Pregenerated sensors for SLC25A24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040322Ensembl transcript IDs: ENSMUST00000029477.11, ENSMUST00000140786.3
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAGATATGCCCACCTCTGCCTCCTaGGTGCTAGAACTAAAGGCATGTGCCAATATTGCCAGGCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: DQAGLKLRDMPTSAS*VLELKACANIARLR Trigger: TCTTAGCCTGGCAATATTGGCACATGCCTTTAGTTCTAGCACTCAGGAGGCAGAGGTGGGCATATCTCTGAGTTTGAGGCCAGCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCAAACTCAGAGATATGCCCACCTCTaGCTCCTGAGTGCTAGAACTAAAGGCATGTGCCAATATTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPQTQRYAHL*LLSARTKGMCQYCQ Trigger: CTGGCAATATTGGCACATGCCTTTAGTTCTAGCACTCAGGAGGCAGAGGTGGGCATATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR TCA 90 bp | CCGCTGAATGTGCCTTCTATAATTCATTCCTATTCTGCTTACAGATaGGGAGATAAACTGTGCAAAGTAGACTTTGAATATAGTGATTTT | + |
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Preference number: 1 (lower is better) Translates to: PLNVPSIIHSYSAYR*GDKLCKVDFEYSDF Trigger: AAAATCACTATATTCAAAGTCTACTTTGCACAGTTTATCTCCTCATCTGTAAGCAGAATAGGAATGAATTATAGAAGGCACATTCAGCGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 90 bp | ACACTCTTCCCTTTGGCGAGGCAAACAGCTTCCTTTGTGATAGACTaGATGCAACCCCAGAAGTCACTGGAGAGCACTGACAGTCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: TLFPLARQTASFVID*MQPQKSLESTDSLG Trigger: ACCGAGACTGTCAGTGCTCTCCAGTGACTTCTGGGGTTGCATCAAGTCTATCACAAAGGAAGCTGTTTGCCTCGCCAAAGGGAAGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCGCTGAATGTGCCTTCTATAATTCATTCCTATTCTGCTTACAGATGAGGAACCCCAGAAGTCACTaGAGAGCACTGACAGTCTCG | + |
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Preference number: 2 (lower is better) Translates to: LSAECAFYNSFLFCLQMRNPRSH*RALTVS Trigger: CGAGACTGTCAGTGCTCTCCAGTGACTTCTGGGGTT...CCTCATCTGTAAGCAGAATAGGAATGAATTATAGAAGGCACATTCAGCGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 90 bp | ACTACTATTGAAGTGTGCTGGTGCCTTAGCTTTGTGCCGCTCCATTaGAGAAGCACAGGTTCAAAGACCTCAACAGTAAGAGGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: TTIEVCWCLSFVPLH*RSTGSKTSTVRGKQ Trigger: TTGTTTCCCTCTTACTGTTGAGGTCTTTGAACCTGTGCTTCTCAAATGGAGCGGCACAAAGCTAAGGCACCAGCACACTTCAATAGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 90 bp | AGGGTGCAGGGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTaGTGGTTTCTTCACTTACTGGAACTACGATTCAGAGCATCGCTG | + |
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Preference number: 2 (lower is better) Translates to: RVQGRDLYQQKYSTI*WFLHLLELRFRASL Trigger: CAGCGATGCTCTGAATCGTAGTTCCAGTAAGTGAAGAAACCACAAAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCCCTGCACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGAGGGAAACAAGGGTTTATTTACCTGAACTTGACACTCAAGTAGGAGAAAAGAAGCATGCCCACTaGAATAAGCATTACCTCACG | + |
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Preference number: 2 (lower is better) Translates to: SKRETRVYLPELDTQVGEKKHAH*NKHYLT Trigger: CGTGAGGTAATGCTTATTTCAGTGGGCATGCTTCTT...TTCTCCTACTTGAGTGTCAAGTTCAGGTAAATAAACCCTTGTTTCCCTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR-3UTR TCA 90 bp | GTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACACAGGCCATCTTTCTTTGTGCCGCTCCATTTaGGAAGCACAGGTTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VQTKLCFRISFINTGHLSLCRSI*EAQVQR Trigger: TCTTTGAACCTGTGCTTCTCAAATGGAGCGGCACAA...AGAAAGATGGCCTGTGTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAGACCTCAACAGTAAGAGGGAAACAAGGGTTTATTTACCTGAACTTGACTATTCTGCTTACAGATaGGGAGATAAACTGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FKDLNSKRETRVYLPELDYSAYR*GDKLCK Trigger: TTTGCACAGTTTATCTCCTCATCTGTAAGCAGAATA...GTCAAGTTCAGGTAAATAAACCCTTGTTTCCCTCTTACTGTTGAGGTCTTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 90 bp | GAACAAAACCAAGATGCTCACTGGGAAATGGTACAAGTCACAGTTTaGTTCATTGATGCTTTTCAAAGTGATGACCGAATAAATATGATC | + |
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Preference number: 2 (lower is better) Translates to: EQNQDAHWEMVQVTV*FIDAFQSDDRINMI Trigger: GATCATATTTATTCGGTCATCACTTTGAAAAGCATCAATGAACAAAACTGTGACTTGTACCATTTCCCAGTGAGCATCTTGGTTTTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR-3UTR CCA 90 bp | GTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACACAGGCCATCTTTCTATGCTCACTGGGAAATaGTACAAGTCACAGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VQTKLCFRISFINTGHLSMLTGK*YKSQFC Trigger: ACAAAACTGTGACTTGTACCATTTCCCAGTGAGCAT...AGAAAGATGGCCTGTGTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR GCA 72 bp | TGTTTTGGAGACAGGGTTTCTCTGTGTGCCCCTAGCTaGCCTGGAACTCTCTCTGTAGACCAGGCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: CFGDRVSLCAPS*PGTLSVDQAGL Trigger: GAGGCCAGCCTGGTCTACAGAGAGAGTTCCAGGGCAGCTAGGGGCACACAGAGAAACCCTGTCTCCAAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR TCA 72 bp | AGACTTGATGCAACCCCAGAAGTCACTGGAGAGCACTaGCAGTCTCGGTCACCACAGAAAAGCAAAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: RLDATPEVTGEH*QSRSPQKSKGL Trigger: CAAGCCTTTGCTTTTCTGTGGTGACCGAGACTGTCAGTGCTCTCCAGTGACTTCTGGGGTTGCATCAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR TCA 72 bp | GGCCTCAAACTCAGAGATATGCCCACCTCTGCCTCCTaGGTGCTAGAACTAAAGGCATGTGCCAATATTGCC | + |
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Preference number: 3 (lower is better) Translates to: GLKLRDMPTSAS*VLELKACANIA Trigger: GGCAATATTGGCACATGCCTTTAGTTCTAGCACTCAGGAGGCAGAGGTGGGCATATCTCTGAGTTTGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR TCA 72 bp | CGAAAGCCTCCAAATATATTCATTGATTTGGAACCATaGACCTGCATCATGACCTTGAGGCGATCCAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: RKPPNIFIDLEP*TCIMTLRRSKG Trigger: TCCTTTGGATCGCCTCAAGGTCATGATGCAGGTTCATGGTTCCAAATCAATGAATATATTTGGAGGCTTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| 3UTR GCA 72 bp | CTCCTGAGTGCTAGAACTAAAGGCATGTGCCAATATTaGCAGGCTAAGACTATCAAACATCTTCTTATAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLSARTKGMCQY*QAKTIKHLLIE Trigger: TTCTATAAGAAGATGTTTGATAGTCTTAGCCTGGCAATATTGGCACATGCCTTTAGTTCTAGCACTCAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CCA 72 bp | GTACAGATAAATCAGTCATACCTTACACATGTTCACTaGGAGACGATTCAATTTCATAATGAAGTATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: VQINQSYLTHVH*ETIQFHNEVWP Trigger: TGGCCATACTTCATTATGAAATTGAATCGTCTCCCAGTGAACATGTGTAAGGTATGACTGATTTATCTGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR TCA 72 bp | GTGCCTTCTATAATTCATTCCTATTCTGCTTACAGATaGGGAGATAAACTGTGCAAAGTAGACTTTGAATAT | + |
