Pregenerated sensors for SLC25A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061904Ensembl transcript IDs: ENSMUST00000076694.13, ENSMUST00000163246.8, ENSMUST00000164505.2, ENSMUST00000170810.8
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACGCCCTTGTAGAACGCATTTAAGCCTTCCTCTTTATACATTTTaGGAACAGCTTCCCTCAAGGTGTTGGCATAACCAGGCTGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: QRPCRTHLSLPLYTF*EQLPSRCWHNQAGF Trigger: AAACCCAGCCTGGTTATGCCAACACCTTGAGGGAAGCTGTTCCCAAAATGTATAAAGAGGAAGGCTTAAATGCGTTCTACAAGGGCGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCGGGCGAAGAGCCCCTTCCACACACCTCTGAAGCCCAGCCTCTGCAGGACCATGCCTTTGTACTTCTaGGGGTCCACCTCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: IRAKSPFHTPLKPSLCRTMPLYF*GSTSWA Trigger: TGCCCAGGAGGTGGACCCTCAGAAGTACAAAGGCAT...GGTCCTGCAGAGGCTGGGCTTCAGAGGTGTGTGGAAGGGGCTCTTCGCCCGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAGAGACCACAGAGTCAGCAGGGTGGGAGACGATCGCACAGAAGACTCCTGCAGAGCCCTTGCATaGAATAGCCAATCAAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: QHRDHRVSRVGDDRTEDSCRALA*NSQSKL Trigger: CAACTTTGATTGGCTATTCCATGCAAGGGCTCTGCA...GGAGTCTTCTGTGCGATCGTCTCCCACCCTGCTGACTCTGTGGTCTCTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR-3UTR GCA 90 bp | AGACCACAGAGTCAGCAGGGTGGGAGACGATCGCACAGAAGACTCCAGCTATGTCACAACCAGCTGCTCTaGCTTTGTACATTCACTTCG | + |
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Preference number: 2 (lower is better) Translates to: RPQSQQGGRRSHRRLQLCHNQLL*LCTFTS Trigger: CGAAGTGAATGTACAAAGGCAGAGCAGCTGGTTGTG...ACATAGCTGGAGTCTTCTGTGCGATCGTCTCCCACCCTGCTGACTCTGTGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR TCA 72 bp | TTCCACACACCTCTGAAGCCCAGCCTCTGCAGGACCTaGGACGCGGTGCTGCCTTTCTCTTTATTCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: FHTPLKPSLCRT*DAVLPFSLFST Trigger: TGTGCTGAATAAAGAGAAAGGCAGCACCGCGTCTCAGGTCCTGCAGAGGCTGGGCTTCAGAGGTGTGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGAGACCACAGAGTCAGCAGGGTGGGAGACGATCGCACAGAAGACTCCGAATTTGCAGAGCCCTaGCATGGAATAGCCAATCAA | + |
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Preference number: 3 (lower is better) Translates to: QHRDHRVSRVGDDRTEDSEFAEP*HGIANQ Trigger: TTGATTGGCTATTCCATGCAAGGGCTCTGCAAATTC...GGAGTCTTCTGTGCGATCGTCTCCCACCCTGCTGACTCTGTGGTCTCTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR GCA 72 bp | GGAGACGATCGCACAGAAGACTCCAGCTATGTAACCTaGCACAAATGTCACAACCAGCTGCTCTGCCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: GDDRTEDSSYVT*HKCHNQLLCLC Trigger: ACAAAGGCAGAGCAGCTGGTTGTGACATTTGTGGCAGGTTACATAGCTGGAGTCTTCTGTGCGATCGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGCCAATCATGATGATTCGGGCGAAGAGCCCCTTCCACACACCTCTGAAGCCAGGTTTCCACACAGCTaGTTAGTAGCAGTCTATATC | + |
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Preference number: 3 (lower is better) Translates to: SANHDDSGEEPLPHTSEARFPHS*LVAVYI Trigger: GATATAGACTGCTACTAACAAGCTGTGTGGAAACCT...GGCTTCAGAGGTGTGTGGAAGGGGCTCTTCGCCCGAATCATCATGATTGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| 3UTR-3UTR CAA 90 bp | AGACCACAGAGTCAGCAGGGTGGGAGACGATCGCACAGAAGACTCCAGCTATGTTCCTCTTTATACATTTaGGGAACAGCTTCCCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: RPQSQQGGRRSHRRLQLCSSLYI*GTASLK Trigger: CTTGAGGGAAGCTGTTCCCAAAATGTATAAAGAGGA...ACATAGCTGGAGTCTTCTGTGCGATCGTCTCCCACCCTGCTGACTCTGTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| CDS-3UTR GCA 90 bp | CAGCACAGAGACCACAGAGTCAGCAGGGTGGGAGACGATCGCACAGAAGACTCCGCGGAGCTGGGGGACTaGGGGGACCCGACAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QHRDHRVSRVGDDRTEDSAELGD*GDPTGH Trigger: ATGGCCTGTCGGGTCCCCGCAGTCCCCCAGCTCCGC...GGAGTCTTCTGTGCGATCGTCTCCCACCCTGCTGACTCTGTGGTCTCTGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| CDS-3UTR GCA 90 bp | CAGCACAGAGACCACAGAGTCAGCAGGGTGGGAGACGATCGCACAGAAGACTCCCCATCGTGCACCAGCTaGAGGTGTGGCGCGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QHRDHRVSRVGDDRTEDSPSCTS*RCGALK Trigger: CTTCAACGCGCCACACCTGCAGCTGGTGCACGATGG...GGAGTCTTCTGTGCGATCGTCTCCCACCCTGCTGACTCTGTGGTCTCTGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGGAGCAACGCCCTTGTAGAACGCATTTAAGCCTTCCTCTTTATACATTTGCAGGTGTGGCGCGTTaGAGGGGTTCGCCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TEEQRPCRTHLSLPLYTFAGVAR*RGSPAP Trigger: TGGCGCGGGCGAACCCCTTCAACGCGCCACACCTGC...AAATGTATAAAGAGGAAGGCTTAAATGCGTTCTACAAGGGCGTTGCTCCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| CDS-3UTR TCA 90 bp | GTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGGCAGGTGTGGCGCGTTaGAGGGGTTCGCCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: VFENPRLFPKHRSFLSEGAGVAR*RGSPAP Trigger: TGGCGCGGGCGAACCCCTTCAACGCGCCACACCTGC...CCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | GTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGGCGGAGCTGGGGGACTaGGGGGACCCGACAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VFENPRLFPKHRSFLSEGAELGD*GDPTGH Trigger: ATGGCCTGTCGGGTCCCCGCAGTCCCCCAGCTCCGC...CCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR TCA 90 bp | GTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGCCTTCCACACACCTCTaGAGCCCAGCCTCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VFENPRLFPKHRSFLSEGPSTHL*SPASAG Trigger: TCCTGCAGAGGCTGGGCTTCAGAGGTGTGTGGAAGG...CCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR TCA 90 bp | CATGTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGAGCCTCTGCAGGACCTaGGACGCGGTGCTGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HVFENPRLFPKHRSFLSESLCRT*DAVLPF Trigger: GAAAGGCAGCACCGCGTCTCAGGTCCTGCAGAGGCT...CTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | CATGTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGCCATCGTGCACCAGCTaGAGGTGTGGCGCGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HVFENPRLFPKHRSFLSEPSCTS*RCGALK Trigger: CTTCAACGCGCCACACCTGCAGCTGGTGCACGATGG...CTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | TTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGACACCTGAGACGCGGTGCTaGCTTTCTCTTTATTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FENPRLFPKHRSFLSEGTPETRC*LSLYSA Trigger: TGCTGAATAAAGAGAAAGGCAGCACCGCGTCTCAGG...TGTCCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | TTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGACACACAACCAGCTGCTCTaGCTTTGTACATTCACTTCG | + |
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Preference number: 4 (lower is better) Translates to: FENPRLFPKHRSFLSEGTHNQLL*LCTFTS Trigger: CGAAGTGAATGTACAAAGGCAGAGCAGCTGGTTGTG...TGTCCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | GTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGTCCAGCTATGTAACCTaGCACAAATGTCACAACCAG | + |
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Preference number: 4 (lower is better) Translates to: VFENPRLFPKHRSFLSEGSSYVT*HKCHNQ Trigger: CTGGTTGTGACATTTGTGGCAGGTTACATAGCTGGA...CCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | CATGTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGACCAAAGCCACACAGTaGATAATACTTCATGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HVFENPRLFPKHRSFLSETKATQ*IILHGA Trigger: GGCTCCATGAAGTATTATGCACTGTGTGGCTTTGGT...CTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR CCA 90 bp | CATGTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGTGCAGAGCCCTTGCATaGAATAGCCAATCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HVFENPRLFPKHRSFLSECRALA*NSQSKL Trigger: CAACTTTGATTGGCTATTCCATGCAAGGGCTCTGCA...CTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR GCA 90 bp | CATGTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGAATGTCACAACCAGCTaGTCTGCCTTTGTACATTCA | + |
