Pregenerated sensors for SLC25A36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032449Ensembl transcript IDs: ENSMUST00000035024.8, ENSMUST00000085206.11, ENSMUST00000124250.3, ENSMUST00000153070.8
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTTTTTCCTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTaGCAGCAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTA | + |
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Preference number: 1 (lower is better) Translates to: WFFLPPCEPHSGGQT*QQAPHLLSHLACPL Trigger: TAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTGCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
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| 3UTR TCA 90 bp | TTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTaGTCTTTTGGTCTTCCTGCTCTGCAGTATGGCAGCCCTTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FCPPCWLASRFHGPL*SFGLPALQYGSPCC Trigger: GCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR CCA 90 bp | ATTCCATGGTCCACTGTGATCTTTTGGTCTTCCTGCTCTGCAGTATaGCAGCCCTTGCTGCTATCCGTTGAGAAGGTAGACCACCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: IPWSTVIFWSSCSAV*QPLLLSVEKVDHQF Trigger: GAACTGGTGGTCTACCTTCTCAACGGATAGCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGACCATGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR TCA 90 bp | TGGCCAATCTTTACCGCTCATCCTGAGAAGGGAGGCAGAGACCTGTaGGGCTGTTTTGATTCAGAGTCGTATCACCATGGCGTTAATTTC | + |
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Preference number: 1 (lower is better) Translates to: WPIFTAHPEKGGRDL*GCFDSESYHHGVNF Trigger: GAAATTAACGCCATGGTGATACGACTCTGAATCAAAACAGCCTCACAGGTCTCTGCCTCCCTTCTCAGGATGAGCGGTAAAGATTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| 3UTR GCA 90 bp | TACCGACTGCTACATGTTATCCCTGAAGGACACTTATTGTGGACTTaGTACGACAACACAAGCTGTTCCTTGGCTGCTGGTTTTCATGTC | + |
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Preference number: 1 (lower is better) Translates to: YRLLHVIPEGHLLWT*YDNTSCSLAAGFHV Trigger: GACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CCA 90 bp | TTGGACAGAAGAGCATGTGAACTGAGAAATACGAAGGAAGGGCCTTaGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: LDRRACELRNTKEGP*RKGDTDIYHLSSSN Trigger: GTTTGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTTCGTATTTCTCAGTTCACATGCTCTTCTGTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CCA 90 bp | GTAAAATACCGACTGCTACATGTTATCCCTGAAGGACACTTATTGTaGACTTGCTACGACAACACAAGCTGTTCCTTGGCTGCTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VKYRLLHVIPEGHLL*TCYDNTSCSLAAGF Trigger: AAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CCA 90 bp | CTTATTGTGGACTTGCTACGACAACACAAGCTGTTCCTTGGCTGCTaGTTTTCATGTCATTCTTCATCATCTGAGATCTGTGTAACACAG | + |
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Preference number: 1 (lower is better) Translates to: LIVDLLRQHKLFLGC*FSCHSSSSEICVTQ Trigger: CTGTGTTACACAGATCTCAGATGATGAAGAATGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR GCA 90 bp | ACACTTATTGTGGACTTGCTACGACAACACAAGCTGTTCCTTGGCTaGTGGTTTTCATGTCATTCTTCATCATCTGAGATCTGTGTAACA | + |
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Preference number: 1 (lower is better) Translates to: TLIVDLLRQHKLFLG*WFSCHSSSSEICVT Trigger: TGTTACACAGATCTCAGATGATGAAGAATGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR TCA 90 bp | AATGTGAGTTTTACTTGTAAAATACCGACTGCTACATGTTATCCCTaGAGGACACTTATTGTGGACTTGCTACGACAACACAAGCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: NVSFTCKIPTATCYP*RTLIVDLLRQHKLF Trigger: GAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTTTACAAGTAAAACTCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CCA 90 bp | GCAAAGCTCATCAGCTCTTTTAAAGCTGACTACACTGTGAGTGATTaGTATAATTTAATTCACATCCACTGGGGTACATTCAGAAAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: AKLISSFKADYTVSD*YNLIHIHWGTFRKV Trigger: AACCTTTCTGAATGTACCCCAGTGGATGTGAATTAAATTATACCAATCACTCACAGTGTAGTCAGCTTTAAAAGAGCTGATGAGCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CCA 90 bp | ATAAAAACTCCCAGGAATTACCTATCTTATTCAAGACCTCCAAGCTaGCAAATCAGAGGATACAGTATCTTGACTTTAAACACTGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: IKTPRNYLSYSRPPS*QIRGYSILTLNTVP Trigger: AGGGACAGTGTTTAAAGTCAAGATACTGTATCCTCTGATTTGCCAGCTTGGAGGTCTTGAATAAGATAGGTAATTCCTGGGAGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| 3UTR TCA 90 bp | AATGTGAAGTATTTAGATACTACTTCACTGGCTGTCAAAATACAGTaGTTATGGGTGTCAGATAACATAAAACACTGTAACAGGCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: NVKYLDTTSLAVKIQ*LWVSDNIKHCNRQA Trigger: GGCCTGCCTGTTACAGTGTTTTATGTTATCTGACACCCATAATCACTGTATTTTGACAGCCAGTGAAGTAGTATCTAAATACTTCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CAA 90 bp | AGCGAGCTGTGCATCAGCCGCAGGGGTCCCTATCAGACGGGCAGATaGGACAGAAGAGCATGTGAACTGAGAAATACGAAGGAAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SELCISRRGPYQTGR*DRRACELRNTKEGP Trigger: AGGCCCTTCCTTCGTATTTCTCAGTTCACATGCTCTTCTGTCCAATCTGCCCGTCTGATAGGGACCCCTGCGGCTGATGCACAGCTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTGGAGCTGCTGCTGTGTaGGGGTTGCTTCTAGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGGAAAV*GLLLVA Trigger: AGCTACTAGAAGCAACCCTCACACAGCAGCAGCTCC...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR CAA 90 bp | TCCACTGTGATCTTTTGGTCTTCCTGCTCTGCAGTATGGCAGCCCTaGCTGCTATCCGTTGAGAAGGTAGACCACCAGTTCGTAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: STVIFWSSCSAVWQP*LLSVEKVDHQFVGG Trigger: GCCACCTACGAACTGGTGGTCTACCTTCTCAACGGATAGCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTTTGGTCTTCCTGCTCTaGAGTATGGCAGCCCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGLVFLL*SMAALA Trigger: AGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAA...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | ACTACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGACAGGCAGGCCCTCCTaGGGAAGTGTTACTGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: TTVFCPPCWLASRFHGPLTGRPS*GSVTED Trigger: ATCCTCAGTAACACTTCCCCAGGAGGGCCTGCCTGT...CAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR GCA 90 bp | ACTACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTTGGTCTTCCTGCTCTaGAGTATGGCAGCCCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TTVFCPPCWLASRFHGPLLVFLL*SMAALA Trigger: AGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAA...CAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 ENSMUST00000153070.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCATAGGAGGCAGACATGCCCCTATAAAATCCTCGCAGTCCGTCTGTCTGTCCACTGTGATCTTTTaGTCTTCCTGCTCTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: AGIGGRHAPIKSSQSVCLSTVIF*SSCSAV Trigger: TACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGA...CAGACAGACGGACTGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATGCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTTTTTCCTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTGGCAGCTATCCCATGACAGCTTaGCAACTCACCATCTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: VGFSSHHVNPTQVVRLGSYPMTA*QLTIWI Trigger: AATCCAGATGGTGAGTTGCCAAGCTGTCATGGGATA...GCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
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| 3UTR CAA 90 bp | TTACCGCTCATCCTGAGAAGGGAGGCAGAGACCTGTGAGGCTGTTTaGATTCAGAGTCGTATCACCATGGCGTTAATTTCCTGGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LPLILRREAETCEAV*IQSRITMALISWEH Trigger: ATGCTCCCAGGAAATTAACGCCATGGTGATACGACTCTGAATCAAAACAGCCTCACAGGTCTCTGCCTCCCTTCTCAGGATGAGCGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| 3UTR-3UTR TCA 90 bp | CTATCCGTTGAGAAGGTAGACCACCAGTTCGTAGGTGGCCATCATAATGGCCGTTTCCATGGTCCACTGTaGTCTTTTGGTCTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LSVEKVDHQFVGGHHNGRFHGPL*SFGLPA Trigger: AGCAGGAAGACCAAAAGATCACAGTGGACCATGGAA...ACGGCCATTATGATGGCCACCTACGAACTGGTGGTCTACCTTCTCAACGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR-3UTR GCA 90 bp | ACTACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGCATAGGAGGCAGACATaGCCCTATAAAATCCTCGCA | + |
