Pregenerated sensors for SLC25A23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046329Ensembl transcript IDs: ENSMUST00000040280.14, ENSMUST00000163442.8, ENSMUST00000170015.8, ENSMUST00000171128.2, ENSMUST00000171528.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGGGCACTGGGTCTGGTGCCTGAGGGCTCTGAGAGCTGGGCTATaGGGTACATGGATGAGTGTTCCCATGCTTGGGGCATTGGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LGHWVWCLRALRAGL*GTWMSVPMLGALGS Trigger: TGACCCCAATGCCCCAAGCATGGGAACACTCATCCATGTACCCCATAGCCCAGCTCTCAGAGCCCTCAGGCACCAGACCCAGTGCCCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | CAGGACCCTGTGGCTGAGAGTTCTTGGCTCCTAGAATCCAGGGGCTaGGCTGTGAGGCAGGTTACAGGGAACTCAGCAGCAAGTTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: QDPVAESSWLLESRG*AVRQVTGNSAASLG Trigger: CCCTAAACTTGCTGCTGAGTTCCCTGTAACCTGCCTCACAGCCCAGCCCCTGGATTCTAGGAGCCAAGAACTCTCAGCCACAGGGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | AGGATCTTGGCTTTGCTGTGTCAGGACCCTGTGGCTGAGAGTTCTTaGCTCCTAGAATCCAGGGGCTGGGCTGTGAGGCAGGTTACAGGG | + |
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Preference number: 1 (lower is better) Translates to: RILALLCQDPVAESS*LLESRGWAVRQVTG Trigger: CCCTGTAACCTGCCTCACAGCCCAGCCCCTGGATTCTAGGAGCCAAGAACTCTCAGCCACAGGGTCCTGACACAGCAAAGCCAAGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR GCA 90 bp | TTTAGGGATCTCTGGTCCAGTGTGGCATTAGGGCACTGGGTCTGGTaGCTGAGGGCTCTGAGAGCTGGGCTATGGGGTACATGGATGAGT | + |
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Preference number: 1 (lower is better) Translates to: FRDLWSSVALGHWVW*LRALRAGLWGTWMS Trigger: ACTCATCCATGTACCCCATAGCCCAGCTCTCAGAGCCCTCAGGCACCAGACCCAGTGCCCTAATGCCACACTGGACCAGAGATCCCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | TGTGAGGCAGGTTACAGGGAACTCAGCAGCAAGTTTAGGGATCTCTaGTCCAGTGTGGCATTAGGGCACTGGGTCTGGTGCCTGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: CEAGYRELSSKFRDL*SSVALGHWVWCLRA Trigger: AGCCCTCAGGCACCAGACCCAGTGCCCTAATGCCACACTGGACCAGAGATCCCTAAACTTGCTGCTGAGTTCCCTGTAACCTGCCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | TGGAGCTCTCGCACCCATGCTTCCAGGAGACAGAATCCAGTGGATTaGGACTTGGGGTCCAGTGGTGAGAGATTGAGGGTGGTGCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: WSSRTHASRRQNPVD*DLGSSGERLRVVLG Trigger: TCCAAGCACCACCCTCAATCTCTCACCACTGGACCCCAAGTCCCAATCCACTGGATTCTGTCTCCTGGAAGCATGGGTGCGAGAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | CTGGAATTTAGCAGCTGGGGCATGTGGGATCCACATGAGGGACCCTaGAGCTCTCGCACCCATGCTTCCAGGAGACAGAATCCAGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: LEFSSWGMWDPHEGP*SSRTHASRRQNPVD Trigger: ATCCACTGGATTCTGTCTCCTGGAAGCATGGGTGCGAGAGCTCCAGGGTCCCTCATGTGGATCCCACATGCCCCAGCTGCTAAATTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | TGTGTGTTGGTCCTTGATTGCAACTTTCTGAGGCCTGAGCAGGACTaGCAGTGTGAGAGGCAGGTGGTCCCCTTGGTGGTGTCCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: CVLVLDCNFLRPEQD*QCERQVVPLVVSLT Trigger: AGTCAGGGACACCACCAAGGGGACCACCTGCCTCTCACACTGCCAGTCCTGCTCAGGCCTCAGAAAGTTGCAATCAAGGACCAACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR GCA 90 bp | GAGGGACAAGACACCCCCTTCTTGAATCATGTTTCTCAGGCCCCCTaGATGAATACCTTGAGTCGGTCCAGAGGAGCTGTGCCTGTCCGT | + |
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Preference number: 1 (lower is better) Translates to: EGQDTPFLNHVSQAP*MNTLSRSRGAVPVR Trigger: ACGGACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGGGGCCTGAGAAACATGATTCAAGAAGGGGGTGTCTTGTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR TCA 90 bp | GGTTTCATGAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCTaGGGCCTGAGCAGGACTGGCAGTGTGAGAGGCAGGTGGTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: GFMKDVVCWSLIATF*GLSRTGSVRGRWSP Trigger: AGGGGACCACCTGCCTCTCACACTGCCAGTCCTGCTCAGGCCTCAGAAAGTTGCAATCAAGGACCAACACACAACATCCTTCATGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR TCA 90 bp | GGTGTGGGGTTAGGATCCACTGGTCAGGCCATCAGTCTCTGTGGTTaGAGATATCAGCGTAGGGGATACCATGATGAAGATGAGGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: GVGLGSTGQAISLCG*RYQRRGYHDEDEGV Trigger: AACTCCCTCATCTTCATCATGGTATCCCCTACGCTGATATCTTCAACCACAGAGACTGATGGCCTGACCAGTGGATCCTAACCCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | TTCTATGAATGTGGTCCAGAGAAGGGGTTGAAGGAATCTGGGATCTaGAATTTAGCAGCTGGGGCATGTGGGATCCACATGAGGGACCCT | + |
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Preference number: 1 (lower is better) Translates to: FYECGPEKGLKESGI*NLAAGACGIHMRDP Trigger: AGGGTCCCTCATGTGGATCCCACATGCCCCAGCTGCTAAATTCCAGATCCCAGATTCCTTCAACCCCTTCTCTGGACCACATTCATAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | TCACGTTCTAAGATCCGCTTTGCACAATCCAGGAGCCCCTTGTATTaGCCAGTTCTGCGTAGAGTCAGCCGAGTCTTTAGTACCTCCATG | + |
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Preference number: 1 (lower is better) Translates to: SRSKIRFAQSRSPLY*PVLRRVSRVFSTSM Trigger: CATGGAGGTACTAAAGACTCGGCTGACTCTACGCAGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGAACGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR CCA 90 bp | AGGGTATGGATAGTTTTACATATCAAGTGTCAGGCTGCTGATATGTaGGGTCCAGTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: RVWIVLHIKCQAADM*GPVVGASRSGCEVG Trigger: CCCAACTTCACAACCAGACCTCGAAGCCCCAACCACTGGACCCCACATATCAGCAGCCTGACACTTGATATGTAAAACTATCCATACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | ACCCCAGGTCTAAGCTCAGAATCCAATCTTGAAGTGTGGAGGGTATaGGAATGTGGTGGGAGCCAGGGGACTTTGTTCTCTGGTAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: TPGLSSESNLEVWRV*ECGGSQGTLFSGRK Trigger: TTTTCTACCAGAGAACAAAGTCCCCTGGCTCCCACCACATTCCCATACCCTCCACACTTCAAGATTGGATTCTGAGCTTAGACCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 90 bp | CAGGGGACTTTGTTCTCTGGTAGAAAAATAGACTCCGAGTCAGCTTaGGGATACTTAATTTGCATACTGGATGCTGGGTTTCATGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: QGTLFSGRKIDSESA*GYLICILDAGFHEG Trigger: TCCTTCATGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCTATTTTTCTACCAGAGAACAAAGTCCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR GCA 90 bp | TCTGGTAGAAAAATAGACTCCGAGTCAGCTTGGGGATACTTAATTTaGATACTGGATGCTGGGTTTCATGAAGGATGTTGTGTGTTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SGRKIDSESAWGYLI*ILDAGFHEGCCVLV Trigger: GACCAACACACAACATCCTTCATGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCTATTTTTCTACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGGGATCCACATGAGGGACCCTGGAGCTCTCGCACCCATGCTTCCAGGAAGCAGGGTCCAGCTTTaGGGTGTAGATGACAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: ACGIHMRDPGALAPMLPGSRVQL*GVDDRV Trigger: GACCCTGTCATCTACACCCCAAAGCTGGACCCTGCT...TCCTGGAAGCATGGGTGCGAGAGCTCCAGGGTCCCTCATGTGGATCCCACATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGTCCAGTGTGGCATTAGGGCACTGGGTCTGGTGCCTGAGGGCTCTGAGAGGTCTAGCAACCAGTaGGGCAGGGAAAAGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SLVQCGIRALGLVPEGSERSSNQ*GREKQG Trigger: ACCCTGCTTTTCCCTGCCCCACTGGTTGCTAGACCT...CTCAGAGCCCTCAGGCACCAGACCCAGTGCCCTAATGCCACACTGGACCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGCTGTGCCTGTCCGTGACACAGCGCCAGCCACTGCACCAGCCACCAGCTGTAAGTTTCTCTTCCTaGGAGAACTCATCAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: EELCLSVTQRQPLHQPPAVSFSS*ENSSGT Trigger: GGTGCCTGATGAGTTCTCCCAGGAAGAGAAACTTAC...AGCTGGTGGCTGGTGCAGTGGCTGGCGCTGTGTCACGGACAGGCACAGCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGTCCAGTGTGGCATTAGGGCACTGGGTCTGGTGCCTGAGGGCTCTGAGTTGGGGATCAAGTCCTaGGATCCTGTGGCTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SLVQCGIRALGLVPEGSELGIKS*DPVAQV Trigger: CACTTGAGCCACAGGATCCCAGGACTTGATCCCCAA...CTCAGAGCCCTCAGGCACCAGACCCAGTGCCCTAATGCCACACTGGACCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | GAATTTAGCAGCTGGGGCATGTGGGATCCACATGAGGGACCCTGGAGCTCTCGCCTAGAATCCAGGGGCTaGGCTGTGAGGCAGGTTACA | + |
