Pregenerated sensors for SLC25A27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023912Ensembl transcript IDs: ENSMUST00000024705.6, ENSMUST00000233442.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCACATGGATGACGTCTATCCAGGCCTGGGATGCTGGCTGTCTCTaGTGCTCCTCTAAGGCAGATGCTGCTTCTGCACAGATCAGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: STWMTSIQAWDAGCL*CSSKADAASAQISS Trigger: GCTGCTGATCTGTGCAGAAGCAGCATCTGCCTTAGAGGAGCAGCAGAGACAGCCAGCATCCCAGGCCTGGATAGACGTCATCCATGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 90 bp | CAGATCAGCAGCTCAACGTCCAAACCTCCTGGCCCAAGGTCAAAGTaGTCTGGGTTCCATCCGTTAGCAAACGCCTTGCTGTGTCTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: QISSSTSKPPGPRSK*SGFHPLANALLCLS Trigger: ACTGAGACACAGCAAGGCGTTTGCTAACGGATGGAACCCAGACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTTGAGCTGCTGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 90 bp | AGATGCTGCTTCTGCACAGATCAGCAGCTCAACGTCCAAACCTCCTaGCCCAAGGTCAAAGTGGTCTGGGTTCCATCCGTTAGCAAACGC | + |
|
Preference number: 1 (lower is better) Translates to: RCCFCTDQQLNVQTS*PKVKVVWVPSVSKR Trigger: GCGTTTGCTAACGGATGGAACCCAGACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTTGAGCTGCTGATCTGTGCAGAAGCAGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 90 bp | CATGAAGAGCCCAAGAGTACTCACTCAGGCATAAGACAACATCCCTaGGGATGGGAAGACAAGGACCCTGGACACCTCCAATCCACGCTC | + |
|
Preference number: 1 (lower is better) Translates to: HEEPKSTHSGIRQHP*GWEDKDPGHLQSTL Trigger: GAGCGTGGATTGGAGGTGTCCAGGGTCCTTGTCTTCCCATCCCCAGGGATGTTGTCTTATGCCTGAGTGAGTACTCTTGGGCTCTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR TCA 90 bp | TTCCATCCGTTAGCAAACGCCTTGCTGTGTCTCAGTGGTTGGTCTTaGGAGATTGGACCAGACAGATTGCTCTTAGGTAAAAGGAGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: FHPLANALLCLSGWS*EIGPDRLLLGKRRS Trigger: ACTCCTCCTTTTACCTAAGAGCAATCTGTCTGGTCCAATCTCTCAAGACCAACCACTGAGACACAGCAAGGCGTTTGCTAACGGATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR TCA 90 bp | CGGCGAGCACTTGCCACACCACAGGCGAGGATGAGTAAGACTCAATaGTTAACACTCAGGTTTCTGAAAGTTTCACGACATCTGAGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: RRALATPQARMSKTQ*LTLRFLKVSRHLSS Trigger: AGAACTCAGATGTCGTGAAACTTTCAGAAACCTGAGTGTTAATCATTGAGTCTTACTCATCCTCGCCTGTGGTGTGGCAAGTGCTCGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR GCA 90 bp | CCCTTCCTGAAAAACAACAACAACCACAACAACACCCCCACCCTTTaGTCATGCCATAGTGCCGTAATCCACTTTAGGTGGTCTGTTTAT | + |
|
Preference number: 1 (lower is better) Translates to: PFLKNNNNHNNTPTL*SCHSAVIHFRWSVY Trigger: ATAAACAGACCACCTAAAGTGGATTACGGCACTATGGCATGAGCAAAGGGTGGGGGTGTTGTTGTGGTTGTTGTTGTTTTTCAGGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR CCA 90 bp | AACGCCCCGAGAGCTCAGTCTCAGACAAGTATATTGTGGTTCTCTTaGTTATGCTTCTCAGAGCTATGGGCCAATGTGGTTGTAATGGAA | + |
|
Preference number: 1 (lower is better) Translates to: NAPRAQSQTSILWFS*LCFSELWANVVVME Trigger: TTCCATTACAACCACATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTGAGACTGAGCTCTCGGGGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR TCA 90 bp | ATTGTTACACACATTGAAAGGGCCTTAAAAGTGTGCTTCCTCCTTTaGAGTGGCAGTGATTCTTCATCCGCTCATTCGTACAGCGCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: IVTHIERALKVCFLL*SGSDSSSAHSYSAD Trigger: GTCAGCGCTGTACGAATGAGCGGATGAAGAATCACTGCCACTTCAAAGGAGGAAGCACACTTTTAAGGCCCTTTCAATGTGTGTAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR GCA 90 bp | CTGAAAAACAACAACAACCACAACAACACCCCCACCCTTTGCTCATaGCATAGTGCCGTAATCCACTTTAGGTGGTCTGTTTATTTACTT | + |
|
Preference number: 1 (lower is better) Translates to: LKNNNNHNNTPTLCS*HSAVIHFRWSVYLL Trigger: AAGTAAATAAACAGACCACCTAAAGTGGATTACGGCACTATGGCATGAGCAAAGGGTGGGGGTGTTGTTGTGGTTGTTGTTGTTTTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCACTTGCCACACCACACGTCTATCCAGGCCTaGGATGCTGGCTGTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QRLERLPGTTDGEHLPHHTSIQA*DAGCLC Trigger: GCAGAGACAGCCAGCATCCCAGGCCTGGATAGACGT...GTGGTGTGGCAAGTGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CAA 90 bp | GCCGCTGCCGTGTCGGAGCATCTGCCCATCAGAGCAGCTATTCGGTaGGCTCTGAGATCTACCTTGGGCCTGAGTGGTCGGAGTTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AAAVSEHLPIRAAIR*ALRSTLGLSGRSFS Trigger: AGAAAAACTCCGACCACTCAGGCCCAAGGTAGATCTCAGAGCCAACCGAATAGCTGCTCTGATGGGCAGATGCTCCGACACGGCAGCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTCGGTTGGCTCTGAGATCTACCTTGGGCCTGAGTGGTCGGAGTTTTTCTTATCCAGGCCTGGGATaGTGGCTGTCTCTGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AIRLALRSTLGLSGRSFSYPGLG*WLSLLL Trigger: GAGCAGCAGAGACAGCCAGCATCCCAGGCCTGGATA...AGAAAAACTCCGACCACTCAGGCCCAAGGTAGATCTCAGAGCCAACCGAATAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR TCA 90 bp | ATAGCTTCTCTGCAACAGGCAGCAGCTGTAAATAAATGTCTTTCTCTGCATGTGCACCCGCCACCCCACTaGGCCTGGAAGAAGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: IASLQQAAAVNKCLSLHVHPPPH*AWKKAT Trigger: TGTGGCCTTCTTCCAGGCTCAGTGGGGTGGCGGGTG...CACATGCAGAGAAAGACATTTATTTACAGCTGCTGCCTGTTGCAGAGAAGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTGCAATCCAACATCACGGCGTGTGTCGCAGATaGTCTTGTTCAGTGACAATG | + |