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Preference number: 2 (lower is better) Translates to: TTVFCPPCWLASRFHGPLHRRQT*PYKILA Trigger: TGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATG...CAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR CAA 90 bp | GACAGCTTGGCAACTCACCATCTGGATTATCCAAATTTCAAGCATTaGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: DSLATHHLDYPNFKH*SHRSCCCVRVASSS Trigger: GCTACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATTTGGATAATCCAGATGGTGAGTTGCCAAGCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTATTCCATGGTCCACTGTaGTCTTTTGGTCTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QQAPHLLSHLACPLPSFLFHGPL*SFGLPA Trigger: AGCAGGAAGACCAAAAGATCACAGTGGACCATGGAA...TAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
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| 3UTR-3UTR GCA 90 bp | ATATGCCGGCATAGGAGGCAGACATGCCCCTATAAAATCCTCGCAGTCCGTCTGCCAAATGGGGTTTGTTaGAGTGATTGCAGTAAAACC | + |
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Preference number: 2 (lower is better) Translates to: ICRHRRQTCPYKILAVRLPNGVC*SDCSKT Trigger: GGTTTTACTGCAATCACTGCAACAAACCCCATTTGG...CAGACGGACTGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATGCCGGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| 3UTR-3UTR CCA 90 bp | ACTACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGGGCTTCAAGATTCCATaGTCCACTGTGATCTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: TTVFCPPCWLASRFHGPLGFKIP*STVIFW Trigger: CCAAAAGATCACAGTGGACCATGGAATCTTGAAGCC...CAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 ENSMUST00000153070.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTGCCAGGGTTTACTCACTaGAAGATTAATGTCGTATGG | + |
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Preference number: 2 (lower is better) Translates to: YCLLSTMLAGFKIPWSTVPGFTH*KINVVW Trigger: CCATACGACATTAATCTTTCAGTGAGTAAACCCTGG...CACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTGACAAACTGGAGCTGGTaGACAATAGAGAAAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: YCLLSTMLAGFKIPWSTVTNWSW*TIEKMA Trigger: TGCCATTTTCTCTATTGTTCACCAGCTCCAGTTTGT...CACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | GTTGGTTTTTCCTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTGGCAGCATTAAACTTCATTGGTaGCAGCAGAGAAAGCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: VGFSSHHVNPTQVVRLGSIKLHW*QQRKLS Trigger: TGAAAGCTTTCTCTGCTGTCACCAATGAAGTTTAAT...GCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | CAAATAAGCATACACAGCAGCTGTCCAACCATGCATTTGGCTGAGTACTGTAAACTTTACCGCTCATCCTaGGAAGGGAGGCAGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: QISIHSSCPTMHLAEYCKLYRSS*EGRQRP Trigger: AGGTCTCTGCCTCCCTTCTCAGGATGAGCGGTAAAG...TTTACAGTACTCAGCCAAATGCATGGTTGGACAGCTGCTGTGTATGCTTATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| 3UTR-3UTR CCA 90 bp | AATTTCAAGCATTTGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTTCCACTGTGATCTTTTaGTCTTCCTGCTCTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: NFKHLSHRSCCCVRVASSSTVIF*SSCSAV Trigger: TACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGA...ACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAGGCTTCAAGATTCCATaGTCCACTGTGATCTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSGFKIP*STVIFW Trigger: CCAAAAGATCACAGTGGACCATGGAATCTTGAAGCC...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAATTAGGCAGTATCAGTaGCACCTGAAGAGGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSIRQYQ*HLKRQT Trigger: TGTTTGCCTCTTCAGGTGCCACTGATACTGCCTAAT...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | CAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAATCACACAAGCTGTTCCTTaGCTGCTGGTTTTCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: QAPHLLSHLACPLPSFLITQAVP*LLVFMS Trigger: TGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGT...GATTAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCATTGTACAATGAGAACTaGAACAAGGTCCGTGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSLYNEN*NKVRER Trigger: ACGCTCACGGACCTTGTTCCAGTTCTCATTGTACAA...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAGCATACACAGCAGCTGTCCAACCATGCATTTGGCTGAGTACTGTAAAGCTGTGTGTGCTGACTaGAGTGGCAAAACTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QISIHSSCPTMHLAEYCKAVCAD*SGKTAK Trigger: CTTGGCAGTTTTGCCACTCCAGTCAGCACACACAGC...TTTACAGTACTCAGCCAAATGCATGGTTGGACAGCTGCTGTGTATGCTTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAACAAACTGGAGCTGGTaGACAATAGAGAAAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSTNWSW*TIEKMA Trigger: TGCCATTTTCTCTATTGTTCACCAGCTCCAGTTTGT...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAGCAAACACTATAGCCTaGGACCTTCTCTACACATTT | + |
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Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSANTIA*DLLYTF Trigger: AAATGTGTAGAGAAGGTCTCAGGCTATAGTGTTTGC...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR TCA 90 bp | TCACCTGTGACTCTAGCAGTAATACTGCACATCCATACTTATGGAATATTTTGGAGAGGCTGTGTGTGCTaGCTGGAGTGGCAAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: SPVTLAVILHIHTYGIFWRGCVC*LEWQNC Trigger: GCAGTTTTGCCACTCCAGTCAGCACACACAGCCTCT...CCAAAATATTCCATAAGTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| 3UTR-3UTR CCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTACAGGCAGGCCCTCCTaGGGAAGTGTTACTGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVTGRPS*GSVTED Trigger: ATCCTCAGTAACACTTCCCCAGGAGGGCCTGCCTGT...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | AATTTCAAGCATTTGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTCTGTTCCTTGGCTGCTaGTTTTCATGTCATTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: NFKHLSHRSCCCVRVASSLFLGC*FSCHSS Trigger: TGAAGAATGACATGAAAACCAGCAGCCAAGGAACAG...ACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| 3UTR-3UTR CCA 90 bp | CAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAATCCTGTTCCTTGGCTGCTaGTTTTCATGTCATTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QAPHLLSHLACPLPSFLILFLGC*FSCHSS Trigger: TGAAGAATGACATGAAAACCAGCAGCCAAGGAACAG...GATTAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
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| 3UTR CAA 90 bp | GAAGGACACTTATTGTGGACTTGCTACGACAACACAAGCTGTTCCTaGGCTGCTGGTTTTCATGTCATTCTTCATCATCTGAGATCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EGHLLWTCYDNTSCS*AAGFHVILHHLRSV Trigger: CACAGATCTCAGATGATGAAGAATGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR TCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCGGAGGCAGAGACCTGTaGGGCTGTTTTGATTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KHCPFQNVNQSTIVKCTAGGRDL*GCFDSE Trigger: CTCTGAATCAAAACAGCCTCACAGGTCTCTGCCTCC...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCACCTGCATCACATAATTaGAAAAGGTATGAGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSPASHN*KRYEDA Trigger: AGCATCCTCATACCTTTTCCAATTATGTGATGCAGG...