCTGAAGAGCCAGGCACAAGTGCCGTC...ATATTGGTAATGAAGGAATCCCCCAGTAGAGAAGGTGTGGGCCTCCTGCCATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR TCA 90 bp | TCGTTCTCGGGGCCTACAGGAGGCAGCCTAGGAACAAAACTAATGCCTATCTTGGGGTCTGGGTGCATGTaGGGAAATCAGGACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: SFSGPTGGSLGTKLMPILGSGCM*GNQDNL Trigger: CAAGTTGTCCTGATTTCCTCACATGCACCCAGACCC...CAAGATAGGCATTAGTTTTGTTCCTAGGCTGCCTCCTGTAGGCCCCGAGAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR GCA 90 bp | GAAATTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTCAGGGCTGCATAGATaGTCTCATAGCTGTAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: EINKGYQSSIQLGCAVQHSGLHR*SHSCKS Trigger: GGACTTACAGCTATGAGAGCATCTATGCAGCCCTGA...GTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCTACTGGGGGATTCCTTCATTACCAATATTCTAAGGCGCCCTGTAGAGCAGAGCGGTAGGTACTaGCAACTCCATGCCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: PSLLGDSFITNILRRPVEQSGRY*QLHAYG Trigger: GCCATAGGCATGGAGTTGCCAGTACCTACCGCTCTG...CTCTACAGGGCGCCTTAGAATATTGGTAATGAAGGAATCCCCCAGTAGAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTTGTTTGAACTTTAATTATGGAAAGTGTGAGAACAGCAGAGATGAAGCCGCTGAGGCATCTCACTaGCCCACCTCAGCTCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: CVCLNFNYGKCENSRDEAAEASH*PTSALL Trigger: TAAGAGAGCTGAGGTGGGCCAGTGAGATGCCTCAGC...GGCTTCATCTCTGCTGTTCTCACACTTTCCATAATTAAAGTTCAAACAAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR CCA 72 bp | GGCACTGACGGGAAGTGTGCACAGAGCGGTAGGTACTaGCAACTCCATGCCTATGGCTCCAGCCACCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GTDGKCAQSGRY*QLHAYGSSHPA Trigger: GGCTGGGTGGCTGGAGCCATAGGCATGGAGTTGCCAGTACCTACCGCTCTGTGCACACTTCCCGTCAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR CCA 72 bp | CATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTaGTCTGACTGTAAAACATCAGGTAGAGCCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: HPAGLCRAALRS*SDCKTSGRALR Trigger: TCTCAGGGCTCTACCTGATGTTTTACAGTCAGACCAGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| 3UTR TCA 72 bp | AGCCAACGCAGGCCTCTGTTAAGCACCTTTCCTTGCTaGGGCATCTCACTGGCCCACCTCAGCTCTCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: SQRRPLLSTFPC*GISLAHLSSLR Trigger: CCTAAGAGAGCTGAGGTGGGCCAGTGAGATGCCTCAGCAAGGAAAGGTGCTTAACAGAGGCCTGCGTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR CAA 90 bp | TCGTTCTCGGGGCCTACAGGAGGCAGCCTAGGAACAAAACTAATGCCTATCTTGACATTTATTTGTTTATaGGGTCTGGGTGCATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SFSGPTGGSLGTKLMPILTFICL*GLGACE Trigger: CTCACATGCACCCAGACCCAATAAACAAATAAATGT...CAAGATAGGCATTAGTTTTGTTCCTAGGCTGCCTCCTGTAGGCCCCGAGAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR CAA 90 bp | ATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTTCCAGTCTTCCCTAACTaGAGCCTCTTGCCCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: IHLFVYWVWVHVRKSGQLPVFPN*SLLPSD Trigger: GTCTGAGGGCAAGAGGCTCAAGTTAGGGAAGACTGG...AAGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR-3UTR CAA 90 bp | ATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTTGTTAAGCACCTTTCCTaGCTGAGGCATCTCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: IHLFVYWVWVHVRKSGQLVKHLS*LRHLTG Trigger: GCCAGTGAGATGCCTCAGCAAGGAAAGGTGCTTAAC...AAGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| 3UTR CAA 72 bp | AGCAGCGACCTTGCAGAGGCCTCCTCTCAAGTAGCCTaGTGGGCAGCCAAGCTCGATCCAGCCCCGCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SSDLAEASSQVA*WAAKLDPAPRH Trigger: GTGCCGCGGGGCTGGATCGAGCTTGGCTGCCCACAAGGCTACTTGAGAGGAGGCCTCTGCAAGGTCGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | CTCCTCTCAAGTAGCCTTGTGGGCAGCCAAGCTCGATCCAGCCCCGCGGCACTGCACGGTGGCCCTCGCTaGAGTAGATGCTCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLSSSLVGSQARSSPAALHGGPR*SRCSSG Trigger: CCCTGAGGAGCATCTACTGCAGCGAGGGCCACCGTG...CAGTGCCGCGGGGCTGGATCGAGCTTGGCTGCCCACAAGGCTACTTGAGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | GGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGCTGCTGTGGGGAGGGTaGAAACCAATGCCTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GVSEQHPAGLCRAALRSWLLWGG*KPMPWD Trigger: GTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAG...CCAGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR TCA 90 bp | GGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGGATCACTGTGATGGGTaGCATGCAGACTCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GVSEQHPAGLCRAALRSWDHCDG*HADSCH Trigger: GTGGCAGGAGTCTGCATGTCACCCATCACAGTGATC...CCAGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCTCAAGTAGCCTTGTGGGCAGCCAAGCTCGATCCAGCCCCGCGGCACTGAGACGGTCCACGCCATaGCAGCCATCAGCGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSSSLVGSQARSSPAALRRSTP*QPSAFF Trigger: GAAGAACGCTGATGGCTGCCATGGCGTGGACCGTCT...CAGTGCCGCGGGGCTGGATCGAGCTTGGCTGCCCACAAGGCTACTTGAGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | AAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGCTGGAGGCTGCTGTaGGGAGGGTGGAAACCAATG | + |
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Preference number: 4 (lower is better) Translates to: KGYQSSIQLGCAVQHCGPGWRLL*GGWKPM Trigger: CATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCC...AGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR GCA 90 bp | TTCAGACAGCGCAGTCTTCACCTGACTCCGGGAGTGAGCTGCAGCAGCTCATGGCCTAGGTCTGAGGGCTaGAGGGCCTGCAGACGGGTT | + |
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Preference number: 4 (lower is better) Translates to: FRQRSLHLTPGVSCSSSWPRSEG*RACRRV Trigger: AACCCGTCTGCAGGCCCTGCAGCCCTCAGACCTAGG...CCATGAGCTGCTGCAGCTCACTCCCGGAGTCAGGTGAAGACTGCGCTGTCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | CTCCAGGGACACATCTCACAATGGACCTCTGGGATCTCCCTGCTGAGGGAAGGGCCTAGGTCTGAGGGCTaGAGGGCCTGCAGACGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LQGHISQWTSGISLLREGPRSEG*RACRRV Trigger: AACCCGTCTGCAGGCCCTGCAGCCCTCAGACCTAGG...CCCTTCCCTCAGCAGGGAGATCCCAGAGGTCCATTGTGAGATGTGTCCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS-3UTR TCA 90 bp | CCCACAGGAGAAATTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCAGCCCATGCCCAGGATaGCCGACTCCAGGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PTGEINKGYQSSIQLGCASPCPG*PTPGRW Trigger: CCACCGCCCTGGAGTCGGTCATCCTGGGCATGGGCT...GGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAATTTCTCCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCTCAAGTAGCCTTGTGGGCAGCCAAGCTCGATCCAGCCCCGCGGCACCCACTGAAACTTCACTaGGGAGAGCTGCATGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: ASSQVALWAAKLDPAPRHPLKLH*GELHVS Trigger: ACTCACATGCAGCTCTCCCCAGTGAAGTTTCAGTGG...GTGCCGCGGGGCTGGATCGAGCTTGGCTGCCCACAAGGCTACTTGAGAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | AAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTACATCTTCTAATGGCTaGAGGCTGCTGTGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KGYQSSIQLGCAVQHCGPTSSNG*RLLWGG Trigger: CCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGT...AGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR TCA 90 bp | CTTGAGCCTCTTGCCCTCAGACATGGCAGGAGGCCCACACCTTCTCTACTGGGGGATCACTGTGATGGGTaGCATGCAGACTCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LEPLALRHGRRPTPSLLGDHCDG*HADSCH Trigger: GTGGCAGGAGTCTGCATGTCACCCATCACAGTGATC...CCCCAGTAGAGAAGGTGTGGGCCTCCTGCCATGTCTGAGGGCAAGAGGCTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | CATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGTCTGACTGTAAAACACTAATGGCTGGAGGCTaGTGTGGGGAGGGTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HPAGLCRAALRSWSDCKTLMAGG*CGEGGN Trigger: GTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAG...TGTTTTACAGTCAGACCAGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGTCTGACTGTAAAACATCAGGTACATCCCAACACGTCTaGGCCCTAGGTCTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGLCRAALRSWSDCKTSGTSQHV*ALGLRA Trigger: AGCCCTCAGACCTAGGGCCCAGACGTGTTGGGATGT...ACCTGATGTTTTACAGTCAGACCAGGACCGCAGTGCTGCACGGCACAGCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CCA 90 bp | CGTGTCTTGATCACTGTGATGGGTGACATGCAGACTCCTGCCACAGAGCGGGAGGGCTGGAGGCTGCTGTaGGGAGGGTGGAAACCAATG | + |
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Preference number: 4 (lower is better) Translates to: RVLITVMGDMQTPATEREGWRLL*GGWKPM Trigger: CATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCC...CTCCCGCTCTGTGGCAGGAGTCTGCATGTCACCCATCACAGTGATCAAGACACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS-3UTR GCA 90 bp | CCCACAGGAGAAATTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCCCTAGGTCTGAGGGCTaGAGGGCCTGCAGACGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PTGEINKGYQSSIQLGCAPRSEG*RACRRV Trigger: AACCCGTCTGCAGGCCCTGCAGCCCTCAGACCTAGG...GGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAATTTCTCCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCTCAAGTAGCCTTGTGGGCAGCCAAGCTCGATCCAGCCCCGCGGCACTGCCAGGAGACTTTCTGTaGGAACCACCTTCAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LLSSSLVGSQARSSPAALPGDFL*EPPSRT Trigger: TGTTCTTGAAGGTGGTTCGCACAGAAAGTCTCCTGG...CAGTGCCGCGGGGCTGGATCGAGCTTGGCTGCCCACAAGGCTACTTGAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | CTTCAGACAGCGCAGTCTTCACCTGACTCCGGGAGTGAGCTGCAGCAGCTCATGATCACGGAGGAGAGTTaGTGTCAGGCCCCTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LQTAQSSPDSGSELQQLMITEES*CQAPEE Trigger: CTCTTCAGGGGCCTGACAGCAACTCTCCTCCGTGAT...CATGAGCTGCTGCAGCTCACTCCCGGAGTCAGGTGAAGACTGCGCTGTCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGGACACATCTCACAATGGACCTCTGGGATCTCCCTGCTGAGGGAAGGCTGCTGTGGGGAGGGTaGAAACCAATGCCTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: TPGTHLTMDLWDLPAEGRLLWGG*KPMPWD Trigger: GTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAG...CCTTCCCTCAGCAGGGAGATCCCAGAGGTCCATTGTGAGATGTGTCCCTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS-3UTR CCA 90 bp | ACTCCAGGGACACATCTCACAATGGACCTCTGGGATCTCCCTGCTGAGGGAAGGCCATCTTCTAATGGCTaGAGGCTGCTGTGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TPGTHLTMDLWDLPAEGRPSSNG*RLLWGG Trigger: CCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGG...CCTTCCCTCAGCAGGGAGATCCCAGAGGTCCATTGTGAGATGTGTCCCTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| 3UTR CAA 72 bp | TGGGAGCCAACGCAGGCCTCTGTTAAGCACCTTTCCTaGCTGAGGCATCTCACTGGCCCACCTCAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: WEPTQASVKHLS*LRHLTGPPQLS Trigger: AGAGAGCTGAGGTGGGCCAGTGAGATGCCTCAGCAAGGAAAGGTGCTTAACAGAGGCCTGCGTTGGCTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | AGCAATTCTCTCCTCCACCATATGGGTCCTGGGAGCCAACGCAGGCCTCTGTTAGGGCTCGGGGAACACTaGCATGAAAGAAGCCACGCA | + |
