Pregenerated sensors for SLC25A31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069041Ensembl transcript IDs: ENSMUST00000091184.9
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCTGGATCTGCCTGCTTCAGTCTCCTACAGTGCTAGGATTATGTaGACATTCCACCATATTCAGCTTGAAGACATCTTTTGTTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: TLDLPASVSYSARIM*TFHHIQLEDIFCWL Trigger: TAGCCAACAAAAGATGTCTTCAAGCTGAATATGGTGGAATGTGCACATAATCCTAGCACTGTAGGAGACTGAAGCAGGCAGATCCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR CCA 90 bp | TGTTGGCTAACTGTAAGCCAGCTCCACTTCAATAAAAATGTTCTATaGTGTGCTTATAAAGTTAGTGTGTGTGTCTGTGTGTGTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: CWLTVSQLHFNKNVL*CAYKVSVCVCVCPA Trigger: TGCAGGACACACACAGACACACACACTAACTTTATAAGCACACCATAGAACATTTTTATTGAAGTGGAGCTGGCTTACAGTTAGCCAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTCTGTGTGTGTCCTGCATaGGAGCTGGGGAAAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VSLGRQTGLNSGSACFSLCVCPA*ELGKKA Trigger: AGCCTTTTTCCCCAGCTCTCATGCAGGACACACACA...GAGACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTGTCCTGCATGAGAGCTaGGGAAAAAGGCTCATTACA | + |
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Preference number: 2 (lower is better) Translates to: RVSLGRQTGLNSGSACFSVLHES*GKRLIT Trigger: TGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGAC...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTCGAAGACATCTTTTGTTaGCTAACTGTAAGCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VSLGRQTGLNSGSACFSLEDIFC*LTVSQL Trigger: GAGCTGGCTTACAGTTAGCCAACAAAAGATGTCTTC...GAGACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAAGAAGGCAGACTGGCTTaGACTCTGGATCTGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: AQATGKCSTSLCQLVASQEGRLA*TLDLPA Trigger: AGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTC...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR-3UTR CAA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTTCCACCATATTCAGCTaGAAGACATCTTTTGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: RVSLGRQTGLNSGSACFSSTIFS*KTSFVG Trigger: GCCAACAAAAGATGTCTTCAAGCTGAATATGGTGGA...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR GCA 72 bp | CTGCCTGCTTCAGTCTCCTACAGTGCTAGGATTATGTaGACATTCCACCATATTCAGCTTGAAGACATCTTT | + |
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Preference number: 3 (lower is better) Translates to: LPASVSYSARIM*TFHHIQLEDIF Trigger: AAAGATGTCTTCAAGCTGAATATGGTGGAATGTGCACATAATCCTAGCACTGTAGGAGACTGAAGCAGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR TCA 72 bp | TATAAAGTTAGTGTGTGTGTCTGTGTGTGTCCTGCATaGGAGCTGGGGAAAAAGGCTCATTACAATAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: YKVSVCVCVCPA*ELGKKAHYNSF Trigger: AAAACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACACACACACTAACTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| 3UTR CCA 72 bp | ACATTCCACCATATTCAGCTTGAAGACATCTTTTGTTaGCTAACTGTAAGCCAGCTCCACTTCAATAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: TFHHIQLEDIFC*LTVSQLHFNKN Trigger: ATTTTTATTGAAGTGGAGCTGGCTTACAGTTAGCCAACAAAAGATGTCTTCAAGCTGAATATGGTGGAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCCAGGCAGTCCAGCATaGCCTTGTAGCGCGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RVSLGRQTGLNSGSACFSPGSPA*PCSAPQ Trigger: CTGAGGCGCGCTACAAGGGCATGCTGGACTGCCTGG...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTGCCTCAGGGCTTATCTaGTTGGAGGACGCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: RVSLGRQTGLNSGSACFSASGLI*LEDACT Trigger: GGTGCAGGCGTCCTCCAAGCAGATAAGCCCTGAGGC...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTCCTTGCTCACGAGGAATaGGCACCAGGCAGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSLGRQTGLNSGSACFSLLAHEE*APGSPA Trigger: TGCTGGACTGCCTGGTGCGCATTCCTCGTGAGCAAG...GAGACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTCCCAAAGCACCCCCTGTaGCACGAAGGATGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VSLGRQTGLNSGSACFSLPKHPL*HEGCWR Trigger: TCTCCAACATCCTTCGTGGCACAGGGGGTGCTTTGG...GAGACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAAGAGGACGCCTGCACCTaGAGCAGCAGCTTCACACGC | + |