|
Preference number: 2 (lower is better) Translates to: QRQQTQDQEASFLAIQHHGVCRR*SCSVTM Trigger: CATTGTCACTGAACAAGAGCATCTGCGACACACGCC...GTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAAAACAACAACAACCACAACAACACCCCCACCCTTTGCTCATGCCATAGTCAACATCCCTGGGGATaGGAAGACAAGGACCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LKNNNNHNNTPTLCSCHSQHPWG*EDKDPG Trigger: TCCAGGGTCCTTGTCTTCCCATCCCCAGGGATGTTG...ACTATGGCATGAGCAAAGGGTGGGGGTGTTGTTGTGGTTGTTGTTGTTTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGAGAAAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGATCAGAGGGAGCTCCATaGGGATTCCATAAAGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KERKGLDAKTGEATRDHGSEGAP*GFHKEI Trigger: TATCTCTTTATGGAATCCCCATGGAGCTCCCTCTGA...TCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTTTCTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CAA 90 bp | GAACGCCCCGAGAGCTCAGTCTCAGACAAGTATATTGTGGTTCTCTaGGTTATGCTTCTCAGAGCTATGGGCCAATGTGGTTGTAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERPESSVSDKYIVVL*VMLLRAMGQCGCNG Trigger: TCCATTACAACCACATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTGAGACTGAGCTCTCGGGGCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTGCAATCCAACATCACCAAGATGTTTATTCATaGCTTCTCATTTGCCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QRQQTQDQEASFLAIQHHQDVYS*LLICLC Trigger: ACAGAGGCAAATGAGAAGTCATGAATAAACATCTTG...GTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CCA 90 bp | TTCATGACTTCTCATTTGCCTCTGTGTAGATTACGATATGTGCACTCTACGAACAACGTCCAAACCTCCTaGCCCAAGGTCAAAGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FMTSHLPLCRLRYVHSTNNVQTS*PKVKVV Trigger: GACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTT...GTTCGTAGAGTGCACATATCGTAATCTACACAGAGGCAAATGAGAAGTCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR GCA 90 bp | AGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGAAAGAGATAAAGTGCTaGCCCCTGCAAATCGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RQVYCGSLGYASQSYGPMKEIKC*PLQIAV Trigger: GACTGCGATTTGCAGGGGGCAGCACTTTATCTCTTT...CATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR GCA 90 bp | AGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGTCTTTCCATCCTCCTTaGAGGAAAAGGTTAAGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: RQVYCGSLGYASQSYGPMSFHPP*RKRLSD Trigger: GTCGCTTAACCTTTTCCTGCAAGGAGGATGGAAAGA...CATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | AAGACAACATCCCTGGGGATGGGAAGACAAGGACCCTaGACACCTCCAATCCACGCTCCTCCCGAAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KTTSLGMGRQGP*TPPIHAPPEAG Trigger: GCCAGCTTCGGGAGGAGCGTGGATTGGAGGTGTCCAGGGTCCTTGTCTTCCCATCCCCAGGGATGTTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCAGCTGTGTCTCAGTGGTaGGTCTTGAGAGATTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: KGLDAKTGEATRDHGRRAAVSQW*VLRDWT Trigger: GGTCCAATCTCTCAAGACCAACCACTGAGACACAGC...TGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR GCA 72 bp | ACGTCTATCCAGGCCTGGGATGCTGGCTGTCTCTGCTaGTCCTCTAAGGCAGATGCTGCTTCTGCACAGATC | + |
|
Preference number: 3 (lower is better) Translates to: TSIQAWDAGCLC*SSKADAASAQI Trigger: GATCTGTGCAGAAGCAGCATCTGCCTTAGAGGAGCAGCAGAGACAGCCAGCATCCCAGGCCTGGATAGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | AGCTCAACGTCCAAACCTCCTGGCCCAAGGTCAAAGTaGTCTGGGTTCCATCCGTTAGCAAACGCCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSTSKPPGPRSK*SGFHPLANALL Trigger: CAGCAAGGCGTTTGCTAACGGATGGAACCCAGACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | TTCTGCACAGATCAGCAGCTCAACGTCCAAACCTCCTaGCCCAAGGTCAAAGTGGTCTGGGTTCCATCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: FCTDQQLNVQTS*PKVKVVWVPSV Trigger: AACGGATGGAACCCAGACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTTGAGCTGCTGATCTGTGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | AGTACTCACTCAGGCATAAGACAACATCCCTGGGGATaGGAAGACAAGGACCCTGGACACCTCCAATCCACG | + |
|
