Pregenerated sensors for SLC25A34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040740Ensembl transcript IDs: ENSMUST00000038661.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCAGGGCCTGACTCAAGCTAGCTCTGGGCAGCCAGTCTTACACTaGCAGGCCATCACCTCTACCAGATGGCAGGCTTGGTGGTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: WQGLTQASSGQPVLH*QAITSTRWQAWWWD Trigger: ATCCCACCACCAAGCCTGCCATCTGGTAGAGGTGATGGCCTGTCAGTGTAAGACTGGCTGCCCAGAGCTAGCTTGAGTCAGGCCCTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 90 bp | TTTCATAGGAGAAAGGCCACTGGGTGCCTTACACACCTGTCCCTGTaGTGGAGCGTGCCTGCAGTCTGGAGAGAGGGCTCGGAGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: FHRRKATGCLTHLSL*WSVPAVWREGSECV Trigger: GACACACTCCGAGCCCTCTCTCCAGACTGCAGGCACGCTCCACCACAGGGACAGGTGTGTAAGGCACCCAGTGGCCTTTCTCCTATGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 90 bp | TTAAAGTCAAGGAAAGAGGTCTCAGGAGAAGTCAGCCTTGGGCTGTaGTGTGGACCACGGGCAGATCACGTGACCAGCATGCCCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LKSRKEVSGEVSLGL*CGPRADHVTSMPRP Trigger: GGGCCTGGGCATGCTGGTCACGTGATCTGCCCGTGGTCCACACCACAGCCCAAGGCTGACTTCTCCTGAGACCTCTTTCCTTGACTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 90 bp | CCCTCGGTAATATGCAGTCCCTGTGTGGGTCCTATTCAACAGAACTaGGTCTCCATCTCCCTGTCCTCCTCCTCCTCCTCTTCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: PSVICSPCVGPIQQN*VSISLSSSSSSSSS Trigger: GGAGGAGGAAGAGGAGGAGGAGGAGGACAGGGAGATGGAGACCCAGTTCTGTTGAATAGGACCCACACAGGGACTGCATATTACCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR TCA 90 bp | ACCAGCATGCCCAGGCCCTGGCTCTACCACAGCACCACAGATAACTaGAATAAAAGAGAGACGCCAACACCGCCAATACCTTCCTGCGCT | + |
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Preference number: 1 (lower is better) Translates to: TSMPRPWLYHSTTDN*NKRETPTPPIPSCA Trigger: AGCGCAGGAAGGTATTGGCGGTGTTGGCGTCTCTCTTTTATTTCAGTTATCTGTGGTGCTGTGGTAGAGCCAGGGCCTGGGCATGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 90 bp | TTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTaGCCAAGAGCGAGTGTCCACTTTCATAGGAGAAAGGCCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: FFSLGKWLGKVVEAT*PRASVHFHRRKATG Trigger: CCCAGTGGCCTTTCTCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR TCA 90 bp | TCATGTGGTCACACAGTGGGTGGAGGACTGAGGAGCCAGTGCAGCTaGGTGGCTCCCCTAATGGGAATCTTTAAATGTAGGCATTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SCGHTVGGGLRSQCS*VAPLMGIFKCRHCC Trigger: ACAGCAATGCCTACATTTAAAGATTCCCATTAGGGGAGCCACTCAGCTGCACTGGCTCCTCAGTCCTCCACCCACTGTGTGACCACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 90 bp | TCAGGAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTaGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACT | + |
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Preference number: 1 (lower is better) Translates to: SGVFIWSNFSHLGSG*GRWLRLPGQERVST Trigger: AGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR TCA 90 bp | GTGGGCAGTCTGCCGACTGATCTATGTCCCCAGCCTGAGGAAAGCTaGTTTTACTCAGATTCAGAGAAGACCAAAGGAAGCTGCTCATTT | + |
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Preference number: 1 (lower is better) Translates to: VGSLPTDLCPQPEES*FYSDSEKTKGSCSF Trigger: AAATGAGCAGCTTCCTTTGGTCTTCTCTGAATCTGAGTAAAATCAGCTTTCCTCAGGCTGGGGACATAGATCAGTCGGCAGACTGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 90 bp | TTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTaGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGA | + |
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Preference number: 1 (lower is better) Translates to: FIWSNFSHLGSGWGR*LRLPGQERVSTFIG Trigger: TCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CAA 90 bp | GGTGGAGCGTGCCTGCAGTCTGGAGAGAGGGCTCGGAGTGTGTCGTaGGCCCTGCAGTGGCTCTGCTCCGTGACCCACATGGACAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GGACLQSGERARSVS*ALQWLCSVTHMDRH Trigger: GTGCCTGTCCATGTGGGTCACGGAGCAGAGCCACTGCAGGGCCAACGACACACTCCGAGCCCTCTCTCCAGACTGCAGGCACGCTCCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | AAGACTGCTGCTGACGCCCTAATCCAGCCCCTCAGGGACTGTAGAGGGAGGCCGCTGCCTCCCCAGGGCTaGGAATACAGGCAGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KTAADALIQPLRDCRGRPLPPQG*EYRQGP Trigger: TGGCCCCTGCCTGTATTCTCAGCCCTGGGGAGGCAG...CGGCCTCCCTCTACAGTCCCTGAGGGGCTGGATTAGGGCGTCAGCAGCAGTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CAA 90 bp | GTGGTGACATGGGGCACACTGGTCCTGGGGCTCAATGGATCCCAGTaGTCCATTGTTCCTTGCCTTCTCCTCCTGGCTTGTGGCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VVTWGTLVLGLNGSQ*SIVPCLLLLACGRA Trigger: GGCCCTGCCACAAGCCAGGAGGAGAAGGCAAGGAACAATGGACAACTGGGATCCATTGAGCCCCAGGACCAGTGTGCCCCATGTCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGAGTGTGTCGTTGGCCCTGCAGTGGCTCTGCTCCGTGACCCACATGGACAGCAGCCAGTCTTACACTaGCAGGCCATCACCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: SECVVGPAVALLRDPHGQQPVLH*QAITST Trigger: GGTAGAGGTGATGGCCTGTCAGTGTAAGACTGGCTG...CTGTCCATGTGGGTCACGGAGCAGAGCCACTGCAGGGCCAACGACACACTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGACAGTGGGTGGAGGACTaGGGAGCCAGTGCAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: WGRWLRLPGQERVSTFIGQWVED*GASAAE Trigger: CTCAGCTGCACTGGCTCCTCAGTCCTCCACCCACTG...TCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CAA 90 bp | CACACTGGTCCTGGGGCTCAATGGATCCCAGTTGTCCATTGTTCCTaGCCTTCTCCTCCTGGCTTGTGGCAGGGCCTGACTCAAGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: HTGPGAQWIPVVHCS*PSPPGLWQGLTQAS Trigger: GCTAGCTTGAGTCAGGCCCTGCCACAAGCCAGGAGGAGAAGGCAAGGAACAATGGACAACTGGGATCCATTGAGCCCCAGGACCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGAAACTCCAGATCCTCCTaGCTCTGCCTCCCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WGRWLRLPGQERVSTFIGNSRSS*LCLPRA Trigger: AGCCCTGGGGAGGCAGAGGCAGGAGGATCTGGAGTT...TCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCACATGCAGTGGCCTCTGAGGGACACGAAGCCCAGTAGTCCTGATGTAGCCCTCCAGCCAGAGACATaGCTCCCCTCAGCCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SHMQWPLRDTKPSSPDVALQPET*LPSASV Trigger: AACTGAGGCTGAGGGGAGCCATGTCTCTGGCTGGAG...GGCTACATCAGGACTACTGGGCTTCGTGTCCCTCAGAGGCCACTGCATGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGCCAAGGACTCCCTGGTaGCACAAGGGTCTCACATGC | + |
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Preference number: 2 (lower is better) Translates to: FSLGKWLGKVVEATWPRAPRTPW*HKGLTC Trigger: GCATGTGAGACCCTTGTGCCACCAGGGAGTCCTTGG...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTCTCTCCTCTCTGGCTCTCATGGAATCCAGGCTGACCTCAGACTTGCTAGCATGCCCAGGCCCTaGCTCTACCACAGCACCACA | + |
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Preference number: 2 (lower is better) Translates to: SLSLLSGSHGIQADLRLASMPRP*LYHSTT Trigger: TGTGGTGCTGTGGTAGAGCCAGGGCCTGGGCATGCT...AGCAAGTCTGAGGTCAGCCTGGATTCCATGAGAGCCAGAGAGGAGAGAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGACTCGGAGTGTGTCGTTaGCCCTGCAGTGGCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: WGRWLRLPGQERVSTFIGLGVCR*PCSGSA Trigger: AGCAGAGCCACTGCAGGGCCAACGACACACTCCGAG...TCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTCTCTCCTCTCTGGCTCTCATGGAATCCAGGCTGACCTCAGACTTGCTAAAGAGGTGGTGACATaGGGCACACTGGTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLSLLSGSHGIQADLRLAKEVVT*GTLVLG Trigger: CCCCAGGACCAGTGTGCCCCATGTCACCACCTCTTT...AGCAAGTCTGAGGTCAGCCTGGATTCCATGAGAGCCAGAGAGGAGAGAGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTTCATTTGGATCCTaGGGGGCCTCGTGGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: FSLGKWLGKVVEATWPRASSFGS*GASWAS Trigger: TGATGCCCACGAGGCCCCCCAGGATCCAAATGAACT...