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Preference number: 2 (lower is better) Translates to: EFSSWGMWDPHEGPWSSRLESRG*AVRQVT Trigger: TGTAACCTGCCTCACAGCCCAGCCCCTGGATTCTAG...GCGAGAGCTCCAGGGTCCCTCATGTGGATCCCACATGCCCCAGCTGCTAAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CAA 90 bp | ACCCCCTTCTTGAATCATGTTTCTCAGGCCCCCTGCATGAATACCTaGAGTCGGTCCAGAGGAGCTGTGCCTGTCCGTGACACAGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: TPFLNHVSQAPCMNT*SRSRGAVPVRDTAP Trigger: TGGCGCTGTGTCACGGACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGGGGCCTGAGAAACATGATTCAAGAAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR CAA 90 bp | CAGGGAACCAGCCACGAAGCGCTCCTGAACGTGCAGTGTCTCCTGTaGCCCCCGGATGGCCCGCTTGATCTGTTCATAAGCCATGAATTT | + |
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Preference number: 2 (lower is better) Translates to: QGTSHEALLNVQCLL*PPDGPLDLFISHEF Trigger: AAATTCATGGCTTATGAACAGATCAAGCGGGCCATCCGGGGGCAACAGGAGACACTGCACGTTCAGGAGCGCTTCGTGGCTGGTTCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGATCCGCTTTGCACAATCCAGGAGCCCCTTGTATTGGCCAGTTCTGCGTGGTCCAGAGGAGCTGTaGCTGTCCGTGACACAGCGC | + |
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Preference number: 2 (lower is better) Translates to: SKIRFAQSRSPLYWPVLRGPEEL*LSVTQR Trigger: GCGCTGTGTCACGGACAGGCACAGCTCCTCTGGACC...ACGCAGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATATGTCCCATTCCTTACTGCCTGGTAGGGAGCCACTGGTCTGGCGTCTTGCAGGGTCAAGGTGCTTaGGAAGAAGGGTTTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FICPIPYCLVGSHWSGVLQGQGA*EEGFGA Trigger: GGCCCCAAACCCTTCTTCCCAAGCACCTTGACCCTG...CAAGACGCCAGACCAGTGGCTCCCTACCAGGCAGTAAGGAATGGGACATATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTAGGGAGGATCCAGGGACCCAGTaGCAGAGCCCAGGATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AEVQCSIHMSHSLLPGREDPGTQ*QSPGSW Trigger: CCAAGATCCTGGGCTCTGCCACTGGGTCCCTGGATC...CTCCCTACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CAA 90 bp | GGTAGGGAGCCACTGGTCTGGCGTCTTGAGCTTCTAGAAGACTCTTaGGATGGCATGCTTCCATGCATTGGGAATCAGCTCCAGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GREPLVWRLELLEDS*DGMLPCIGNQLQGV Trigger: CACACCCTGGAGCTGATTCCCAATGCATGGAAGCATGCCATCCAAAGAGTCTTCTAGAAGCTCAAGACGCCAGACCAGTGGCTCCCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATCCAATCTTGAAGTGTGGAGGGTATGGGAATGTGGTGGGAGCCAGGGGGGGGTTAGGATCCACTaGTCAGGCCATCAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SESNLEVWRVWECGGSQGGVRIH*SGHQSL Trigger: CAGAGACTGATGGCCTGACCAGTGGATCCTAACCCC...CCCCTGGCTCCCACCACATTCCCATACCCTCCACACTTCAAGATTGGATTCTGA 54% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAAGATCCGCTTTGCACAATCCAGGAGCCCCTTGTATTGGCCAGTTCTGCCCTCCATGGGGTATATaGTGGTTTGAGCTGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VLRSALHNPGAPCIGQFCPPWGI*WFELWP Trigger: GGGCCACAGCTCAAACCATCATATACCCCATGGAGG...GCAGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTAGGTTAGGGCACTGGGTCTaGTGCCTGAGGGCTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LAEVQCSIHMSHSLLPGRLGHWV*CLRALR Trigger: TCTCAGAGCCCTCAGGCACCAGACCCAGTGCCCTAA...CCTACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR GCA 90 bp | GTCCTAGCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTGAGCTCTCGCACCCATaGTTCCAGGAGACAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: VLAEVQCSIHMSHSLLPGELSHP*FQETES Trigger: GGATTCTGTCTCCTGGAAGCATGGGTGCGAGAGCTC...ACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGCTAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTACAGGGAACTCAGCAGCAAGTTTAGGGATCTCTGGTCCAGTGTGGCATAAGTGTGGGGTGCAGTaGTACCATGGTCAGGACACA | + |
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Preference number: 2 (lower is better) Translates to: QVTGNSAASLGISGPVWHKCGVQ*YHGQDT Trigger: TGTGTCCTGACCATGGTACCACTGCACCCCACACTT...ATGCCACACTGGACCAGAGATCCCTAAACTTGCTGCTGAGTTCCCTGTAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR TCA 90 bp | GAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCTGAGGCCTGAGCAGGACGTAGCTCCCAACCCATaGACAAGCAGATTCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: EGCCVLVLDCNFLRPEQDVAPNP*TSRFSP Trigger: AGGGCTGAATCTGCTTGTTCATGGGTTGGGAGCTAC...GTCCTGCTCAGGCCTCAGAAAGTTGCAATCAAGGACCAACACACAACATCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | TGGATGCTGGGTTTCATGAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCGTGGCATTAGGGCACTaGGTCTGGTGCCTGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WMLGFMKDVVCWSLIATFVALGH*VWCLRA Trigger: AGCCCTCAGGCACCAGACCCAGTGCCCTAATGCCAC...GAAAGTTGCAATCAAGGACCAACACACAACATCCTTCATGAAACCCAGCATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGGGATCCACATGAGGGACCCTGGAGCTCTCGCACCCATGCTTCCAGGAAAAAATGGGGGAATATaGAACCTCAAACAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ACGIHMRDPGALAPMLPGKNGGI*NLKQRK Trigger: TTTCCTCTGTTTGAGGTTCCATATTCCCCCATTTTT...TCCTGGAAGCATGGGTGCGAGAGCTCCAGGGTCCCTCATGTGGATCCCACATGC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCTAGCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTCAGAATCCAGTGGATTaGGACTTGGGGTCCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VLAEVQCSIHMSHSLLPGQNPVD*DLGSSG Trigger: ACCACTGGACCCCAAGTCCCAATCCACTGGATTCTG...ACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGCTAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CAA 90 bp | GTGTTTGGAAGTTTGGCCTTCTATGAATGTGGTCCAGAGAAGGGGTaGAAGGAATCTGGGATCTGGAATTTAGCAGCTGGGGCATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VFGSLAFYECGPEKG*KESGIWNLAAGACG Trigger: CCCACATGCCCCAGCTGCTAAATTCCAGATCCCAGATTCCTTCAACCCCTTCTCTGGACCACATTCATAGAAGGCCAAACTTCCAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR GCA 90 bp | GATGCTGGGTTTCATGAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCTGGGGGTCACCTGCTGCTaGATAGTGAGGTCTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: DAGFHEGCCVLVLDCNFLGVTCC*IVRSSN Trigger: GTTGCTAGACCTCACTATGCAGCAGCAGGTGACCCC...CAGAAAGTTGCAATCAAGGACCAACACACAACATCCTTCATGAAACCCAGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR CCA 90 bp | AGACTCCGAGTCAGCTTGGGGATACTTAATTTGCATACTGGATGCTGGGTTTCAGCTCCAGGGTGTGTCTaGGATATGAGATGCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RLRVSLGILNLHTGCWVSAPGCV*DMRCCH Trigger: GTGACAGCATCTCATATCCCAGACACACCCTGGAGC...TGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR GCA 90 bp | CATGCTTCCATGCATTGGGAATCAGCTCCAGGGTGTGTCTGGGATATGAGATGCTCAAACAGAGGAAAATaGATTGGTTGGGTTAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HASMHWESAPGCVWDMRCSNRGK*IGWVKG Trigger: TCCCTTAACCCAACCAATGCATTTTCCTCTGTTTGA...GCATCTCATATCCCAGACACACCCTGGAGCTGATTCCCAATGCATGGAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR-3UTR TCA 90 bp | AGACTCCGAGTCAGCTTGGGGATACTTAATTTGCATACTGGATGCTGGGTTTCAAAAGACCTTGGAGTATaGAGGTGTTTGGAAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: RLRVSLGILNLHTGCWVSKDLGV*RCLEVW Trigger: CCAAACTTCCAAACACCTTCATACTCCAAGGTCTTT...TGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR TCA 72 bp | GTGGCCCCGGCCAGGGAACCAGCCACGAAGCGCTCCTaGACGTGCAGTGTCTCCTGTTGCCCCCGGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: VAPAREPATKRS*TCSVSCCPRMA Trigger: GGCCATCCGGGGGCAACAGGAGACACTGCACGTTCAGGAGCGCTTCGTGGCTGGTTCCCTGGCCGGGGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGGAACCAGCCACGAAGCGCTCCTGAACGTGCAGTGTCTCCTGTTGCCCCCGCCCTGCATGAATACCTaGAGTCGGTCCAGAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: QGTSHEALLNVQCLLLPPPCMNT*SRSRGA Trigger: AGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGG...CGGGGGCAACAGGAGACACTGCACGTTCAGGAGCGCTTCGTGGCTGGTTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| 3UTR GCA 72 bp | CTCTGGTCCAGTGTGGCATTAGGGCACTGGGTCTGGTaGCTGAGGGCTCTGAGAGCTGGGCTATGGGGTACA | + |
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Preference number: 3 (lower is better) Translates to: LWSSVALGHWVW*LRALRAGLWGT Trigger: TGTACCCCATAGCCCAGCTCTCAGAGCCCTCAGGCACCAGACCCAGTGCCCTAATGCCACACTGGACCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 72 bp | AGGGCACTGGGTCTGGTGCCTGAGGGCTCTGAGAGCTaGGCTATGGGGTACATGGATGAGTGTTCCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: RALGLVPEGSES*AMGYMDECSHA Trigger: AGCATGGGAACACTCATCCATGTACCCCATAGCCCAGCTCTCAGAGCCCTCAGGCACCAGACCCAGTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| 3UTR CCA 72 bp | GCTTTGCTGTGTCAGGACCCTGTGGCTGAGAGTTCTTaGCTCCTAGAATCCAGGGGCTGGGCTGTGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALLCQDPVAESS*LLESRGWAVRQ Trigger: CTGCCTCACAGCCCAGCCCCTGGATTCTAGGAGCCAAGAACTCTCAGCCACAGGGTCCTGACACAGCAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | AGGGATCCAGGGACCCAGTGGCAGAGCCCAGGATCTTaGCTTTGCTGTGTCAGGACCCTGTGGCTGAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RDPGTQWQSPGS*LCCVRTLWLRV Trigger: AACTCTCAGCCACAGGGTCCTGACACAGCAAAGCCAAGATCCTGGGCTCTGCCACTGGGTCCCTGGATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | AGCAGCTGGGGCATGTGGGATCCACATGAGGGACCCTaGAGCTCTCGCACCCATGCTTCCAGGAGACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSWGMWDPHEGP*SSRTHASRRQN Trigger: ATTCTGTCTCCTGGAAGCATGGGTGCGAGAGCTCCAGGGTCCCTCATGTGGATCCCACATGCCCCAGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR TCA 72 bp | CAGGATCTTGGCTTTGCTGTGTCAGGACCCTGTGGCTaGGAGTTCTTGGCTCCTAGAATCCAGGGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QDLGFAVSGPCG*EFLAPRIQGLG Trigger: GCCCAGCCCCTGGATTCTAGGAGCCAAGAACTCTCAGCCACAGGGTCCTGACACAGCAAAGCCAAGATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | GATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATaGTCAGGACACAGGGCTAGGATCGGGGATTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DPVAQVWGAVVP*SGHRARIGDLG Trigger: ACCCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| 3UTR CCA 72 bp | TTGGGGATCAAGTCCTGGGATCCTGTGGCTCAAGTGTaGGGTGCAGTGGTACCATGGTCAGGACACAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGIKSWDPVAQV*GAVVPWSGHRA Trigger: AGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| 3UTR CCA 72 bp | GTGGCTGAGAGTTCTTGGCTCCTAGAATCCAGGGGCTaGGCTGTGAGGCAGGTTACAGGGAACTCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VAESSWLLESRG*AVRQVTGNSAA Trigger: TGCTGCTGAGTTCCCTGTAACCTGCCTCACAGCCCAGCCCCTGGATTCTAGGAGCCAAGAACTCTCAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CAAGCAGATTCAGCCCTCCCAGAGGGACCTGGGATCTaGGAGTTACTAGCCTGGAAGGAAGGCAGGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: QADSALPEGPGI*ELLAWKEGRGM Trigger: CATTCCCCTGCCTTCCTTCCAGGCTAGTAACTCCCAGATCCCAGGTCCCTCTGGGAGGGCTGAATCTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | GTCCTTGATTGCAACTTTCTGAGGCCTGAGCAGGACTaGCAGTGTGAGAGGCAGGTGGTCCCCTTGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLDCNFLRPEQD*QCERQVVPLVV Trigger: CACCACCAAGGGGACCACCTGCCTCTCACACTGCCAGTCCTGCTCAGGCCTCAGAAAGTTGCAATCAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | TGGGCTATGGGGTACATGGATGAGTGTTCCCATGCTTaGGGCATTGGGGTCACCTGCTGCTGCATAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WAMGYMDECSHA*GIGVTCCCIVR Trigger: CCTCACTATGCAGCAGCAGGTGACCCCAATGCCCCAAGCATGGGAACACTCATCCATGTACCCCATAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CGCACCCATGCTTCCAGGAGACAGAATCCAGTGGATTaGGACTTGGGGTCCAGTGGTGAGAGATTGAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RTHASRRQNPVD*DLGSSGERLRV Trigger: CACCCTCAATCTCTCACCACTGGACCCCAAGTCCCAATCCACTGGATTCTGTCTCCTGGAAGCATGGGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CTCCCAGAGGGACCTGGGATCTGGGAGTTACTAGCCTaGAAGGAAGGCAGGGGAATGTGGAAGACATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPEGPGIWELLA*KEGRGMWKTLQ Trigger: CTGCAATGTCTTCCACATTCCCCTGCCTTCCTTCCAGGCTAGTAACTCCCAGATCCCAGGTCCCTCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CTTCGAGGTCTGGTTGTGAAGTTGGGGATCAAGTCCTaGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LRGLVVKLGIKS*DPVAQVWGAVV Trigger: TACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| 3UTR CCA 72 bp | GGTTACAGGGAACTCAGCAGCAAGTTTAGGGATCTCTaGTCCAGTGTGGCATTAGGGCACTGGGTCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GYRELSSKFRDL*SSVALGHWVWC Trigger: GCACCAGACCCAGTGCCCTAATGCCACACTGGACCAGAGATCCCTAAACTTGCTGCTGAGTTCCCTGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR GCA 72 bp | AGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTaGCTGGTAGGGAGCCACTGGTCTGGCGTCTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RCNAAFICPIPY*LVGSHWSGVLS Trigger: GCTCAAGACGCCAGACCAGTGGCTCCCTACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR GCA 72 bp | GACACCCCCTTCTTGAATCATGTTTCTCAGGCCCCCTaGATGAATACCTTGAGTCGGTCCAGAGGAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DTPFLNHVSQAP*MNTLSRSRGAV Trigger: CACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGGGGCCTGAGAAACATGATTCAAGAAGGGGGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| 3UTR CCA 72 bp | ATATCAAGTGTCAGGCTGCTGATATGTGGGGTCCAGTaGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISSVRLLICGVQ*LGLRGLVVKLG Trigger: CCCCAACTTCACAACCAGACCTCGAAGCCCCAACCACTGGACCCCACATATCAGCAGCCTGACACTTGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR GCA 72 bp | TTGCACAATCCAGGAGCCCCTTGTATTGGCCAGTTCTaGGTAGAGTCAGCCGAGTCTTTAGTACCTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LHNPGAPCIGQF*VESAESLVPPW Trigger: CCATGGAGGTACTAAAGACTCGGCTGACTCTACGCAGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| 3UTR CCA 72 bp | TGTGGTCCAGAGAAGGGGTTGAAGGAATCTGGGATCTaGAATTTAGCAGCTGGGGCATGTGGGATCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: CGPEKGLKESGI*NLAAGACGIHM Trigger: CATGTGGATCCCACATGCCCCAGCTGCTAAATTCCAGATCCCAGATTCCTTCAACCCCTTCTCTGGACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTAGGTCCAGTGGTGAGAGATaGAGGGTGGTGCTTGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: LAEVQCSIHMSHSLLPGRSSGER*RVVLGM Trigger: CATTCCAAGCACCACCCTCAATCTCTCACCACTGGA...CCTACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR TCA 72 bp | CAGTGGATTGGGACTTGGGGTCCAGTGGTGAGAGATTaGGGGTGGTGCTTGGAATGTAGACCTAGCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QWIGTWGPVVRD*GWCLECRPSSK Trigger: TTTACTGCTAGGTCTACATTCCAAGCACCACCCTCAATCTCTCACCACTGGACCCCAAGTCCCAATCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR TCA 72 bp | ACAGAATCCAGTGGATTGGGACTTGGGGTCCAGTGGTaGGAGATTGAGGGTGGTGCTTGGAATGTAGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: TESSGLGLGVQW*EIEGGAWNVDL Trigger: TAGGTCTACATTCCAAGCACCACCCTCAATCTCTCACCACTGGACCCCAAGTCCCAATCCACTGGATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR TCA 72 bp | TGCATTGGGAATCAGCTCCAGGGTGTGTCTGGGATATaGGATGCTGTCACTGGGCTATTGGGATCTAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: CIGNQLQGVSGI*DAVTGLLGSRL Trigger: AAGTCTAGATCCCAATAGCCCAGTGACAGCATCTCATATCCCAGACACACCCTGGAGCTGATTCCCAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR GCA 72 bp | GAGCTTCTAGAAGACTCTTTGGATGGCATGCTTCCATaGATTGGGAATCAGCTCCAGGGTGTGTCTGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: ELLEDSLDGMLP*IGNQLQGVSGI Trigger: TATCCCAGACACACCCTGGAGCTGATTCCCAATGCATGGAAGCATGCCATCCAAAGAGTCTTCTAGAAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CTAAGCTCAGAATCCAATCTTGAAGTGTGGAGGGTATaGGAATGTGGTGGGAGCCAGGGGACTTTGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSESNLEVWRV*ECGGSQGTLFS Trigger: AGAGAACAAAGTCCCCTGGCTCCCACCACATTCCCATACCCTCCACACTTCAAGATTGGATTCTGAGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | ATAGTTTTACATATCAAGTGTCAGGCTGCTGATATGTaGGGTCCAGTGGTTGGGGCTTCGAGGTCTGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IVLHIKCQAADM*GPVVGASRSGC Trigger: ACAACCAGACCTCGAAGCCCCAACCACTGGACCCCACATATCAGCAGCCTGACACTTGATATGTAAAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CAAGGTGCTTGGGAAGAAGGGTTTGGGGCCAGGGTATaGATAGTTTTACATATCAAGTGTCAGGCTGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QGAWEEGFGARV*IVLHIKCQAAD Trigger: ATCAGCAGCCTGACACTTGATATGTAAAACTATCCATACCCTGGCCCCAAACCCTTCTTCCCAAGCACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | CTGGGCTATTGGGATCTAGACTTGGGGAGTGACATTTaGGGTATAGGAGCAAAGACCTTGGAGTATGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGYWDLDLGSDI*GIGAKTLEYEG Trigger: ACCTTCATACTCCAAGGTCTTTGCTCCTATACCCCAAATGTCACTCCCCAAGTCTAGATCCCAATAGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR TCA 72 bp | TTAGGATCCACTGGTCAGGCCATCAGTCTCTGTGGTTaGAGATATCAGCGTAGGGGATACCATGATGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LGSTGQAISLCG*RYQRRGYHDED Trigger: ATCTTCATCATGGTATCCCCTACGCTGATATCTTCAACCACAGAGACTGATGGCCTGACCAGTGGATCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | GAATATGGAACCTCAAACAGAGGAAAATGCATTGGTTaGGTTAAGGGACCTGTAATCCAGGGATCCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EYGTSNRGKCIG*VKGPVIQGSRD Trigger: GTCCCTGGATCCCTGGATTACAGGTCCCTTAACCCAACCAATGCATTTTCCTCTGTTTGAGGTTCCATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR TCA 72 bp | TTGGAGTATGAAGGTGTTTGGAAGTTTGGCCTTCTATaGATGTGGTCCAGAGAAGGGGTTGAAGGAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LEYEGVWKFGLL*MWSREGVEGIW Trigger: CCAGATTCCTTCAACCCCTTCTCTGGACCACATTCATAGAAGGCCAAACTTCCAAACACCTTCATACTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR GCA 72 bp | AAAATAGACTCCGAGTCAGCTTGGGGATACTTAATTTaGATACTGGATGCTGGGTTTCATGAAGGATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KIDSESAWGYLI*ILDAGFHEGCC Trigger: ACAACATCCTTCATGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CCA 72 bp | TTGTTCTCTGGTAGAAAAATAGACTCCGAGTCAGCTTaGGGATACTTAATTTGCATACTGGATGCTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFSGRKIDSESA*GYLICILDAGF Trigger: AAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCTATTTTTCTACCAGAGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | CCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACACCCTGGCGCAACTCGTaGACGTCCACGCGGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGILWLKCGVQWYHGQDTPWRNS*TSTRPS Trigger: GGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGG...TGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | GGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGTAAGCCTGGCCAGCCCCTaGCGCAACTCGTGCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVQWYHGQDTGLGSGIWVSLASP*RNSCTS Trigger: GGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCT...TACCCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CAA 72 bp | GAGCAGGACTGGCAGTGTGAGAGGCAGGTGGTCCCCTaGGTGGTGTCCCTGACTTCCCCTGGTAGCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EQDWQCERQVVP*VVSLTSPGSSQ Trigger: TTGGGAGCTACCAGGGGAAGTCAGGGACACCACCAAGGGGACCACCTGCCTCTCACACTGCCAGTCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCTGCAGTGTCTCCTGTTaGCCCCGGATGGCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAQVWGAVVPWSGHRARICSVSC*PRMARL Trigger: CAAGCGGGCCATCCGGGGGCAACAGGAGACACTGCA...GATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGCCCACCATGGAGACCTaGGGGCCACCCTCAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGVQWYHGQDTGLGSGIWPTMET*GPPSME Trigger: CTCCATTGAGGGTGGCCCGCAGGTCTCCATGGTGGG...CCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATGCGGGCCACCCTCAATaGAGGCTTGGGCCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QVWGAVVPWSGHRARIGDAGHPQ*RLGPAF Trigger: GAATGCAGGCCCAAGCCTCCATTGAGGGTGGCCCGC...ATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGCCACGAAGCGCTCCTaGACGTGCAGTGTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWGAVVPWSGHRARIGDLATKRS*TCSVSC Trigger: ACAGGAGACACTGCACGTTCAGGAGCGCTTCGTGGC...CAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | GAATTTAGCAGCTGGGGCATGTGGGATCCACATGAGGGACCCTGGAGCTCTCGCGGGTATATGATGGTTTaGGCTGTGGCCCCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSWGMWDPHEGPWSSRGYMMV*AVAPAR Trigger: CCTGGCCGGGGCCACAGCTCAAACCATCATATACCC...GCGAGAGCTCCAGGGTCCCTCATGTGGATCCCACATGCCCCAGCTGCTAAATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | GTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCTCCCTCACCTGGATGTaGCCCCCAGAGCCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAQVWGAVVPWSGHRARISLTWM*PPEPAS Trigger: TGAAGCAGGCTCTGGGGGTCACATCCAGGTGAGGGA...GATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163442.8 |
||
