Pregenerated sensors for SLC25A35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018740Ensembl transcript IDs: ENSMUST00000018884.6, ENSMUST00000102606.10
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCATTGATGTGAGGTaGGAAAGCCAGCCTCCCCGGAGGCCGATCGGGTGGGTTATGGGA | + |
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Preference number: 1 (lower is better) Translates to: GAFSAILPTGAIDVR*ESQPPRRPIGWVMG Trigger: TCCCATAACCCACCCGATCGGCCTCCGGGGAGGCTGGCTTTCTCACCTCACATCAATGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR TCA 90 bp | ACTGTTCGGAGGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCATTaGTGTGAGGTGAGAAAGCCAGCCTCCCCGGAGGCCGATCGGGTG | + |
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Preference number: 1 (lower is better) Translates to: TVRRRLLRHPPYRGH*CEVRKPASPEADRV Trigger: CACCCGATCGGCCTCCGGGGAGGCTGGCTTTCTCACCTCACATCAATGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCCTCCGAACAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 90 bp | ACTGTTCCTCCCATGCCAGGTACCATTTTGAGGACGTTGGCCGGGTaGAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: TVPPMPGTILRTLAG*RGLGLCTCYLCSLS Trigger: AGAGAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 90 bp | GGTACCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTaGACGTGCTATCTGTGCAGCCTCTCTGTTTGGAGAACTTATCCC | + |
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Preference number: 1 (lower is better) Translates to: GTILRTLAGCRGLGL*TCYLCSLSVWRTYP Trigger: GGGATAAGTTCTCCAAACAGAGAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 90 bp | GCTAAAGAAAACCAGCAGGTGAGGGCTATGGCGAATGGGACGCCCTaGAGTCGGGGAGGGATAACTCCAGGTATCCTGGTAAGCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: AKENQQVRAMANGTP*SRGGITPGILVSML Trigger: CAGCATGCTTACCAGGATACCTGGAGTTATCCCTCCCCGACTCCAGGGCGTCCCATTCGCCATAGCCCTCACCTGCTGGTTTTCTTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR TCA 90 bp | TATGGGAAAAAGCCAGAGACAAGAGGGTTCCCTGTCCCTCTCCAGTaGCCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: YGKKPETRGFPVPLQ*PPTGARQPRSFLPS Trigger: GGATGGCAGAAAACTTCTTGGTTGTCTGGCACCGGTCGGAGGTCACTGGAGAGGGACAGGGAACCCTCTTGTCTCTGGCTTTTTCCCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 90 bp | CTCTCCAGTGACCTCCGACCGGTGCCAGACAACCAAGAAGTTTTCTaGCATCCTGTGACCGACCAGAGTCTGATCATAGAACTTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LSSDLRPVPDNQEVF*HPVTDQSLIIELLE Trigger: CTCCAGAAGTTCTATGATCAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTTGGTTGTCTGGCACCGGTCGGAGGTCACTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 90 bp | AGCAGAAATAAGCCACAGGCTTTGGGGGAGGAGGGTCAGGTCTTCTaGGGGATAGGAAGTGTGATCTTGCAAACCTCAAGCCGGACCATT | + |
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Preference number: 1 (lower is better) Translates to: SRNKPQALGEEGQVF*GIGSVILQTSSRTI Trigger: AATGGTCCGGCTTGAGGTTTGCAAGATCACACTTCCTATCCCCCAGAAGACCTGACCCTCCTCCCCCAAAGCCTGTGGCTTATTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 90 bp | CTCTGTTTGGAGAACTTATCCCTGAGAGGCTGCTGTCAGGATGCCTaGTCCCTTTCTGGCAAGCAGCAGGTAGCTAAAGAAAACCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LCLENLSLRGCCQDA*SLSGKQQVAKENQQ Trigger: CTGCTGGTTTTCTTTAGCTACCTGCTGCTTGCCAGAAAGGGACCAGGCATCCTGACAGCAGCCTCTCAGGGATAAGTTCTCCAAACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR TCA 90 bp | TATATCGGGGGATTTGTGGAAAAATTTAAAGCAAGACCCACTCAGTaGCTCAACCCTAGGAGAACAGAGGAGTGGGCGTGGCTGTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: YIGGFVEKFKARPTQ*LNPRRTEEWAWLSP Trigger: GGGGGACAGCCACGCCCACTCCTCTGTTCTCCTAGGGTTGAGTCACTGAGTGGGTCTTGCTTTAAATTTTTCCACAAATCCCCCGATATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| 3UTR TCA 90 bp | ATCGTTGAGACACAACGTGCTACTGAGGACTCGGGGACCCAGTTCTaGGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGATGTAAACATA | + |
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Preference number: 1 (lower is better) Translates to: IVETQRATEDSGTQF*EGEFLSASSLDVNI Trigger: TATGTTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCCGAGTCCTCAGTAGCACGTTGTGTCTCAACGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR TCA 90 bp | GGGCGGTCTCAAGTGACCTTCTTAGAAGGTATAACTCCTTTACAATaGAGGAGCAAGTGGGCACGAGGGATTAACCCATCACTAGCATCA | + |
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Preference number: 1 (lower is better) Translates to: GRSQVTFLEGITPLQ*RSKWARGINPSLAS Trigger: TGATGCTAGTGATGGGTTAATCCCTCGTGCCCACTTGCTCCTTCATTGTAAAGGAGTTATACCTTCTAAGAAGGTCACTTGAGACCGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 90 bp | TGTCACAGCAGGTCTCTTGGCCCTGAAAATCTGTCATGTCCACCTTaGAGCCTGAGTAACTTTGAACAGCTGGTAACTAGTTTGACTCTT | + |
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Preference number: 1 (lower is better) Translates to: CHSRSLGPENLSCPP*SLSNFEQLVTSLTL Trigger: AAGAGTCAAACTAGTTACCAGCTGTTCAAAGTTACTCAGGCTCCAAGGTGGACATGACAGATTTTCAGGGCCAAGAGACCTGCTGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTGAGAAAGCTAGCCAACGGGAGCAAAGGATGTCACACTaGATCAGGCCTTGCTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: RPTCRAKRLRGEKASQREQRMSH*IRPCCG Trigger: GCCGCAGCAAGGCCTGATGCAGTGTGACATCCTTTG...CTCCCGTTGGCTAGCTTTCTCACCGCGCAGCCGCTTCGCCCTGCACGTGGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTGAGAAAGCTAGCCAACGGGAGGCAAGACCCACTCAGTaGCTCAACCCTAGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: RPTCRAKRLRGEKASQREARPTQ*LNPRRT Trigger: TGTTCTCCTAGGGTTGAGTCACTGAGTGGGTCTTGC...CTCCCGTTGGCTAGCTTTCTCACCGCGCAGCCGCTTCGCCCTGCACGTGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CAA 90 bp | GACATGCTCCTCCTTACCACTGTTCCTCCCATGCCAGGTACCATTTaGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGC | + |