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCACATGCAGTGGCCTCTGAGGGACACGAAGCCCAGTAGTCCTGATGTAGCCGAAATAAAGAGGTGGTaGCATGGGGCACACTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SHMQWPLRDTKPSSPDVAEIKRW*HGAHWS Trigger: GGACCAGTGTGCCCCATGTCACCACCTCTTTATTTC...GGCTACATCAGGACTACTGGGCTTCGTGTCCCTCAGAGGCCACTGCATGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCATGGAATCCAGGCTGACCTCAGACTTGCTATGGAGCCGAGGATGACTCCGTCAGTTTCCCCATGCTaGGAGAGGCTCATGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SHGIQADLRLAMEPRMTPSVSPC*ERLMWS Trigger: TGACCACATGAGCCTCTCTCAGCATGGGGAAACTGA...CGGAGTCATCCTCGGCTCCATAGCAAGTCTGAGGTCAGCCTGGATTCCATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR GCA 90 bp | AAGACTGCTGCTGACGCCCTAATCCAGCCCCTCAGGGACTGTAGAGGGAGGCCGTTTAAATGTAGGCATTaGTGTGGCCATGAGCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: KTAADALIQPLRDCRGRPFKCRH*CGHELR Trigger: CCTTAGCTCATGGCCACAGCAATGCCTACATTTAAA...CGGCCTCCCTCTACAGTCCCTGAGGGGCTGGATTAGGGCGTCAGCAGCAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCGGTAATATGCAGTCCCTGTGTGGGTCCTATTCAACAGAACTGGGTCTCAGGAGAAGTCAGCCTTaGGCTGTGGTGTGGACCACG | + |
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Preference number: 2 (lower is better) Translates to: SLGNMQSLCGSYSTELGLRRSQP*AVVWTT Trigger: CGTGGTCCACACCACAGCCCAAGGCTGACTTCTCCT...GAGACCCAGTTCTGTTGAATAGGACCCACACAGGGACTGCATATTACCGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTGGGGGTAGGCAGAGTTaGACTCCAGTCCTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGGGRQS*TPVLAL Trigger: CAGAGCCAGGACTGGAGTTCAACTCTGCCTACCCCC...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTGTCAGCCTTGGGCTGTaGTGTGGACCACGGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGVSLGL*CGPRAD Trigger: ATCTGCCCGTGGTCCACACCACAGCCCAAGGCTGAC...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTAGATCCTCCTGCCTCTaGCTCCCCAGGGCTGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGRSSCL*LPRAEN Trigger: ATTCTCAGCCCTGGGGAGGCAGAGGCAGGAGGATCT...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTGGGTCTCACATGCAGTaGCCTCTGAGGGACACGAAG | + |
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Preference number: 2 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGGSHMQ*PLRDTK Trigger: CTTCGTGTCCCTCAGAGGCCACTGCATGTGAGACCC...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCAGCCTGAGGAAAGCTGATTTTACTCAGATTCAGAGAAGACCAAAGGAATGGCCAACCAGACTCTaGGGACACCAAGGACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VPSLRKADFTQIQRRPKEWPTRL*GHQGLP Trigger: AGGGAGTCCTTGGTGTCCCCAGAGTCTGGTTGGCCA...TTCCTTTGGTCTTCTCTGAATCTGAGTAAAATCAGCTTTCCTCAGGCTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CAA 90 bp | ATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTaGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: IWSNFSHLGSGWGRW*RLPGQERVSTFIGE Trigger: TTCTCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCAGCCTGAGGAAAGCTGATTTTACTCAGATTCAGAGAAGACCAAAGGAAATCACCTCTACCAGATaGCAGGCTTGGTGGTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: VPSLRKADFTQIQRRPKEITSTR*QAWWWD Trigger: ATCCCACCACCAAGCCTGCCATCTGGTAGAGGTGAT...TTCCTTTGGTCTTCTCTGAATCTGAGTAAAATCAGCTTTCCTCAGGCTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CAA 90 bp | TTATTGGAGTGTTCAGGAGTGTTCATCTGGAGTAATTTTTCTCACTaGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLECSGVFIWSNFSH*GSGWGRWLRLPGQE Trigger: CTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTCCTGAACACTCCAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCGGTAATATGCAGTCCCTGTGTGGGTCCTATTCAACAGAACTGGGTCTCAGCACCACAGATAACTaGAATAAAAGAGAGACGCCA | + |