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Preference number: 4 (lower is better) Translates to: HVFENPRLFPKHRSFLSENVTTS*SAFVHS Trigger: TGAATGTACAAAGGCAGAGCAGCTGGTTGTGACATT...CTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR CAA 90 bp | CCTCTGCAGGACCTGAGACGCGGTGCTGCCTTTCTCTTTATTCAGCACAGAGACTGCAGGTGTGGCGCGTaGAAGGGGTTCGCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PLQDLRRGAAFLFIQHRDCRCGA*KGFARA Trigger: GGCGCGGGCGAACCCCTTCAACGCGCCACACCTGCA...GTCTCTGTGCTGAATAAAGAGAAAGGCAGCACCGCGTCTCAGGTCCTGCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163246.8 |
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| CDS-3UTR CAA 90 bp | GTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGTGCAGGTGTGGCGCGTaGAAGGGGTTCGCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: VFENPRLFPKHRSFLSEGCRCGA*KGFARA Trigger: GGCGCGGGCGAACCCCTTCAACGCGCCACACCTGCA...CCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR CAA 90 bp | TTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGACACCAGCTGCTCTGCCTTaGTACATTCACTTCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: FENPRLFPKHRSFLSEGTPAALP*YIHFGA Trigger: AGCCCCGAAGTGAATGTACAAAGGCAGAGCAGCTGG...TGTCCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR CAA 90 bp | TTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGGGGACAGAATTTGCAGAGCCCTaGCATGGAATAGCCAATCAA | + |
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Preference number: 5 (lower is better) Translates to: FENPRLFPKHRSFLSEGTEFAEP*HGIANQ Trigger: TTGATTGGCTATTCCATGCAAGGGCTCTGCAAATTC...TGTCCCCTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS-3UTR CAA 90 bp | CATGTTTTTGAAAACCCAAGACTATTTCCTAAACACAGGAGTTTCTTAAGTGAGTCCTCTTTATACATTTaGGGAACAGCTTCCCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: HVFENPRLFPKHRSFLSESSLYI*GTASLK Trigger: CTTGAGGGAAGCTGTTCCCAAAATGTATAAAGAGGA...CTCACTTAAGAAACTCCTGTGTTTAGGAAATAGTCTTGGGTTTTCAAAAACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076694.13 |
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| CDS CCA 72 bp | CAGCTATACTGCTCTTCCACGGCGGCGGCGGCCAGGTaGCGGGAACGCCGGGGCGGAGCTGGGGGACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: QLYCSSTAAAAR*RERRGGAGGLR Trigger: CCGCAGTCCCCCAGCTCCGCCCCGGCGTTCCCGCCACCTGGCCGCCGCCGCCGTGGAAGAGCAGTATAGCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163246.8 ENSMUST00000170810.8 |
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| CDS CCA 72 bp | TCACAACTGTACTCTTCCACGGCGGCGGCGGCCAGGTaGCGGGAACGCCGGGGCGGAGCTGGGGGACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: SQLYSSTAAAAR*RERRGGAGGLR Trigger: CCGCAGTCCCCCAGCTCCGCCCCGGCGTTCCCGCCACCTGGCCGCCGCCGCCGTGGAAGAGTACAGTTGTGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076694.13 ENSMUST00000164505.2 |
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| CDS GCA 72 bp | GGACTGCGGGGACCCGACAGGCCATCGTGCACCAGCTaGAGGTGTGGCGCGTTGAAGGGGTTCGCCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GLRGPDRPSCTS*RCGALKGFARA Trigger: GGCGCGGGCGAACCCCTTCAACGCGCCACACCTGCAGCTGGTGCACGATGGCCTGTCGGGTCCCCGCAGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076694.13 ENSMUST00000163246.8 ENSMUST00000164505.2 ENSMUST00000170810.8 |
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