| CDS-3UTR GCA 90 bp | GGATCAAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTGGTCCAGAGGAGCTGTaGCTGTCCGTGACACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGILWLKCGVQWYHGGPEEL*LSVTQR Trigger: GCGCTGTGTCACGGACAGGCACAGCTCCTCTGGACC...ACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGAAGTAGACCCACCATaGAGACCTGCGGGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGVQWYHGQDTGLGSGIWEVDPP*RPAGHP Trigger: AGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTC...CCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CAA 72 bp | AGCCACGAAGCGCTCCTGAACGTGCAGTGTCTCCTGTaGCCCCCGGATGGCCCGCTTGATCTGTTCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHEALLNVQCLL*PPDGPLDLFIS Trigger: GCTTATGAACAGATCAAGCGGGCCATCCGGGGGCAACAGGAGACACTGCACGTTCAGGAGCGCTTCGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGCAATCTGGCCACAGGTaGTGGAGATGGTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDPVAQVWGAVVPWSGHRQSGHR*WRWCHS Trigger: GCTGTGGCACCATCTCCAGCACCTGTGGCCAGATTG...CCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATCACAGGTGCTGGAGATaGTGCCACAGCCTAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVWGAVVPWSGHRARIGDHRCWR*CHSLGA Trigger: TGCTCCTAGGCTGTGGCACCATCTCCAGCACCTGTG...ATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGGGATCAAGTCCTGGGATCCCCACCATGGAGACCTTaGGCCTGCATTCGGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGASRSGCEVGDQVLGSPPWRP*ACIRVR Trigger: CCGTACCCGAATGCAGGCCCAAGGTCTCCATGGTGG...GGATCCCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAGCCCCAACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163442.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGGGATCAAGTCCTGGGATCCCAAGGCTGTGAAACATaGGCAGAAGGCGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVGASRSGCEVGDQVLGSQGCET*AEGAAP Trigger: GGGAGCAGCGCCTTCTGCTCATGTTTCACAGCCTTG...GGATCCCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAGCCCCAACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | CCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACATCGTGGCTGTACTGCTaGAGCCAGCGATTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGILWLKCGVQWYHGQDTSWLYC*SQRFFR Trigger: CCTGAAGAATCGCTGGCTTCAGCAGTACAGCCACGA...TGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGTCGTGGCTGTACTGCTaGAGCCAGCGATTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWGAVVPWSGHRARIGDLSWLYC*SQRFFR Trigger: CCTGAAGAATCGCTGGCTTCAGCAGTACAGCCACGA...CAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGGGATCAAGTCCTGGCAATCTGGCCACAGGTaGTGGAGATGGTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQWLGLRGLVVKLGIKSWQSGHR*WRWCHS Trigger: GCTGTGGCACCATCTCCAGCACCTGTGGCCAGATTG...CCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAGCCCCAACCACTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGTCGGGTACGGACCAGTaGCAGAGGGTAACTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VWGAVVPWSGHRARIGDLSGTDQ*QRVTGN Trigger: ATTGCCAGTTACCCTCTGGCACTGGTCCGTACCCGA...CAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGTACTCACAGGTGCTGGAGATaGTGCCACAGCCTAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVVPWSGHRARIGDLGTHRCWR*CHSLGA Trigger: TGCTCCTAGGCTGTGGCACCATCTCCAGCACCTGTG...AGTACCCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGTTGGGGATCAAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTCCCTCAATGGAGGCTTaGGCCTGCATTCGGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: CEVGDQVLGSCGSSVGCSPSMEA*ACIRVR Trigger: CCGTACCCGAATGCAGGCCCAAGCCTCCATTGAGGG...ACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCCCCAACTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | GTATGGATAGTTTTACATATCAAGTGTCAGGCTGCTGATATGTGGGGTCCAGTGAGGCGACCCCAGCGCTaGCGCCGCTCCGCGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWIVLHIKCQAADMWGPVRRPQR*RRSASL Trigger: AAGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCT...CACTGGACCCCACATATCAGCAGCCTGACACTTGATATGTAAAACTATCCATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | CCCAGACAAGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTGCAGTGTCTCCTGTTaGCCCCGGATGGCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRQEEGFMKATQTHKDPGCSVSC*PRMARL Trigger: CAAGCGGGCCATCCGGGGGCAACAGGAGACACTGCA...ACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCTTGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGTCGGGTACGGACCAGTaGCAGAGGGTAACTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPGILWLKCGVQWYHGQSGTDQ*QRVTGN Trigger: ATTGCCAGTTACCCTCTGGCACTGGTCCGTACCCGA...CTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| CDS-3UTR CCA 90 bp | GGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTTGCTCCAGTGAGATaGAGATACCTAGTGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GILWLKCGVQWYHGQDTGLAPVR*RYLVLG Trigger: TCCGAGCACTAGGTATCTCCATCTCACTGGAGCAAG...CCCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGAAGTAGACCCACCATaGAGACCTTGGGCCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: CGVQWYHGQDTGLGSGIWEVDPP*RPWACI Trigger: AATGCAGGCCCAAGGTCTCCATGGTGGGTCTACTTC...CCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163442.8 |
||
| 3UTR CAA 72 bp | GTCCAGTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTaGGGGATCAAGTCCTGGGATCCTGTGGCTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQWLGLRGLVVK*GIKSWDPVAQV Trigger: CACTTGAGCCACAGGATCCCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAGCCCCAACCACTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000163442.8 |
||
| 3UTR CAA 72 bp | AGAAGGCGCGGGGCCCTTCACGTTCTAAGATCCGCTTaGCACAATCCAGGAGCCCCTTGTATTGGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRRGALHVLRSA*HNPGAPCIGQF Trigger: GAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGAACGTGAAGGGCCCCGCGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGACAAGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTGGGTATATGATGGTTTaGGCTGTGGCCCCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRQEEGFMKATQTHKDPGGYMMV*AVAPAR Trigger: CCTGGCCGGGGCCACAGCTCAAACCATCATATACCC...ACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCTTGTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGAATCAATGGTCATGGTaGCATCGCGGTCCATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WDPVAQVWGAVVPWSGHRNQWSW*HRGPCC Trigger: ACAGCATGGACCGCGATGGCACCATGACCATTGATT...CCTGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGCCCCCTGCATGAATACCTTGAGTCGGTCCAGAGGAGCTGTGCCTGTCTGGTCTCGCCATTCCTaGCAATCAATGGTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQAPCMNTLSRSRGAVPVWSRHS*QSMVMV Trigger: CACCATGACCATTGATTGGCAGGAATGGCGAGACCA...GACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGGGGCCTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGACACAACGTTCTCCAGAGAGTaGAACAGAAAGTGGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGILWLKCGVQWYHGQDTTFSRE*NRKWSR Trigger: GCGAGACCACTTTCTGTTGCACTCTCTGGAGAACGT...TGTGTCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGAGTGCAACAGAAAGTaGTCTCGCCATTCCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VWGAVVPWSGHRARIGDLECNRK*SRHSCQ Trigger: TTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTC...CAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | GTGCCACAGCCTAGGAGCACGAGAATGCCTGGGTTAGCGGATTCGTGGCTGTACGAGTGCAACAGAAAGTaGTCTCGCCATTCCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPQPRSTRMPGLADSWLYECNRK*SRHSCQ Trigger: TTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTC...GTACAGCCACGAATCCGCTAACCCAGGCATTCTCGTGCTCCTAGGCTGTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGGTGCAGTGGTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGCTCGGAAGCTCTGTTaGATCTCAGAGACATCTATG | + |