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Preference number: 2 (lower is better) Translates to: SLGNMQSLCGSYSTELGLSTTDN*NKRETP Trigger: TGGCGTCTCTCTTTTATTTCAGTTATCTGTGGTGCT...GAGACCCAGTTCTGTTGAATAGGACCCACACAGGGACTGCATATTACCGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTGTCCTGGCTCTGTCATaGCAAACATATGTGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGVLALS*QTYVAP Trigger: TGGAGCCACATATGTTTGCCATGACAGAGCCAGGAC...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 72 bp | GGAGAGAGGGCTCGGAGTGTGTCGTTGGCCCTGCAGTaGCTCTGCTCCGTGACCCACATGGACAGGCACCCT | + |
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Preference number: 3 (lower is better) Translates to: GERARSVSLALQ*LCSVTHMDRHP Trigger: AGGGTGCCTGTCCATGTGGGTCACGGAGCAGAGCCACTGCAGGGCCAACGACACACTCCGAGCCCTCTCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR GCA 72 bp | CTGGGTGCCTTACACACCTGTCCCTGTGGTGGAGCGTaGCTGCAGTCTGGAGAGAGGGCTCGGAGTGTGTCG | + |
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Preference number: 3 (lower is better) Translates to: LGALHTCPCGGA*LQSGERARSVS Trigger: CGACACACTCCGAGCCCTCTCTCCAGACTGCAGGCACGCTCCACCACAGGGACAGGTGTGTAAGGCACCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 72 bp | AAGGCCACTGGGTGCCTTACACACCTGTCCCTGTGGTaGAGCGTGCCTGCAGTCTGGAGAGAGGGCTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: KATGCLTHLSLW*SVPAVWREGSE Trigger: CTCCGAGCCCTCTCTCCAGACTGCAGGCACGCTCCACCACAGGGACAGGTGTGTAAGGCACCCAGTGGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR TCA 72 bp | GGAGTGTGTCGTTGGCCCTGCAGTGGCTCTGCTCCGTaGCCCACATGGACAGGCACCCTCTTTCCTAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GVCRWPCSGSAP*PTWTGTLFPRP Trigger: AGGCCTAGGAAAGAGGGTGCCTGTCCATGTGGGTCACGGAGCAGAGCCACTGCAGGGCCAACGACACACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR GCA 72 bp | GTGCCTTACACACCTGTCCCTGTGGTGGAGCGTGCCTaGAGTCTGGAGAGAGGGCTCGGAGTGTGTCGTTGG | + |
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Preference number: 3 (lower is better) Translates to: VPYTPVPVVERA*SLERGLGVCRW Trigger: CCAACGACACACTCCGAGCCCTCTCTCCAGACTGCAGGCACGCTCCACCACAGGGACAGGTGTGTAAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 72 bp | AGAAAGGCCACTGGGTGCCTTACACACCTGTCCCTGTaGTGGAGCGTGCCTGCAGTCTGGAGAGAGGGCTCG | + |
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Preference number: 3 (lower is better) Translates to: RKATGCLTHLSL*WSVPAVWREGS Trigger: CGAGCCCTCTCTCCAGACTGCAGGCACGCTCCACCACAGGGACAGGTGTGTAAGGCACCCAGTGGCCTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR GCA 72 bp | ATGGAGCCGAGGATGACTCCGAACTCCAGATCCTCCTaGCTCTGCCTCCCCAGGGCTGAGAATACAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: MEPRMTPNSRSS*LCLPRAENTGR Trigger: CCTGCCTGTATTCTCAGCCCTGGGGAGGCAGAGGCAGGAGGATCTGGAGTTCGGAGTCATCCTCGGCTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 72 bp | AGAGGTCTCAGGAGAAGTCAGCCTTGGGCTGTGGTGTaGACCACGGGCAGATCACGTGACCAGCATGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RGLRRSQPWAVV*TTGRSRDQHAQ Trigger: CTGGGCATGCTGGTCACGTGATCTGCCCGTGGTCCACACCACAGCCCAAGGCTGACTTCTCCTGAGACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR TCA 72 bp | TCCAGGCTGACCTCAGACTTGCTATGGAGCCGAGGATaGCTCCGAACTCCAGATCCTCCTGCCTCTGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SRLTSDLLWSRG*LRTPDPPASAS Trigger: GGAGGCAGAGGCAGGAGGATCTGGAGTTCGGAGTCATCCTCGGCTCCATAGCAAGTCTGAGGTCAGCCTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR TCA 72 bp | CTGACTCAAGCTAGCTCTGGGCAGCCAGTCTTACACTaGCAGGCCATCACCTCTACCAGATGGCAGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LTQASSGQPVLH*QAITSTRWQAW Trigger: CCAAGCCTGCCATCTGGTAGAGGTGATGGCCTGTCAGTGTAAGACTGGCTGCCCAGAGCTAGCTTGAGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| 3UTR