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Preference number: 2 (lower is better) Translates to: DMLLLTTVPPMPGTI*RTLAGCRGLGLCTC Trigger: GCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGTGGTAAGGAGGAGCATGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR GCA 90 bp | GAAACTGTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCAAGGCCTTGCTGCGGCTaGCCCAGTATCAGACTGATC | + |
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Preference number: 2 (lower is better) Translates to: ETVHCSEAPSPPSSLQGPRPCCG*PSIRLI Trigger: GATCAGTCTGATACTGGGGCAGCCGCAGCAAGGCCT...TGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCCTCCGAACAGTGGACAGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR GCA 90 bp | GAAACTGTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCATGCATCAGGCCTTGCTaGGGCTGCCCCAGTATCAGA | + |
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Preference number: 2 (lower is better) Translates to: ETVHCSEAPSPPSSLQGPCIRPC*GCPSIR Trigger: TCTGATACTGGGGCAGCCGCAGCAAGGCCTGATGCA...TGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCCTCCGAACAGTGGACAGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CAA 90 bp | CTCCTTACCACTGTTCCTCCCATGCCAGGTACCATTTTGAGGACGTaGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LLTTVPPMPGTILRT*AGCRGLGLCTCYLC Trigger: GCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGTGGTAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CCA 90 bp | CGGGAGCCGAGAAAGTGGGCGGGGTCTGTGGCTGGACGGTTATTCAGGACGAAAGACCAGGCTCGAGGGTaGGGCTGGGTTATTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: REPRKWAGSVAGRLFRTKDQARG*GWVIQT Trigger: TGTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTC...TTTCGTCCTGAATAACCGTCCAGCCACAGACCCCGCCCACTTTCTCGGCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CAA 90 bp | CAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTaGGAGAACTTATCCCTGAGAGGCTGCTGTCAGGATGCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: QGARAVHVLSVQPLC*ENLSLRGCCQDAWS Trigger: GGACCAGGCATCCTGACAGCAGCCTCTCAGGGATAAGTTCTCCAAACAGAGAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR TCA 90 bp | ATCAGCCCCCGTAAGGACGAAAGAGCGGGTGGGAACCTCCCAATTGGGTCCCCAGTCCACCTTGGAGCCTaGGTAACTTTGAACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ISPRKDERAGGNLPIGSPVHLGA*VTLNSW Trigger: CCAGCTGTTCAAAGTTACTCAGGCTCCAAGGTGGAC...TGGGGACCCAATTGGGAGGTTCCCACCCGCTCTTTCGTCCTTACGGGGGCTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CCA 90 bp | ACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCCTGTCATGTCCACCTTaGAGCCTGAGTAACTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: TLAGCRGLGLCTCYLCSLLSCPP*SLSNFE Trigger: TTCAAAGTTACTCAGGCTCCAAGGTGGACATGACAG...GAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGCAATAGCAGACCAGGCTCGAGGGTGGGGCTGGGTTATTCAGACATGCCAGGTCTCTTGGCCCTaGAAATCTGTCATGTCCACC | + |
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Preference number: 2 (lower is better) Translates to: PRAIADQARGWGWVIQTCQVSWP*KSVMST Trigger: GGTGGACATGACAGATTTTCAGGGCCAAGAGACCTG...GCATGTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTCTGCTATTGCCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR GCA 90 bp | AGACCCCAGCGGTCCTGGGTCTTTCCAAAGAGCCGGGCTTCAGAGACTAGCCCCAACCAAGAAGTTTTCTaGCATCCTGTGACCGACCAG | + |
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Preference number: 2 (lower is better) Translates to: RPQRSWVFPKSRASETSPNQEVF*HPVTDQ Trigger: CTGGTCGGTCACAGGATGGCAGAAAACTTCTTGGTT...GGGGCTAGTCTCTGAAGCCCGGCTCTTTGGAAAGACCCAGGACCGCTGGGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR TCA 90 bp | TACCATTTTGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTAGCCCCAGTATCAGACTaGTCTTTTGCTCACCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: YHFEDVGRVQGARAVHVLAPVSD*SFAHLQ Trigger: TTGAAGGTGAGCAAAAGATCAGTCTGATACTGGGGC...TAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGAACTTATCCCTGAGAGGCTGCTGTCAGGATGCCTGGTCCCTTTCTGGCAAATAAGCCACAGGCTTTaGGGGAGGAGGGTCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GELIPERLLSGCLVPFWQISHRL*GRRVRS Trigger: AGACCTGACCCTCCTCCCCCAAAGCCTGTGGCTTAT...TTGCCAGAAAGGGACCAGGCATCCTGACAGCAGCCTCTCAGGGATAAGTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGCAAAGCAGACCCCAGCGGTCCTGGGTCTTTCCAAAGAGCCGGGCTTCAGACGATCGGGTGGGTTATaGGAAAAAGCCAGAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: TAKQTPAVLGLSKEPGFRRSGGL*EKARDK Trigger: CTTGTCTCTGGCTTTTTCCCATAACCCACCCGATCG...TCTGAAGCCCGGCTCTTTGGAAAGACCCAGGACCGCTGGGGTCTGCTTTGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTGAGAAAGCTAGCCAACGGGAGATATCGGGGGATTTGTaGAAAAATTTAAAGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RPTCRAKRLRGEKASQREISGDL*KNLKQD Trigger: GTCTTGCTTTAAATTTTTCCACAAATCCCCCGATAT...CTCCCGTTGGCTAGCTTTCTCACCGCGCAGCCGCTTCGCCCTGCACGTGGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGGCAATAGCAGACCAGGCTCGAGGGTGGGGCTGGGTTATTCAGACATGCGGGGGAGTTTCTTTCTaGTTCTTCCCTGGATGTAAA | + |