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Preference number: 4 (lower is better) Translates to: SNSLLHHMGPGSQRRPLLGLGEH*HERSHA Trigger: TGCGTGGCTTCTTTCATGGCAGTGTTCCCCGAGCCC...TAACAGAGGCCTGCGTTGGCTCCCAGGACCCATATGGTGGAGGAGAGAATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | GGACACATCTCACAATGGACCTCTGGGATCTCCCTGCTGAGGGAAGGGTGTAGTCTAATGGCTGGAGGCTaGTGTGGGGAGGGTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GHISQWTSGISLLREGCSLMAGG*CGEGGN Trigger: GTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAG...ACTACACCCTTCCCTCAGCAGGGAGATCCCAGAGGTCCATTGTGAGATGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS-3UTR CCA 90 bp | CATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGTCTGACTGTAAAACAAGGAGATCCAAAGGCTaGAAGAGGAGCGTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: HPAGLCRAALRSWSDCKTRRSKG*KRSVEQ Trigger: CTGTTCCACGCTCCTCTTCCAGCCTTTGGATCTCCT...TGTTTTACAGTCAGACCAGGACCGCAGTGCTGCACGGCACAGCCCAGCTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR GCA 90 bp | CTTGAGCCTCTTGCCCTCAGACATGGCAGGAGGCCCACACCTTCTCTACTGGGGTCAGGGCTGCATAGATaGTCTCATAGCTGTAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LEPLALRHGRRPTPSLLGSGLHR*SHSCKS Trigger: GGACTTACAGCTATGAGAGCATCTATGCAGCCCTGA...CCCCAGTAGAGAAGGTGTGGGCCTCCTGCCATGTCTGAGGGCAAGAGGCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | CGTGTCTTGATCACTGTGATGGGTGACATGCAGACTCCTGCCACAGAGCGGGAGAGGAGATCCAAAGGCTaGAAGAGGAGCGTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: RVLITVMGDMQTPATERERRSKG*KRSVEQ Trigger: CTGTTCCACGCTCCTCTTCCAGCCTTTGGATCTCCT...CTCCCGCTCTGTGGCAGGAGTCTGCATGTCACCCATCACAGTGATCAAGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS-3UTR CCA 90 bp | TCGTTCTCGGGGCCTACAGGAGGCAGCCTAGGAACAAAACTAATGCCTATCTTGAGAGCAGCATCCAGCTaGGCTGTGCCGTGCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SFSGPTGGSLGTKLMPILRAASS*AVPCST Trigger: AGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCT...CAAGATAGGCATTAGTTTTGTTCCTAGGCTGCCTCCTGTAGGCCCCGAGAACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | CAGCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGTCTGACTGTAAAACATCAGCCTCGCAAGAAATACTaGTTCGAAGAATACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLGCAVQHCGPGLTVKHQPRKKY*FEEYRV Trigger: CACCCTGTATTCTTCGAAGCAGTATTTCTTGCGAGG...CTGATGTTTTACAGTCAGACCAGGACCGCAGTGCTGCACGGCACAGCCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR GCA 90 bp | ACATGGCAGGAGGCCCACACCTTCTCTACTGGGGGATTCCTTCATTACCAATATTGTGCCGTGCAGCACTaGGGTCCTGGTCTGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TWQEAHTFSTGGFLHYQYCAVQH*GPGLTV Trigger: TACAGTCAGACCAGGACCGCAGTGCTGCACGGCACA...ATATTGGTAATGAAGGAATCCCCCAGTAGAGAAGGTGTGGGCCTCCTGCCATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | GCTGGGCTGTGCCGTGCAGCACTGCGGTCCTGGTCTGACTGTAAAACATCAGGTGGACACATCTCACAATaGACATCTTCTAATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLCRAALRSWSDCKTSGGHISQ*TSSNGW Trigger: CCAGCCATTAGAAGATGTCCATTGTGAGATGTGTCC...ACCTGATGTTTTACAGTCAGACCAGGACCGCAGTGCTGCACGGCACAGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTCTCCTCCACCATATGGGTCCTGGGAGCCAACGCAGGCCTCTGTTAGGACACATCTCACAATaGAAGGAGACATCCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSLLHHMGPGSQRRPLLGHISQ*KETSLS Trigger: GGAAAGGGATGTCTCCTTCCATTGTGAGATGTGTCC...TAACAGAGGCCTGCGTTGGCTCCCAGGACCCATATGGTGGAGGAGAGAATTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | GAAATTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTCGAAGAATACAGGGTaGCAAAGTAGATCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EINKGYQSSIQLGCAVQHSKNTG*QSRSPL