CCA 72 bp | CATGGTATGGGGGTAGGCAGAGTTGAACTCCAGTCCTaGCTCTGTCATGGCAAACATATGTGGCTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HGMGVGRVELQS*LCHGKHMWLQP Trigger: TGGCTGGAGCCACATATGTTTGCCATGACAGAGCCAGGACTGGAGTTCAACTCTGCCTACCCCCATACCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CCA 72 bp | ATATGCAGTCCCTGTGTGGGTCCTATTCAACAGAACTaGGTCTCCATCTCCCTGTCCTCCTCCTCCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ICSPCVGPIQQN*VSISLSSSSSS Trigger: AGAGGAGGAGGAGGAGGACAGGGAGATGGAGACCCAGTTCTGTTGAATAGGACCCACACAGGGACTGCATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CCA 72 bp | CTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTaGCCAAGAGCGAGTGTCCACTTTCATAGGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGKWLGKVVEAT*PRASVHFHRRK Trigger: CTTTCTCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR TCA 72 bp | CCCAGGCCCTGGCTCTACCACAGCACCACAGATAACTaGAATAAAAGAGAGACGCCAACACCGCCAATACCT | + |
|
Preference number: 3 (lower is better) Translates to: PRPWLYHSTTDN*NKRETPTPPIP Trigger: AGGTATTGGCGGTGTTGGCGTCTCTCTTTTATTTCAGTTATCTGTGGTGCTGTGGTAGAGCCAGGGCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTCCTTCTCCTCCTGGCTaGTGGCAGGGCCTGACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGPSPPG*WQGLTQ Trigger: TTGAGTCAGGCCCTGCCACAAGCCAGGAGGAGAAGG...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR TCA 72 bp | ATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTaGGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IFLTWEVVGEGG*GYLAKSECPLS Trigger: TGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR GCA 72 bp | GTGGCTCCCCTAATGGGAATCTTTAAATGTAGGCATTaGTGTGGCCATGAGCTAAGGCATGGTAACCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VAPLMGIFKCRH*CGHELRHGNPG Trigger: CCCTGGGTTACCATGCCTTAGCTCATGGCCACAGCAATGCCTACATTTAAAGATTCCCATTAGGGGAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CCA 72 bp | AGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTaGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SNFSHLGSGWGR*LRLPGQERVST Trigger: AGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCTCTCTCCTCTCTGGCTCTCATGGAATCCAGGCTGACCTCAGACTTGCTGCTTCAGAACTTGGTTaGATAACTAGCTTTGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLLSGSHGIQADLRLAASELG*ITSFGQ Trigger: TTGGCCAAAGCTAGTTATCAAACCAAGTTCTGAAGC...AGCAAGTCTGAGGTCAGCCTGGATTCCATGAGAGCCAGAGAGGAGAGAGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR TCA 72 bp | TCTTCGTTGAGAGCATGGTATGGGGGTAGGCAGAGTTaGACTCCAGTCCTGGCTCTGTCATGGCAAACATAT | + |
|
Preference number: 3 (lower is better) Translates to: SSLRAWYGGRQS*TPVLALSWQTY Trigger: ATATGTTTGCCATGACAGAGCCAGGACTGGAGTTCAACTCTGCCTACCCCCATACCATGCTCTCAACGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCGGTAATATGCAGTCCCTGTGTGGGTCCTATTCAACAGAACTGGGTCTCTGTTTTGCTAAGCCATaGAGGCAGCTTCAGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLGNMQSLCGSYSTELGLCFAKP*RQLQNL Trigger: CAAGTTCTGAAGCTGCCTCAATGGCTTAGCAAAACA...GAGACCCAGTTCTGTTGAATAGGACCCACACAGGGACTGCATATTACCGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR TCA 72 bp | CTGCCGACTGATCTATGTCCCCAGCCTGAGGAAAGCTaGTTTTACTCAGATTCAGAGAAGACCAAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPTDLCPQPEES*FYSDSEKTKGS Trigger: GCTTCCTTTGGTCTTCTCTGAATCTGAGTAAAATCAGCTTTCCTCAGGCTGGGGACATAGATCAGTCGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTGGGCTGTGGTGTGGACCACGGGCAGATCACGTGACCAGCATGCCCAGCAGCTGAACCTACTGTaGCTCGGGGCACAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPWAVVWTTGRSRDQHAQQLNLL*LGAQPH Trigger: GTGGGGCTGTGCCCCGAGTCACAGTAGGTTCAGCTG...CTGGGCATGCTGGTCACGTGATCTGCCCGTGGTCCACACCACAGCCCAAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CAA 72 bp | TGCCTGCAGTCTGGAGAGAGGGCTCGGAGTGTGTCGTaGGCCCTGCAGTGGCTCTGCTCCGTGACCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: CLQSGERARSVS*ALQWLCSVTHM Trigger: CATGTGGGTCACGGAGCAGAGCCACTGCAGGGCCAACGACACACTCCGAGCCCTCTCTCCAGACTGCAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTGCTGCTGACGCCCTAATCCAGCCCCTCAGGGACTGTAGAGGGAGGCCGCCACGGCTATACTGCTaGTCATGCCACCAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTAADALIQPLRDCRGRPPRLYC*SCHQPG Trigger: CCCTGGCTGGTGGCATGATCAGCAGTATAGCCGTGG...CGGCCTCCCTCTACAGTCCCTGAGGGGCTGGATTAGGGCGTCAGCAGCAGTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGGGCCGTGGGTAGGTaGCTGGGGCCTGCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLGKWLGKVVEATWPRARAVGR*LGPAVP Trigger: GGGAACTGCAGGCCCCAGGCACCTACCCACGGCCCT...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGAAAGGCCACTGGGTGCCTTACACACCTGTCCCTGTGGTGGAGCGTGCGCCACAGCCCCAGCATaGCCTGTTGGCGCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: IGERPLGALHTCPCGGACATAPA*PVGARW Trigger: CCATCTGGCGCCAACAGGGCATGCTGGGGCTGTGGC...GCACGCTCCACCACAGGGACAGGTGTGTAAGGCACCCAGTGGCCTTTCTCCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGCCGTGGGTAGGTGCCTaGGGCCTGCAGTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLGKWLGKVVEATWPRAPWVGA*GLQFPL Trigger: CAGGGGGAACTGCAGGCCCCAGGCACCTACCCACGG...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTGCTGCTGACGCCCTAATCCAGCCCCTCAGGGACTGTAGAGGGAGGCCGAGGGGTCCCTCCTGTTaGCAGGTCTTCACCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTAADALIQPLRDCRGRPRGPSC*QVFTRQ Trigger: TTGCCTGGTGAAGACCTGTCAACAGGAGGGACCCCT...CGGCCTCCCTCTACAGTCCCTGAGGGGCTGGATTAGGGCGTCAGCAGCAGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTGGGCTGTGGTGTGGACCACGGGCAGATCACGTGACCAGCATGCCCAGGAGGCCAGCCTGGCATaGCAGGCTATAGCAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPWAVVWTTGRSRDQHAQEASLA*QAIAVE Trigger: TTCTACTGCTATAGCCTGGCATGCCAGGCTGGCCTC...CTGGGCATGCTGGTCACGTGATCTGCCCGTGGTCCACACCACAGCCCAAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGACTTGCTATGGAGCCGAGGATGACTCCGAACTCCAGATCCTCCTGCCTGACCACAGTGCCGCCTaGTTGTTGGGTGAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQTCYGAEDDSELQILLPDHSAA*LLGEAS Trigger: GCTGGCCTCACCCAACAACCAGGCGGCACTGTGGTC...AGGCAGGAGGATCTGGAGTTCGGAGTCATCCTCGGCTCCATAGCAAGTCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | TCGGAGTGTGTCGTTGGCCCTGCAGTGGCTCTGCTCCGTGACCCACATGGACAGATAGTAGCCACTGTCTaGGCCTGCAGCTGTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SECVVGPAVALLRDPHGQIVATV*ACSCVL Trigger: CAAGACACAGCTGCAGGCTCAGACAGTGGCTACTAT...CTGTCCATGTGGGTCACGGAGCAGAGCCACTGCAGGGCCAACGACACACTCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGGCTCTGTCCACTGGCTaGTTGTACAGCCGCGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLGKWLGKVVEATWPRAALSTG*LYSRVL Trigger: CAGCACGCGGCTGTACAATCAGCCAGTGGACAGAGC...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTCTCTCCTCTCTGGCTCTCATGGAATCCAGGCTGACCTCAGACTTGCTGCAGCCAGCCCCTTCTaGAGGCCCCATAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSGSHGIQADLRLAAASPF*RPHSPS Trigger: AGATGGGCTATGGGGCCTGCAGAAGGGGCTGGCTGC...AGCAAGTCTGAGGTCAGCCTGGATTCCATGAGAGCCAGAGAGGAGAGAGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGACCCAGCATGCCCTGTTaGCGCCAGATGGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WGRWLRLPGQERVSTFIGPSMPC*RQMVSR Trigger: CCTGGAGACCATCTGGCGCCAACAGGGCATGCTGGG...TCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGAGTGTCCACTTTCATAGGACATACAGCTGGCCCCTaGCAGCTCTGTCCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGRWLRLPGQERVSTFIGHTAGP*QLCPLA Trigger: AGCCAGTGGACAGAGCTGGCAGGGGCCAGCTGTATG...TCCTATGAAAGTGGACACTCGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTGCCCCGGTAGGGCCGTaGGTAGGTGCCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGAPVGP*VGAWGL Trigger: CAGGCCCCAGGCACCTACCCACGGCCCTACCGGGGC...