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Preference number: 2 (lower is better) Translates to: PRAIADQARGWGWVIQTCGGVSF*FFPGCK Trigger: TTTACATCCAGGGAAGAAGCAGAAAGAAACTCCCCC...GCATGTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTCTGCTATTGCCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR GCA 90 bp | GTGCCAGACAACCAAGAAGTTTTCTGCCATCCTGTGACCGACCAGAGTCTGATCTGGGTTATTCAGACATaGTCCTCCTTACCACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VPDNQEVFCHPVTDQSLIWVIQT*SSLPLF Trigger: GAACAGTGGTAAGGAGGAGCATGTCTGAATAACCCA...GATCAGACTCTGGTCGGTCACAGGATGGCAGAAAACTTCTTGGTTGTCTGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR TCA 90 bp | GGGAACCCAAGAATGGCAGTAGAAATATACTTTGGAGTGACTGATTCAACCCTGGCAAGACCCACTCAGTaGCTCAACCCTAGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: GNPRMAVEIYFGVTDSTLARPTQ*LNPRRT Trigger: TGTTCTCCTAGGGTTGAGTCACTGAGTGGGTCTTGC...CAGGGTTGAATCAGTCACTCCAAAGTATATTTCTACTGCCATTCTTGGGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTATGAAATATATCGGGGGATTTGTGGAAAAATTTAAAGCAAGACCCACTGTGCCCAAAGAGTGTTaGTCTGGAGTTACAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: MGMKYIGGFVEKFKARPTVPKEC*SGVTRE Trigger: CTCTCTTGTAACTCCAGATCAACACTCTTTGGGCAC...AGTGGGTCTTGCTTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| 3UTR-3UTR CCA 90 bp | AACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCATATCGGGGGATTTGTaGAAAAATTTAAAGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: NIISVPSNLRGHLGLPVPISGDL*KNLKQD Trigger: GTCTTGCTTTAAATTTTTCCACAAATCCCCCGATAT...GGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| 3UTR TCA 72 bp | TCCGCCATCCTCCCTACAGGGGCCATTGATGTGAGGTaGGAAAGCCAGCCTCCCCGGAGGCCGATCGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SAILPTGAIDVR*ESQPPRRPIGW Trigger: CCACCCGATCGGCCTCCGGGGAGGCTGGCTTTCTCACCTCACATCAATGGCCCCTGTAGGGAGGATGGCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR TCA 72 bp | AGGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCATTaGTGTGAGGTGAGAAAGCCAGCCTCCCCGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RRLLRHPPYRGH*CEVRKPASPEA Trigger: GGCCTCCGGGGAGGCTGGCTTTCTCACCTCACATCAATGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CAA 90 bp | TGCAGGCCCACGTGCAGGGCGAAGCGGCTGCGCGGTGAGAAAGCTAGCCAACGGAATAAGCCACAGGCTTaGGGGGAGGAGGGTCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: CRPTCRAKRLRGEKASQRNKPQA*GEEGQV Trigger: GACCTGACCCTCCTCCCCCAAAGCCTGTGGCTTATT...CCGTTGGCTAGCTTTCTCACCGCGCAGCCGCTTCGCCCTGCACGTGGGCCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 72 bp | CCCATGCCAGGTACCATTTTGAGGACGTTGGCCGGGTaGAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: PMPGTILRTLAG*RGLGLCTCYLC Trigger: GCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACCTGGCATGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 72 bp | AGGCCGGGAGCCGAGAAAGTGGGCGGGGTCTGTGGCTaGACGGTTATTCAGGACGAAAACTCCCAAGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RPGAEKVGGVCG*TVIQDENSQGQ Trigger: TTGCCCTTGGGAGTTTTCGTCCTGAATAACCGTCCAGCCACAGACCCCGCCCACTTTCTCGGCTCCCGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 72 bp | AAAGCCAGCCTCCCCGGAGGCCGATCGGGTGGGTTATaGGAAAAAGCCAGAGACAAGAGGGTTCCCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: KASLPGGRSGGL*EKARDKRVPCP Trigger: GGGACAGGGAACCCTCTTGTCTCTGGCTTTTTCCCATAACCCACCCGATCGGCCTCCGGGGAGGCTGGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCAAGGGCAATAGCAGACCAGGCTCGAGGGTGGGGCTGGGTTATTCAGACATGCCAGGTACCATTTaGAGGACGTTGGCCGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: TPKGNSRPGSRVGLGYSDMPGTI*RTLAGC Trigger: GCACCCGGCCAACGTCCTCAAAATGGTACCTGGCAT...GTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTCTGCTATTGCCCTTGGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR-3UTR CAA 90 bp | ACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTATCAGACTGATCTTTaGCTCACCTTCAATCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: TLAGCRGLGLCTCYLCSLYQTDL*LTFNQP Trigger: GGGCTGATTGAAGGTGAGCAAAAGATCAGTCTGATA...GAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 72 bp | ACGTTGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTaGTATCTGTGCAGCCTCTCTGTTTGGAGAACTTAT | + |
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Preference number: 3 (lower is better) Translates to: TLAGCRGLGLCT*YLCSLSVWRTY Trigger: ATAAGTTCTCCAAACAGAGAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 72 bp | GACCAGGCTCGAGGGTGGGGCTGGGTTATTCAGACATaGTCCTCCTTACCACTGTTCCTCCCATGCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: DQARGWGWVIQT*SSLPLFLPCQV Trigger: TACCTGGCATGGGAGGAACAGTGGTAAGGAGGAGCATGTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 72 bp | CCAAGGGCAATAGCAGACCAGGCTCGAGGGTGGGGCTaGGTTATTCAGACATGCTCCTCCTTACCACTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PRAIADQARGWG*VIQTCSSLPLF Trigger: GAACAGTGGTAAGGAGGAGCATGTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTCTGCTATTGCCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR TCA 72 bp | AAGCCAGAGACAAGAGGGTTCCCTGTCCCTCTCCAGTaGCCTCCGACCGGTGCCAGACAACCAAGAAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KPETRGFPVPLQ*PPTGARQPRSF Trigger: AAAACTTCTTGGTTGTCTGGCACCGGTCGGAGGTCACTGGAGAGGGACAGGGAACCCTCTTGTCTCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR GCA 72 bp | CAGCCTCTCTGTTTGGAGAACTTATCCCTGAGAGGCTaGTGTCAGGATGCCTGGTCCCTTTCTGGCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QPLCLENLSLRG*CQDAWSLSGKQ Trigger: CTGCTTGCCAGAAAGGGACCAGGCATCCTGACAGCAGCCTCTCAGGGATAAGTTCTCCAAACAGAGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| 3UTR CCA 72 bp | ACTCAAGTACAACTGCAAAGCAGACCCCAGCGGTCCTaGGTCTTTCCAAAGAGCCGGGCTTCAGAGACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TQVQLQSRPQRS*VFPKSRASETS Trigger: GCTAGTCTCTGAAGCCCGGCTCTTTGGAAAGACCCAGGACCGCTGGGGTCTGCTTTGCAGTTGTACTTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR TCA 72 bp | ACACAACGTGCTACTGAGGACTCGGGGACCCAGTTCTaGGAGGGGGAGTTTCTTTCTGCTTCTTCCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TQRATEDSGTQF*EGEFLSASSLD Trigger: ATCCAGGGAAGAAGCAGAAAGAAACTCCCCCTCTCAGAACTGGGTCCCCGAGTCCTCAGTAGCACGTTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR GCA 72 bp | CAAAGGATGTCACACTGCATCAGGCCTTGCTGCGGCTaGCCCAGTATCAGACTGATCTTTTGCTCACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QRMSHCIRPCCG*PSIRLIFCSPS Trigger: TGAAGGTGAGCAAAAGATCAGTCTGATACTGGGGCAGCCGCAGCAAGGCCTGATGCAGTGTGACATCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR GCA 72 bp | ATCACTAGCATCACCAACCCTAAACTCAAGTACAACTaGAAAGCAGACCCCAGCGGTCCTGGGTCTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ITSITNPKLKYN*KADPSGPGSFQ Trigger: TTGGAAAGACCCAGGACCGCTGGGGTCTGCTTTGCAGTTGTACTTGAGTTTAGGGTTGGTGATGCTAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR CCA 72 bp | AACCTCGCTAATGTCCAGACTCAAGTACTAGATCTATaGAGCCCAACAGAAACTGTCCACTGTTCGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: NLANVQTQVLDL*SPTETVHCSEA Trigger: CGCCTCCGAACAGTGGACAGTTTCTGTTGGGCTCCATAGATCTAGTACTTGAGTCTGGACATTAGCGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTTCCTTCTCCCTCTATTCCCTTACCCTAAGGTGTCACAGCAGGTCTCTATGATCCCAACCTCTTaGGTCCCCAGTAAAGATCGT | + |
|
Preference number: 3 (lower is better) Translates to: TIFLLPLFPYPKVSQQVSMIPTS*VPSKDR Trigger: ACGATCTTTACTGGGGACCAAAGAGGTTGGGATCAT...AGAGACCTGCTGTGACACCTTAGGGTAAGGGAATAGAGGGAGAAGGAAAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR TCA 72 bp | CAAGTGACCTTCTTAGAAGGTATAACTCCTTTACAATaGAGGAGCAAGTGGGCACGAGGGATTAACCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QVTFLEGITPLQ*RSKWARGINPS Trigger: TGATGGGTTAATCCCTCGTGCCCACTTGCTCCTTCATTGTAAAGGAGTTATACCTTCTAAGAAGGTCACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR TCA 72 bp | CCCAAGAATGGCAGTAGAAATATACTTTGGAGTGACTaGTTCAACCCTGAGATGGGTATGAAATATATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PKNGSRNILWSD*FNPEMGMKYIG Trigger: CCCGATATATTTCATACCCATCTCAGGGTTGAATCAGTCACTCCAAAGTATATTTCTACTGCCATTCTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| 3UTR TCA 72 bp | TACTTTGGAGTGACTGATTCAACCCTGAGATGGGTATaGAATATATCGGGGGATTTGTGGAAAAATTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YFGVTDSTLRWV*NISGDLWKNLK Trigger: CTTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCATCTCAGGGTTGAATCAGTCACTCCAAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | AGACCCCAGCGGTCCTGGGTCTTTCCAAAGAGCCGGGCTTCAGAGACTAGCCCCCTGCCAGCCCGTAGGTaGCCAGTCGGATGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPQRSWVFPKSRASETSPLPARR*PVGCHS Trigger: TGAATGGCATCCGACTGGGCACCTACGGGCTGGCAG...GGGGCTAGTCTCTGAAGCCCGGCTCTTTGGAAAGACCCAGGACCGCTGGGGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR CCA 90 bp | AGGAGAACAGAGGAGTGGGCGTGGCTGTCCCCCTTAGGGGCATTGAGAGGTCAAGCGCTGGTAGGTGCCTaGGGCCTGCAGTTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRTEEWAWLSPLGALRGQALVGA*GLQFSL Trigger: CAGGGAGAACTGCAGGCCCCAGGCACCTACCAGCGC...TTGACCTCTCAATGCCCCTAAGGGGGACAGCCACGCCCACTCCTCTGTTCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| 3UTR CAA 72 bp | ACTGTTCCTCCCATGCCAGGTACCATTTTGAGGACGTaGGCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVPPMPGTILRT*AGCRGLGLCTC Trigger: GCACGTGCACAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR CAA 72 bp | CTCCTTACCACTGTTCCTCCCATGCCAGGTACCATTTaGAGGACGTTGGCCGGGTGCAGGGGGCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTVPPMPGTI*RTLAGCRGLGL Trigger: CAGCCCTAGCCCCCTGCACCCGGCCAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGTGGTAAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCTGGGTTATTCAGACATGCTCCTCCTTACCACTGTTCCTCCCATGCCCCAGATATGCTCCCATaGCCCCAGCAAGGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGAGLFRHAPPYHCSSHAPDMLP*PQQGPQ Trigger: CTGGGGCCCTTGCTGGGGTCATGGGAGCATATCTGG...GGCATGGGAGGAACAGTGGTAAGGAGGAGCATGTCTGAATAACCCAGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR TCA 90 bp | GCCGGGTGCAGGGGGCTAGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTGAGGTCCTTGATAGATaGGAAGGTGCACAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGCRGLGLCTCYLCSLSVEVLDR*EGAQLG Trigger: ACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTC...AACAGAGAGGCTGCACAGATAGCACGTGCACAGCCCTAGCCCCCTGCACCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAAGCAGACCCCAGCGGTCCTGGGTCTTTCCAAAGAGCCGGGCTTCAGAAGATCCCCCGGTACATaGGGCCCTTGCCTCGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TAKQTPAVLGLSKEPGFRRSPGT*GPCLEY Trigger: ATACTCGAGGCAAGGGCCTCATGTACCGGGGGATCT...TCTGAAGCCCGGCTCTTTGGAAAGACCCAGGACCGCTGGGGTCTGCTTTGCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR TCA 90 bp | AGGAGAACAGAGGAGTGGGCGTGGCTGTCCCCCTTAGGGGCATTGAGAGGTCAAAGATCCCCCGGTACATaGGGCCCTTGCCTCGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RRTEEWAWLSPLGALRGQRSPGT*GPCLEY