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Preference number: 3 (lower is better) Translates to: VPSIIHSYSAYR*GDKLCKVDFEY Trigger: ATATTCAAAGTCTACTTTGCACAGTTTATCTCCTCATCTGTAAGCAGAATAGGAATGAATTATAGAAGGCAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR TCA 72 bp | ATTATGCAGATTGAGCCTTTCATTAAAACAGGTAGATaGATATATACTACTATTGAAGTGTGCTGGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: IMQIEPFIKTGR*IYTTIEVCWCL Trigger: AAGGCACCAGCACACTTCAATAGTAGTATATATTCATCTACCTGTTTTAATGAAAGGCTCAATCTGCATAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | ATGACCTTGAGGCGATCCAAAGGAGCGGTGCTCGTTCTAGAGACGGCGCCCGCCTTCTCCTCCGCGTCCTaGCCCAGCGGGATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MTLRRSKGAVLVLETAPAFSSAS*PSGMPR Trigger: CCTGGGCATCCCGCTGGGCCAGGACGCGGAGGAGAA...GGCGGGCGCCGTCTCTAGAACGAGCACCGCTCCTTTGGATCGCCTCAAGGTCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS-3UTR GCA 90 bp | CATCATGACCTTGAGGCGATCCAAAGGAGCGGTGCTCGTTCTAGAGACGGCGCCCCTGGCCCAGCGGGATaGCCAGGCTTTGCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: HHDLEAIQRSGARSRDGAPGPAG*PGFAAP Trigger: AGGGGCTGCAAAGCCTGGGCATCCCGCTGGGCCAGG...GGCGCCGTCTCTAGAACGAGCACCGCTCCTTTGGATCGCCTCAAGGTCATGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS-3UTR GCA 90 bp | ATGACCTTGAGGCGATCCAAAGGAGCGGTGCTCGTTCTAGAGACGGCGCCCGCCCTTTGCAGCCCCTGCTaGAGCTCTCCGATGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: MTLRRSKGAVLVLETAPALCSPC*SSPMST Trigger: GGTGGACATCGGAGAGCTGCAGCAGGGGCTGCAAAG...GGCGGGCGCCGTCTCTAGAACGAGCACCGCTCCTTTGGATCGCCTCAAGGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS-3UTR GCA 90 bp | GCAGGGCAAGTAGAAAGAAGCATGCCCACTGAAATAAGCATTACCTCACGGCTCAGGCTTTGCAGCCCCTaGTGCAGCTCTCCGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: AGQVERSMPTEISITSRLRLCSP*CSSPMS Trigger: GGACATCGGAGAGCTGCAGCAGGGGCTGCAAAGCCT...GAGCCGTGAGGTAATGCTTATTTCAGTGGGCATGCTTCTTTCTACTTGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | CCACACAAAATGATTTCATCTCAAGCCAGTACATTTTCAGATTTAGGGTGCAGGCCACGCCGTCCCCATTaGGGTCCAGCGCCCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PHKMISSQASTFSDLGCRPRRPH*GPAPGR Trigger: TCTTCCGGGCGCTGGACCGCAATGGGGACGGCGTGG...CCTGCACCCTAAATCTGAAAATGTACTGGCTTGAGATGAAATCATTTTGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | TCAGATTTAGGGTGCAGGGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTCGTGGCAGGCGGCGGTaGGCAGCACAAAGGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SDLGCRAEISISKNTVQFRGRRR*AAQRPA Trigger: TGCGGGCCTTTGTGCTGCCCACCGCCGCCTGCCACG...AAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCCCTGCACCCTAAATCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | ATAGTTAAACTATCCCCTATGTCAATTCCAGTAGAGTGTTTCCAGAAACGGATACGTGGCAGGCGGCGGTaGGCAGCACAAAGGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: IVKLSPMSIPVECFQKRIRGRRR*AAQRPA Trigger: TGCGGGCCTTTGTGCTGCCCACCGCCGCCTGCCACG...TATCCGTTTCTGGAAACACTCTACTGGAATTGACATAGGGGATAGTTTAACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| 3UTR CAA 72 bp | CCTTTGGCGAGGCAAACAGCTTCCTTTGTGATAGACTaGATGCAACCCCAGAAGTCACTGGAGAGCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: PLARQTASFVID*MQPQKSLESTD Trigger: GTCAGTGCTCTCCAGTGACTTCTGGGGTTGCATCAAGTCTATCACAAAGGAAGCTGTTTGCCTCGCCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | ATAGTTAAACTATCCCCTATGTCAATTCCAGTAGAGTGTTTCCAGAAACGGATACCACGCCGTCCCCATTaGGGTCCAGCGCCCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: IVKLSPMSIPVECFQKRIPRRPH*GPAPGR Trigger: TCTTCCGGGCGCTGGACCGCAATGGGGACGGCGTGG...TATCCGTTTCTGGAAACACTCTACTGGAATTGACATAGGGGATAGTTTAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTTGTGGTTTCTTCACTTCCTGGCCCAGCGGGATaGCCAGGCTTTGCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GQRSLSAKIQYNFVVSSLPGPAG*PGFAAP Trigger: AGGGGCTGCAAAGCCTGGGCATCCCGCTGGGCCAGG...AAGTGAAGAAACCACAAAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTTGTGGTTTCTTCACTTTTCTCCTCCGCGTCCTaGCCCAGCGGGATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GQRSLSAKIQYNFVVSSLFSSAS*PSGMPR Trigger: CCTGGGCATCCCGCTGGGCCAGGACGCGGAGGAGAA...AAGTGAAGAAACCACAAAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | AACCCCAGAAGTCACTGGAGAGCACTGACAGTCTCGGTCACCACAGAAAAGCAAAGCATCTGGAGAGACTaGACAATTTCAGAAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: NPRSHWRALTVSVTTEKQSIWRD*TISEGS Trigger: CGAGCCTTCTGAAATTGTCCAGTCTCTCCAGATGCT...TTGCTTTTCTGTGGTGACCGAGACTGTCAGTGCTCTCCAGTGACTTCTGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | CCACACAAAATGATTTCATCTCAAGCCAGTACATTTTCAGATTTAGGGTGCAGGCTTTGCAGCCCCTGCTaGAGCTCTCCGATGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: PHKMISSQASTFSDLGCRLCSPC*SSPMST Trigger: GGTGGACATCGGAGAGCTGCAGCAGGGGCTGCAAAG...CCTGCACCCTAAATCTGAAAATGTACTGGCTTGAGATGAAATCATTTTGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | AAACTATCCCCTATGTCAATTCCAGTAGAGTGTTTCCAGAAACGGATAATTTCCGGGATGCCCAGGCTTTaGAGCCCCTGCTGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KLSPMSIPVECFQKRIISGMPRL*SPCCSS Trigger: AGAGCTGCAGCAGGGGCTGCAAAGCCTGGGCATCCC...GGAAATTATCCGTTTCTGGAAACACTCTACTGGAATTGACATAGGGGATAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| 3UTR CAA 72 bp | CAAAGGCTTGTAGTGATCACGGCTACACTCTTCCCTTaGGCGAGGCAAACAGCTTCCTTTGTGATAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: QRLVVITATLFP*ARQTASFVIDL Trigger: CAAGTCTATCACAAAGGAAGCTGTTTGCCTCGCCAAAGGGAAGAGTGTAGCCGTGATCACTACAAGCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 72 bp | GAAGTGTGCTGGTGCCTTAGCTTTGTGCCGCTCCATTaGAGAAGCACAGGTTCAAAGACCTCAACAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: EVCWCLSFVPLH*RSTGSKTSTVR Trigger: TCTTACTGTTGAGGTCTTTGAACCTGTGCTTCTCAAATGGAGCGGCACAAAGCTAAGGCACCAGCACACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | GTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACACAGGCCATCTTTCTGGGATGCCCAGGCTTTaGAGCCCCTGCTGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VQTKLCFRISFINTGHLSGMPRL*SPCCSS Trigger: AGAGCTGCAGCAGGGGCTGCAAAGCCTGGGCATCCC...AGAAAGATGGCCTGTGTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR TCA 90 bp | CTGTCCGCTGAATGTGCCTTCTATAATTCATTCCTATTCTGCTTACAGATGAGGGCCTCTGTAAAGTCCTaGCACTCCTTCTTTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: LSAECAFYNSFLFCLQMRASVKS*HSFFGD Trigger: GTCTCCAAAGAAGGAGTGTCAGGACTTTACAGAGGC...CCTCATCTGTAAGCAGAATAGGAATGAATTATAGAAGGCACATTCAGCGGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | GCAGGGCAAGTAGAAAGAAGCATGCCCACTGAAATAAGCATTACCTCACGGCTCGTTTCAAAATCTTCTTaGCACAACCGTATATTCCGG | + |
