Pregenerated sensors for SLC25A33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028982Ensembl transcript IDs: ENSMUST00000105686.3
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCAGGCCCAGGGTGTACATCTGCATTTTCAGCCCTTGGGAGGCTaGGGCAGGAGATTTAAAGGTGAAGATCAGTCTGGGCTACAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: GQAQGVHLHFQPLGG*GRRFKGEDQSGLQH Trigger: GTGCTGTAGCCCAGACTGATCTTCACCTTTAAATCTCCTGCCTCAGCCTCCCAAGGGCTGAAAATGCAGATGTACACCCTGGGCCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR TCA 90 bp | CCTTCCAGAAACAAGAATCCAAAAGGAAATGTCCAACAGGTGACATaGGCCAGGTATTCTATGGCCTTCGCTGTTTCAGTTTTGAACACT | + |
|
Preference number: 1 (lower is better) Translates to: PSRNKNPKGNVQQVT*ARYSMAFAVSVLNT Trigger: AGTGTTCAAAACTGAAACAGCGAAGGCCATAGAATACCTGGCTCATGTCACCTGTTGGACATTTCCTTTTGGATTCTTGTTTCTGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTTTCCTGTCCACCACTCAGTCCCCACAAGTCACGCTTCTCACTTCCCCACGTCCAACAGGTGACATaGGCCAGGTATTCTATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ALSCPPLSPHKSRFSLPHVQQVT*ARYSMA Trigger: GGCCATAGAATACCTGGCTCATGTCACCTGTTGGAC...GTGGGGAAGTGAGAAGCGTGACTTGTGGGGACTGAGTGGTGGACAGGAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR CAA 90 bp | AGATGGAGATGTACAGAGGGAAAGCTGTGGACCATTTGCTCACAGTaGTCACCAAGCGTGACCGCTCTTTCCTGTCCACCACTCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RWRCTEGKLWTICSQ*SPSVTALSCPPLSP Trigger: GGGACTGAGTGGTGGACAGGAAAGAGCGGTCACGCTTGGTGACAACTGTGAGCAAATGGTCCACAGCTTTCCCTCTGTACATCTCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCCACCCCCATTCAGTGTCTGGAAACAGATTACAGATAAACCTACCACCATGGGAAATGTCCAACAGGTaGCATGAGCCAGGTATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PHPHSVSGNRLQINLPPWEMSNR*HEPGIL Trigger: TAGAATACCTGGCTCATGTCACCTGTTGGACATTTC...CCATGGTGGTAGGTTTATCTGTAATCTGTTTCCAGACACTGAATGGGGGTGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACCCCCATTCAGTGTCTGGAAACAGATTACAGATAAACCTACCACCATGGAGACAGAGGGAAAGCTGTaGACCATTTGCTCACAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PPPFSVWKQITDKPTTMETEGKL*TICSQL Trigger: CAACTGTGAGCAAATGGTCCACAGCTTTCCCTCTGT...CTCCATGGTGGTAGGTTTATCTGTAATCTGTTTCCAGACACTGAATGGGGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGAGATTTAAAGGTGAAGATCAGTCTGGGCTACAGCACCAAGACCCTGACTCCCCCATTCAGTGTCTaGAAACAGATTACAGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: AGDLKVKISLGYSTKTLTPPFSV*KQITDK Trigger: TTTATCTGTAATCTGTTTCCAGACACTGAATGGGGG...AGTCAGGGTCTTGGTGCTGTAGCCCAGACTGATCTTCACCTTTAAATCTCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR CCA 72 bp | GTCAGGCCCAGGGTGTACATCTGCATTTTCAGCCCTTaGGAGGCTGAGGCAGGAGATTTAAAGGTGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: VRPRVYICIFSP*EAEAGDLKVKI Trigger: GATCTTCACCTTTAAATCTCCTGCCTCAGCCTCCCAAGGGCTGAAAATGCAGATGTACACCCTGGGCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATTTAAAGGTGAAGATCAGTCTGGGCTACAGCACCAAGACCCTGACTCAGCATGATTTAATTTACTaGCTCCTCAATCCTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GDLKVKISLGYSTKTLTQHDLIY*LLNPQS Trigger: GGACTGAGGATTGAGGAGCAAGTAAATTAAATCATG...CTGAGTCAGGGTCTTGGTGCTGTAGCCCAGACTGATCTTCACCTTTAAATCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR TCA 72 bp | CCAGAAACAAGAATCCAAAAGGAAATGTCCAACAGGTaGCATGAGCCAGGTATTCTATGGCCTTCGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PETRIQKEMSNR*HEPGILWPSLF Trigger: AAACAGCGAAGGCCATAGAATACCTGGCTCATGTCACCTGTTGGACATTTCCTTTTGGATTCTTGTTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR TCA 72 bp | AACAAGAATCCAAAAGGAAATGTCCAACAGGTGACATaGGCCAGGTATTCTATGGCCTTCGCTGTTTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NKNPKGNVQQVT*ARYSMAFAVSV Trigger: AACTGAAACAGCGAAGGCCATAGAATACCTGGCTCATGTCACCTGTTGGACATTTCCTTTTGGATTCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTCCTGTCCACCACTCAGTCCCCACAAGTCACGCTTCTCACTTCCCCACGTGTGTTCATCTGCTTaGAGCCCCTCACCTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSCPPLSPHKSRFSLPHVCSSA*SPSPCV Trigger: AACGCAAGGTGAGGGGCTGCAAGCAGATGAACACAC...GTGGGGAAGTGAGAAGCGTGACTTGTGGGGACTGAGTGGTGGACAGGAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGATTTAAAGGTGAAGATCAGTCTGGGCTACAGCACCAAGACCCTGACTCCTGATGACCTCGTGTaGGTAAGCGATGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGDLKVKISLGYSTKTLTPDDLV*VSDAGG Trigger: GCCTCCTGCATCGCTTACCCACACGAGGTCATCAGG...AGTCAGGGTCTTGGTGCTGTAGCCCAGACTGATCTTCACCTTTAAATCTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| 3UTR CAA 72 bp | TGTACAGAGGGAAAGCTGTGGACCATTTGCTCACAGTaGTCACCAAGCGTGACCGCTCTTTCCTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CTEGKLWTICSQ*SPSVTALSCPP Trigger: TGGTGGACAGGAAAGAGCGGTCACGCTTGGTGACAACTGTGAGCAAATGGTCCACAGCTTTCCCTCTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR CCA 90 bp | CCCCATTCAGTGTCTGGAAACAGATTACAGATAAACCTACCACCATGGAGGGGGACACGCCGAGCACACTaGAGTGTGTTCATCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHSVSGNRLQINLPPWRGTRRAH*SVFICL Trigger: CAAGCAGATGAACACACTCCAGTGTGCTCGGCGTGT...CCCCCTCCATGGTGGTAGGTTTATCTGTAATCTGTTTCCAGACACTGAATGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAGATTTAAAGGTGAAGATCAGTCTGGGCTACAGCACCAAGACCCTGACAAAGTACACAGCCCTTaGTGGTGCAACTCCAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRRFKGEDQSGLQHQDPDKVHSP*WCNSNQ Trigger: TTGGTTGGAGTTGCACCATCAAGGGCTGTGTACTTT...GTCAGGGTCTTGGTGCTGTAGCCCAGACTGATCTTCACCTTTAAATCTCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR GCA 90 bp | CAGAAACAAGAATCCAAAAGGAAATGTCCAACAGGTGACATGAGCCAGGTATTCTGCAGCCCCTCACCTTaGGTTCTAGCTGCATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QKQESKRKCPTGDMSQVFCSPSP*VLAASS Trigger: CGAGGATGCAGCTAGAACGCAAGGTGAGGGGCTGCA...GAATACCTGGCTCATGTCACCTGTTGGACATTTCCTTTTGGATTCTTGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR GCA 90 bp | CCACCCCCATTCAGTGTCTGGAAACAGATTACAGATAAACCTACCACCATGGAGAGAAACAGCAGCAGCTaGCATGAGTCCAAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPFSVWKQITDKPTTMERNSSS*HESKEA Trigger: GGCTTCTTTGGACTCATGGCAGCTGCTGCTGTTTCT...CTCCATGGTGGTAGGTTTATCTGTAATCTGTTTCCAGACACTGAATGGGGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGAGATTTAAAGGTGAAGATCAGTCTGGGCTACAGCACCAAGACCCTGACCAAAGTACACAGCCCTaGATGGTGCAACTCCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRFKGEDQSGLQHQDPDQSTQP*MVQLQP Trigger: TGGTTGGAGTTGCACCATCAAGGGCTGTGTACTTTG...GTCAGGGTCTTGGTGCTGTAGCCCAGACTGATCTTCACCTTTAAATCTCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||
| CDS CCA 72 bp | CAAAGAAGCCAGAGGAACTTTTCTCAGCTCCATCTGTaGAGGAGACGATCGGAGCGTCTTTCAAACACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QRSQRNFSQLHL*RRRSERLSNTS Trigger: AGAAGTGTTTGAAAGACGCTCCGATCGTCTCCTCCACAGATGGAGCTGAGAAAAGTTCCTCTGGCTTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105686.3 |
||