Trigger: ATACTCGAGGCAAGGGCCTCATGTACCGGGGGATCT...TTGACCTCTCAATGCCCCTAAGGGGGACAGCCACGCCCACTCCTCTGTTCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | GTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCATTGATGAGGTGCCCAGTCGGATaGCATTCATCAAGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHCSEAPSPPSSLQGPLMRCPVG*HSSRTG Trigger: ACCAGTTCTTGATGAATGGCATCCGACTGGGCACCT...CATCAATGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCCTCCGAACAGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR GCA 90 bp | CTGATTCTGATCCCTTTAGGTAGCAAAGGATGTCACACTGCATCAGGCCTTGCTGGGCCCAGGCCCTTCTaGAGGGCAGCTAGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LILIPLGSKGCHTASGLAGPRPF*RAARPS Trigger: GGATGGCCTAGCTGCCCTGCAGAAGGGCCTGGGCCC...AGCAAGGCCTGATGCAGTGTGACATCCTTTGCTACCTAAAGGGATCAGAATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTTAGGGGCATTGAGAGGTCAATCTGTCAGCAGTCACTGTGATAGGAAGCTGCCAGCCCGTAGGTaGCCAGTCGGATGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLGALRGQSVSSHCDRKLPARR*PVGCHS Trigger: TGAATGGCATCCGACTGGGCACCTACGGGCTGGCAG...CTTCCTATCACAGTGACTGCTGACAGATTGACCTCTCAATGCCCCTAAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCTGGGTTATTCAGACATGCTCCTCCTTACCACTGTTCCTCCCATGCCATCTCGGTTAGTGCCTaGTGCTTATACTGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGAGLFRHAPPYHCSSHAISVSA*CLYWCP Trigger: AGGGCACCAGTATAAGCATCAGGCACTAACCGAGAT...GGCATGGGAGGAACAGTGGTAAGGAGGAGCATGTCTGAATAACCCAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCTCCTTACCACTGTTCCTCCCATGCCAGGTACCATTTTGAGGACGTTGTCTGTCCGCGCTGTCTaGAGCAGAGCGTCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: MLLLTTVPPMPGTILRTLSVRAV*SRASKI Trigger: GATCTTGGACGCTCTGCTGCAGACAGCGCGGACAGA...CAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGTGGTAAGGAGGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR CCA 90 bp | ACCATTTTCCTTCTCCCTCTATTCCCTTACCCTAAGGTGTCACAGCAGGTCTCTCGACACCACTCACCATaGCAGCGGCCAGAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TIFLLPLFPYPKVSQQVSRHHSP*QRPEPP Trigger: AGGTGGCTCTGGCCGCTGCCATGGTGAGTGGTGTCG...AGAGACCTGCTGTGACACCTTAGGGTAAGGGAATAGAGGGAGAAGGAAAATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR CAA 72 bp | AGGGCTGTGCACGTGCTATCTGTGCAGCCTCTCTGTTaGGAGAACTTATCCCTGAGAGGCTGCTGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVHVLSVQPLC*ENLSLRGCCQD Trigger: ATCCTGACAGCAGCCTCTCAGGGATAAGTTCTCCAAACAGAGAGGCTGCACAGATAGCACGTGCACAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR TCA 90 bp | AACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCCCAGATATGCTCCCATaGCCCCAGCAAGGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NIISVPSNLRGHLGLPVPPDMLP*PQQGPQ Trigger: CTGGGGCCCTTGCTGGGGTCATGGGAGCATATCTGG...GGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | CCAAGGGCAATAGCAGACCAGGCTCGAGGGTGGGGCTGGGTTATTCAGACATGCAGTTCTCCCTGCAATTaGATTCTGGTCTTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: PRAIADQARGWGWVIQTCSSPCN*ILVFTT Trigger: GGTTGTGAAGACCAGAATGCAATTGCAGGGAGAACT...GCATGTCTGAATAACCCAGCCCCACCCTCGAGCCTGGTCTGCTATTGCCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| 3UTR CAA 72 bp | GAGGGTCAGGTCTTCTGGGGGATAGGAAGTGTGATCTaGCAAACCTCAAGCCGGACCATTTTCCTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGQVFWGIGSVI*QTSSRTIFLLP Trigger: AGGGAGAAGGAAAATGGTCCGGCTTGAGGTTTGCAAGATCACACTTCCTATCCCCCAGAAGACCTGACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGCGCTGGTAGGTGCCTaGGGCCTGCAGTTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKNIISVPSNLRGHLGLPALVGA*GLQFSL Trigger: CAGGGAGAACTGCAGGCCCCAGGCACCTACCAGCGC...TGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTTCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAAGCAGCAGGTAGCTAAAGAAAACCAGCAGGTGAGGGCTATGGCGAATCCATTCATCAAGAACTaGTACAAGAGCGCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGKQQVAKENQQVRAMANPFIKN*YKSAGP Trigger: GGGCCCTGCGCTCTTGTACCAGTTCTTGATGAATGG...ATTCGCCATAGCCCTCACCTGCTGGTTTTCTTTAGCTACCTGCTGCTTGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR CCA 90 bp | CGGGAGCCGAGAAAGTGGGCGGGGTCTGTGGCTGGACGGTTATTCAGGACGAAATATAAAGTCTTGTGCTaGCTACATCAAAGGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: REPRKWAGSVAGRLFRTKYKVLC*LHQRVS Trigger: TGACACCCTTTGATGTAGCCAGCACAAGACTTTATA...TTTCGTCCTGAATAACCGTCCAGCCACAGACCCCGCCCACTTTCTCGGCTCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR GCA 90 bp | AGTAGAGGCAGAGGTGCCCAAAGAGTGTTGATCTGGAGTTACAAGAGAGTGATTTCTGTCCGCGCTGTCTaGAGCAGAGCGTCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRGRGAQRVLIWSYKRVISVRAV*SRASKI Trigger: GATCTTGGACGCTCTGCTGCAGACAGCGCGGACAGA...AATCACTCTCTTGTAACTCCAGATCAACACTCTTTGGGCACCTCTGCCTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | AATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCTTTGGGAGAAGGTGCACAGCTaGGTAGAGGAGCCGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: NFCAFKSKRTPGSPSSLWEKVHS*VEEPMT Trigger: TGTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTC...CCAAAGGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGAACAGAGGAGTGGGCGTGGCTGTCCCCCTTAGGGGCATTGAGAGGTCAATATAAAGTCTTGTGCTaGCTACATCAAAGGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRTEEWAWLSPLGALRGQYKVLC*LHQRVS Trigger: TGACACCCTTTGATGTAGCCAGCACAAGACTTTATA...TTGACCTCTCAATGCCCCTAAGGGGGACAGCCACGCCCACTCCTCTGTTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | GTCAAATTCCTTCAAGGAAGCAGAAATAAGCCACAGGCTTTGGGGGAGGAGGGTGCCTGCAGTTCTCCCTaGAATTGCATTCTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKFLQGSRNKPQALGEEGACSSP*NCILVF Trigger: GAAGACCAGAATGCAATTGCAGGGAGAACTGCAGGC...ACCCTCCTCCCCCAAAGCCTGTGGCTTATTTCTGCTTCCTTGAAGGAATTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR CCA 90 bp | AACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCCTGCGGACAGGACTGTaGGTGCCTTCATTAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NIISVPSNLRGHLGLPVPLRTGL*VPSLVC Trigger: GCACACTAATGAAGGCACCCACAGTCCTGTCCGCAG...GGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | GAGGTCAATCTGTCAGCAGTCACTGTGATAGGAAGTAGAGGCAGAGGTGCCCAACTTCACCATGTAGATTaGGCTTCCCAGATATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVNLSAVTVIGSRGRGAQLHHVD*ASQICS Trigger: GGAGCATATCTGGGAAGCCCAATCTACATGGTGAAG...TTGGGCACCTCTGCCTCTACTTCCTATCACAGTGACTGCTGACAGATTGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTGATAGGAAGTAGAGGCAGAGGTGCCCAAAGAGTGTTGATCTGGAGTTACGCCTGCAGTTCTCCCTaGAATTGCATTCTGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVIGSRGRGAQRVLIWSYACSSP*NCILVF Trigger: GAAGACCAGAATGCAATTGCAGGGAGAACTGCAGGC...GTAACTCCAGATCAACACTCTTTGGGCACCTCTGCCTCTACTTCCTATCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR TCA 90 bp | GGGAACCCAAGAATGGCAGTAGAAATATACTTTGGAGTGACTGATTCAACCCTGGAGGTCCTTGATAGATaGGAAGGTGCACAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNPRMAVEIYFGVTDSTLEVLDR*EGAQLG Trigger: ACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTC...CAGGGTTGAATCAGTCACTCCAAAGTATATTTCTACTGCCATTCTTGGGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTGATAGGAAGTAGAGGCAGAGGTGCCCAAAGAGTGTTGATCTGGAGTTACACTAGACCATGTTTCTaGCCAATCTCGGTTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVIGSRGRGAQRVLIWSYTRPCF*PISVSA Trigger: GGCACTAACCGAGATTGGCCAGAAACATGGTCTAGT...GTAACTCCAGATCAACACTCTTTGGGCACCTCTGCCTCTACTTCCTATCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | AATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCTTTGGACTAGACCATGTTTCTaGCCAATCTCGGTTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFCAFKSKRTPGSPSSLWTRPCF*PISVSA Trigger: GGCACTAACCGAGATTGGCCAGAAACATGGTCTAGT...CCAAAGGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTGATAGGAAGTAGAGGCAGAGGTGCCCAAAGAGTGTTGATCTGGAGTTACAGTTCTCCCTGCAATTaGATTCTGGTCTTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: TVIGSRGRGAQRVLIWSYSSPCN*ILVFTT Trigger: GGTTGTGAAGACCAGAATGCAATTGCAGGGAGAACT...GTAACTCCAGATCAACACTCTTTGGGCACCTCTGCCTCTACTTCCTATCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCACCATTCATCAAGAACTaGTACAAGAGCGCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MKNIISVPSNLRGHLGLPPFIKN*YKSAGP Trigger: GGGCCCTGCGCTCTTGTACCAGTTCTTGATGAATGG...TGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | TTCAACCCTGAGATGGGTATGAAATATATCGGGGGATTTGTGGAAAAATTTAAACGACACCACTCACCATaGCAGCGGCCAGAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FNPEMGMKYIGGFVEKFKRHHSP*QRPEPP Trigger: AGGTGGCTCTGGCCGCTGCCATGGTGAGTGGTGTCG...TTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCATCTCAGGGTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| 3UTR CAA 72 bp | TGGAGCCTGAGTAACTTTGAACAGCTGGTAACTAGTTaGACTCTTCATGATCCCAACCTCTTTGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSLSNFEQLVTS*TLHDPNLFGPQ Trigger: CTGGGGACCAAAGAGGTTGGGATCATGAAGAGTCAAACTAGTTACCAGCTGTTCAAAGTTACTCAGGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
||
| CDS-3UTR CCA 90 bp | GGGAACCCAAGAATGGCAGTAGAAATATACTTTGGAGTGACTGATTCAACCCTGCTTCACCATGTAGATTaGGCTTCCCAGATATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNPRMAVEIYFGVTDSTLLHHVD*ASQICS Trigger: GGAGCATATCTGGGAAGCCCAATCTACATGGTGAAG...CAGGGTTGAATCAGTCACTCCAAAGTATATTTCTACTGCCATTCTTGGGTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGTATGAAATATATCGGGGGATTTGTGGAAAAATTTAAAGCAAGACCCACTGAGAAGGTGCACAGCTaGGTAGAGGAGCCGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: MGMKYIGGFVEKFKARPTEKVHS*VEEPMT Trigger: TGTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTC...AGTGGGTCTTGCTTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
||
| CDS-3UTR GCA 90 bp | TTCAACCCTGAGATGGGTATGAAATATATCGGGGGATTTGTGGAAAAATTTAAAAGGTGCCCAGTCGGATaGCATTCATCAAGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FNPEMGMKYIGGFVEKFKRCPVG*HSSRTG Trigger: ACCAGTTCTTGATGAATGGCATCCGACTGGGCACCT...TTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCATCTCAGGGTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 90 bp | GCAGGTAACCCCGAGACTCTGCCAGCCCGTAGGTGCCCAGTCGGATaGCATTCATCAAGAACTGGTACAAGAGCGCAGGGCCCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGNPETLPARRCPVG*HSSRTGTRAQGPGP Trigger: AGGGCCTGGGCCCTGCGCTCTTGTACCAGTTCTTGATGAATGGCATCCGACTGGGCACCTACGGGCTGGCAGAGTCTCGGGGTTACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS TCA 90 bp | CCAGGCCCTTCTGCAGGGCAGCTAGGCCATCCACCTTGCCAATGGTaGAGAAGGCGTGGAAGACGTTTCGGTAGTGGCGCTGGTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPSAGQLGHPPCQW*RRRGRRFGSGAGRC Trigger: GCACCTACCAGCGCCACTACCGAAACGTCTTCCACGCCTTCTTCACCATTGGCAAGGTGGATGGCCTAGCTGCCCTGCAGAAGGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CCA 90 bp | TCCCACTGGCTCAAGAGGTCCTTGATAGATGAGAAGGTGCACAGCTaGGTAGAGGAGCCGATGACAACTCTGGGCAGGCCGCCCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHWLKRSLIDEKVHS*VEEPMTTLGRPPTA