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Preference number: 4 (lower is better) Translates to: AGQVERSMPTEISITSRLVSKSS*HNRIFR Trigger: CCGGAATATACGGTTGTGCCAAGAAGATTTTGAAAC...GAGCCGTGAGGTAATGCTTATTTCAGTGGGCATGCTTCTTTCTACTTGCCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | TCAGATTTAGGGTGCAGGGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTTGGCTTGAGCCTGCATaGGAGTTCTCACCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SDLGCRAEISISKNTVQFWLEPA*EFSPKP Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCA...AAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCCCTGCACCCTAAATCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | GTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACACAGGCCATCTTTCTGAAAAAGGCCAACCATaGTCAGCTGCGGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VQTKLCFRISFINTGHLSEKGQP*SAAGLL Trigger: AAGGAGCCCCGCAGCTGAGCATGGTTGGCCTTTTTC...AGAAAGATGGCCTGTGTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | CTGTCCGCTGAATGTGCCTTCTATAATTCATTCCTATTCTGCTTACAGATGAGGAGTATTGTCCAGTTTTaGCTACAGCTAGCCGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSAECAFYNSFLFCLQMRSIVQF*LQLAGF Trigger: AAACCCGGCTAGCTGTAGCCAAAACTGGACAATACT...CCTCATCTGTAAGCAGAATAGGAATGAATTATAGAAGGCACATTCAGCGGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR TCA 90 bp | AGTAAGAGGGAAACAAGGGTTTATTTACCTGAACTTGACACTCAAGTAGGAGAATGCCTGCGTAAGGAATaGTGCCTAGTAAATTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SKRETRVYLPELDTQVGECLRKE*CLVNWE Trigger: TTCCCAATTTACTAGGCATCATTCCTTACGCAGGCA...TTCTCCTACTTGAGTGTCAAGTTCAGGTAAATAAACCCTTGTTTCCCTCTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | ATGCAGGCATCCGTAGTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACAAAAGTCTGAGCAGTTaGTCCAGCCATGGAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: MQASVVQTKLCFRISFINKSLSS*SSHGTR Trigger: TCTGGTTCCATGGCTGGAGCAACTGCTCAGACTTTT...GTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTACTACGGATGCCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CCA 90 bp | CCACACAAAATGATTTCATCTCAAGCCAGTACATTTTCAGATTTAGGGTGCAGGTGTAAACCGAGCATCTaGAGAGACTGGACAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: PHKMISSQASTFSDLGCRCKPSI*RDWTIS Trigger: TGAAATTGTCCAGTCTCTCCAGATGCTCGGTTTACA...CCTGCACCCTAAATCTGAAAATGTACTGGCTTGAGATGAAATCATTTTGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTTGTGGTTTCTTCACTTTCCCATCAGAGTCGATaGTTTGAAGAATCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GQRSLSAKIQYNFVVSSLSHQSR*FEESAL Trigger: CAGAGCTGATTCTTCAAAGCATCGACTCTGATGGGA...AAGTGAAGAAACCACAAAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 72 bp | CTTTCATTAAAACAGGTAGATGAATATATACTACTATaGAAGTGTGCTGGTGCCTTAGCTTTGTGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSLKQVDEYILL*KCAGALALCRS Trigger: GGAGCGGCACAAAGCTAAGGCACCAGCACACTTCAATAGTAGTATATATTCATCTACCTGTTTTAATGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR GCA 90 bp | GTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACACAGGCCATCTTTCTGCTACTCCCAGGGTCTaGTTCATATTTTCATACACC | + |
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Preference number: 4 (lower is better) Translates to: VQTKLCFRISFINTGHLSATPRV*FIFSYT Trigger: GGTGTATGAAAATATGAAGCAGACCCTGGGAGTAGC...AGAAAGATGGCCTGTGTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 72 bp | CAAGATGCTCACTGGGAAATGGTACAAGTCACAGTTTaGTTCATTGATGCTTTTCAAAGTGATGACCGAATA | + |