|
Preference number: 4 (lower is better) Translates to: CGVQWYHGQDTGLGSGIWARKLC*ISETSM Trigger: CATAGATGTCTCTGAGATTCAACAGAGCTTCCGAGC...CCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTACCACTGCACCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | CCCAGACAAGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTCACAGGTGCTGGAGATaGTGCCACAGCCTAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRQEEGFMKATQTHKDPGHRCWR*CHSLGA Trigger: TGCTCCTAGGCTGTGGCACCATCTCCAGCACCTGTG...ACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCTTGTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR CCA 90 bp | CATGTTTCTCAGGCCCCCTGCATGAATACCTTGAGTCGGTCCAGAGGAGCTGTGGCCAATCAATGGTCATaGTGCCATCGCGGTCCATGN | + |
|
Preference number: 4 (lower is better) Translates to: HVSQAPCMNTLSRSRGAVANQWS*CHRGPX Trigger: NCATGGACCGCGATGGCACCATGACCATTGATTGGC...CACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGGGGCCTGAGAAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| 3UTR CAA 72 bp | TTGAATCATGTTTCTCAGGCCCCCTGCATGAATACCTaGAGTCGGTCCAGAGGAGCTGTGCCTGTCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNHVSQAPCMNT*SRSRGAVPVRD Trigger: GTCACGGACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGGGGCCTGAGAAACATGATTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTACCAATCTGGCCACAGGTaGTGGAGATGGTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEGFMKATQTHKDPGSSYQSGHR*WRWCHS Trigger: GCTGTGGCACCATCTCCAGCACCTGTGGCCAGATTG...GTAGGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR CCA 90 bp | GGATCAAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTGTAAGTTTCTCTTCCTaGGAGAACTCATCAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGILWLKCGVQWYHGVSFSS*ENSSGT Trigger: GGTGCCTGATGAGTTCTCCCAGGAAGAGAAACTTAC...ACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTGGAACCCAAGTGGCTaGCTTTCCTACCCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEEGFMKATQTHKDPGSSWNPSG*LSYPSL Trigger: GAGGCTGGGGTAGGAAAGCCAGCCACTTGGGTTCCA...GGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCCAGGTGGAACCCAAGTaGCTGGCTTTCCTACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEEGFMKATQTHKDPGSSQVEPK*LAFLPQ Trigger: CTGGGGTAGGAAAGCCAGCCACTTGGGTTCCACCTG...GGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTCGTGGCTGTACTGCTaGAGCCAGCGATTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEEGFMKATQTHKDPGSSSWLYC*SQRFFR Trigger: CCTGAAGAATCGCTGGCTTCAGCAGTACAGCCACGA...GGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR GCA 90 bp | GTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGTACTGGGGTCCAGTCCAGGACTGTAGAATaGTTCCAGAAATACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPWSGHRARIGDLGTGVQSRTVE*FQKYRT Trigger: TGTCCTGTATTTCTGGAAGCATTCTACAGTCCTGGA...CTGGACCCCAGTACCCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTACTCGGGTACGGACCAGTaGCAGAGGGTAACTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EEGFMKATQTHKDPGSSYSGTDQ*QRVTGN Trigger: ATTGCCAGTTACCCTCTGGCACTGGTCCGTACCCGA...GTAGGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTAGCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTGCCAATCAATGGTCATaGTGCCATCGCGGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLAEVQCSIHMSHSLLPGANQWS*CHRGPC Trigger: GCATGGACCGCGATGGCACCATGACCATTGATTGGC...ACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGCTAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | CATGCTTCCATGCATTGGGAATCAGCTCCAGGGTGTGTCTGGGATATGAGATGCAAGACACCCCCTTCTTaGATCATGTTTCTCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HASMHWESAPGCVWDMRCKTPPS*IMFLRP Trigger: GGGCCTGAGAAACATGATTCAAGAAGGGGGTGTCTT...GCATCTCATATCCCAGACACACCCTGGAGCTGATTCCCAATGCATGGAAGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTACCTCCATGGGGTATATaGTGGTTTGAGCTGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRVYEGHPNSQGSWFFLPPWGI*WFELWP Trigger: GGGCCACAGCTCAAACCATCATATACCCCATGGAGG...TAGGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
||
| CDS-3UTR GCA 90 bp | GGATCAAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTAGGATTTTCTCTGCTTaGTCCAGTGAGATGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGILWLKCGVQWYHGRIFSA*SSEMEI Trigger: TATCTCCATCTCACTGGAGCAAGCAGAGAAAATCCT...ACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | ATTCGTGGCTGTACTGCTGAAGCCAGCGATTCTTCAGGGTCTCGTAGACAGCTAACGTTCTCCAGAGAGTaGAACAGAAAGTGGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGCTAEASDSSGSRRQLTFSRE*NRKWSR Trigger: GCGAGACCACTTTCTGTTGCACTCTCTGGAGAACGT...TAGCTGTCTACGAGACCCTGAAGAATCGCTGGCTTCAGCAGTACAGCCACGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| 3UTR CAA 72 bp | CCACTGGTCTGGCGTCTTGAGCTTCTAGAAGACTCTTaGGATGGCATGCTTCCATGCATTGGGAATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVWRLELLEDS*DGMLPCIGNQL Trigger: GAGCTGATTCCCAATGCATGGAAGCATGCCATCCAAAGAGTCTTCTAGAAGCTCAAGACGCCAGACCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CAA 72 bp | TGGAGGGTATGGGAATGTGGTGGGAGCCAGGGGACTTaGTTCTCTGGTAGAAAAATAGACTCCGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WRVWECGGSQGT*FSGRKIDSESA Trigger: AGCTGACTCGGAGTCTATTTTTCTACCAGAGAACAAAGTCCCCTGGCTCCCACCACATTCCCATACCCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | AGACTCCGAGTCAGCTTGGGGATACTTAATTTGCATACTGGATGCTGGGTTTCATTCCGGTCAAGGCTGTaGAACATGAGCAGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRVSLGILNLHTGCWVSFRSRL*NMSRRR Trigger: GCGCCTTCTGCTCATGTTTCACAGCCTTGACCGGAA...TGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | GAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCTGAGGCCTGAGCAGGACTGCCATCGCGGTCCATaGTGTGTAGGATTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGCCVLVLDCNFLRPEQDCHRGP*CVGFSL Trigger: CAGAGAAAATCCTACACAGCATGGACCGCGATGGCA...GTCCTGCTCAGGCCTCAGAAAGTTGCAATCAAGGACCAACACACAACATCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | GAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCTGAGGCCTGAGCAGGACTGGTCTCGCCATTCCTaGCAATCAATGGTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGCCVLVLDCNFLRPEQDWSRHS*QSMVMV Trigger: CACCATGACCATTGATTGGCAGGAATGGCGAGACCA...GTCCTGCTCAGGCCTCAGAAAGTTGCAATCAAGGACCAACACACAACATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR TCA 90 bp | GATGCTGGGTTTCATGAAGGATGTTGTGTGTTGGTCCTTGATTGCAACTTTCTGCCTCCATGGGGTATATaGTGGTTTGAGCTGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DAGFHEGCCVLVLDCNFLPPWGI*WFELWP Trigger: GGGCCACAGCTCAAACCATCATATACCCCATGGAGG...CAGAAAGTTGCAATCAAGGACCAACACACAACATCCTTCATGAAACCCAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CAA 72 bp | AGTTTGGCCTTCTATGAATGTGGTCCAGAGAAGGGGTaGAAGGAATCTGGGATCTGGAATTTAGCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAFYECGPEKG*KESGIWNLAAG Trigger: CCCAGCTGCTAAATTCCAGATCCCAGATTCCTTCAACCCCTTCTCTGGACCACATTCATAGAAGGCCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS-3UTR GCA 90 bp | ATTCGTGGCTGTACTGCTGAAGCCAGCGATTCTTCAGGGTCTCGTAGACAGCTAAACAGGGGTGTAGAATaGTTCCAGAAATACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IRGCTAEASDSSGSRRQLNRGVE*FQKYRT Trigger: TGTCCTGTATTTCTGGAAGCATTCTACACCCCTGTT...TAGCTGTCTACGAGACCCTGAAGAATCGCTGGCTTCAGCAGTACAGCCACGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