Trigger: GGCCGTGGGCGGCCTGCCCAGAGTTGTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTCTTGAGCCAGTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 90 bp | CCATTCATCAAGAACTGGTACAAGAGCGCAGGGCCCAGGCCCTTCTaGAGGGCAGCTAGGCCATCCACCTTGCCAATGGTGAAGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PFIKNWYKSAGPRPF*RAARPSTLPMVKKA Trigger: CGCCTTCTTCACCATTGGCAAGGTGGATGGCCTAGCTGCCCTGCAGAAGGGCCTGGGCCCTGCGCTCTTGTACCAGTTCTTGATGAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS TCA 90 bp | CTGGGGAGGGAAGATCTCCCACTGGCTCAAGAGGTCCTTGATAGATaGGAAGGTGCACAGCTGGGTAGAGGAGCCGATGACAACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGREDLPLAQEVLDR*EGAQLGRGADDNSG Trigger: CCCAGAGTTGTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTCTTGAGCCAGTGGGAGATCTTCCCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS TCA 90 bp | CTGTCCGCGCTGTCTGCAGCAGAGCGTCCAAGATCCCCCGGTACATaGGGCCCTTGCCTCGAGTATCAGTGGGTTGGTTATAAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSALSAAERPRSPGT*GPCLEYQWVGYKVL Trigger: CAAGACTTTATAACCAACCCACTGATACTCGAGGCAAGGGCCTCATGTACCGGGGGATCTTGGACGCTCTGCTGCAGACAGCGCGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 90 bp | AGGACTGTGGGTGCCTTCATTAGTGTGCAGGTAACCCCGAGACTCTaGCAGCCCGTAGGTGCCCAGTCGGATGCCATTCATCAAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RTVGAFISVQVTPRL*QPVGAQSDAIHQEL Trigger: CAGTTCTTGATGAATGGCATCCGACTGGGCACCTACGGGCTGGCAGAGTCTCGGGGTTACCTGCACACTAATGAAGGCACCCACAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | AGGAGAACAGAGGAGTGGGCGTGGCTGTCCCCCTTAGGGGCATTGAGAGGTCAACAGTTCTCCCTGCAATaGCATTCTGGTCTTCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRTEEWAWLSPLGALRGQQFSLQ*HSGLHN Trigger: GTTGTGAAGACCAGAATGCAATTGCAGGGAGAACTG...TTGACCTCTCAATGCCCCTAAGGGGGACAGCCACGCCCACTCCTCTGTTCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | TCCCCCTTAGGGGCATTGAGAGGTCAATCTGTCAGCAGTCACTGTGATAGGAAGGCTAGGCCATCCACCTaGCCAATGGTGAAGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPLGALRGQSVSSHCDRKARPST*PMVKKA Trigger: CGCCTTCTTCACCATTGGCAAGGTGGATGGCCTAGC...CTTCCTATCACAGTGACTGCTGACAGATTGACCTCTCAATGCCCCTAAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | GAGGTCAATCTGTCAGCAGTCACTGTGATAGGAAGTAGAGGCAGAGGTGCCCAAGCTAGGCCATCCACCTaGCCAATGGTGAAGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVNLSAVTVIGSRGRGAQARPST*PMVKKA Trigger: CGCCTTCTTCACCATTGGCAAGGTGGATGGCCTAGC...TTGGGCACCTCTGCCTCTACTTCCTATCACAGTGACTGCTGACAGATTGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | GAAACTGTCCACTGTTCGGAGGCGCCTTCTCCGCCATCCTCCCTACAGGGGCCATCGAGTATCAGTGGGTaGGTTATAAAGTCTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETVHCSEAPSPPSSLQGPSSISG*VIKSCA Trigger: AGCACAAGACTTTATAACCAACCCACTGATACTCGA...TGGCCCCTGTAGGGAGGATGGCGGAGAAGGCGCCTCCGAACAGTGGACAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| CDS CCA 90 bp | GGCCCTTGCCTCGAGTATCAGTGGGTTGGTTATAAAGTCTTGTGCTaGCTACATCAAAGGGTGTCATTGCCACGACTATGGCGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GPCLEYQWVGYKVLC*LHQRVSLPRLWRHH Trigger: GTGGTGTCGCCATAGTCGTGGCAATGACACCCTTTGATGTAGCCAGCACAAGACTTTATAACCAACCCACTGATACTCGAGGCAAGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | ATGCTCCTCCTTACCACTGTTCCTCCCATGCCAGGTACCATTTTGAGGACGTTGTGGCTCAAGAGGTCCTaGATAGATGAGAAGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MLLLTTVPPMPGTILRTLWLKRS*IDEKVH Trigger: GTGCACCTTCTCATCTATCAAGGACCTCTTGAGCCA...CAACGTCCTCAAAATGGTACCTGGCATGGGAGGAACAGTGGTAAGGAGGAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018884.6 |
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| CDS TCA 90 bp | CTCCCTGCAATTGCATTCTGGTCTTCACAACCTCCAAGGGATTGGTaGACACACAGGCTCCACAGGCTGCTACACCACTCATTAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPAIAFWSSQPPRDW*THRLHRLLHHSLRS Trigger: ACTTCTTAATGAGTGGTGTAGCAGCCTGTGGAGCCTGTGTGTTCACCAATCCCTTGGAGGTTGTGAAGACCAGAATGCAATTGCAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | TCCCCCTTAGGGGCATTGAGAGGTCAATCTGTCAGCAGTCACTGTGATAGGAAGTCTTCACCATGTAGATaGGGCTTCCCAGATATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLGALRGQSVSSHCDRKSSPCR*GFPDML Trigger: GAGCATATCTGGGAAGCCCAATCTACATGGTGAAGA...CTTCCTATCACAGTGACTGCTGACAGATTGACCTCTCAATGCCCCTAAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | AACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCTGGCTCAAGAGGTCCTaGATAGATGAGAAGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NIISVPSNLRGHLGLPVPWLKRS*IDEKVH Trigger: GTGCACCTTCTCATCTATCAAGGACCTCTTGAGCCA...GGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | AACATAATTTCTGTGCCTTCAAATCTAAGAGGACACCTGGGTCTCCCAGTTCCCCAGTTCTCCCTGCAATaGCATTCTGGTCTTCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: NIISVPSNLRGHLGLPVPQFSLQ*HSGLHN Trigger: GTTGTGAAGACCAGAATGCAATTGCAGGGAGAACTG...GGGAACTGGGAGACCCAGGTGTCCTCTTAGATTTGAAGGCACAGAAATTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | AGTAGAGGCAGAGGTGCCCAAAGAGTGTTGATCTGGAGTTACAAGAGAGTGATTGTTGGTTATAAAGTCTaGTGCTGGCTACATCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRGRGAQRVLIWSYKRVIVGYKV*CWLHQR Trigger: CCTTTGATGTAGCCAGCACAAGACTTTATAACCAAC...AATCACTCTCTTGTAACTCCAGATCAACACTCTTTGGGCACCTCTGCCTCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | TTCAACCCTGAGATGGGTATGAAATATATCGGGGGATTTGTGGAAAAATTTAAAGTTGGTTATAAAGTCTaGTGCTGGCTACATCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FNPEMGMKYIGGFVEKFKVGYKV*CWLHQR