Preference number: 3 (lower is better) Translates to: STHSGIRQHPWG*EDKDPGHLQST Trigger: CGTGGATTGGAGGTGTCCAGGGTCCTTGTCTTCCCATCCCCAGGGATGTTGTCTTATGCCTGAGTGAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR CCA 72 bp | CCCAAGAGTACTCACTCAGGCATAAGACAACATCCCTaGGGATGGGAAGACAAGGACCCTGGACACCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PKSTHSGIRQHP*GWEDKDPGHLQ Trigger: TTGGAGGTGTCCAGGGTCCTTGTCTTCCCATCCCCAGGGATGTTGTCTTATGCCTGAGTGAGTACTCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCACTTGCCACACCACACAGAAAAGCGAGAGTaGTCAAACGGCAACAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRLERLPGTTDGEHLPHHTEKRE*SNGNNK Trigger: TTTATTGTTGCCGTTTGACAACTCTCGCTTTTCTGT...GTGGTGTGGCAAGTGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGGCTGACAGATGCAACAGAAAGGTGGGTAACCTGAAGATGTACAGGGATGCTCTGAGATCTACCTaGGGCCTGAGTGGTCGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQADRCNRKVGNLKMYRDALRST*GLSGRS Trigger: ACTCCGACCACTCAGGCCCAAGGTAGATCTCAGAGC...ATCCCTGTACATCTTCAGGTTACCCACCTTTCTGTTGCATCTGTCAGCCTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTGCAATCCAACATCACGTGTCGCAGATGCTCTaGTTCAGTGACAATGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRQQTQDQEASFLAIQHHVSQML*FSDNEH Trigger: GTGCTCATTGTCACTGAACAAGAGCATCTGCGACAC...GTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR TCA 72 bp | TGCAGGCTGACAGATGCAACAGAAAGGTGGGTAACCTaGAGATGTACAGGGATCAAACGCCACCTTCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: CRLTDATERWVT*RCTGIKRHLLS Trigger: CGACAGAAGGTGGCGTTTGATCCCTGTACATCTTCAGGTTACCCACCTTTCTGTTGCATCTGTCAGCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | GTTCCATCCGTTAGCAAACGCCTTGCTGTGTCTCAGTaGTTGGTCTTGAGAGATTGGACCAGACAGATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPSVSKRLAVSQ*LVLRDWTRQIA Trigger: AGCAATCTGTCTGGTCCAATCTCTCAAGACCAACCACTGAGACACAGCAAGGCGTTTGCTAACGGATGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | AACGCCCCGAGAGCTCAGTCTCAGACAAGTATATTGTaGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NAPRAQSQTSIL*FSWLCFSELWA Trigger: GGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTGAGACTGAGCTCTCGGGGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGAGAAAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGAATTGGACCAGACAGATaGCTCTTAGGTAAAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KERKGLDAKTGEATRDHGIGPDR*LLGKRR Trigger: CCTCCTTTTACCTAAGAGCAATCTGTCTGGTCCAAT...TCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTTTCTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGGCTGACAGATGCAACAGAAAGGTGGGTAACCTGAAGATGTACAGGGATTCTCAGTGGTTGGTCTaGAGAGATTGGACCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LQADRCNRKVGNLKMYRDSQWLV*RDWTRQ Trigger: CTGTCTGGTCCAATCTCTCAAGACCAACCACTGAGA...ATCCCTGTACATCTTCAGGTTACCCACCTTTCTGTTGCATCTGTCAGCCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR GCA 72 bp | AACAACAACCACAACAACACCCCCACCCTTTGCTCATaGCATAGTGCCGTAATCCACTTTAGGTGGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NNNHNNTPTLCS*HSAVIHFRWSV Trigger: AACAGACCACCTAAAGTGGATTACGGCACTATGGCATGAGCAAAGGGTGGGGGTGTTGTTGTGGTTGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR GCA 72 bp | AAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTaGAATCCAACATCACTTCAAGTTGCCTCTTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: KAADPGSRGLFP*NPTSLQVASFI Trigger: GATAAAAGAGGCAACTTGAAGTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR GCA 72 bp | AAAAACAACAACAACCACAACAACACCCCCACCCTTTaGTCATGCCATAGTGCCGTAATCCACTTTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KNNNNHNNTPTL*SCHSAVIHFRW Trigger: CCACCTAAAGTGGATTACGGCACTATGGCATGAGCAAAGGGTGGGGGTGTTGTTGTGGTTGTTGTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR CCA 72 bp | ATTCCCCTTAACGGGTATAGGCTCAGAGAAGTGATGTaGCTGACTGGCATTAAGCAAATGTTCCAGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: IPLNGYRLREVM*LTGIKQMFQRD Trigger: ATCCCTCTGGAACATTTGCTTAATGCCAGTCAGCCACATCACTTCTCTGAGCCTATACCCGTTAAGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR TCA 72 bp | TTAGCAAACGCCTTGCTGTGTCTCAGTGGTTGGTCTTaGGAGATTGGACCAGACAGATTGCTCTTAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LANALLCLSGWS*EIGPDRLLLGK Trigger: TTTACCTAAGAGCAATCTGTCTGGTCCAATCTCTCAAGACCAACCACTGAGACACAGCAAGGCGTTTGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGGATCAAACGCCACCTTCTGTCGGTAGAAAAGTGAGATTGTTACACACAATCTTTCCATCCTCCTaGCAGGAAAAGGTTAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: YRDQTPPSVGRKVRLLHTIFPSS*QEKVKR Trigger: TCGCTTAACCTTTTCCTGCAAGGAGGATGGAAAGAT...TGTGTGTAACAATCTCACTTTTCTACCGACAGAAGGTGGCGTTTGATCCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR TCA 72 bp | CTTGCCACACCACAGGCGAGGATGAGTAAGACTCAATaGTTAACACTCAGGTTTCTGAAAGTTTCACGACAT | + |
|
Preference number: 3 (lower is better) Translates to: LATPQARMSKTQ*LTLRFLKVSRH Trigger: ATGTCGTGAAACTTTCAGAAACCTGAGTGTTAATCATTGAGTCTTACTCATCCTCGCCTGTGGTGTGGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | TGCAATTGTATATCCAGGACCCACTACTGCATCAACTaGAATAATGCTGCCCCTACCTTGCATTTACCACAT | + |
|