||
| 3UTR CAA 72 bp | GAGCAAAGACCTTGGAGTATGAAGGTGTTTGGAAGTTaGGCCTTCTATGAATGTGGTCCAGAGAAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQRPWSMKVFGS*AFYECGPEKGL Trigger: CAACCCCTTCTCTGGACCACATTCATAGAAGGCCAAACTTCCAAACACCTTCATACTCCAAGGTCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| 3UTR CAA 72 bp | TTGGGGAGTGACATTTGGGGTATAGGAGCAAAGACCTaGGAGTATGAAGGTGTTTGGAAGTTTGGCCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGSDIWGIGAKT*EYEGVWKFGLL Trigger: TAGAAGGCCAAACTTCCAAACACCTTCATACTCCAAGGTCTTTGCTCCTATACCCCAAATGTCACTCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS CCA 90 bp | AGGAGACACCCTGCTGTGCACGGTCCGGATCTCCCCTTCCCAGCCTaGCCAGCCCCTGGCGCAACTCGTGCACGTCCACGCGGCCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRHPAVHGPDLPFPA*PAPGATRARPRGRP Trigger: AGGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGACCGTGCACAGCAGGGTGTCTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS GCA 90 bp | CCAGCCCCTGGCGCAACTCGTGCACGTCCACGCGGCCGTCCTTGTTaGTGTCTAGTTCCTCGAACAGGCGACCCCAGCGCTGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPGATRARPRGRPC*CLVPRTGDPSAAAA Trigger: AGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
||
| CDS GCA 90 bp | GCCACCATCAGGATCAGCATCCCAGTCAGAGGAGACACCCTGCTGTaGACGGTCCGGATCTCCCCTTCCCAGCCTGGCCAGCCCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ATIRISIPVRGDTLL*TVRISPSQPGQPLA Trigger: CGCCAGGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGACCGTGCACAGCAGGGTGTCTCCTCTGACTGGGATGCTGATCCTGATGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 90 bp | TCCGGATCTCCCCTTCCCAGCCTGGCCAGCCCCTGGCGCAACTCGTaGACGTCCACGCGGCCGTCCTTGTTGCTGTCTAGTTCCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSPLPSLASPWRNS*TSTRPSLLLSSSSN Trigger: GTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 90 bp | CTGAGGCCACCATCAGGATCAGCATCCCAGTCAGAGGAGACACCCTaGTGTGCACGGTCCGGATCTCCCCTTCCCAGCCTGGCCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LRPPSGSASQSEETP*CARSGSPLPSLASP Trigger: GGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGACCGTGCACAGCAGGGTGTCTCCTCTGACTGGGATGCTGATCCTGATGGTGGCCTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 90 bp | CCCTCCTGGGACAGGATGTGTCGAAGTAGACCCACCATGGAGACCTaGGGGCCACCCTCAATGGAGGCTTGGGCCTGCATTCGGGTACGG | + |
|
Preference number: 5 (lower is better) Translates to: PSWDRMCRSRPTMET*GPPSMEAWACIRVR Trigger: CCGTACCCGAATGCAGGCCCAAGCCTCCATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTCGACACATCCTGTCCCAGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS GCA 90 bp | GGAGCAGGTGGAACCCAAGTGGCTGGCTTTCCTACCCCAGCCTCCTaGCCACACTTCTCACCTTGGGCCTGCATTCGGGTACGGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAGGTQVAGFPTPAS*PHFSPWACIRVRTS Trigger: ACTGGTCCGTACCCGAATGCAGGCCCAAGGTGAGAAGTGTGGGCAGGAGGCTGGGGTAGGAAAGCCAGCCACTTGGGTTCCACCTGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
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| CDS CCA 90 bp | CCCATACACCCTCCTGGGACAGGATGTGTCGAAGTAGACCCACCATaGAGACCTGCGGGCCACCCTCAATGGAGGCTTGGGCCTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PIHPPGTGCVEVDPP*RPAGHPQWRLGPAF Trigger: GAATGCAGGCCCAAGCCTCCATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTCGACACATCCTGTCCCAGGAGGGTGTATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGGGATCAAGTCCTGGGAGTGCAGTGTCTCCTGTaGCCCCCGGATGGCCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVVGASRSGCEVGDQVLGVQCLL*PPDGPL Trigger: AAGCGGGCCATCCGGGGGCAACAGGAGACACTGCAC...TCCCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAGCCCCAACCACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS-3UTR CAA 90 bp | GTACCATGGTCAGGACACAGGGCTAGGATCGGGGATTTGGGTACTGGGGTCCAGCCCACCATGGAGACCTaGGGCCTGCATTCGGGTACG | + |
|
Preference number: 5 (lower is better) Translates to: VPWSGHRARIGDLGTGVQPTMET*GLHSGT Trigger: CGTACCCGAATGCAGGCCCAAGGTCTCCATGGTGGG...CTGGACCCCAGTACCCAAATCCCCGATCCTAGCCCTGTGTCCTGACCATGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163442.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCATGGTCAGGATCCACGCGGCCGTCCTaGTTGCTGTCTAGTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KSWDPVAQVWGAVVPWSGSTRPS*LLSSSS Trigger: CGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGA...TCCTGACCATGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS-3UTR CAA 90 bp | TTGGGGATCAAGTCCTGGGATCCTGTGGCTCAAGTGTGGGGTGCAGTGGTACCAACCCTCAATGGAGGCTaGGGCCTGCATTCGGGTACG | + |
|
Preference number: 5 (lower is better) Translates to: LGIKSWDPVAQVWGAVVPTLNGG*GLHSGT Trigger: CGTACCCGAATGCAGGCCCAAGCCTCCATTGAGGGT...TGGTACCACTGCACCCCACACTTGAGCCACAGGATCCCAGGACTTGATCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 90 bp | AGGCCCCCTAGAATGTTAAGCCGGTTGGACTTTGAGGCGTGGACCTaGATGAATACCTTGAGTCGGTCCAGAGGAGCTGTGCCTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPPRMLSRLDFEAWT*MNTLSRSRGAVPVR Trigger: ACGGACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACATTCTAGGGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS GCA 90 bp | TCCACGTTCTCCAGAGAGTGCAACAGAAAGTGGTCTCGCCATTCCTaGCAATCAATGGTCATGGTGCCATCGCGGTCCATGCTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: STFSRECNRKWSRHS*QSMVMVPSRSMLCR Trigger: CCTACACAGCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTCTCTGGAGAACGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CCA 90 bp | TTTCTCAGGCCCCCTAGAATGTTAAGCCGGTTGGACTTTGAGGCGTaGACCTGCATGAATACCTTGAGTCGGTCCAGAGGAGCTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLRPPRMLSRLDFEA*TCMNTLSRSRGAVP Trigger: AGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACATTCTAGGGGGCCTGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGGTTGGGGCTTCGAGGTCTGGTTGTGAAGTTGGGGATCAAGTCCTGGGAATCTATGTGACCATCTaGGTTCCGGTCAAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVVGASRSGCEVGDQVLGIYVTI*VPVKAV Trigger: CACAGCCTTGACCGGAACCAAGATGGTCACATAGAT...TCCCAGGACTTGATCCCCAACTTCACAACCAGACCTCGAAGCCCCAACCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS-3UTR CAA 90 bp | GTCCTAGCTGAGGTGCAATGCAGCATTCATATGTCCCATTCCTTACTGCCTGGTGGGGTATATGATGGTTaGAGCTGTGGCCCCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLAEVQCSIHMSHSLLPGGVYDG*SCGPGQ Trigger: CTGGCCGGGGCCACAGCTCAAACCATCATATACCCC...ACCAGGCAGTAAGGAATGGGACATATGAATGCTGCATTGCACCTCAGCTAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS-3UTR CAA 90 bp | GGAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTACACCCCACACTTCTCACCTaGGGCCTGCATTCGGGTACG | + |