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAATCTGGCAACTCACCATCTaGATTATCCAAATTTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: QAPHLLSHLACPLPSFLIWQLTI*IIQISS Trigger: GCTTGAAATTTGGATAATCCAGATGGTGAGTTGCCA...GATTAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | GCATACACAGCAGCTGTCCAACCATGCATTTGGCTGAGTACTGTAAACTTTCTAAACAGGTGCCATGGTTaGTACACTCAGAAGGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: AYTAAVQPCIWLSTVNFLNRCHG*YTQKVT Trigger: AGTAACCTTCTGAGTGTACCAACCATGGCACCTGTT...TAGAAAGTTTACAGTACTCAGCCAAATGCATGGTTGGACAGCTGCTGTGTATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTAATAAGGCTACCAAAAGTGGACAAAGGACCAGGCTGTGTGACCTAACATTCACAAAGTCATTCTaGAGAGAAAGCCATTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: HPNKATKSGQRTRLCDLTFTKSF*RESHCT Trigger: TGTGCAATGGCTTTCTCTTCAGAATGACTTTGTGAA...TGTTAGGTCACACAGCCTGGTCCTTTGTCCACTTTTGGTAGCCTTATTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR TCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCATGCATGGCAGCAAATaGCTCCAGAGTCAGAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: KHCPFQNVNQSTIVKCTAMHGSK*LQSQNG Trigger: GCCATTCTGACTCTGGAGTCATTTGCTGCCATGCAT...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR TCA 90 bp | CGCGGTAAAGAGATCCATAGCCTTCTTCTTGAACAATCAAAGACAATGTTTGAAATGGATAACAGTCTCTaGTATGCCGGCATAGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RGKEIHSLLLEQSKTMFEMDNSL*YAGIGG Trigger: GCCTCCTATGCCGGCATATCAGAGACTGTTATCCAT...TTCAAACATTGTCTTTGATTGTTCAAGAAGAAGGCTATGGATCTCTTTACCGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR-3UTR GCA 90 bp | GCGGTAAAGAGATCCATAGCCTTCTTCTTGAACAATCAAAGACAATGTTTGAAATTGGTCTTCCTGCTCTaGAGTATGGCAGCCCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AVKRSIAFFLNNQRQCLKLVFLL*SMAALA Trigger: AGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAA...TTTCAAACATTGTCTTTGATTGTTCAAGAAGAAGGCTATGGATCTCTTTACCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR-3UTR GCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTATCTTTTGGTCTTCCTaGTCTGCAGTATGGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVIFWSS*SAVWQP Trigger: GGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGAT...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATCCATATCCCCTACTATGTATGGATTCACCTGGTCACTCTATAAGCTCTATCTTTTGGTCTTCCTaGTCTGCAGTATGGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FNPYPLLCMDSPGHSISSIFWSS*SAVWQP Trigger: GGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGAT...AGAGCTTATAGAGTGACCAGGTGAATCCATACATAGTAGGGGATATGGATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCATGTAGACGTTTCATATaGCAGTATAGCAACATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSCRRFI*QYSNIH Trigger: ATGGATGTTGCTATACTGGCATATGAAACGTCTACA...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCTTTTCCCCACGAGTCCTTGCATCAAGCTGTAAGCGAGTCTTTATAAGCGTTTGTTGCAGTGATTaGAGTAAAACCTGTCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: ICFSPRVLASSCKRVFISVCCSD*SKTCHL Trigger: CAGGTGACAGGTTTTACTGCAATCACTGCAACAAAC...GCTTATAAAGACTCGCTTACAGCTTGATGCAAGGACTCGTGGGGAAAAGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAATAAGCATACACAGCAGCTGTCCAACCATGCATTTGGCTGAGTACTGTAAATCAAGACCTCCAAGCTaGCAAATCAGAGGATACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QISIHSSCPTMHLAEYCKSRPPS*QIRGYS Trigger: ACTGTATCCTCTGATTTGCCAGCTTGGAGGTCTTGA...TTTACAGTACTCAGCCAAATGCATGGTTGGACAGCTGCTGTGTATGCTTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTATTTTCTAAAGTGGACAGCATAAAAACCCAGGTGCAATTAGGGAGAAACTTCCATGGTCCACTGTaGTCTTTTGGTCTTCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLFSKVDSIKTQVQLGRNFHGPL*SFGLPA Trigger: AGCAGGAAGACCAAAAGATCACAGTGGACCATGGAA...GTTTCTCCCTAATTGCACCTGGGTTTTTATGCTGTCCACTTTAGAAAATAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTAATAAGGCTACCAAAAGTGGACAAAGGACCAGGCTGTGTGACCTAACAATTAAACTTCATTGGTaGCAGCAGAGAAAGCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HPNKATKSGQRTRLCDLTIKLHW*QQRKLS Trigger: TGAAAGCTTTCTCTGCTGTCACCAATGAAGTTTAAT...TGTTAGGTCACACAGCCTGGTCCTTTGTCCACTTTTGGTAGCCTTATTAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CAA 90 bp | CATAAAACAGAAACCCTCAATAGCTATAGTAAACACTGTCAACAGTaGTATGTAAGGGAGGAAAGGAGGGTAAAACCCAGAAGCAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: HKTETLNSYSKHCQQ*YVREERRVKPRSNQ Trigger: CTGGTTGCTTCTGGGTTTTACCCTCCTTTCCTCCCTTACATACAACTGTTGACAGTGTTTACTATAGCTATTGAGGGTTTCTGTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCAAAGGTAACGGATCTAAACGTGCCTTTGGTCTCCAAATAGATTGGAATTCCACTGTGATCTTTTaGTCTTCCTGCTCTGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: NSKGNGSKRAFGLQIDWNSTVIF*SSCSAV Trigger: TACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGA...ATTCCAATCTATTTGGAGACCAAAGGCACGTTTAGATCCGTTACCTTTGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTAATAAGGCTACCAAAAGTGGACAAAGGACCAGGCTGTGTGACCTAACAAACCAAAAATGCTCATaGAATCAACACTGTATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HPNKATKSGQRTRLCDLTNQKCS*NQHCIL Trigger: CAGAATACAGTGTTGATTCCATGAGCATTTTTGGTT...TGTTAGGTCACACAGCCTGGTCCTTTGTCCACTTTTGGTAGCCTTATTAGGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | AAATACCGACTGCTACATGTTATCCCTGAAGGACACTTATTGTGGACTTGCTACCCTGCATCACATAATTaGAAAAGGTATGAGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: KYRLLHVIPEGHLLWTCYPASHN*KRYEDA Trigger: AGCATCCTCATACCTTTTCCAATTATGTGATGCAGG...GTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTATTAGGCAGTATCAGTaGCACCTGAAGAGGCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVIRQYQ*HLKRQT Trigger: TGTTTGCCTCTTCAGGTGCCACTGATACTGCCTAAT...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTTATCCCATGACAGCTTaGCAACTCACCATCTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVYPMTA*QLTIWI Trigger: AATCCAGATGGTGAGTTGCCAAGCTGTCATGGGATA...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCACTCCAGAGTCAGAATaGCCAATCTTTACCGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: KHCPFQNVNQSTIVKCTATPESE*PIFTAH Trigger: ATGAGCGGTAAAGATTGGCCATTCTGACTCTGGAGT...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTAATCCATATCCCCTACTATGTATGGATTCACCTGGTCACTCTATAAGCTCTCCAGGGTTTACTCACTaGAAGATTAATGTCGTATGG | + |
|
Preference number: 2 (lower is better) Translates to: FNPYPLLCMDSPGHSISSPGFTH*KINVVW Trigger: CCATACGACATTAATCTTTCAGTGAGTAAACCCTGG...AGAGCTTATAGAGTGACCAGGTGAATCCATACATAGTAGGGGATATGGATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR TCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTGCAAACACTATAGCCTaGGACCTTCTCTACACATTT | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVANTIA*DLLYTF Trigger: AAATGTGTAGAGAAGGTCTCAGGCTATAGTGTTTGC...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTAAGCTGTTCCTTGGCTaGTGGTTTTCATGTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVKLFLG*WFSCHS Trigger: AGAATGACATGAAAACCAGCAGCCAAGGAACAGCTT...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | CTAACAGTAGTACCTGTCACCTGTGACTCTAGCAGTAATACTGCACATCCATACATGTCTGTGCATACATaGTCATCAATTTACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LTVVPVTCDSSSNTAHPYMSVHT*SSIYQS Trigger: ACTTTGGTAAATTGATGAGCATGTATGCACAGACAT...GTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGACAGGTACTACTGTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTATTTTCTAAAGTGGACAGCATAAAAACCCAGGTGCAATTAGGGAGAAACTCTTCACAGAGCAAATaGCGCTGTATTAGGCAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: PLFSKVDSIKTQVQLGRNSSQSK*RCIRQY Trigger: ATACTGCCTAATACAGCGCCATTTGCTCTGTGAAGA...GTTTCTCCCTAATTGCACCTGGGTTTTTATGCTGTCCACTTTAGAAAATAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CAA 90 bp | TCTTATTCAAGACCTCCAAGCTGGCAAATCAGAGGATACAGTATCTaGACTTTAAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: SYSRPPSWQIRGYSI*TLNTVPSKMSISQQ Trigger: TTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTTAAAGTCAAGATACTGTATCCTCTGATTTGCCAGCTTGGAGGTCTTGAATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR TCA 90 bp | AATTCCAAAGGTAACGGATCTAAACGTGCCTTTGGTCTCCAAATAGATTGGAATTTCACAAAGTCATTCTaGAGAGAAAGCCATTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: NSKGNGSKRAFGLQIDWNFTKSF*RESHCT Trigger: TGTGCAATGGCTTTCTCTTCAGAATGACTTTGTGAA...ATTCCAATCTATTTGGAGACCAAAGGCACGTTTAGATCCGTTACCTTTGGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTCAAAAGGCCACAAAGTaGATTCACAAAGTCATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVQKATK*IHKVIL Trigger: CAGAATGACTTTGTGAATGCACTTTGTGGCCTTTTG...