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Preference number: 4 (lower is better) Translates to: AQATGKCSTSLCQLVASQEDACT*SSSFTR Trigger: GCGTGTGAAGCTGCTGCTGCAGGTGCAGGCGTCCTC...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTGTGTGTGTCCTGCATGAGAGCTGGGGAAAAAGGCTCATTACAATAGTTCAGGGCTTATCTGCTTaGAGGACGCCTGCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VSVCVLHESWGKRLITIVQGLSA*RTPAPA Trigger: TGCAGGTGCAGGCGTCCTCCAAGCAGATAAGCCCTG...AACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTCATGGTTCCTTTATATTaGCGATCAGATTCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: VSLGRQTGLNSGSACFSLMVPLY*RSDSPL Trigger: GAGTGGGGAATCTGATCGGCAATATAAAGGAACCAT...GAGACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTGTGTGTGTCCTGCATGAGAGCTGGGGAAAAAGGCTCATTACAATAGTTGAACAGCGCCTTCTTTaGAGACTGCTTCTTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSVCVLHESWGKRLITIVEQRLL*RLLLGG Trigger: TCCTCCAAGAAGCAGTCTTCAAAGAAGGCGCTGTTC...AACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTGTATCGAATAACATTTaGCAAATTGCCACGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: RVSLGRQTGLNSGSACFSVSNNI*QIATPI Trigger: TATTGGCGTGGCAATTTGGCAAATGTTATTCGATAC...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTCTCAGAAAGCAGTCTATaGTTCCTTTATATTGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: VSLGRQTGLNSGSACFSLSESSL*FLYIAD Trigger: ATCGGCAATATAAAGGAACCATAGACTGCTTTCTGA...GAGACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTGTGTGTGTCCTGCATGAGAGCTGGGGAAAAAGGCTCATTACAATAGTTTCAGATTCCCCACTCTaGATCATCATACGTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: VSVCVLHESWGKRLITIVSDSPL*IIIRLL Trigger: TAGAAGACGTATGATGATGCAGAGTGGGGAATCTGA...AACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTGTGTGTGTCCTGCATGAGAGCTGGGGAAAAAGGCTCATTACAATAGTTCACCTAATCGGGTTCTaGCAAAATCTAGTGGGTATA | + |
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Preference number: 4 (lower is better) Translates to: VSVCVLHESWGKRLITIVHLIGF*QNLVGI Trigger: TATACCCACTAGATTTTGCCAGAACCCGATTAGGTG...AACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CCA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAAGAGACACCAAACCCTTaGTATAGACCAATCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AQATGKCSTSLCQLVASQETPNP*YRPISP Trigger: TGGACTGATTGGTCTATACCAAGGGTTTGGTGTCTC...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR TCA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAACAGGTAGTCACGATTTaGGCAATGATAAAAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: AQATGKCSTSLCQLVASQQVVTI*AMIKET Trigger: TGTCTCTTTTATCATTGCTCAAATCGTGACTACCTG...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CCA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAAAAAAGAGACAAGAAATaGGGTTTCCTTTGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: AQATGKCSTSLCQLVASQKRDKK*GFLWLW Trigger: CCAAAGCCAAAGGAAACCCCATTTCTTGTCTCTTTT...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR TCA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAAACCAATCAGTCCATCTaGCTTGGCTATTTTCATAAT | + |
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Preference number: 4 (lower is better) Translates to: AQATGKCSTSLCQLVASQTNQSI*LGYFHN Trigger: ATTATGAAAATAGCCAAGTCAGATGGACTGATTGGT...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS GCA 90 bp | TTAAAAATCCTTGCTCACGAGGAATGCGCACCAGGCAGTCCAGCATaGCCTTGTAGCGCGCCTCAGGGCTTATCTGCTTGGAGGACGCCT | + |