Trigger: GAGTGGGGATCTACTTTGGCACCCTGTATTCTTCGA...GTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR TCA 90 bp | TGTGTTTGTTTGAACTTTAATTATGGAAAGTGTGAGAACAGCAGAGATGAAGCCAGCCCATGCCCAGGATaGCCGACTCCAGGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCLNFNYGKCENSRDEASPCPG*PTPGRW Trigger: CCACCGCCCTGGAGTCGGTCATCCTGGGCATGGGCT...GGCTTCATCTCTGCTGTTCTCACACTTTCCATAATTAAAGTTCAAACAAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR TCA 90 bp | AATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTCATCAGGTAGAGCCCTaGGAAGGGGGCATCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTFICLLGLGACEEIRTTHQVEP*EGGITE Trigger: CTCCGTGATGCCCCCTTCTCAGGGCTCTACCTGATG...AGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | AATATCCCACAGGAGAAATTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTCCAGGAGACTTTCTGTaGGAACCACCTTCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NIPQEKLIRGIRAASSWAPGDFL*EPPSRT Trigger: TGTTCTTGAAGGTGGTTCGCACAGAAAGTCTCCTGG...AGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAATTTCTCCTGTGGGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CCA 90 bp | ATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTTACATCCCAACACGTCTaGGCCCTAGGTCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHLFVYWVWVHVRKSGQLTSQHV*ALGLRA Trigger: AGCCCTCAGACCTAGGGCCCAGACGTGTTGGGATGT...AAGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CCA 90 bp | ATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTTAGGAGATCCAAAGGCTaGAAGAGGAGCGTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IHLFVYWVWVHVRKSGQLRRSKG*KRSVEQ Trigger: CTGTTCCACGCTCCTCTTCCAGCCTTTGGATCTCCT...AAGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR TCA 90 bp | AATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTGCTGCATGTGAGTTTTaGTCACGTCTGCAGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTFICLLGLGACEEIRTTAACEF*SRLQVE Trigger: CTCAACCTGCAGACGTGATCAAAACTCACATGCAGC...AGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | ATACATTTATTTGTTTATTGGGTCTGGGTGCATGTGAGGAAATCAGGACAACTTTCGAAGAATACAGGGTaGCAAAGTAGATCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: IHLFVYWVWVHVRKSGQLSKNTG*QSRSPL Trigger: GAGTGGGGATCTACTTTGGCACCCTGTATTCTTCGA...AAGTTGTCCTGATTTCCTCACATGCACCCAGACCCAATAAACAAATAAATGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR GCA 90 bp | TGTGTTTGTTTGAACTTTAATTATGGAAAGTGTGAGAACAGCAGAGATGAAGCCCCTCGCAAGAAATACTaGTTCGAAGAATACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCLNFNYGKCENSRDEAPRKKY*FEEYRV Trigger: CACCCTGTATTCTTCGAAGCAGTATTTCTTGCGAGG...GGCTTCATCTCTGCTGTTCTCACACTTTCCATAATTAAAGTTCAAACAAACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS GCA 90 bp | GGGTGTAACATGAGCGTCTCCACCGTGTCCTCTACATCCTGCGACTaGAGCAGCGCCGAGCGTGCCTTCTCGATCACTGGGGACGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCNMSVSTVSSTSCD*SSAERAFSITGDAS Trigger: GCTCGCGTCCCCAGTGATCGAGAAGGCACGCTCGGCGCTGCTGCAGTCGCAGGATGTAGAGGACACGGTGGAGACGCTCATGTTACACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035106.12 ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS GCA 90 bp | ATCACTGGGTGTAACATGAGCGTCTCCACCGTGTCCTCTACATCCTaGGACTGCAGCAGCGCCGAGCGTGCCTTCTCGATCACTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ITGCNMSVSTVSSTS*DCSSAERAFSITGD Trigger: GTCCCCAGTGATCGAGAAGGCACGCTCGGCGCTGCTGCAGTCGCAGGATGTAGAGGACACGGTGGAGACGCTCATGTTACACCCAGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035106.12 ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS GCA 90 bp | AACACAGCCAACATCCCAACACGTCTGGGCCCTAGGTCTGAGGGCTaGAGGGCCTGCAGACGGGTTTTGAGGAGATCCAAAGGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTANIPTRLGPRSEG*RACRRVLRRSKGWK Trigger: CTTCCAGCCTTTGGATCTCCTCAAAACCCGTCTGCAGGCCCTGCAGCCCTCAGACCTAGGGCCCAGACGTGTTGGGATGTTGGCTGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035106.12 ENSMUST00000135514.2 ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS GCA 90 bp | CATCTTCTAATGGCTGGAGGCTGCTGTGGGGAGGGTGGAAACCAATaGCTTGGGACTTCCGGCAAGGTGGGTCAGGAGACATCCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLMAGGCCGEGGNQ*LGTSGKVGQETSLS Trigger: GGAAAGGGATGTCTCCTGACCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS CCA 90 bp | TCTAATGGCTGGAGGCTGCTGTGGGGAGGGTGGAAACCAATGCCTTaGGACTTCCGGCAAGGTGGGTCAGGAGACATCCCTTTCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNGWRLLWGGWKPMP*DFRQGGSGDIPFQR Trigger: CCTTTGGAAAGGGATGTCTCCTGACCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS-3UTR CAA 90 bp | TTAATAAGGGGTATCAGAGCAGCATCCAGCTGGGCTGTGCCGTGCAGCACTGCGGTGGAAACCAATGCCTaGGGACTTCCGGCAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LIRGIRAASSWAVPCSTAVETNA*GLPARW Trigger: CCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCAC...CGCAGTGCTGCACGGCACAGCCCAGCTGGATGCTGCTCTGATACCCCTTATTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS TCA 90 bp | GCTGTAAGTCCCACTCTCATAGCGTGTCTTGATCACTGTGATGGGTaGCATGCAGACTCCTGCCACAGAGCGGGAGCCCATGCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVSPTLIACLDHCDG*HADSCHRAGAHAQD Trigger: ATCCTGGGCATGGGCTCCCGCTCTGTGGCAGGAGTCTGCATGTCACCCATCACAGTGATCAAGACACGCTATGAGAGTGGGACTTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035106.12 ENSMUST00000135514.2 |
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| CDS CCA 90 bp | TCACAATGGACATCTTCTAATGGCTGGAGGCTGCTGTGGGGAGGGTaGAAACCAATGCCTTGGGACTTCCGGCAAGGTGGGTCAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQWTSSNGWRLLWGG*KPMPWDFRQGGSGD Trigger: GTCTCCTGACCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGTCCATTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CAA 90 bp | GGACACATCTCACAATGGACCTCTGGGATCTCCCTGCTGAGGGAAGGGTGTAGTGTGGAAACCAATGCCTaGGGACTTCCGGCAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHISQWTSGISLLREGCSVETNA*GLPARW Trigger: CCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCAC...ACTACACCCTTCCCTCAGCAGGGAGATCCCAGAGGTCCATTGTGAGATGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS GCA 90 bp | TCCAGGGACACATCTCACAATGGACATCTTCTAATGGCTGGAGGCTaGTGTGGGGAGGGTGGAAACCAATGCCTTGGGACTTCCGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRDTSHNGHLLMAGG*CGEGGNQCLGTSGK Trigger: CTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGTCCATTGTGAGATGTGTCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS-3UTR CAA 90 bp | CTCTTGCCCTCAGACATGGCAGGAGGCCCACACCTTCTCTACTGGGGGATTCCTGATGAGAGTGGCTGCTaGGCCAATCCACTGAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPSDMAGGPHLLYWGIPDESGC*ANPLKL Trigger: AAGTTTCAGTGGATTGGCCAAGCAGCCACTCTCATC...AGGAATCCCCCAGTAGAGAAGGTGTGGGCCTCCTGCCATGTCTGAGGGCAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTACTGGGGGATTCCTTCATTACCAATATTCTAAGGCGCCCTGTAGAGCGCAGCCCATGGTTCTaGAAGATGAGAGTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLLGDSFITNILRRPVERSPWF*KMRVAA Trigger: AGCAGCCACTCTCATCTTCAAGAACCATGGGCTGCG...CTCTACAGGGCGCCTTAGAATATTGGTAATGAAGGAATCCCCCAGTAGAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035106.12 |