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Preference number: 4 (lower is better) Translates to: QDAHWEMVQVTV*FIDAFQSDDRI Trigger: TATTCGGTCATCACTTTGAAAAGCATCAATGAACAAAACTGTGACTTGTACCATTTCCCAGTGAGCATCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| 3UTR CAA 72 bp | GGCAGAGATCTCTATCAGCAAAAATACAGTACAATTTaGTGGTTTCTTCACTTACTGGAACTACGATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GRDLYQQKYSTI*WFLHLLELRFR Trigger: TCTGAATCGTAGTTCCAGTAAGTGAAGAAACCACAAAATTGTACTGTATTTTTGCTGATAGAGATCTCTGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | GGAGCGGTGCTCGTTCTAGAGACGGCGCCCGCCACACCTCCTGCCAGGAGCTGCTCCAGCTTCCCATCTTaGTTGACATCGCCAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GAVLVLETAPATPPARSCSSFPS*LTSPVV Trigger: CACCACTGGCGATGTCAACAAAGATGGGAAGCTGGA...GCAGCTCCTGGCAGGAGGTGTGGCGGGCGCCGTCTCTAGAACGAGCACCGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS GCA 90 bp | CTGACACTCCTTCTTTGGAGACGATTCGCTGAAAAAGGCCAACCATaGTCAGCTGCGGGGCTCCTTCTACCGTGGCTTGAGCCTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: LTLLLWRRFAEKGQP*SAAGLLLPWLEPAC Trigger: GCATGCAGGCTCAAGCCACGGTAGAAGGAGCCCCGCAGCTGAGCATGGTTGGCCTTTTTCAGCGAATCGTCTCCAAAGAAGGAGTGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS TCA 90 bp | TGCTGGATAGGGCTCCACAGCTCAGCAGCACCATCACGCCAGGGTTaGCCGAGTCTTTGGCAAAGTTATCCAGCCAATAAGACTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: CWIGLHSSAAPSRQG*PSLWQSYPANKTSK Trigger: TTTTGAAGTCTTATTGGCTGGATAACTTTGCCAAAGACTCGGTCAACCCTGGCGTGATGGTGCTGCTGAGCTGTGGAGCCCTATCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | ATGCAGGCATCCGTAGTACAAACCAAGCTGTGTTTTAGAATAAGTTTCATAAACACCACGCCGTCCCCATaGCGGTCCAGCGCCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MQASVVQTKLCFRISFINTTPSP*RSSARK Trigger: CTTCCGGGCGCTGGACCGCAATGGGGACGGCGTGGT...GTTTATGAAACTTATTCTAAAACACAGCTTGGTTTGTACTACGGATGCCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | ATAGTTAAACTATCCCCTATGTCAATTCCAGTAGAGTGTTTCCAGAAACGGATAACCACGCCGTCCCCATaGCGGTCCAGCGCCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IVKLSPMSIPVECFQKRITTPSP*RSSARK Trigger: CTTCCGGGCGCTGGACCGCAATGGGGACGGCGTGGT...TATCCGTTTCTGGAAACACTCTACTGGAATTGACATAGGGGATAGTTTAACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS-3UTR CAA 90 bp | AGTAAGAGGGAAACAAGGGTTTATTTACCTGAACTTGACACTCAAGTAGGAGAACGGGATGCCCAGGCTTaGCAGCCCCTGCTGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SKRETRVYLPELDTQVGERDAQA*QPLLQL Trigger: GAGCTGCAGCAGGGGCTGCAAAGCCTGGGCATCCCG...TTCTCCTACTTGAGTGTCAAGTTCAGGTAAATAAACCCTTGTTTCCCTCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | ATAGTTAAACTATCCCCTATGTCAATTCCAGTAGAGTGTTTCCAGAAACGGATACGGGATGCCCAGGCTTaGCAGCCCCTGCTGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: IVKLSPMSIPVECFQKRIRDAQA*QPLLQL Trigger: GAGCTGCAGCAGGGGCTGCAAAGCCTGGGCATCCCG...TATCCGTTTCTGGAAACACTCTACTGGAATTGACATAGGGGATAGTTTAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140786.3 |
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| CDS-3UTR CAA 90 bp | AACCCCAGAAGTCACTGGAGAGCACTGACAGTCTCGGTCACCACAGAAAAGCAAGCTATTTTGATGACATaGGTGCCATTTCCTCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: NPRSHWRALTVSVTTEKQAILMT*VPFPLQ Trigger: TTGGAGAGGAAATGGCACCAATGTCATCAAAATAGC...TTGCTTTTCTGTGGTGACCGAGACTGTCAGTGCTCTCCAGTGACTTCTGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | CTGTCCGCTGAATGTGCCTTCTATAATTCATTCCTATTCTGCTTACAGATGAGGTCCAGCTTCCCATCTTaGTTGACATCGCCAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LSAECAFYNSFLFCLQMRSSFPS*LTSPVV Trigger: CACCACTGGCGATGTCAACAAAGATGGGAAGCTGGA...CCTCATCTGTAAGCAGAATAGGAATGAATTATAGAAGGCACATTCAGCGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS TCA 90 bp | CATTCATTCCAGTCCACGGTCATCGTCCCATCAGAGTCGATGCTTTaGAGAATCAGCTCTGCTTGCTTTTCAGAAATATGTAAACCGAGC | + |