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Preference number: 5 (lower is better) Translates to: LKILAHEECAPGSPA*PCSAPQGLSAWRTP Trigger: AGGCGTCCTCCAAGCAGATAAGCCCTGAGGCGCGCTACAAGGGCATGCTGGACTGCCTGGTGCGCATTCCTCGTGAGCAAGGATTTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CAA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTCTACACACAAGGATGTaGCTCCAGCAGCCCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RVSLGRQTGLNSGSACFSLHTRM*LQQPLQ Trigger: CTGGAGGGGCTGCTGGAGCAACATCCTTGTGTGTAG...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CAA 90 bp | AGGGTGTCTCTAGGAAGGCAGACTGGCTTGAACTCTGGATCTGCCTGCTTCAGTGTGCCACGAAGGATGTaGGAGAAGGCACCACGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RVSLGRQTGLNSGSACFSVPRRM*EKAPRK Trigger: CTTCCGTGGTGCCTTCTCCAACATCCTTCGTGGCAC...ACTGAAGCAGGCAGATCCAGAGTTCAAGCCAGTCTGCCTTCCTAGAGACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CCA 90 bp | CATATAACACCAAGACCAAAGCACCCCCTGTGCCACGAAGGATGTTaGAGAAGGCACCACGGAAGAAGGCAGGAACTCCTTCATGACGGT | + |
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Preference number: 5 (lower is better) Translates to: HITPRPKHPLCHEGC*RRHHGRRQELLHDG Trigger: ACCGTCATGAAGGAGTTCCTGCCTTCTTCCGTGGTGCCTTCTCCAACATCCTTCGTGGCACAGGGGGTGCTTTGGTCTTGGTGTTATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CAA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAACTCCAGAAGCCAGGTTaGCTAGAAACCATCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AQATGKCSTSLCQLVASQLQKPG*LETISR Trigger: TCTGGAGATGGTTTCTAGCAAACCTGGCTTCTGGAG...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CCA 90 bp | AGGCAGGAACTCCTTCATGACGGTAGATTTTCAGAAAGCAGTCTATaGTTCCTTTATATTGCCGATCAGATTCCCCACTCTGCATCATCA | + |
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Preference number: 5 (lower is better) Translates to: RQELLHDGRFSESSL*FLYIADQIPHSASS Trigger: TGATGATGCAGAGTGGGGAATCTGATCGGCAATATAAAGGAACCATAGACTGCTTTCTGAAAATCTACCGTCATGAAGGAGTTCCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CAA 90 bp | GTGTCTGTGTGTGTCCTGCATGAGAGCTGGGGAAAAAGGCTCATTACAATAGTTATCAGTCCATCTGACTaGGCTATTTTCATAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: VSVCVLHESWGKRLITIVISPSD*AIFIMQ Trigger: CTGCATTATGAAAATAGCCAAGTCAGATGGACTGAT...AACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CAA 90 bp | GTGTCTGTGTGTGTCCTGCATGAGAGCTGGGGAAAAAGGCTCATTACAATAGTTCCTCCAACATCAATGTaGAGGAACTCTTTGATTTTA | + |
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Preference number: 5 (lower is better) Translates to: VSVCVLHESWGKRLITIVPPTSM*RNSLIL Trigger: TAAAATCAAAGAGTTCCTCAACATTGATGTTGGAGG...AACTATTGTAATGAGCCTTTTTCCCCAGCTCTCATGCAGGACACACACAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS-3UTR CAA 90 bp | GCCCAAGCAACAGGAAAATGTTCTACTTCATTATGCCAACTTGTAGCCTCACAAACAGGTAGTCACGATTaGAGCAATGATAAAAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: AQATGKCSTSLCQLVASQTGSHD*SNDKRD Trigger: GTCTCTTTTATCATTGCTCAAATCGTGACTACCTGT...TTGTGAGGCTACAAGTTGGCATAATGAAGTAGAACATTTTCCTGTTGCTTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS GCA 72 bp | CTTGCTCACGAGGAATGCGCACCAGGCAGTCCAGCATaGCCTTGTAGCGCGCCTCAGGGCTTATCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LAHEECAPGSPA*PCSAPQGLSAW Trigger: CCAAGCAGATAAGCCCTGAGGCGCGCTACAAGGGCATGCTGGACTGCCTGGTGCGCATTCCTCGTGAGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CCA 72 bp | CCAAGACCAAAGCACCCCCTGTGCCACGAAGGATGTTaGAGAAGGCACCACGGAAGAAGGCAGGAACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PRPKHPLCHEGC*RRHHGRRQELL Trigger: AAGGAGTTCCTGCCTTCTTCCGTGGTGCCTTCTCCAACATCCTTCGTGGCACAGGGGGTGCTTTGGTCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CAA 72 bp | ACCAAGACCAAAGCACCCCCTGTGCCACGAAGGATGTaGGAGAAGGCACCACGGAAGAAGGCAGGAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: TKTKAPPVPRRM*EKAPRKKAGTP Trigger: AGGAGTTCCTGCCTTCTTCCGTGGTGCCTTCTCCAACATCCTTCGTGGCACAGGGGGTGCTTTGGTCTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS GCA 72 bp | TTCATAATGCAGTCACCCAAACCCGTGAACTGCCGCTaGTCAGGACCTTTTCCAATATCAACACCTAATCGG | + |