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| CDS GCA 72 bp | ATGAGCGTCTCCACCGTGTCCTCTACATCCTGCGACTaGAGCAGCGCCGAGCGTGCCTTCTCGATCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MSVSTVSSTSCD*SSAERAFSITG Trigger: CCCAGTGATCGAGAAGGCACGCTCGGCGCTGCTGCAGTCGCAGGATGTAGAGGACACGGTGGAGACGCTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035106.12 ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS CAA 72 bp | CTGGAGGCTGCTGTGGGGAGGGTGGAAACCAATGCCTaGGGACTTCCGGCAAGGTGGGTCAGGAGACATCCC | + |
|
Preference number: 6 (lower is better) Translates to: LEAAVGRVETNA*GLPARWVRRHP Trigger: GGGATGTCTCCTGACCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS GCA 72 bp | ATGGCTGGAGGCTGCTGTGGGGAGGGTGGAAACCAATaGCTTGGGACTTCCGGCAAGGTGGGTCAGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: MAGGCCGEGGNQ*LGTSGKVGQET Trigger: TGTCTCCTGACCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS CCA 72 bp | TGGAGGCTGCTGTGGGGAGGGTGGAAACCAATGCCTTaGGACTTCCGGCAAGGTGGGTCAGGAGACATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WRLLWGGWKPMP*DFRQGGSGDIP Trigger: AGGGATGTCTCCTGACCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS GCA 72 bp | TGTAACATGAGCGTCTCCACCGTGTCCTCTACATCCTaGGACTGCAGCAGCGCCGAGCGTGCCTTCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: CNMSVSTVSSTS*DCSSAERAFSI Trigger: GATCGAGAAGGCACGCTCGGCGCTGCTGCAGTCGCAGGATGTAGAGGACACGGTGGAGACGCTCATGTTACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035106.12 ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS CCA 72 bp | CCATCTTCTAATGGCTGGAGGCTGCTGTGGGGAGGGTaGAAACCAATGCCTTGGGACTTCCGGCAAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSNGWRLLWGG*KPMPWDFRQGG Trigger: CCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150093.8 |
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| CDS GCA 72 bp | AACATCCCAACACGTCTGGGCCCTAGGTCTGAGGGCTaGAGGGCCTGCAGACGGGTTTTGAGGAGATCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NIPTRLGPRSEG*RACRRVLRRSK Trigger: TTTGGATCTCCTCAAAACCCGTCTGCAGGCCCTGCAGCCCTCAGACCTAGGGCCCAGACGTGTTGGGATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035106.12 ENSMUST00000135514.2 ENSMUST00000144768.8 ENSMUST00000150093.8 |
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| CDS CCA 72 bp | ACATCTTCTAATGGCTGGAGGCTGCTGTGGGGAGGGTaGAAACCAATGCCTTGGGACTTCCGGCAAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSNGWRLLWGG*KPMPWDFRQGG Trigger: CCCACCTTGCCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS TCA 72 bp | CCCACTCTCATAGCGTGTCTTGATCACTGTGATGGGTaGCATGCAGACTCCTGCCACAGAGCGGGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PTLIACLDHCDG*HADSCHRAGAH Trigger: ATGGGCTCCCGCTCTGTGGCAGGAGTCTGCATGTCACCCATCACAGTGATCAAGACACGCTATGAGAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035106.12 ENSMUST00000135514.2 |
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| CDS CCA 72 bp | TCACAATGGACATCTTCTAATGGCTGGAGGCTGCTGTaGGGAGGGTGGAAACCAATGCCTTGGGACTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SQWTSSNGWRLL*GGWKPMPWDFR Trigger: CCGGAAGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGTCCATTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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| CDS GCA 72 bp | ACATCTCACAATGGACATCTTCTAATGGCTGGAGGCTaGTGTGGGGAGGGTGGAAACCAATGCCTTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: TSHNGHLLMAGG*CGEGGNQCLGT Trigger: AGTCCCAAGGCATTGGTTTCCACCCTCCCCACAGCAGCCTCCAGCCATTAGAAGATGTCCATTGTGAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144768.8 |
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