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR GCA 90 bp | TTTAATCCATATCCCCTACTATGTATGGATTCACCTGGTCACTCTATAAGCTCTCAAAAGGCCACAAAGTaGATTCACAAAGTCATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FNPYPLLCMDSPGHSISSQKATK*IHKVIL Trigger: CAGAATGACTTTGTGAATGCACTTTGTGGCCTTTTG...AGAGCTTATAGAGTGACCAGGTGAATCCATACATAGTAGGGGATATGGATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAGGAAAAATGTTCACAAATAAGCATACACAGCAGCTGTCCAACCATGCACCAGCATTGCTTGGATaGAATATCTCTGTAATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KTGKMFTNKHTQQLSNHAPALLG*NISVIG Trigger: TCCAATTACAGAGATATTCCATCCAAGCAATGCTGG...TGCATGGTTGGACAGCTGCTGTGTATGCTTATTTGTGAACATTTTTCCTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTATTTTCTAAAGTGGACAGCATAAAAACCCAGGTGCAATTAGGGAGAAACAAAACATCCAGTTACTaGTTACAAGGAAGTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PLFSKVDSIKTQVQLGRNKTSSY*LQGSQG Trigger: ACCTTGACTTCCTTGTAATCAGTAACTGGATGTTTT...GTTTCTCCCTAATTGCACCTGGGTTTTTATGCTGTCCACTTTAGAAAATAAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR TCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTAAAACATCCAGTTACTaGTTACAAGGAAGTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVKTSSY*LQGSQG Trigger: ACCTTGACTTCCTTGTAATCAGTAACTGGATGTTTT...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTGTGACTCTAGCAGTAATACTGCACATCCATACTTATGGAATATTTTGGGCAGCTATTGTTTTATaGAATTACAGGACAACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPVTLAVILHIHTYGIFWAAIVL*NYRTTW Trigger: CCAAGTTGTCCTGTAATTTCATAAAACAATAGCTGC...CCAAAATATTCCATAAGTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR CCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCTCCTTAAGCACACAATaGGAAGTCAGTTTATTGATC | + |
|
Preference number: 2 (lower is better) Translates to: KHCPFQNVNQSTIVKCTASLSTQ*EVSLLI Trigger: GATCAATAAACTGACTTCCCATTGTGTGCTTAAGGA...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR-3UTR CCA 90 bp | TCACCTGTGACTCTAGCAGTAATACTGCACATCCATACTTATGGAATATTTTGGACTGCCAAGGTGATATaGCTGAATCTTTTAATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SPVTLAVILHIHTYGIFWTAKVI*LNLLMH Trigger: ATGCATTAAAAGATTCAGCCATATCACCTTGGCAGT...CCAAAATATTCCATAAGTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR CCA 72 bp | CTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTaGCAGCAAGCACCTCATCTGCTTAGCCACCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPPCEPHSGGQT*QQAPHLLSHLA Trigger: GGCAAGGTGGCTAAGCAGATGAGGTGCTTGCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | CTGCTCTGCAGTATGGCAGCCCTTGCTGCTATCCGTTaGGAAGGTAGACCACCAGTTCGTAGGTGGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LLCSMAALAAIR*EGRPPVRRWPS Trigger: TGATGGCCACCTACGAACTGGTGGTCTACCTTCTCAACGGATAGCAGCAAGGGCTGCCATACTGCAGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR GCA 72 bp | ATGTTGGAAGTCACAGTAAAGAAGGAGAGCGAGCTGTaGATCAGCCGCAGGGGTCCCTATCAGACGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MLEVTVKKESEL*ISRRGPYQTGR Trigger: TCTGCCCGTCTGATAGGGACCCCTGCGGCTGATGCACAGCTCGCTCTCCTTCTTTACTGTGACTTCCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | CCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTaGTCTTTTGGTCTTCCTGCTCTGCAGTATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCWLASRFHGPL*SFGLPALQYGS Trigger: GCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 ENSMUST00000153070.8 |
||
| 3UTR GCA 72 bp | ACTCAGGTGGTCAGACTTGGCAGCAAGCACCTCATCTaGTTAGCCACCTTGCCTGTCCACTACCATCGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQVVRLGSKHLI*LATLPVHYHRF Trigger: AAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTGCTGCCAAGTCTGACCACCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | TCCACTGTGATCTTTTGGTCTTCCTGCTCTGCAGTATaGCAGCCCTTGCTGCTATCCGTTGAGAAGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: STVIFWSSCSAV*QPLLLSVEKVD Trigger: GTCTACCTTCTCAACGGATAGCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR TCA 72 bp | TCCCTATCAGACGGGCAGATTGGACAGAAGAGCATGTaGACTGAGAAATACGAAGGAAGGGCCTTGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSDGQIGQKSM*TEKYEGRALEE Trigger: TTCCTCCAAGGCCCTTCCTTCGTATTTCTCAGTTCACATGCTCTTCTGTCCAATCTGCCCGTCTGATAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | AATTTCAAGCATTTGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTGTCCACTGTGATCTTTaGGTCTTCCTGCTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NFKHLSHRSCCCVRVASSVHCDL*VFLLCS Trigger: ACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGAC...ACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | GCAAATGGCGCTGTATTAGGCAGTATCAGTGGCACCTaGAGAGGCAAACACTATAGCCTGAGACCTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ANGAVLGSISGT*RGKHYSLRPSL Trigger: TAGAGAAGGTCTCAGGCTATAGTGTTTGCCTCTTCAGGTGCCACTGATACTGCCTAATACAGCGCCATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | AATTTCAAGCATTTGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTAACACAAGCTGTTCCTaGGCTGCTGGTTTTCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: NFKHLSHRSCCCVRVASSNTSCS*AAGFHV Trigger: GACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTT...ACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTAATAAGGCTACCAAAAGTGGACAAAGGACCAGGCTGTGTGACCTAACACCAAATTTCAAGCATTaGAGCCACAGGAGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HPNKATKSGQRTRLCDLTPNFKH*SHRSCC Trigger: GCAGCAGCTCCTGTGGCTCAAATGCTTGAAATTTGG...TGTTAGGTCACACAGCCTGGTCCTTTGTCCACTTTTGGTAGCCTTATTAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTAGTGAGTTCACTTTTTaGAGAAGACTGCAACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGSEFTF*RRLQQK Trigger: CTTTTGTTGCAGTCTTCTCAAAAAAGTGAACTCACT...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR GCA 72 bp | CTACATGTTATCCCTGAAGGACACTTATTGTGGACTTaGTACGACAACACAAGCTGTTCCTTGGCTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHVIPEGHLLWT*YDNTSCSLAAG Trigger: ACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR GCA 72 bp | TATCCAAATTTCAAGCATTTGAGCCACAGGAGCTGCTaGTGTGTGAGGGTTGCTTCTAGTAGCTACTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: YPNFKHLSHRSC*CVRVASSSYCS Trigger: AGAGCAGTAGCTACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATTTGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR GCA 72 bp | GATTATCCAAATTTCAAGCATTTGAGCCACAGGAGCTaGTGCTGTGTGAGGGTTGCTTCTAGTAGCTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: DYPNFKHLSHRS*CCVRVASSSYC Trigger: GCAGTAGCTACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATTTGGATAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | CGACTGCTACATGTTATCCCTGAAGGACACTTATTGTaGACTTGCTACGACAACACAAGCTGTTCCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLLHVIPEGHLL*TCYDNTSCSLA Trigger: AGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | AGAGCATGTGAACTGAGAAATACGAAGGAAGGGCCTTaGAGGAAGGGGGACACTGATATCTACCACTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RACELRNTKEGP*RKGDTDIYHLS Trigger: ACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTTCGTATTTCTCAGTTCACATGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | AGTCTGCAAGGAAACTCAAAGGATAATTGGAGGAGTTaGTTTTTCCTCCCACCATGTGAACCCCACTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLQGNSKDNWRS*FFLPPCEPHSG Trigger: ACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCAACTCCTCCAATTATCCTTTGAGTTTCCTTGCAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | CAACCCAGGCAACTTAAAGCACTGTATGGTATCCCATaGCAGCTTGGCAACTCACCATCTGGATTATCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPRQLKALYGIP*QLGNSPSGLSK