Preference number: 3 (lower is better) Translates to: CNCISRTHYCIN*NNAAPTLHLPH Trigger: ATGTGGTAAATGCAAGGTAGGGGCAGCATTATTCCAGTTGATGCAGTAGTGGGTCCTGGATATACAATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR GCA 72 bp | AGGCCTCTTTCCTTGCAATCCAACATCACTTCAAGTTaGCTCTTTTATCTTTCCATCCTCCTTGCAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RPLSLQSNITSS*LFYLSILLAGK Trigger: TTTTCCTGCAAGGAGGATGGAAAGATAAAAGAGGCAACTTGAAGTGATGTTGGATTGCAAGGAAAGAGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR GCA 72 bp | AGATATTACTTAGCAACTCAATTGCAGGCTGACAGATaGAACAGAAAGGTGGGTAACCTGAAGATGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: RYYLATQLQADR*NRKVGNLKMYR Trigger: CCTGTACATCTTCAGGTTACCCACCTTTCTGTTGCATCTGTCAGCCTGCAATTGAGTTGCTAAGTAATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CCA 72 bp | ATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATaGGCCAATGTGGTTGTAATGGAATGTGTTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ILWFSWLCFSEL*ANVVVMECVPE Trigger: CTCTGGAACACATTCCATTACAACCACATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATTTCATGACTTCTCATTaGCCTCTGTGTAGATTACGA | + |
|
Preference number: 3 (lower is better) Translates to: QTSILWFSWLCFSELWANFMTSH*PLCRLR Trigger: TCGTAATCTACACAGAGGCAAATGAGAAGTCATGAA...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR TCA 72 bp | TCTTTCAGCACTAAGAAAACTCAAGATGTTTATTCATaGCTTCTCATTTGCCTCTGTGTAGATTACGATATG | + |
|
Preference number: 3 (lower is better) Translates to: SFSTKKTQDVYS*LLICLCVDYDM Trigger: CATATCGTAATCTACACAGAGGCAAATGAGAAGTCATGAATAAACATCTTGAGTTTTCTTAGTGCTGAAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCAAGGGGCAGAGTCCACTaGGCCATCTCCCAACCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLDAKTGEATRDHGRRARGRVH*AISQPS Trigger: GCTAGGTTGGGAGATGGCGCAGTGGACTCTGCCCCT...TGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCGGAGCATCTGCCCATCAGAGCAGCTATTCGGTTGGCTCTGAGATCTACCGGGCCGTGCGCACCATaGCCCTATAAGGGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSEHLPIRAAIRLALRSTGPCAP*PYKGQS Trigger: ACTCTGCCCCTTATAGGGGCATGGTGCGCACGGCCC...GGTAGATCTCAGAGCCAACCGAATAGCTGCTCTGATGGGCAGATGCTCCGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTGCAATCCAACATCACGTCCGGGGCCATCTCTaGGTGAGCGGCAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQQTQDQEASFLAIQHHVRGHL*VSGSSF Trigger: GAAGCTGCTGCCGCTCACGCAGAGATGGCCCCGGAC...GTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | AAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCAGGAGTCGGGTTTTTGTaGGATCGAGGGGAAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLDAKTGEATRDHGRRAGVGFL*DRGERL Trigger: CAACCTTTCCCCTCGATCTCACAAAAACCCGACTCC...TGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCACTTGCCACACCACCTGCTCTCTGAATATTaGGTATCCAGCCTGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRLERLPGTTDGEHLPHHLLSEY*VSSLPK Trigger: TTTGGGCAGGCTGGATACCCAATATTCAGAGAGCAG...GTGGTGTGGCAAGTGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGCTGACAGATGCAACAGAAAGGTGGGTAACCTGAAGATGTACAGGGATGGGGCCATCTCTGCGTaGGCGGCAGCAGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQADRCNRKVGNLKMYRDGAISA*AAAASP Trigger: AGGAGAAGCTGCTGCCGCTCACGCAGAGATGGCCCC...ATCCCTGTACATCTTCAGGTTACCCACCTTTCTGTTGCATCTGTCAGCCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | GCTATTCGGTTGGCTCTGAGATCTACCTTGGGCCTGAGTGGTCGGAGTTTTTCTCGGACAGTAGGAACTTaGTCGTCCGGGGCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIRLALRSTLGLSGRSFSRTVGT*SSGAIS Trigger: AGAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCG...AGAAAAACTCCGACCACTCAGGCCCAAGGTAGATCTCAGAGCCAACCGAATAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCACCTTCCATTTGCATCTaGACCTTCACAAGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLDAKTGEATRDHGRRAPSICI*TFTRSV Trigger: CACTGACCTTGTGAAGGTCCAGATGCAAATGGAAGG...TGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAGAAAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGAAGGAAGCCTTCCCCTTaGACAGCCTGGATCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KERKGLDAKTGEATRDHGRKPSP*TAWIKQ Trigger: CTGCTTGATCCAGGCTGTTCAAGGGGAAGGCTTCCT...TCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTTTCTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTGCAATCCAACATCACCTACGTGTCTGTAAATaGCGGGCGTCACTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQQTQDQEASFLAIQHHLRVCK*RASLLA Trigger: GGCAAGGAGTGACGCCCGCCATTTACAGACACGTAG...GTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCATGGATAAGCCGTGGGTaGAAATATTGTCTTCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KGLDAKTGEATRDHGRRAWISRG*KYCLQA Trigger: CGCTTGAAGACAATATTTCCACCCACGGCTTATCCA...TGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | GCTCAACGTCCAAACCTCCTGGCCCAAGGTCAAAGTGGTCTGGGTTCCATCCGTGTCCAGAACACAAACTaGATAAGCCGTGGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AQRPNLLAQGQSGLGSIRVQNTN*ISRGWK Trigger: TTTCCACCCACGGCTTATCCAGTTTGTGTTCTGGAC...ACGGATGGAACCCAGACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACGGCGAGCATTTGATGACATCGGCTaGTGTTCCCAGAATAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLDAKTGEATRDHGRRAFDDIG*CSQNRS Trigger: GCTTCTATTCTGGGAACACCAGCCGATGTCATCAAA...TGCTCGCCGTCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGCTGACAGATGCAACAGAAAGGTGGGTAACCTGAAGATGTACAGGGATAGGAAGCCTTCCTCCTaGACAATTCCCAGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQADRCNRKVGNLKMYRDRKPSS*TIPRAV Trigger: CACGGCCCTGGGAATTGTTCAGGAGGAAGGCTTCCT...ATCCCTGTACATCTTCAGGTTACCCACCTTTCTGTTGCATCTGTCAGCCTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | ATAGCTTCTCTGCAACAGGCAGCAGCTGTAAATAAATGTCTTTCTCTGCATGTGGTCCGGGGCCATCTCTaGGTGAGCGGCAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IASLQQAAAVNKCLSLHVVRGHL*VSGSSF Trigger: GAAGCTGCTGCCGCTCACGCAGAGATGGCCCCGGAC...CACATGCAGAGAAAGACATTTATTTACAGCTGCTGCCTGTTGCAGAGAAGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAGAAAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGAACAAGCGCTGCTCTCTaGATATTGGGTATCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KERKGLDAKTGEATRDHGTSAAL*ILGIQP Trigger: AGGCTGGATACCCAATATTCAGAGAGCAGCGCTTGT...TCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTTTCTCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | CTGAAAAACAACAACAACCACAACAACACCCCCACCCTTTGCTCATGCCATAGTCGGACAGTAGGAACTTaGTCGTCCGGGGCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNNHNNTPTLCSCHSRTVGT*SSGAIS Trigger: AGAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCG...ACTATGGCATGAGCAAAGGGTGGGGGTGTTGTTGTGGTTGTTGTTGTTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAGCAGACCCAGGATCAAGAGGCCTCTTTCCTTGCAATCCAACATCACCCTTCACAAGGTCAGTaGGGTTGGCTAAAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQQTQDQEASFLAIQHHPSQGQ*GWLKTV Trigger: GACAGTTTTTAGCCAACCCCACTGACCTTGTGAAGG...GTGATGTTGGATTGCAAGGAAAGAGGCCTCTTGATCCTGGGTCTGCTGCCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CAA 72 bp | CCATCCGTTAGCAAACGCCTTGCTGTGTCTCAGTGGTaGGTCTTGAGAGATTGGACCAGACAGATTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSVSKRLAVSQW*VLRDWTRQIAL Trigger: AAGAGCAATCTGTCTGGTCCAATCTCTCAAGACCAACCACTGAGACACAGCAAGGCGTTTGCTAACGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CAA 72 bp | CCCACTGAGCCTGGAAGAAGGCCACACTGGGGTTTTTaGCAATTGTATATCCAGGACCCACTACTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTEPGRRPHWGF*QLYIQDPLLHQ Trigger: TTGATGCAGTAGTGGGTCCTGGATATACAATTGCAAAAAACCCCAGTGTGGCCTTCTTCCAGGCTCAGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| 3UTR CAA 72 bp | ATCAGAGCAGCTATTCGGTTGGCTCTGAGATCTACCTaGGGCCTGAGTGGTCGGAGTTTTTCTAGTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: IRAAIRLALRST*GLSGRSFSSHI Trigger: GATATGACTAGAAAAACTCCGACCACTCAGGCCCAAGGTAGATCTCAGAGCCAACCGAATAGCTGCTCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATAATGCTGCCCCTACCTTGCATTTACCACATATAAAAATTACTTCTGGGGCCATCTCTGCGTaGGCGGCAGCAGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NWNNAAPTLHLPHIKITSGAISA*AAAASP Trigger: AGGAGAAGCTGCTGCCGCTCACGCAGAGATGGCCCC...AGAAGTAATTTTTATATGTGGTAAATGCAAGGTAGGGGCAGCATTATTCCAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTAGAAATAACAGGGGCGTGTGTCGCAGATGCTCTTGTTCAGTGACAATGCGTTTCCCTTCCATTTaGATCTGGACCTTCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRNNRGVCRRCSCSVTMRFPSI*IWTFTR Trigger: CCTTGTGAAGGTCCAGATGCAAATGGAAGGGAAACG...CATTGTCACTGAACAAGAGCATCTGCGACACACGCCCCTGTTATTTCTACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATCCATCATCCCTCCAATaGCCGATTTCCAGAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSILWFSWLCFSELWANPSSLQ*PISRGD Trigger: ATCCCCTCTGGAAATCGGTCATTGGAGGGATGATGG...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | TACAGGGATCAAACGCCACCTTCTGTCGGTAGAAAAGTGAGATTGTTACACACACTAAAAACTGTCCGATaGCACCAGCCATCATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRDQTPPSVGRKVRLLHTLKTVR*HQPSSL Trigger: GAGGGATGATGGCTGGTGTCATCGGACAGTTTTTAG...TGTGTGTAACAATCTCACTTTTCTACCGACAGAAGGTGGCGTTTGATCCCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGAGCCAGAACACCATTaGCCAAGGGGTCATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSILWFSWLCFSELWANEPEHH*PRGHSQ Trigger: CTGAGAATGACCCCTTGGTCAATGGTGTTCTGGCTC...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CAA 72 bp | GAGAGCTCAGTCTCAGACAAGTATATTGTGGTTCTCTaGGTTATGCTTCTCAGAGCTATGGGCCAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSVSDKYIVVL*VMLLRAMGQCG Trigger: ACCACATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTGAGACTGAGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | TTCATGACTTCTCATTTGCCTCTGTGTAGATTACGATATGTGCACTCTACGAACGTAGATGTTCATAGGTaGCCATCCGACCTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FMTSHLPLCRLRYVHSTNVDVHR*PSDLQS Trigger: ACTCTGGAGGTCGGATGGTCACCTATGAACATCTAC...GTTCGTAGAGTGCACATATCGTAATCTACACAGAGGCAAATGAGAAGTCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | TTCATGACTTCTCATTTGCCTCTGTGTAGATTACGATATGTGCACTCTACGAACAGGGCAGCTTCTCCTTaGATCTGGAGTCGGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMTSHLPLCRLRYVHSTNRAASP*IWSRVF Trigger: AAAAACCCGACTCCAGATGCAAGGAGAAGCTGCCCT...GTTCGTAGAGTGCACATATCGTAATCTACACAGAGGCAAATGAGAAGTCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CCA 90 bp | AGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGGCTTCTCCTTGCATCTaGAGTCGGGTTTTTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQVYCGSLGYASQSYGPMASPCI*SRVFVR Trigger: TCTCACAAAAACCCGACTCCAGATGCAAGGAGAAGC...CATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGCTTATCTTCACTTTTaGCAAACACGACTTCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTSILWFSWLCFSELWANAYLHF*QTRLPV Trigger: TACGGGAAGTCGTGTTTGGCAAAAGTGAAGATAAGC...