Trigger: CCTTTGATGTAGCCAGCACAAGACTTTATAACCAAC...TTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCATCTCAGGGTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS-3UTR CAA 90 bp | TTCAACCCTGAGATGGGTATGAAATATATCGGGGGATTTGTGGAAAAATTTAAATCGAGTATCAGTGGGTaGGTTATAAAGTCTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FNPEMGMKYIGGFVEKFKSSISG*VIKSCA Trigger: AGCACAAGACTTTATAACCAACCCACTGATACTCGA...TTTAAATTTTTCCACAAATCCCCCGATATATTTCATACCCATCTCAGGGTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 72 bp | AAGAACTGGTACAAGAGCGCAGGGCCCAGGCCCTTCTaGAGGGCAGCTAGGCCATCCACCTTGCCAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KNWYKSAGPRPF*RAARPSTLPMV Trigger: CACCATTGGCAAGGTGGATGGCCTAGCTGCCCTGCAGAAGGGCCTGGGCCCTGCGCTCTTGTACCAGTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 72 bp | CCCGAGACTCTGCCAGCCCGTAGGTGCCCAGTCGGATaGCATTCATCAAGAACTGGTACAAGAGCGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PETLPARRCPVG*HSSRTGTRAQG Trigger: GCCCTGCGCTCTTGTACCAGTTCTTGATGAATGGCATCCGACTGGGCACCTACGGGCTGGCAGAGTCTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 72 bp | AGGCGTGGAAGACGTTTCGGTAGTGGCGCTGGTAGGTaGCTGGGGCCTGCAGTTCTCCCTGCAATTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRRFGSGAGR*LGPAVLPAIAF Trigger: GAATGCAATTGCAGGGAGAACTGCAGGCCCCAGGCACCTACCAGCGCCACTACCGAAACGTCTTCCACGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS TCA 72 bp | TCTGCAGGGCAGCTAGGCCATCCACCTTGCCAATGGTaGAGAAGGCGTGGAAGACGTTTCGGTAGTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAGQLGHPPCQW*RRRGRRFGSGA Trigger: AGCGCCACTACCGAAACGTCTTCCACGCCTTCTTCACCATTGGCAAGGTGGATGGCCTAGCTGCCCTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 72 bp | GGTGCCTTCATTAGTGTGCAGGTAACCCCGAGACTCTaGCAGCCCGTAGGTGCCCAGTCGGATGCCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GAFISVQVTPRL*QPVGAQSDAIH Trigger: ATGAATGGCATCCGACTGGGCACCTACGGGCTGGCAGAGTCTCGGGGTTACCTGCACACTAATGAAGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CCA 72 bp | CTCAAGAGGTCCTTGATAGATGAGAAGGTGCACAGCTaGGTAGAGGAGCCGATGACAACTCTGGGCAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LKRSLIDEKVHS*VEEPMTTLGRP Trigger: CGGCCTGCCCAGAGTTGTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTCTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CAA 90 bp | TTCCAGCTCTGGGGAGGGAAGATCTCCCACTGGCTCAAGAGGTCCTaGATAGATGAGAAGGTGCACAGCTGGGTAGAGGAGCCGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: FQLWGGKISHWLKRS*IDEKVHSWVEEPMT Trigger: TGTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTCTTGAGCCAGTGGGAGATCTTCCCTCCCCAGAGCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS TCA 72 bp | GAAGATCTCCCACTGGCTCAAGAGGTCCTTGATAGATaGGAAGGTGCACAGCTGGGTAGAGGAGCCGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: EDLPLAQEVLDR*EGAQLGRGADD Trigger: GTCATCGGCTCCTCTACCCAGCTGTGCACCTTCTCATCTATCAAGGACCTCTTGAGCCAGTGGGAGATCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CAA 90 bp | CAAGATCCCCCGGTACATGAGGCCCTTGCCTCGAGTATCAGTGGGTaGGTTATAAAGTCTTGTGCTGGCTACATCAAAGGGTGTCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: QDPPVHEALASSISG*VIKSCAGYIKGCHC Trigger: GCAATGACACCCTTTGATGTAGCCAGCACAAGACTTTATAACCAACCCACTGATACTCGAGGCAAGGGCCTCATGTACCGGGGGATCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS TCA 72 bp | ATTGCATTCTGGTCTTCACAACCTCCAAGGGATTGGTaGACACACAGGCTCCACAGGCTGCTACACCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: IAFWSSQPPRDW*THRLHRLLHHS Trigger: TGAGTGGTGTAGCAGCCTGTGGAGCCTGTGTGTTCACCAATCCCTTGGAGGTTGTGAAGACCAGAATGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 72 bp | ATAAAGTCTTGTGCTGGCTACATCAAAGGGTGTCATTaGCACGACTATGGCGACACCACTCACCATGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IKSCAGYIKGCH*HDYGDTTHHGS Trigger: GCTGCCATGGTGAGTGGTGTCGCCATAGTCGTGGCAATGACACCCTTTGATGTAGCCAGCACAAGACTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CAA 90 bp | AGTTCTCCCTGCAATTGCATTCTGGTCTTCACAACCTCCAAGGGATaGGTGAACACACAGGCTCCACAGGCTGCTACACCACTCATTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPCNCILVFTTSKG*VNTQAPQAATPLIK Trigger: CTTAATGAGTGGTGTAGCAGCCTGTGGAGCCTGTGTGTTCACCAATCCCTTGGAGGTTGTGAAGACCAGAATGCAATTGCAGGGAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CAA 72 bp | TATAAAGTCTTGTGCTGGCTACATCAAAGGGTGTCATaGCCACGACTATGGCGACACCACTCACCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YKVLCWLHQRVS*PRLWRHHSPWQ Trigger: CTGCCATGGTGAGTGGTGTCGCCATAGTCGTGGCAATGACACCCTTTGATGTAGCCAGCACAAGACTTTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS CAA 72 bp | CCTTGCCTCGAGTATCAGTGGGTTGGTTATAAAGTCTaGTGCTGGCTACATCAAAGGGTGTCATTGCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PCLEYQWVGYKV*CWLHQRVSLPR Trigger: TCGTGGCAATGACACCCTTTGATGTAGCCAGCACAAGACTTTATAACCAACCCACTGATACTCGAGGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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| CDS GCA 72 bp | TGCCTCGAGTATCAGTGGGTTGGTTATAAAGTCTTGTaGTGGCTACATCAAAGGGTGTCATTGCCACGACTA | + |
|
Preference number: 6 (lower is better) Translates to: CLEYQWVGYKVL*WLHQRVSLPRL Trigger: TAGTCGTGGCAATGACACCCTTTGATGTAGCCAGCACAAGACTTTATAACCAACCCACTGATACTCGAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018884.6 ENSMUST00000102606.10 |
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