Trigger: TTTGGATAATCCAGATGGTGAGTTGCCAAGCTGTCATGGGATACCATACAGTGCTTTAAGTTGCCTGGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR GCA 72 bp | GTGGACTTGCTACGACAACACAAGCTGTTCCTTGGCTaGTGGTTTTCATGTCATTCTTCATCATCTGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: VDLLRQHKLFLG*WFSCHSSSSEI Trigger: GATCTCAGATGATGAAGAATGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | AAGTGTCACAGTCTGCAAGGAAACTCAAAGGATAATTaGAGGAGTTGGTTTTTCCTCCCACCATGTGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: KCHSLQGNSKDN*RSWFFLPPCEP Trigger: GGGTTCACATGGTGGGAGGAAAAACCAACTCCTCCAATTATCCTTTGAGTTTCCTTGCAGACTGTGACACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | AAATTCAAGGCTTTGTCTAACATGCATGGCAGCAAATaGCTCCAGAGTCAGAATGGCCAATCTTTACCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KFKALSNMHGSK*LQSQNGQSLPL Trigger: GAGCGGTAAAGATTGGCCATTCTGACTCTGGAGTCATTTGCTGCCATGCATGTTAGACAAAGCCTTGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR CCA 72 bp | GACTTGCTACGACAACACAAGCTGTTCCTTGGCTGCTaGTTTTCATGTCATTCTTCATCATCTGAGATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DLLRQHKLFLGC*FSCHSSSSEIC Trigger: ACAGATCTCAGATGATGAAGAATGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTAATCCATATCCCCTACTATGTATGGATTCACCTGGTCACTCTATAAGCTCTGTCCACTGTGATCTTTaGGTCTTCCTGCTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FNPYPLLCMDSPGHSISSVHCDL*VFLLCS Trigger: ACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGAC...AGAGCTTATAGAGTGACCAGGTGAATCCATACATAGTAGGGGATATGGATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | CGCGGTAAAGAGATCCATAGCCTTCTTCTTGAACAATCAAAGACAATGTTTGAAGTCCACTGTGATCTTTaGGTCTTCCTGCTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGKEIHSLLLEQSKTMFEVHCDL*VFLLCS Trigger: ACTGCAGAGCAGGAAGACCAAAAGATCACAGTGGAC...TTCAAACATTGTCTTTGATTGTTCAAGAAGAAGGCTATGGATCTCTTTACCGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTATTTTCTAAAGTGGACAGCATAAAAACCCAGGTGCAATTAGGGAGAAACCCAAATTTCAAGCATTaGAGCCACAGGAGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLFSKVDSIKTQVQLGRNPNFKH*SHRSCC Trigger: GCAGCAGCTCCTGTGGCTCAAATGCTTGAAATTTGG...GTTTCTCCCTAATTGCACCTGGGTTTTTATGCTGTCCACTTTAGAAAATAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | AAGGTGAGAAATTTAAGAGGGATTAAACTTCATTGGTaGCAGCAGAGAAAGCTTTCAATGGCATGCGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KVRNLRGIKLHW*QQRKLSMACGY Trigger: ATAGCCGCATGCCATTGAAAGCTTTCTCTGCTGTCACCAATGAAGTTTAATCCCTCTTAAATTTCTCACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | TTTACTTGTAAAATACCGACTGCTACATGTTATCCCTaGAGGACACTTATTGTGGACTTGCTACGACAACAC | + |
|
Preference number: 3 (lower is better) Translates to: FTCKIPTATCYP*RTLIVDLLRQH Trigger: GTGTTGTCGTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTTTACAAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR GCA 72 bp | AATGTGTTTTTATGTGAGAGGTCAAGTGTCACAGTCTaGAAGGAAACTCAAAGGATAATTGGAGGAGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NVFLCERSSVTV*KETQRIIGGVG Trigger: ACCAACTCCTCCAATTATCCTTTGAGTTTCCTTGCAGACTGTGACACTTGACCTCTCACATAAAAACACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTAATCCATATCCCCTACTATGTATGGATTCACCTGGTCACTCTATAAGCTCTATCTCCTTAGGAATGTaGGAAGTCACAGTAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FNPYPLLCMDSPGHSISSISLGM*EVTVKK Trigger: CTTCTTTACTGTGACTTCCAACATTCCTAAGGAGAT...AGAGCTTATAGAGTGACCAGGTGAATCCATACATAGTAGGGGATATGGATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGTGTAACAATGTCTGTGCATACATGCTCATCAATTTACCAAAGTCAATCCTAAAATTCAAGGCTTaGTCTAACATGCATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TQCNNVCAYMLINLPKSILKFKA*SNMHGS Trigger: GCTGCCATGCATGTTAGACAAAGCCTTGAATTTTAG...GATTGACTTTGGTAAATTGATGAGCATGTATGCACAGACATTGTTACACTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR CCA 72 bp | ATTATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTaGATCTCCTTAGGAATGTTGGAAGTCACAGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IIVKVCLLYPDV*ISLGMLEVTVK Trigger: CTTTACTGTGACTTCCAACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | ACTGTGAGTGATTGGTATAATTTAATTCACATCCACTaGGGTACATTCAGAAAGGTTAGCATAGCTGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: TVSDWYNLIHIH*GTFRKVSIADQ Trigger: CTGATCAGCTATGCTAACCTTTCTGAATGTACCCCAGTGGATGTGAATTAAATTATACCAATCACTCACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CCA 72 bp | GAGGGTAAAACCCAGAAGCAACCAGCATTGCTTGGATaGAATATCTCTGTAATTGGAAAATGTTTCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EGKTQKQPALLG*NISVIGKCFSK Trigger: TTTACTGAAACATTTTCCAATTACAGAGATATTCCATCCAAGCAATGCTGGTTGCTTCTGGGTTTTACCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR CCA 72 bp | ATCAGCTCTTTTAAAGCTGACTACACTGTGAGTGATTaGTATAATTTAATTCACATCCACTGGGGTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: ISSFKADYTVSD*YNLIHIHWGTF Trigger: GAATGTACCCCAGTGGATGTGAATTAAATTATACCAATCACTCACAGTGTAGTCAGCTTTAAAAGAGCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | AGACTCACTGTTCAGTGCTGTACAAATTGGATGTTTTaGCAGATGAAAAGCATTGAATTCAAAGATCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: RLTVQCCTNWMF*QMKSIEFKDQQ Trigger: CTGTTGATCTTTGAATTCAATGCTTTTCATCTGTCAAAACATCCAATTTGTACAGCACTGAACAGTGAGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR TCA 72 bp | GCAGTCTGTTCTACACACAGCCTAATGCTGGTACAATaGTATCACCATTATAAAATCTTAAGATACACATTT | + |
|
Preference number: 3 (lower is better) Translates to: AVCSTHSLMLVQ*YHHYKILRYTF Trigger: AAATGTGTATCTTAAGATTTTATAATGGTGATATCATTGTACCAGCATTAGGCTGTGTGTAGAACAGACTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR GCA 90 bp | CAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAATCCCCCCGGCAAACAGATaGACCAGCGTGTCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAPHLLSHLACPLPSFLIPPANR*TSVSLW Trigger: CCAGAGGGACACGCTGGTGCATCTGTTTGCCGGGGG...GATTAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR GCA 90 bp | GTTGGTTTTTCCTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTGGCAGCGCAGCTGAAGCCATGTaGACTTGGGTAGAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGFSSHHVNPTQVVRLGSAAEAM*TWVESG Trigger: TCCTGATTCTACCCAAGTGCACATGGCTTCAGCTGC...GCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR CCA 90 bp | ATATGCCGGCATAGGAGGCAGACATGCCCCTATAAAATCCTCGCAGTCCGTCTGCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICRHRRQTCPYKILAVRLHWLQP*CSAELQ Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...CAGACGGACTGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATGCCGGCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| 3UTR CAA 72 bp | TGCATCAGCCGCAGGGGTCCCTATCAGACGGGCAGATaGGACAGAAGAGCATGTGAACTGAGAAATACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CISRRGPYQTGR*DRRACELRNTK Trigger: CTTCGTATTTCTCAGTTCACATGCTCTTCTGTCCAATCTGCCCGTCTGATAGGGACCCCTGCGGCTGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | CTATCCGTTGAGAAGGTAGACCACCAGTTCGTAGGTGGCCATCATAATGGCCGTTTCTGCCATTGCAGCTaGAGCCATGTGCACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSVEKVDHQFVGGHHNGRFCHCS*SHVHLG Trigger: ACCCAAGTGCACATGGCTTCAGCTGCAATGGCAGAA...ACGGCCATTATGATGGCCACCTACGAACTGGTGGTCTACCTTCTCAACGGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR GCA 90 bp | ATATGCCGGCATAGGAGGCAGACATGCCCCTATAAAATCCTCGCAGTCCGTCTGGCAGCTGAAGCCATGTaGACTTGGGTAGAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICRHRRQTCPYKILAVRLAAEAM*TWVESG Trigger: TCCTGATTCTACCCAAGTGCACATGGCTTCAGCTGC...CAGACGGACTGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATGCCGGCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGTTTTTCCTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTGGCAGCCGTGTGGATACGCTATaGTTGTGGCACAGGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGFSSHHVNPTQVVRLGSRVDTL*LWHRFL Trigger: CAAAAACCTGTGCCACAACCATAGCGTATCCACACG...GCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | CACTGTGATCTTTTGGTCTTCCTGCTCTGCAGTATGGCAGCCCTTGCTGCTATCACTGCAGCCGTGTTTTaGCAACTTCCAGTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: HCDLLVFLLCSMAALAAITAAVF*QLPVDM Trigger: CATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGT...GATAGCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTCATAGGAGGCAGACATaGCCCTATAAAATCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGHRRQT*PYKILA Trigger: TGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATG...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTTCCCCACGAGTCCCATaGCTTCTGGAAATAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGSPRVP*LLEIIL Trigger: TAGGATTATTTCCAGAAGCCATGGGACTCGTGGGGA...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035024.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTCGTGTGGATACGCTATaGTTGTGGCACAGGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGRVDTL*LWHRFL Trigger: CAAAAACCTGTGCCACAACCATAGCGTATCCACACG...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CAA 72 bp | ATCTTTTGGTCTTCCTGCTCTGCAGTATGGCAGCCCTaGCTGCTATCCGTTGAGAAGGTAGACCACCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFWSSCSAVWQP*LLSVEKVDHQF Trigger: GAACTGGTGGTCTACCTTCTCAACGGATAGCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAATCATAGCCTTCAGACAATaGAGAGGTCCAGGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: QAPHLLSHLACPLPSFLIIAFRQ*RGPGDT Trigger: AGTGTCCCCTGGACCTCTTCATTGTCTGAAGGCTAT...GATTAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR GCA 90 bp | ACTACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGGTCACAGAAGAAGACTaGAGCCGTGTTTTGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: TTVFCPPCWLASRFHGPLVTEED*SRVLTT Trigger: AGTTGTCAAAACACGGCTGCAGTCTTCTTCTGTGAC...CAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085206.11 ENSMUST00000153070.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTTTTGACAACTTCCAGTaGACATGTCAGAATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGFDNFQ*TCQNSS Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTCAAA...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR CAA 72 bp | ATCCTGAGAAGGGAGGCAGAGACCTGTGAGGCTGTTTaGATTCAGAGTCGTATCACCATGGCGTTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRREAETCEAV*IQSRITMALIS Trigger: GGAAATTAACGCCATGGTGATACGACTCTGAATCAAAACAGCCTCACAGGTCTCTGCCTCCCTTCTCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR TCA 90 bp | CATCCTAATAAGGCTACCAAAAGTGGACAAAGGACCAGGCTGTGTGACCTAACAATGGATAACAGTCTCTaGTATGCCGGCATAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPNKATKSGQRTRLCDLTMDNSL*YAGIGG Trigger: GCCTCCTATGCCGGCATATCAGAGACTGTTATCCAT...TGTTAGGTCACACAGCCTGGTCCTTTGTCCACTTTTGGTAGCCTTATTAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | CAGGTTTTTGAGGTGGCAGCAGCTAGCATCATTCTCACAAAATCCGATGCTTCTATAGCCTTCAGACAATaGAGAGGTCCAGGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: QVFEVAAASIILTKSDASIAFRQ*RGPGDT Trigger: AGTGTCCCCTGGACCTCTTCATTGTCTGAAGGCTAT...AGAAGCATCGGATTTTGTGAGAATGATGCTAGCTGCTGCCACCTCAAAAACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR TCA 90 bp | AAATACCGACTGCTACATGTTATCCCTGAAGGACACTTATTGTGGACTTGCTACACCTGCCATTGCAGCTaGAGCCATGTGCACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYRLLHVIPEGHLLWTCYTCHCS*SHVHLG Trigger: ACCCAAGTGCACATGGCTTCAGCTGCAATGGCAGGT...GTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR GCA 90 bp | CAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAATCCATAGGAGGCAGACATaGCCCTATAAAATCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAPHLLSHLACPLPSFLIHRRQT*PYKILA Trigger: TGCGAGGATTTTATAGGGGCATGTCTGCCTCCTATG...GATTAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR CCA 90 bp | AATTTCAAGCATTTGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTGATACGCTATGGTTGTaGCACAGGTTTTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFKHLSHRSCCCVRVASSDTLWL*HRFLRW Trigger: CCACCTCAAAAACCTGTGCCACAACCATAGCGTATC...ACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CCA 90 bp | TACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTGGAAGCCATGTGCACTTaGGTAGAATCAGGATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YCLLSTMLAGFKIPWSTVEAMCT*VESGSK Trigger: TTTTGATCCTGATTCTACCCAAGTGCACATGGCTTC...CACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085206.11 ENSMUST00000153070.8 |
||
| CDS-3UTR TCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCGGCTGCCATTGCAGCTaGAGCCATGTGCACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KHCPFQNVNQSTIVKCTAGCHCS*SHVHLG Trigger: ACCCAAGTGCACATGGCTTCAGCTGCAATGGCAGCC...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTATCTCACAAAATCCGATaGTTCTTTCACAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQAPHLLSHLACPLPSFLSHKIR*FFHRLL Trigger: GAGGAGTCTGTGAAAGAAGCATCGGATTTTGTGAGA...TAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCACCTCATCTGCTTAGCCACCTTGCCTGTCCACTACCATCGTTTTTAGAAGCCATGTGCACTTaGGTAGAATCAGGATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQAPHLLSHLACPLPSFLEAMCT*VESGSK Trigger: TTTTGATCCTGATTCTACCCAAGTGCACATGGCTTC...TAAAAACGATGGTAGTGGACAGGCAAGGTGGCTAAGCAGATGAGGTGCTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR CAA 72 bp | CTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTaGGAAGTCACAGTAAAGAAGGAGAGCGAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLYPDVWISLGM*EVTVKKESELC Trigger: GCACAGCTCGCTCTCCTTCTTTACTGTGACTTCCAACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | CAAATAAGCATACACAGCAGCTGTCCAACCATGCATTTGGCTGAGTACTGTAAAATAGCCTTCAGACAATaGAGAGGTCCAGGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: QISIHSSCPTMHLAEYCKIAFRQ*RGPGDT Trigger: AGTGTCCCCTGGACCTCTTCATTGTCTGAAGGCTAT...TTTACAGTACTCAGCCAAATGCATGGTTGGACAGCTGCTGTGTATGCTTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAGTTTGTTGCAGTGATTaGAGTAAAACCTGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSVCCSD*SKTCHC Trigger: GCAATGGCAGGTTTTACTGCAATCACTGCAACAAAC...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCACCAAATGGGGTTTGTTaGAGTGATTGCAGTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSPNGVC*SDCSKT Trigger: GGTTTTACTGCAATCACTGCAACAAACCCCATTTGG...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| 3UTR CAA 72 bp | GCAGGCCCTCCTGGGGAAGTGTTACTGAGGATCGACTaGTTATTTTACAGTATTGCAGACGTTCAAGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGEVLLRID*LFYSIADVQVS Trigger: ACTAACTTGAACGTCTGCAATACTGTAAAATAACAAGTCGATCCTCAGTAACACTTCCCCAGGAGGGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTTTGAGGTGGCAGCAGCTAGCATCATTCTCACAAAATCCGATGCTTCTTTTGACAACTTCCAGTaGACATGTCAGAATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVFEVAAASIILTKSDASFDNFQ*TCQNSS Trigger: GGAGCTATTCTGACATGTCCACTGGAAGTTGTCAAA...AGAAGCATCGGATTTTGTGAGAATGATGCTAGCTGCTGCCACCTCAAAAACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAAAGGTAACGGATCTAAACGTGCCTTTGGTCTCCAAATAGATTGGAATCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSKGNGSKRAFGLQIDWNHWLQP*CSAELQ Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...ATTCCAATCTATTTGGAGACCAAAGGCACGTTTAGATCCGTTACCTTTGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTATGGATAACAGTCTCTaGTATGCCGGCATAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVMDNSL*YAGIGG Trigger: GCCTCCTATGCCGGCATATCAGAGACTGTTATCCAT...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | AATTCCAAAGGTAACGGATCTAAACGTGCCTTTGGTCTCCAAATAGATTGGAATACTGCAGCCGTGTTTTaGCAACTTCCAGTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: NSKGNGSKRAFGLQIDWNTAAVF*QLPVDM Trigger: CATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGT...ATTCCAATCTATTTGGAGACCAAAGGCACGTTTAGATCCGTTACCTTTGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR TCA 90 bp | TCACCTGTGACTCTAGCAGTAATACTGCACATCCATACTTATGGAATATTTTGGACTGCAGCCGTGTTTTaGCAACTTCCAGTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: SPVTLAVILHIHTYGIFWTAAVF*QLPVDM Trigger: CATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGT...CCAAAATATTCCATAAGTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124250.3 ENSMUST00000153070.8 |