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCGGTAATATGCAGTCCCTGTGTGGGTCCTATTCAACAGAACTGGGTCTCAGGCCCCCATACAGCTaGCCCCTGCCAGCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGNMQSLCGSYSTELGLRPPYS*PLPALS Trigger: GGACAGAGCTGGCAGGGGCCAGCTGTATGGGGGCCT...GAGACCCAGTTCTGTTGAATAGGACCCACACAGGGACTGCATATTACCGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CAA 72 bp | CCAGTTGTCCATTGTTCCTTGCCTTCTCCTCCTGGCTaGTGGCAGGGCCTGACTCAAGCTAGCTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVVHCSLPSPPG*WQGLTQASSGQ Trigger: CTGCCCAGAGCTAGCTTGAGTCAGGCCCTGCCACAAGCCAGGAGGAGAAGGCAAGGAACAATGGACAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CAA 72 bp | CACTGGTCCTGGGGCTCAATGGATCCCAGTTGTCCATaGTTCCTTGCCTTCTCCTCCTGGCTTGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HWSWGSMDPSCP*FLAFSSWLVAG Trigger: CCCTGCCACAAGCCAGGAGGAGAAGGCAAGGAACAATGGACAACTGGGATCCATTGAGCCCCAGGACCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGGTAAAGGTGGCCAGCTaGGCAGCTGAACCTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLGKWLGKVVEATWPRAVKVAS*AAEPTV Trigger: CACAGTAGGTTCAGCTGCCCAGCTGGCCACCTTTAC...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| 3UTR CAA 72 bp | TGGGGCACACTGGTCCTGGGGCTCAATGGATCCCAGTaGTCCATTGTTCCTTGCCTTCTCCTCCTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGTLVLGLNGSQ*SIVPCLLLLAC Trigger: ACAAGCCAGGAGGAGAAGGCAAGGAACAATGGACAACTGGGATCCATTGAGCCCCAGGACCAGTGTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATGGAATCCAGGCTGACCTCAGACTTGCTATGGAGCCGAGGATGACTCCGGCCTGCAGTTCCCCCTaGAGTTGTAGACGGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHGIQADLRLAMEPRMTPACSSP*SCRRVF Trigger: AAAGACCCGTCTACAACTGCAGGGGGAACTGCAGGC...CGGAGTCATCCTCGGCTCCATAGCAAGTCTGAGGTCAGCCTGGATTCCATGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTTGAGGCTACCTGGCCAAGAGCGCAGGGGTGTCATGACTaGAACCACGGCTATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLGKWLGKVVEATWPRAQGCHD*NHGYTA Trigger: AGCAGTATAGCCGTGGTTGCAGTCATGACACCCCTG...CGCTCTTGGCCAGGTAGCCTCAACCACCTTCCCCAACCACTTCCCAAGTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTGGCCAGCTGGGCAGCTaGACCTACTGTGACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGGQLGS*TYCDSG Trigger: CCCCGAGTCACAGTAGGTTCAGCTGCCCAGCTGGCC...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGTTCATCTGGAGTAATTTTTCTCACTTGGGAAGTGGTTGGGGAAGGTGGTCCTGCAGCTGTGTCTTaGCCAGGTAAGCAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECSSGVIFLTWEVVGEGGPAAVS*PGKQDS Trigger: GGAGTCCTGCTTACCTGGTCAAGACACAGCTGCAGG...ACCACCTTCCCCAACCACTTCCCAAGTGAGAAAAATTACTCCAGATGAACACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS CCA 90 bp | TGTCGATCCTGTACCCAAGCCTTGGCAGAGGTAAAGGTGGCCAGCTaGGCAGCTGAACCTACTGTGACTCGGGGCACAGCCCCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CRSCTQALAEVKVAS*AAEPTVTRGTAPPT Trigger: TGTGGGTGGGGCTGTGCCCCGAGTCACAGTAGGTTCAGCTGCCCAGCTGGCCACCTTTACCTCTGCCAAGGCTTGGGTACAGGATCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGACTTGCTATGGAGCCGAGGATGACTCCGAACTCCAGATCCTCCTGCCTCCCCAGCATGCCCTGTaGGCGCCAGATGGTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQTCYGAEDDSELQILLPPQHAL*APDGLQ Trigger: CTGGAGACCATCTGGCGCCAACAGGGCATGCTGGGG...AGGCAGGAGGATCTGGAGTTCGGAGTCATCCTCGGCTCCATAGCAAGTCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS TCA 90 bp | CAGCCTGGCATGCCAGGCTATAGCAGTAGAAACGGACACCATTCATaGGGCCCTGGTAGAGAAGGCCAGCAGCCAGCCCCTTCTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QPGMPGYSSRNGHHS*GPGREGQQPAPSAG Trigger: GCCTGCAGAAGGGGCTGGCTGCTGGCCTTCTCTACCAGGGCCTCATGAATGGTGTCCGTTTCTACTGCTATAGCCTGGCATGCCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS GCA 90 bp | TGCGACCACAGTGCCGCCTGGTTGTTGGGTGAGGCCAGCCTGGCATaGCAGGCTATAGCAGTAGAAACGGACACCATTCATGAGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CDHSAAWLLGEASLA*QAIAVETDTIHEAL Trigger: CAGGGCCTCATGAATGGTGTCCGTTTCTACTGCTATAGCCTGGCATGCCAGGCTGGCCTCACCCAACAACCAGGCGGCACTGTGGTCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CAA 90 bp | CTCAAGCTAGCTCTGGGCAGCCAGTCTTACACTGACAGGCCATCACCTCTACCAAGTGCCGCCTGGTTGTaGGGTGAGGCCAGCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKLALGSQSYTDRPSPLPSAAWL*GEASLA Trigger: TGCCAGGCTGGCCTCACCCAACAACCAGGCGGCACT...TGGTAGAGGTGATGGCCTGTCAGTGTAAGACTGGCTGCCCAGAGCTAGCTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS-3UTR CAA 90 bp | CTCAAGCTAGCTCTGGGCAGCCAGTCTTACACTGACAGGCCATCACCTCTACCACACAGTGCCGCCTGGTaGTTGGGTGAGGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKLALGSQSYTDRPSPLPHSAAW*LGEASL Trigger: CAGGCTGGCCTCACCCAACAACCAGGCGGCACTGTG...TGGTAGAGGTGATGGCCTGTCAGTGTAAGACTGGCTGCCCAGAGCTAGCTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS GCA 90 bp | CTGATTGTACAGCCGCGTGCTGACGACGTCCAGGGGTGTCATGACTaGAACCACGGCTATACTGCTGATCATGCCACCAGCCAGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LIVQPRADDVQGCHD*NHGYTADHATSQGH Trigger: GTGACCCTGGCTGGTGGCATGATCAGCAGTATAGCCGTGGTTGCAGTCATGACACCCCTGGACGTCGTCAGCACGCGGCTGTACAATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS CAA 90 bp | CCCCAATGCCCCAGCCGCAGCGCCTGCGACCACAGTGCCGCCTGGTaGTTGGGTGAGGCCAGCCTGGCATGCCAGGCTATAGCAGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQCPSRSACDHSAAW*LGEASLACQAIAVE Trigger: TTCTACTGCTATAGCCTGGCATGCCAGGCTGGCCTCACCCAACAACCAGGCGGCACTGTGGTCGCAGGCGCTGCGGCTGGGGCATTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS CAA 90 bp | CAATGCCCCAGCCGCAGCGCCTGCGACCACAGTGCCGCCTGGTTGTaGGGTGAGGCCAGCCTGGCATGCCAGGCTATAGCAGTAGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: QCPSRSACDHSAAWL*GEASLACQAIAVET Trigger: CGTTTCTACTGCTATAGCCTGGCATGCCAGGCTGGCCTCACCCAACAACCAGGCGGCACTGTGGTCGCAGGCGCTGCGGCTGGGGCATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS GCA 72 bp | CAGCCGCGTGCTGACGACGTCCAGGGGTGTCATGACTaGAACCACGGCTATACTGCTGATCATGCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPRADDVQGCHD*NHGYTADHATS Trigger: GCTGGTGGCATGATCAGCAGTATAGCCGTGGTTGCAGTCATGACACCCCTGGACGTCGTCAGCACGCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS CCA 72 bp | TGTACCCAAGCCTTGGCAGAGGTAAAGGTGGCCAGCTaGGCAGCTGAACCTACTGTGACTCGGGGCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CTQALAEVKVAS*AAEPTVTRGTA Trigger: GGCTGTGCCCCGAGTCACAGTAGGTTCAGCTGCCCAGCTGGCCACCTTTACCTCTGCCAAGGCTTGGGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS CAA 90 bp | AGCCAGCTGTCCTCCAAAAACCACTGTCGATCCTGTACCCAAGCCTaGGCAGAGGTAAAGGTGGCCAGCTGGGCAGCTGAACCTACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SQLSSKNHCRSCTQA*AEVKVASWAAEPTV Trigger: CACAGTAGGTTCAGCTGCCCAGCTGGCCACCTTTACCTCTGCCAAGGCTTGGGTACAGGATCGACAGTGGTTTTTGGAGGACAGCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
||
| CDS TCA 72 bp | ATGCCAGGCTATAGCAGTAGAAACGGACACCATTCATaGGGCCCTGGTAGAGAAGGCCAGCAGCCAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: MPGYSSRNGHHS*GPGREGQQPAP Trigger: AGGGGCTGGCTGCTGGCCTTCTCTACCAGGGCCTCATGAATGGTGTCCGTTTCTACTGCTATAGCCTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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| CDS GCA 72 bp | AGTGCCGCCTGGTTGTTGGGTGAGGCCAGCCTGGCATaGCAGGCTATAGCAGTAGAAACGGACACCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: SAAWLLGEASLA*QAIAVETDTIH Trigger: ATGAATGGTGTCCGTTTCTACTGCTATAGCCTGGCATGCCAGGCTGGCCTCACCCAACAACCAGGCGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038661.8 |
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