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGATTTTTGCAAATGCATaGTGTACTCCACGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQVYCGSLGYASQSYGPMIFANA*CTPRNL Trigger: GAGATTCCGTGGAGTACATCATGCATTTGCAAAAAT...CATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| 3UTR CAA 72 bp | CACTACTGCATCAACTGGAATAATGCTGCCCCTACCTaGCATTTACCACATATAAAAATTACTTCTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HYCINWNNAAPT*HLPHIKITSQN Trigger: ATTCTGAGAAGTAATTTTTATATGTGGTAAATGCAAGGTAGGGGCAGCATTATTCCAGTTGATGCAGTAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS TCA 90 bp | ATCCTTGCGAGGGTCCAACCTCTGAAGATGCACTCCAGCCAGGAGTaGGGCTGCCCGCCCATCCCTCCCCCAGCACGATGCCGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILARVQPLKMHSSQE*GCPPIPPPARCRSH Trigger: GTGGCTGCGGCATCGTGCTGGGGGAGGGATGGGCGGGCAGCCTCACTCCTGGCTGGAGTGCATCTTCAGAGGTTGGACCCTCGCAAGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS GCA 90 bp | TCCCAGGGCCGTGCGCACCATGCCCCTATAAGGGGCAGAGTCCACTaGGCCATCTCCCAACCTAGCAAGGGCAGCTTCTCCTTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQGRAHHAPIRGRVH*AISQPSKGSFSLHL Trigger: CAGATGCAAGGAGAAGCTGCCCTTGCTAGGTTGGGAGATGGCGCAGTGGACTCTGCCCCTTATAGGGGCATGGTGCGCACGGCCCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | AACATCCCTGGGGATGGGAAGACAAGGACCCTGGACACCTCCAATCCACGCTCCCCGGACAGTAGGAACTaGCTCGTCCGGGGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: NIPGDGKTRTLDTSNPRSPDSRN*LVRGHL Trigger: GAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCGG...GGAGCGTGGATTGGAGGTGTCCAGGGTCCTTGTCTTCCCATCCCCAGGGATGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS GCA 90 bp | GCCACAGCTTTAGGAAGCCTTCCTCCTGAACAATTCCCAGGGCCGTaGGCACCATGCCCCTATAAGGGGCAGAGTCCACTGCGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATALGSLPPEQFPGP*APCPYKGQSPLRHL Trigger: GAGATGGCGCAGTGGACTCTGCCCCTTATAGGGGCATGGTGCGCACGGCCCTGGGAATTGTTCAGGAGGAAGGCTTCCTAAAGCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATCTAGCTCGGCCACGGTaGCGGCGCAGCCGGACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QTSILWFSWLCFSELWANLARPR*RRSRTV Trigger: TACTGTCCGGCTGCGCCGCAACCGTGGCCGAGCTAG...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | ATAGCTTCTCTGCAACAGGCAGCAGCTGTAAATAAATGTCTTTCTCTGCATGTGCTAGCTCGGCCACGGTaGCGGCGCAGCCGGACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IASLQQAAAVNKCLSLHVLARPR*RRSRTV Trigger: TACTGTCCGGCTGCGCCGCAACCGTGGCCGAGCTAG...CACATGCAGAGAAAGACATTTATTTACAGCTGCTGCCTGTTGCAGAGAAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAACGTCCAAACCTCCTGGCCCAAGGTCAAAGTGGTCTGGGTTCCATCCGTAGTCCCCTTCCTTGTTaGTCTCGAGGTTGGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: AQRPNLLAQGQSGLGSIRSPLPC*SRGWFI Trigger: AATGAACCAACCTCGAGACAAACAAGGAAGGGGACT...ACGGATGGAACCCAGACCACTTTGACCTTGGGCCAGGAGGTTTGGACGTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 90 bp | AAGTGGTTAGATCTCCCATGTTCACAAGCGCTGCTCTCTGAATATTaGGTATCCAGCCTGCCCAAAGCCCGCGGATTCCTCCTTCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KWLDLPCSQALLSEY*VSSLPKARGFLLQL Trigger: TAGCTGAAGGAGGAATCCGCGGGCTTTGGGCAGGCTGGATACCCAATATTCAGAGAGCAGCGCTTGTGAACATGGGAGATCTAACCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATCCGGACAGTAGGAACTaGCTCGTCCGGGGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTSILWFSWLCFSELWANPDSRN*LVRGHL Trigger: GAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCGG...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGAAAAGGACTGGATGCAAAGACTGGAGAGGCTACCAGGGACCACGGACAAAAGTCCCCTTCCTaGTTTGTCTCGAGGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KERKGLDAKTGEATRDHGQKSPS*FVSRLV Trigger: AACCAACCTCGAGACAAACAAGGAAGGGGACTTTTG...TCCGTGGTCCCTGGTAGCCTCTCCAGTCTTTGCATCCAGTCCTTTTCTCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS TCA 90 bp | TATCTTCACTTTTGCCAAACACGACTTCCCGTAGATGTTCATAGGTaGCCATCCGACCTCCAGAGTACACTACGTGTCTGTAAATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YLHFCQTRLPVDVHR*PSDLQSTLRVCKWR Trigger: CCGCCATTTACAGACACGTAGTGTACTCTGGAGGTCGGATGGTCACCTATGAACATCTACGGGAAGTCGTGTTTGGCAAAAGTGAAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS TCA 90 bp | CACGAGGGTAGAAAGCCTTTATACAGGCTCAGGAAGCCTTCCCCTTaGACAGCCTGGATCAAGCAGTCAGCTGATGACTTATACAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HEGRKPLYRLRKPSP*TAWIKQSADDLYKS Trigger: ACTTTTGTATAAGTCATCAGCTGACTGCTTGATCCAGGCTGTTCAAGGGGAAGGCTTCCTGAGCCTGTATAAAGGCTTTCTACCCTCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | TACAGGGATCAAACGCCACCTTCTGTCGGTAGAAAAGTGAGATTGTTACACACAAAGGGCAGCTTCTCCTaGCATCTGGAGTCGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YRDQTPPSVGRKVRLLHTKGSFS*HLESGF Trigger: AAAACCCGACTCCAGATGCAAGGAGAAGCTGCCCTT...TGTGTGTAACAATCTCACTTTTCTACCGACAGAAGGTGGCGTTTGATCCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | AGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATGCAGGAAGCCTTCCCCTaGAACAGCCTGGATCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQVYCGSLGYASQSYGPMQEAFP*NSLDQA Trigger: TGCTTGATCCAGGCTGTTCAAGGGGAAGGCTTCCTG...CATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 90 bp | CAAGCGGTGTGTTCAATACCAGGTAGTGTTTCACTGTGTCGTAAGTaGTTAGATCTCCCATGTTCACAAGCGCTGCTCTCTGAATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAVCSIPGSVSLCRK*LDLPCSQALLSEYW Trigger: CCAATATTCAGAGAGCAGCGCTTGTGAACATGGGAGATCTAACCACTTACGACACAGTGAAACACTACCTGGTATTGAACACACCGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 90 bp | TTTGTCTCGAGGTTGGTTCATTATTCGGCTTTTGATGACATCGGCTaGTGTTCCCAGAATAGAAGCCACAAGTCCAGAACACAAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FVSRLVHYSAFDDIG*CSQNRSHKSRTQTG Trigger: TCCAGTTTGTGTTCTGGACTTGTGGCTTCTATTCTGGGAACACCAGCCGATGTCATCAAAAGCCGAATAATGAACCAACCTCGAGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATACAAGGTCAGTGGGGTaGGCTAAAAACTGTCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QTSILWFSWLCFSELWANTRSVG*AKNCPM Trigger: CATCGGACAGTTTTTAGCCAACCCCACTGACCTTGT...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | TTCATGACTTCTCATTTGCCTCTGTGTAGATTACGATATGTGCACTCTACGAACTGCTTATCTTCACTTTaGCCAAACACGACTTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: FMTSHLPLCRLRYVHSTNCLSSL*PNTTSR Trigger: ACGGGAAGTCGTGTTTGGCAAAAGTGAAGATAAGCA...GTTCGTAGAGTGCACATATCGTAATCTACACAGAGGCAAATGAGAAGTCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATATTGTGGTTCTCTTGGTTATGCTTCTCAGAGCTATGGGCCAATTTCATTATTCGGCTTTaGATGACATCGGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QTSILWFSWLCFSELWANFIIRL*MTSAGV Trigger: AACACCAGCCGATGTCATCAAAAGCCGAATAATGAA...ATTGGCCCATAGCTCTGAGAAGCATAACCAAGAGAACCACAATATACTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 72 bp | CGAGGCGGGGGCGGCCGGTACCTAGCTCGGCCACGGTaGCGGCGCAGCCGGACAGTAGGAACTTGCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGGGGRYLARPR*RRSRTVGTCSS Trigger: GGACGAGCAAGTTCCTACTGTCCGGCTGCGCCGCAACCGTGGCCGAGCTAGGTACCGGCCGCCCCCGCCTCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS CAA 90 bp | GTTGCTAGCTCGGCCACGGTTGCGGCGCAGCCGGACAGTAGGAACTaGCTCGTCCGGGGCCATCTCTGCGTGAGCGGCAGCAGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VASSATVAAQPDSRN*LVRGHLCVSGSSFS Trigger: GGAGAAGCTGCTGCCGCTCACGCAGAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCGGCTGCGCCGCAACCGTGGCCGAGCTAGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 90 bp | GTACCTAGCTCGGCCACGGTTGCGGCGCAGCCGGACAGTAGGAACTaGCTCGTCCGGGGCCATCTCTGCGTGAGCGGCAGCAGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VPSSATVAAQPDSRN*LVRGHLCVSGSSFS Trigger: GGAGAAGCTGCTGCCGCTCACGCAGAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCGGCTGCGCCGCAACCGTGGCCGAGCTAGGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS TCA 72 bp | AGGGTCCAACCTCTGAAGATGCACTCCAGCCAGGAGTaGGGCTGCCCGCCCATCCCTCCCCCAGCACGATGC | + |
|
Preference number: 6 (lower is better) Translates to: RVQPLKMHSSQE*GCPPIPPPARC Trigger: GCATCGTGCTGGGGGAGGGATGGGCGGGCAGCCTCACTCCTGGCTGGAGTGCATCTTCAGAGGTTGGACCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233442.2 |
||
| CDS GCA 72 bp | CCGGACAGTAGGAACTTGCTCGTCCGGGGCCATCTCTaGGTGAGCGGCAGCAGCTTCTCCTCCTCGGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: PDSRNLLVRGHL*VSGSSFSSSAI Trigger: TATCGCCGAGGAGGAGAAGCTGCTGCCGCTCACGCAGAGATGGCCCCGGACGAGCAAGTTCCTACTGTCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024705.6 ENSMUST00000233442.2 |
||