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Preference number: 5 (lower is better) Translates to: HSFQSTVIVPSESML*RISSACFSEICKPS Trigger: GCTCGGTTTACATATTTCTGAAAAGCAAGCAGAGCTGATTCTTCAAAGCATCGACTCTGATGGGACGATGACCGTGGACTGGAATGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | AGTAAGAGGGAAACAAGGGTTTATTTACCTGAACTTGACACTCAAGTAGGAGAATCCTTCTACCGTGGCTaGAGCCTGCATGCGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SKRETRVYLPELDTQVGESFYRG*SLHASS Trigger: AGAACTCGCATGCAGGCTCAAGCCACGGTAGAAGGA...TTCTCCTACTTGAGTGTCAAGTTCAGGTAAATAAACCCTTGTTTCCCTCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | CCACACAAAATGATTTCATCTCAAGCCAGTACATTTTCAGATTTAGGGTGCAGGGGGTTGACCGAGTCTTaGGCAAAGTTATCCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: PHKMISSQASTFSDLGCRGLTES*AKLSSQ Trigger: TTGGCTGGATAACTTTGCCAAAGACTCGGTCAACCC...CCTGCACCCTAAATCTGAAAATGTACTGGCTTGAGATGAAATCATTTTGTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CCA 90 bp | TCTGCTTGCTTTTCAGAAATATGTAAACCGAGCATCTGGAGAGACTaGACAATTTCAGAAGGCTCGATTTTCCCGTCATTATTCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SACFSEICKPSIWRD*TISEGSIFPSLFLS Trigger: GGACAAGAATAATGACGGGAAAATCGAGCCTTCTGAAATTGTCCAGTCTCTCCAGATGCTCGGTTTACATATTTCTGAAAAGCAAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CCA 90 bp | AGAATCAGCTCTGCTTGCTTTTCAGAAATATGTAAACCGAGCATCTaGAGAGACTGGACAATTTCAGAAGGCTCGATTTTCCCGTCATTA | + |
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Preference number: 5 (lower is better) Translates to: RISSACFSEICKPSI*RDWTISEGSIFPSL Trigger: TAATGACGGGAAAATCGAGCCTTCTGAAATTGTCCAGTCTCTCCAGATGCTCGGTTTACATATTTCTGAAAAGCAAGCAGAGCTGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | TTCAAAGACCTCAACAGTAAGAGGGAAACAAGGGTTTATTTACCTGAACTTGACAGCTTCCCATCTTTGTaGACATCGCCAGTGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: FKDLNSKRETRVYLPELDSFPSL*TSPVVK Trigger: TTTCACCACTGGCGATGTCAACAAAGATGGGAAGCT...GTCAAGTTCAGGTAAATAAACCCTTGTTTCCCTCTTACTGTTGAGGTCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS-3UTR CAA 90 bp | CCACACAAAATGATTTCATCTCAAGCCAGTACATTTTCAGATTTAGGGTGCAGGTGTTTCAAAATCTTCTaGGCACAACCGTATATTCCG | + |
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Preference number: 5 (lower is better) Translates to: PHKMISSQASTFSDLGCRCFKIF*AQPYIP Trigger: CGGAATATACGGTTGTGCCAAGAAGATTTTGAAACA...CCTGCACCCTAAATCTGAAAATGTACTGGCTTGAGATGAAATCATTTTGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CCA 72 bp | TGCGGTCCAGCGCCCGGAAGAGCGTTTCGTAGCGTGTaGGCGGCTCCGCGTCGTGGCAGGCGGCGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CGPAPGRAFRSV*AAPRRGRRRWA Trigger: TGCCCACCGCCGCCTGCCACGACGCGGAGCCGCCCACACGCTACGAAACGCTCTTCCGGGCGCTGGACCGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029477.11 ENSMUST00000140786.3 |