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Preference number: 6 (lower is better) Translates to: FIMQSPKPVNCR*SGPFPISTPNR Trigger: CCGATTAGGTGTTGATATTGGAAAAGGTCCTGAGCAGCGGCAGTTCACGGGTTTGGGTGACTGCATTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS GCA 72 bp | TTTTATCATATAACACCAAGACCAAAGCACCCCCTGTaGCACGAAGGATGTTGGAGAAGGCACCACGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FYHITPRPKHPL*HEGCWRRHHGR Trigger: TCTTCCGTGGTGCCTTCTCCAACATCCTTCGTGGCACAGGGGGTGCTTTGGTCTTGGTGTTATATGATAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CAA 90 bp | ACAGAGACACCAAACCCTTGGTATAGACCAATCAGTCCATCTGACTaGGCTATTTTCATAATGCAGTCACCCAAACCCGTGAACTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TETPNPWYRPISPSD*AIFIMQSPKPVNCR Trigger: GCGGCAGTTCACGGGTTTGGGTGACTGCATTATGAAAATAGCCAAGTCAGATGGACTGATTGGTCTATACCAAGGGTTTGGTGTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS GCA 72 bp | GCTATTTTCATAATGCAGTCACCCAAACCCGTGAACTaGCGCTGCTCAGGACCTTTTCCAATATCAACACCT | + |
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Preference number: 6 (lower is better) Translates to: AIFIMQSPKPVN*RCSGPFPISTP Trigger: AGGTGTTGATATTGGAAAAGGTCCTGAGCAGCGGCAGTTCACGGGTTTGGGTGACTGCATTATGAAAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CAA 72 bp | CCAAACCCTTGGTATAGACCAATCAGTCCATCTGACTaGGCTATTTTCATAATGCAGTCACCCAAACCCGTG | + |
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Preference number: 6 (lower is better) Translates to: PNPWYRPISPSD*AIFIMQSPKPV Trigger: CACGGGTTTGGGTGACTGCATTATGAAAATAGCCAAGTCAGATGGACTGATTGGTCTATACCAAGGGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS TCA 72 bp | TGTCATAAGCTCCAAAGTAAGAGGCTCGGTAAACAATaGTACCCTGAACAGAGACACCAAACCCTTGGTATA | + |
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Preference number: 6 (lower is better) Translates to: CHKLQSKRLGKQ*YPEQRHQTLGI Trigger: TATACCAAGGGTTTGGTGTCTCTGTTCAGGGTATCATTGTTTACCGAGCCTCTTACTTTGGAGCTTATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CCA 72 bp | CTCCTTCATGACGGTAGATTTTCAGAAAGCAGTCTATaGTTCCTTTATATTGCCGATCAGATTCCCCACTCT | + |
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Preference number: 6 (lower is better) Translates to: LLHDGRFSESSL*FLYIADQIPHS Trigger: AGAGTGGGGAATCTGATCGGCAATATAAAGGAACCATAGACTGCTTTCTGAAAATCTACCGTCATGAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CAA 72 bp | GTAGATTTTCAGAAAGCAGTCTATGGTTCCTTTATATaGCCGATCAGATTCCCCACTCTGCATCATCATACG | + |
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Preference number: 6 (lower is better) Translates to: VDFQKAVYGSFI*PIRFPTLHHHT Trigger: CGTATGATGATGCAGAGTGGGGAATCTGATCGGCAATATAAAGGAACCATAGACTGCTTTCTGAAAATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CAA 90 bp | TGTGTCAAAGGGATAGGAGAGTATTCCAGAACAGGTAGTCACGATTaGAGCAATGATAAAAGAGACAAGAAATGGGGTTTCCTTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CVKGIGEYSRTGSHD*SNDKRDKKWGFLWL Trigger: AAGCCAAAGGAAACCCCATTTCTTGTCTCTTTTATCATTGCTCAAATCGTGACTACCTGTTCTGGAATACTCTCCTATCCCTTTGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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| CDS CAA 90 bp | TTCATGACGGTAGATTTTCAGAAAGCAGTCTATGGTTCCTTTATATaGCCGATCAGATTCCCCACTCTGCATCATCATACGTCTTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: FMTVDFQKAVYGSFI*PIRFPTLHHHTSSN Trigger: GTTAGAAGACGTATGATGATGCAGAGTGGGGAATCTGATCGGCAATATAAAGGAACCATAGACTGCTTTCTGAAAATCTACCGTCATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091184.9 |
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