| CDS GCA 72 bp | CTTCCTCCTGAACAATTCCCAGGGCCGTGCGCACCATaGCCCTATAAGGGGCAGAGTCCACTGCGCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPPEQFPGPCAP*PYKGQSPLRHL Trigger: GAGATGGCGCAGTGGACTCTGCCCCTTATAGGGGCATGGTGCGCACGGCCCTGGGAATTGTTCAGGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS TCA 72 bp | GGGCAGCTTCTCCTTGCATCTGGAGTCGGGTTTTTGTaGGATCGAGGGGAAAGGTTGCTAGCTCGGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GQLLLASGVGFL*DRGERLLARPR Trigger: CCGTGGCCGAGCTAGCAACCTTTCCCCTCGATCTCACAAAAACCCGACTCCAGATGCAAGGAGAAGCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS GCA 72 bp | TTAGGAAGCCTTCCTCCTGAACAATTCCCAGGGCCGTaGGCACCATGCCCCTATAAGGGGCAGAGTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LGSLPPEQFPGP*APCPYKGQSPL Trigger: CAGTGGACTCTGCCCCTTATAGGGGCATGGTGCGCACGGCCCTGGGAATTGTTCAGGAGGAAGGCTTCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 72 bp | TGCGCCATCTCCCAACCTAGCAAGGGCAGCTTCTCCTaGCATCTGGAGTCGGGTTTTTGTGAGATCGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CAISQPSKGSFS*HLESGFCEIEG Trigger: CCCCTCGATCTCACAAAAACCCGACTCCAGATGCAAGGAGAAGCTGCCCTTGCTAGGTTGGGAGATGGCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 90 bp | AGAGTCCACTGCGCCATCTCCCAACCTAGCAAGGGCAGCTTCTCCTaGCATCTGGAGTCGGGTTTTTGTGAGATCGAGGGGAAAGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVHCAISQPSKGSFS*HLESGFCEIEGKGC Trigger: GCAACCTTTCCCCTCGATCTCACAAAAACCCGACTCCAGATGCAAGGAGAAGCTGCCCTTGCTAGGTTGGGAGATGGCGCAGTGGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS TCA 72 bp | GTGGTTAGATCTCCCATGTTCACAAGCGCTGCTCTCTaGATATTGGGTATCCAGCCTGCCCAAAGCCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVRSPMFTSAAL*ILGIQPAQSPR Trigger: CCGCGGGCTTTGGGCAGGCTGGATACCCAATATTCAGAGAGCAGCGCTTGTGAACATGGGAGATCTAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | CCATCCGACCTCCAGAGTACACTACGTGTCTGTAAATaGCGGGCGTCACTCCTTGCCACAGCTTTAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSDLQSTLRVCK*RASLLATALGS Trigger: GCTTCCTAAAGCTGTGGCAAGGAGTGACGCCCGCCATTTACAGACACGTAGTGTACTCTGGAGGTCGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | GATCTCCCATGTTCACAAGCGCTGCTCTCTGAATATTaGGTATCCAGCCTGCCCAAAGCCCGCGGATTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLPCSQALLSEY*VSSLPKARGFL Trigger: GAGGAATCCGCGGGCTTTGGGCAGGCTGGATACCCAATATTCAGAGAGCAGCGCTTGTGAACATGGGAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | TCTCCCAACCTAGCAAGGGCAGCTTCTCCTTGCATCTaGAGTCGGGTTTTTGTGAGATCGAGGGGAAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPNLARAASPCI*SRVFVRSRGKV Trigger: AACCTTTCCCCTCGATCTCACAAAAACCCGACTCCAGATGCAAGGAGAAGCTGCCCTTGCTAGGTTGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 90 bp | CGTTTCCCTTCCATTTGCATCTGGACCTTCACAAGGTCAGTGGGGTaGGCTAAAAACTGTCCGATGACACCAGCCATCATCCCTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RFPSICIWTFTRSVG*AKNCPMTPAIIPPM Trigger: CATTGGAGGGATGATGGCTGGTGTCATCGGACAGTTTTTAGCCAACCCCACTGACCTTGTGAAGGTCCAGATGCAAATGGAAGGGAAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 72 bp | TCCATTTGCATCTGGACCTTCACAAGGTCAGTGGGGTaGGCTAAAAACTGTCCGATGACACCAGCCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SICIWTFTRSVG*AKNCPMTPAII Trigger: GATGATGGCTGGTGTCATCGGACAGTTTTTAGCCAACCCCACTGACCTTGTGAAGGTCCAGATGCAAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS TCA 72 bp | TTTTGCCAAACACGACTTCCCGTAGATGTTCATAGGTaGCCATCCGACCTCCAGAGTACACTACGTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCQTRLPVDVHR*PSDLQSTLRVC Trigger: ACAGACACGTAGTGTACTCTGGAGGTCGGATGGTCACCTATGAACATCTACGGGAAGTCGTGTTTGGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 90 bp | AGTCCCCTTCCTTGTTTGTCTCGAGGTTGGTTCATTATTCGGCTTTaGATGACATCGGCTGGTGTTCCCAGAATAGAAGCCACAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLPCLSRGWFIIRL*MTSAGVPRIEATSP Trigger: TGGACTTGTGGCTTCTATTCTGGGAACACCAGCCGATGTCATCAAAAGCCGAATAATGAACCAACCTCGAGACAAACAAGGAAGGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CAA 72 bp | CCTTGTTTGTCTCGAGGTTGGTTCATTATTCGGCTTTaGATGACATCGGCTGGTGTTCCCAGAATAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PCLSRGWFIIRL*MTSAGVPRIEA Trigger: GGCTTCTATTCTGGGAACACCAGCCGATGTCATCAAAAGCCGAATAATGAACCAACCTCGAGACAAACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | TGTTCAATACCAGGTAGTGTTTCACTGTGTCGTAAGTaGTTAGATCTCCCATGTTCACAAGCGCTGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSIPGSVSLCRK*LDLPCSQALLS Trigger: AGAGAGCAGCGCTTGTGAACATGGGAGATCTAACCACTTACGACACAGTGAAACACTACCTGGTATTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | CCACAAGTCCAGAACACAAACTGGATAAGCCGTGGGTaGAAATATTGTCTTCAAGCGGTGTGTTCAATACCA | + |
|
Preference number: 6 (lower is better) Translates to: PQVQNTNWISRG*KYCLQAVCSIP Trigger: TGGTATTGAACACACCGCTTGAAGACAATATTTCCACCCACGGCTTATCCAGTTTGTGTTCTGGACTTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | GAAGCCACAAGTCCAGAACACAAACTGGATAAGCCGTaGGTGGAAATATTGTCTTCAAGCGGTGTGTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: EATSPEHKLDKP*VEILSSSGVFN Trigger: ATTGAACACACCGCTTGAAGACAATATTTCCACCCACGGCTTATCCAGTTTGTGTTCTGGACTTGTGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||
| CDS CCA 72 bp | AGGTTGGTTCATTATTCGGCTTTTGATGACATCGGCTaGTGTTCCCAGAATAGAAGCCACAAGTCCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: RLVHYSAFDDIG*CSQNRSHKSRT Trigger: TGTTCTGGACTTGTGGCTTCTATTCTGGGAACACCAGCCGATGTCATCAAAAGCCGAATAATGAACCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024705.6 |
||