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| CDS TCA 72 bp | ACCATGCTCAGCTGCGGGGCTCCTTCTACCGTGGCTTaGGCCTGCATGCGAGTTCTCACCAAAGCCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TMLSCGAPSTVA*ACMRVLTKARG Trigger: CCCCCTGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCACGGTAGAAGGAGCCCCGCAGCTGAGCATGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CCA 72 bp | GGCCAACCATGCTCAGCTGCGGGGCTCCTTCTACCGTaGCTTGAGCCTGCATGCGAGTTCTCACCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GQPCSAAGLLLP*LEPACEFSPKP Trigger: TGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCACGGTAGAAGGAGCCCCGCAGCTGAGCATGGTTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CAA 72 bp | AACCATGCTCAGCTGCGGGGCTCCTTCTACCGTGGCTaGAGCCTGCATGCGAGTTCTCACCAAAGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: NHAQLRGSFYRG*SLHASSHQSQG Trigger: CCCCTGGCTTTGGTGAGAACTCGCATGCAGGCTCAAGCCACGGTAGAAGGAGCCCCGCAGCTGAGCATGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS TCA 72 bp | GGGCTCCACAGCTCAGCAGCACCATCACGCCAGGGTTaGCCGAGTCTTTGGCAAAGTTATCCAGCCAATAAG | + |
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Preference number: 6 (lower is better) Translates to: GLHSSAAPSRQG*PSLWQSYPANK Trigger: CTTATTGGCTGGATAACTTTGCCAAAGACTCGGTCAACCCTGGCGTGATGGTGCTGCTGAGCTGTGGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS GCA 72 bp | CTTCTTTGGAGACGATTCGCTGAAAAAGGCCAACCATaGTCAGCTGCGGGGCTCCTTCTACCGTGGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLWRRFAEKGQP*SAAGLLLPWLE Trigger: CTCAAGCCACGGTAGAAGGAGCCCCGCAGCTGAGCATGGTTGGCCTTTTTCAGCGAATCGTCTCCAAAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CAA 72 bp | CCAGTCCACGGTCATCGTCCCATCAGAGTCGATGCTTaGAAGAATCAGCTCTGCTTGCTTTTCAGAAATATG | + |
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Preference number: 6 (lower is better) Translates to: PVHGHRPIRVDA*KNQLCLLFRNM Trigger: CATATTTCTGAAAAGCAAGCAGAGCTGATTCTTCAAAGCATCGACTCTGATGGGACGATGACCGTGGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CAA 72 bp | AACTTCACAGCTGTCTCGGGAGCTATTTTGATGACATaGGTGCCATTTCCTCTCCAAAGGGAACGGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: NFTAVSGAILMT*VPFPLQRERIP Trigger: AGGAATCCGTTCCCTTTGGAGAGGAAATGGCACCAATGTCATCAAAATAGCTCCCGAGACAGCTGTGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS TCA 72 bp | CAGTCCACGGTCATCGTCCCATCAGAGTCGATGCTTTaGAGAATCAGCTCTGCTTGCTTTTCAGAAATATGT | + |
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Preference number: 6 (lower is better) Translates to: QSTVIVPSESML*RISSACFSEIC Trigger: ACATATTTCTGAAAAGCAAGCAGAGCTGATTCTTCAAAGCATCGACTCTGATGGGACGATGACCGTGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS GCA 72 bp | CTCCAAAGGGAACGGATTCCTCCTTCCTTTACCATCTaGCGAAAGCCTCCAAATATATTCATTGATTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LQRERIPPSFTI*RKPPNIFIDLE Trigger: TTCCAAATCAATGAATATATTTGGAGGCTTTCGGCAGATGGTAAAGGAAGGAGGAATCCGTTCCCTTTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CCA 72 bp | TCTGCTTGCTTTTCAGAAATATGTAAACCGAGCATCTaGAGAGACTGGACAATTTCAGAAGGCTCGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: SACFSEICKPSI*RDWTISEGSIF Trigger: GAAAATCGAGCCTTCTGAAATTGTCCAGTCTCTCCAGATGCTCGGTTTACATATTTCTGAAAAGCAAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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| CDS CCA 72 bp | TTTTCAGAAATATGTAAACCGAGCATCTGGAGAGACTaGACAATTTCAGAAGGCTCGATTTTCCCGTCATTA | + |
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Preference number: 6 (lower is better) Translates to: FSEICKPSIWRD*TISEGSIFPSL Trigger: TAATGACGGGAAAATCGAGCCTTCTGAAATTGTCCAGTCTCTCCAGATGCTCGGTTTACATATTTCTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029477.11 |
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