||
| CDS-3UTR GCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCGCAGCTGAAGCCATGTaGACTTGGGTAGAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHCPFQNVNQSTIVKCTAAAEAM*TWVESG Trigger: TCCTGATTCTACCCAAGTGCACATGGCTTCAGCTGC...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGTAACAATGTCTGTGCATACATGCTCATCAATTTACCAAAGTCAATCCACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQCNNVCAYMLINLPKSIHWLQP*CSAELQ Trigger: CTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTG...GATTGACTTTGGTAAATTGATGAGCATGTATGCACAGACATTGTTACACTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR CAA 72 bp | TTATTGTGGACTTGCTACGACAACACAAGCTGTTCCTaGGCTGCTGGTTTTCATGTCATTCTTCATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLWTCYDNTSCS*AAGFHVILHHL Trigger: CAGATGATGAAGAATGACATGAAAACCAGCAGCCAAGGAACAGCTTGTGTTGTCGTAGCAAGTCCACAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CAA 72 bp | GGAGGAAAGGAGGGTAAAACCCAGAAGCAACCAGCATaGCTTGGATGGAATATCTCTGTAATTGGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GGKEGKTQKQPA*LGWNISVIGKC Trigger: ACATTTTCCAATTACAGAGATATTCCATCCAAGCAATGCTGGTTGCTTCTGGGTTTTACCCTCCTTTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR CCA 90 bp | AATTCCAAAGGTAACGGATCTAAACGTGCCTTTGGTCTCCAAATAGATTGGAATGATACGCTATGGTTGTaGCACAGGTTTTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKGNGSKRAFGLQIDWNDTLWL*HRFLRW Trigger: CCACCTCAAAAACCTGTGCCACAACCATAGCGTATC...ATTCCAATCTATTTGGAGACCAAAGGCACGTTTAGATCCGTTACCTTTGGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| 3UTR CAA 72 bp | AGACCTCCAAGCTGGCAAATCAGAGGATACAGTATCTaGACTTTAAACACTGTCCCTTCCAAAATGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: RPPSWQIRGYSI*TLNTVPSKMSI Trigger: GATTGACATTTTGGAAGGGACAGTGTTTAAAGTCAAGATACTGTATCCTCTGATTTGCCAGCTTGGAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| 3UTR CAA 72 bp | GAAACCCTCAATAGCTATAGTAAACACTGTCAACAGTaGTATGTAAGGGAGGAAAGGAGGGTAAAACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETLNSYSKHCQQ*YVREERRVKPR Trigger: TCTGGGTTTTACCCTCCTTTCCTCCCTTACATACAACTGTTGACAGTGTTTACTATAGCTATTGAGGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCACCTGTGACTCTAGCAGTAATACTGCACATCCATACTTATGGAATATTTGTCACAGAAGAAGACTaGAGCCGTGTTTTGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSPVTLAVILHIHTYGIFVTEED*SRVLTT Trigger: AGTTGTCAAAACACGGCTGCAGTCTTCTTCTGTGAC...AAATATTCCATAAGTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124250.3 ENSMUST00000153070.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTATTTTCTAAAGTGGACAGCATAAAAACCCAGGTGCAATTAGGGAGAAACTCTCACAAAATCCGATaGTTCTTTCACAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFSKVDSIKTQVQLGRNSHKIR*FFHRLL Trigger: GAGGAGTCTGTGAAAGAAGCATCGGATTTTGTGAGA...GTTTCTCCCTAATTGCACCTGGGTTTTTATGCTGTCCACTTTAGAAAATAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR GCA 90 bp | ACACAGTGTAACAATGTCTGTGCATACATGCTCATCAATTTACCAAAGTCAATCGTCACAGAAGAAGACTaGAGCCGTGTTTTGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: TQCNNVCAYMLINLPKSIVTEED*SRVLTT Trigger: AGTTGTCAAAACACGGCTGCAGTCTTCTTCTGTGAC...GATTGACTTTGGTAAATTGATGAGCATGTATGCACAGACATTGTTACACTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR CCA 90 bp | AAACACTGTCCCTTCCAAAATGTCAATCAGTCAACAATTGTAAAATGCACAGCCGAAGCCATGTGCACTTaGGTAGAATCAGGATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHCPFQNVNQSTIVKCTAEAMCT*VESGSK Trigger: TTTTGATCCTGATTCTACCCAAGTGCACATGGCTTC...GGCTGTGCATTTTACAATTGTTGACTGATTGACATTTTGGAAGGGACAGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS TCA 90 bp | AACAACGAGCGAGGGCCCTCTTTTTCCAGGATAGCCTTCAGACAATaGAGAGGTCCAGGGGACACTACTCGGTTCACACTGGCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NNERGPSFSRIAFRQ*RGPGDTTRFTLAPA Trigger: GGCTGGAGCCAGTGTGAACCGAGTAGTGTCCCCTGGACCTCTTCATTGTCTGAAGGCTATCCTGGAAAAAGAGGGCCCTCGCTCGTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085206.11 ENSMUST00000124250.3 ENSMUST00000153070.8 |
||
| CDS CCA 90 bp | CAGTGTCACAGAAGAAGACTGCAGCCGTGTTTTGACAACTTCCAGTaGACATGTCAGAATAGCTCCCACTGTGCCACCACATCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QCHRRRLQPCFDNFQ*TCQNSSHCATTSPG Trigger: GCCGGGGGATGTGGTGGCACAGTGGGAGCTATTCTGACATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTCTTCTTCTGTGACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085206.11 ENSMUST00000153070.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGTAACGCTGGTACTTATAGGCAAAGGCAGGGGAAGCAGGAGTCAGGGTGCCTCACCAGATGAGTaGTTAGACCGCGGTAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPVTLVLIGKGRGSRSQGASPDE*LDRGKE Trigger: CTCTTTACCGCGGTCTAACAACTCATCTGGTGAGGC...ACCCTGACTCCTGCTTCCCCTGCCTTTGCCTATAAGTACCAGCGTTACAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTTTTCCTCCCACCATGTGAACCCCACTCAGGTGGTCAGACTTGGCAGCAAGCAGCAAAGTATATaGCTCTGGAGGGAGCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: VGFSSHHVNPTQVVRLGSKQQSI*LWREQP Trigger: GGGTTGCTCCCTCCAGAGCAATATACTTTGCTGCTT...GCTGCCAAGTCTGACCACCTGAGTGGGGTTCACATGGTGGGAGGAAAAACCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTGTTGTGGCACAGGTTTTaGAGGTGGCAGCAGCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YCLLSTMLAGFKIPWSTVLWHRF*RWQQLA Trigger: TGCTAGCTGCTGCCACCTCAAAAACCTGTGCCACAA...CACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | TCGTGTGGATACGCTATGGTTGTGGCACAGGTTTTTGAGGTGGCAGCAGCTAGCGACTGCAGCCGTGTTTaGACAACTTCCAGTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SCGYAMVVAQVFEVAAASDCSRV*TTSSGH Trigger: ATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTC...GCTAGCTGCTGCCACCTCAAAAACCTGTGCCACAACCATAGCGTATCCACACGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS-3UTR CAA 90 bp | CACTGTGATCTTTTGGTCTTCCTGCTCTGCAGTATGGCAGCCCTTGCTGCTATCAAGCAGCAAAGTATATaGCTCTGGAGGGAGCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: HCDLLVFLLCSMAALAAIKQQSI*LWREQP Trigger: GGGTTGCTCCCTCCAGAGCAATATACTTTGCTGCTT...GATAGCAGCAAGGGCTGCCATACTGCAGAGCAGGAAGACCAAAAGATCACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
||
| CDS CCA 90 bp | GAAGAGGTCCAGGGGACACTACTCGGTTCACACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAGAAATATACAGTGTCACAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEVQGTLLGSHWLQP*CSAELQKYTVSQKK Trigger: CTTCTTCTGTGACACTGTATATTTCTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTGTGAACCGAGTAGTGTCCCCTGGACCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085206.11 ENSMUST00000124250.3 ENSMUST00000153070.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGGCCTTGGAGGAAGGGGGACACTGATATCTACCACTTAAGTTCTTCAGCCTCACCAGATGAGTaGTTAGACCGCGGTAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KEGPWRKGDTDIYHLSSSASPDE*LDRGKE Trigger: CTCTTTACCGCGGTCTAACAACTCATCTGGTGAGGC...TGAAGAACTTAAGTGGTAGATATCAGTGTCCCCCTTCCTCCAAGGCCCTTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | AATTTCAAGCATTTGAGCCACAGGAGCTGCTGCTGTGTGAGGGTTGCTTCTAGTGACTGCAGCCGTGTTTaGACAACTTCCAGTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: NFKHLSHRSCCCVRVASSDCSRV*TTSSGH Trigger: ATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTC...ACTAGAAGCAACCCTCACACAGCAGCAGCTCCTGTGGCTCAAATGCTTGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | AAATACCGACTGCTACATGTTATCCCTGAAGGACACTTATTGTGGACTTGCTACTTGTGGCACAGGTTTTaGAGGTGGCAGCAGCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KYRLLHVIPEGHLLWTCYLWHRF*RWQQLA Trigger: TGCTAGCTGCTGCCACCTCAAAAACCTGTGCCACAA...GTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | CTAACAGTAGTACCTGTCACCTGTGACTCTAGCAGTAATACTGCACATCCATACAAGCAGCAAAGTATATaGCTCTGGAGGGAGCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: LTVVPVTCDSSSNTAHPYKQQSI*LWREQP Trigger: GGGTTGCTCCCTCCAGAGCAATATACTTTGCTGCTT...GTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGACAGGTACTACTGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR CAA 90 bp | ACTACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGAAAAAGACCTATATTTaGTCCCTTCTTCACGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TTVFCPPCWLASRFHGPLKKTYI*SLLHVV Trigger: GACTACGTGAAGAAGGGACAAAATATAGGTCTTTTT...CAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTTCTGTCCACCATGCTGGCTGGCTTCAAGATTCCATGGTCCACTGTGAAAAAGACCTATATTTaGTCCCTTCTTCACGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YCLLSTMLAGFKIPWSTVKKTYI*SLLHVV Trigger: GACTACGTGAAGAAGGGACAAAATATAGGTCTTTTT...CACAGTGGACCATGGAATCTTGAAGCCAGCCAGCATGGTGGACAGAAGACAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGTAACAATGTCTGTGCATACATGCTCATCAATTTACCAAAGTCAATCCAGTCCAGGCTGCCATaGCAGCTGAAGCCATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQCNNVCAYMLINLPKSIQSRLP*QLKPCA Trigger: TGCACATGGCTTCAGCTGCAATGGCAGCCTGGACTG...GATTGACTTTGGTAAATTGATGAGCATGTATGCACAGACATTGTTACACTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTTTCTAAAGTGGACAGCATAAAAACCCAGGTGCAATTAGGGAGAAACGTGGATACGCTATGGTaGTGGCACAGGTTTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLFSKVDSIKTQVQLGRNVDTLW*WHRFLR Trigger: CCTCAAAAACCTGTGCCACAACCATAGCGTATCCAC...GTTTCTCCCTAATTGCACCTGGGTTTTTATGCTGTCCACTTTAGAAAATAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
||
| CDS-3UTR CAA 90 bp | CTGTCACCTGTGACTCTAGCAGTAATACTGCACATCCATACTTATGGAATATTTGACTGCAGCCGTGTTTaGACAACTTCCAGTGGACAT | + |
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Preference number: 5 (lower is better) Translates to: LSPVTLAVILHIHTYGIFDCSRV*TTSSGH Trigger: ATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTC...AAATATTCCATAAGTATGGATGTGCAGTATTACTGCTAGAGTCACAGGTGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124250.3 ENSMUST00000153070.8 |
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| CDS-3UTR CAA 90 bp | ATTCTCACAAAATCCGATGCTTCTTTCACAGACTCCTCATCAGTTTCCATCATATCTTGTGTTCTGCCATaGCAGCTGAAGCCATGTGCA | + |
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Preference number: 5 (lower is better) Translates to: ILTKSDASFTDSSSVSIISCVLP*QLKPCA Trigger: TGCACATGGCTTCAGCTGCAATGGCAGAACACAAGA...TATGATGGAAACTGATGAGGAGTCTGTGAAAGAAGCATCGGATTTTGTGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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| CDS-3UTR CAA 90 bp | AAATACCGACTGCTACATGTTATCCCTGAAGGACACTTATTGTGGACTTGCTACTCCATAGCCTTCTTCTaGAACAATCAAAGACAATGT | + |
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Preference number: 5 (lower is better) Translates to: KYRLLHVIPEGHLLWTCYSIAFF*NNQRQC Trigger: ACATTGTCTTTGATTGTTCAAGAAGAAGGCTATGGA...GTAGCAAGTCCACAATAAGTGTCCTTCAGGGATAACATGTAGCAGTCGGTATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| CDS-3UTR CAA 90 bp | TATAGTAAAGGTCTGTCTTCTTTACCCAGATGTGTGGATCTCCTTAGGAATGTTTCCATAGCCTTCTTCTaGAACAATCAAAGACAATGT | + |
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Preference number: 5 (lower is better) Translates to: YSKGLSSLPRCVDLLRNVSIAFF*NNQRQC Trigger: ACATTGTCTTTGATTGTTCAAGAAGAAGGCTATGGA...AACATTCCTAAGGAGATCCACACATCTGGGTAAAGAAGACAGACCTTTACTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035024.8 ENSMUST00000085206.11 |
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| CDS TCA 72 bp | CGAGGGCCCTCTTTTTCCAGGATAGCCTTCAGACAATaGAGAGGTCCAGGGGACACTACTCGGTTCACACTG | + |
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Preference number: 6 (lower is better) Translates to: RGPSFSRIAFRQ*RGPGDTTRFTL Trigger: CAGTGTGAACCGAGTAGTGTCCCCTGGACCTCTTCATTGTCTGAAGGCTATCCTGGAAAAAGAGGGCCCTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085206.11 ENSMUST00000124250.3 ENSMUST00000153070.8 |
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| CDS CCA 72 bp | AATGAAGAGGTCCAGGGGACACTACTCGGTTCACACTaGCTCCAGCCATGGTGTTCAGCTGAACTTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NEEVQGTLLGSH*LQPWCSAELQK Trigger: TTTCTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTGTGAACCGAGTAGTGTCCCCTGGACCTCTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085206.11 ENSMUST00000124250.3 ENSMUST00000153070.8 |
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| CDS GCA 72 bp | GATGCAGTCCAGGCTGCCATTGCAGCTGAAGCCATGTaGACTTGGGTAGAATCAGGATCAAAAACACCATTC | + |
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Preference number: 6 (lower is better) Translates to: DAVQAAIAAEAM*TWVESGSKTPF Trigger: GAATGGTGTTTTTGATCCTGATTCTACCCAAGTGCACATGGCTTCAGCTGCAATGGCAGCCTGGACTGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| CDS CCA 72 bp | AGAAGAAGACTGCAGCCGTGTTTTGACAACTTCCAGTaGACATGTCAGAATAGCTCCCACTGTGCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: RRRLQPCFDNFQ*TCQNSSHCATT Trigger: TGTGGTGGCACAGTGGGAGCTATTCTGACATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTCTTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085206.11 ENSMUST00000153070.8 |
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| CDS CCA 72 bp | CAGGGGACACTACTCGGTTCACACTGGCTCCAGCCATaGTGTTCAGCTGAACTTCAGAAATATACAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QGTLLGSHWLQP*CSAELQKYTVS Trigger: TGACACTGTATATTTCTGAAGTTCAGCTGAACACCATGGCTGGAGCCAGTGTGAACCGAGTAGTGTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085206.11 ENSMUST00000124250.3 ENSMUST00000153070.8 |
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| CDS CCA 72 bp | GTCCAGGCTGCCATTGCAGCTGAAGCCATGTGCACTTaGGTAGAATCAGGATCAAAAACACCATTCAACTTT | + |
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Preference number: 6 (lower is better) Translates to: VQAAIAAEAMCT*VESGSKTPFNF Trigger: AAAGTTGAATGGTGTTTTTGATCCTGATTCTACCCAAGTGCACATGGCTTCAGCTGCAATGGCAGCCTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124250.3 |
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| CDS CAA 90 bp | ACTTCAGAAATATACAGTGTCACAGAAGAAGACTGCAGCCGTGTTTaGACAACTTCCAGTGGACATGTCAGAATAGCTCCCACTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TSEIYSVTEEDCSRV*TTSSGHVRIAPTVP Trigger: TGGCACAGTGGGAGCTATTCTGACATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTCTTCTTCTGTGACACTGTATATTTCTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085206.11 ENSMUST00000153070.8 |
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| CDS CAA 72 bp | ATATACAGTGTCACAGAAGAAGACTGCAGCCGTGTTTaGACAACTTCCAGTGGACATGTCAGAATAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: IYSVTEEDCSRV*TTSSGHVRIAP Trigger: GGGAGCTATTCTGACATGTCCACTGGAAGTTGTCAAAACACGGCTGCAGTCTTCTTCTGTGACACTGTATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085206.11 ENSMUST00000153070.8 |
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| CDS CCA 72 bp | TTGTGTTCTGCCATTGCAGCTGAAGCCATGTGCACTTaGGTAGAATCAGGATCAAAAACACCATTCAACTTT | + |
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Preference number: 6 (lower is better) Translates to: LCSAIAAEAMCT*VESGSKTPFNF Trigger: AAAGTTGAATGGTGTTTTTGATCCTGATTCTACCCAAGTGCACATGGCTTCAGCTGCAATGGCAGAACACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153070.8 |
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