|
Preference number: 5 (lower is better) Translates to: GRVYEGHPNSQGSWFFLHPTLLT*GLHSGT Trigger: CGTACCCGAATGCAGGCCCAAGGTGAGAAGTGTGGG...GTGTAGGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGTTTATGAAGGCCACCCAAACTCACAAGGATCCTGGTTCTTCCTACACAGGGGTATATGATGGTTaGAGCTGTGGCCCCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGFMKATQTHKDPGSSYTGVYDG*SCGPGQ Trigger: CTGGCCGGGGCCACAGCTCAAACCATCATATACCCC...TGTGTAGGAAGAACCAGGATCCTTGTGAGTTTGGGTGGCCTTCATAAACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171528.2 |
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| CDS GCA 90 bp | CTCGCCATTCCTGCCAATCAATGGTCATGGTGCCATCGCGGTCCATaGTGTGTAGGATTTTCTCTGCTTGCTCCAGTGAGATGGAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: LAIPANQWSWCHRGP*CVGFSLLAPVRWRY Trigger: GTATCTCCATCTCACTGGAGCAAGCAGAGAAAATCCTACACAGCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 90 bp | GCAACAGAAAGTGGTCTCGCCATTCCTGCCAATCAATGGTCATGGTaGCATCGCGGTCCATGCTGTGTAGGATTTTCTCTGCTTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ATESGLAIPANQWSW*HRGPCCVGFSLLAP Trigger: TGGAGCAAGCAGAGAAAATCCTACACAGCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CCA 90 bp | CCAGAGAGTGCAACAGAAAGTGGTCTCGCCATTCCTGCCAATCAATaGTCATGGTGCCATCGCGGTCCATGCTGTGTAGGATTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PESATESGLAIPANQ*SWCHRGPCCVGFSL Trigger: CAGAGAAAATCCTACACAGCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CCA 90 bp | TCACGTTCTAAGATCCGCTTTGCACAATCCAGGAGCCCCTTGTATTaGCCAGTTCTGCGTAGAGTCAGCCGAGTCTCCATGGGGTATATG | + |
|
Preference number: 5 (lower is better) Translates to: SRSKIRFAQSRSPLY*PVLRRVSRVSMGYM Trigger: CATATACCCCATGGAGACTCGGCTGACTCTACGCAGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGAACGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170015.8 |
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| CDS CCA 90 bp | CGCGGTCCATGCTGTGTAGGATTTTCTCTGCTTGCTCCAGTGAGATaGAGATACCTAGTGCTCGGAAGCTCTGTTGAATCTCAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: RGPCCVGFSLLAPVR*RYLVLGSSVESQRH Trigger: ATGTCTCTGAGATTCAACAGAGCTTCCGAGCACTAGGTATCTCCATCTCACTGGAGCAAGCAGAGAAAATCCTACACAGCATGGACCGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS-3UTR CAA 90 bp | TCAGAATCCAATCTTGAAGTGTGGAGGGTATGGGAATGTGGTGGGAGCCAGGGGTGCTCGGAAGCTCTGTaGAATCTCAGAGACATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SESNLEVWRVWECGGSQGCSEAL*NLRDIY Trigger: ATAGATGTCTCTGAGATTCAACAGAGCTTCCGAGCA...CCCCTGGCTCCCACCACATTCCCATACCCTCCACACTTCAAGATTGGATTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS-3UTR CAA 90 bp | AGACTCCGAGTCAGCTTGGGGATACTTAATTTGCATACTGGATGCTGGGTTTCAACCTGCATGAATACCTaGAGTCGGTCCAGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLRVSLGILNLHTGCWVSTCMNT*SRSRGA Trigger: AGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGT...TGAAACCCAGCATCCAGTATGCAAATTAAGTATCCCCAAGCTGACTCGGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CCA 72 bp | CCTGCTGTGCACGGTCCGGATCTCCCCTTCCCAGCCTaGCCAGCCCCTGGCGCAACTCGTGCACGTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: PAVHGPDLPFPA*PAPGATRARPR Trigger: GCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGACCGTGCACAGCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CAA 90 bp | GCCAGCCCCTGGCGCAACTCGTGCACGTCCACGCGGCCGTCCTTGTaGCTGTCTAGTTCCTCGAACAGGCGACCCCAGCGCTGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPWRNSCTSTRPSL*LSSSSNRRPQRCRR Trigger: GCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CAA 90 bp | CTGGCCAGCCCCTGGCGCAACTCGTGCACGTCCACGCGGCCGTCCTaGTTGCTGTCTAGTTCCTCGAACAGGCGACCCCAGCGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LASPWRNSCTSTRPS*LLSSSSNRRPQRCR Trigger: GCGGCAGCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 72 bp | GGCGCAACTCGTGCACGTCCACGCGGCCGTCCTTGTTaGTGTCTAGTTCCTCGAACAGGCGACCCCAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GATRARPRGRPC*CLVPRTGDPSA Trigger: AGCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CAA 72 bp | TGGCGCAACTCGTGCACGTCCACGCGGCCGTCCTTGTaGCTGTCTAGTTCCTCGAACAGGCGACCCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: WRNSCTSTRPSL*LSSSSNRRPQR Trigger: GCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CAA 72 bp | CCCTGGCGCAACTCGTGCACGTCCACGCGGCCGTCCTaGTTGCTGTCTAGTTCCTCGAACAGGCGACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PWRNSCTSTRPS*LLSSSSNRRPQ Trigger: CTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAAGGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 72 bp | AGGATCAGCATCCCAGTCAGAGGAGACACCCTGCTGTaGACGGTCCGGATCTCCCCTTCCCAGCCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RISIPVRGDTLL*TVRISPSQPGQ Trigger: CTGGCCAGGCTGGGAAGGGGAGATCCGGACCGTGCACAGCAGGGTGTCTCCTCTGACTGGGATGCTGATCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CCA 72 bp | GTAGACCCACCATGGAGACCTGCGGGCCACCCTCAATaGAGGCTTGGGCCTGCATTCGGGTACGGACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VDPPWRPAGHPQ*RLGPAFGYGPV Trigger: CACTGGTCCGTACCCGAATGCAGGCCCAAGCCTCCATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS CCA 72 bp | CCTCCTGGGACAGGATGTGTCGAAGTAGACCCACCATaGAGACCTGCGGGCCACCCTCAATGGAGGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGTGCVEVDPP*RPAGHPQWRLG Trigger: CCCAAGCCTCCATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTCGACACATCCTGTCCCAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS GCA 72 bp | GACAGGATGTGTCGAAGTAGACCCACCATGGAGACCTaGGGGCCACCCTCAATGGAGGCTTGGGCCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: DRMCRSRPTMET*GPPSMEAWACI Trigger: AATGCAGGCCCAAGCCTCCATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTCGACACATCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS CCA 72 bp | ACAGGATGTGTCGAAGTAGACCCACCATGGAGACCTTaGGCCTGCATTCGGGTACGGACCAGTGCCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGCVEVDPPWRP*ACIRVRTSARG Trigger: CCCTCTGGCACTGGTCCGTACCCGAATGCAGGCCCAAGGTCTCCATGGTGGGTCTACTTCGACACATCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163442.8 |
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| CDS TCA 72 bp | TTTAGGGGGACAGGCTCCCTGTCCCTCACCTGGATGTaGCCCCCAGAGCCTGCTTCATGTTCTCGTAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: FRGTGSLSLTWM*PPEPASCSRRP Trigger: TGGTCTACGAGAACATGAAGCAGGCTCTGGGGGTCACATCCAGGTGAGGGACAGGGAGCCTGTCCCCCTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163442.8 |
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| CDS TCA 72 bp | TTCTGCGTAGAGTCAGCCGAGTCTCCATGGGGTATATaGTGGTTTGAGCTGTGGCCCCGGCCAGGGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: FCVESAESPWGI*WFELWPRPGNQ Trigger: CTGGTTCCCTGGCCGGGGCCACAGCTCAAACCATCATATACCCCATGGAGACTCGGCTGACTCTACGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170015.8 |
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| CDS CAA 72 bp | CGGTTGGACTTTGAGGCGTGGACCTGCATGAATACCTaGAGTCGGTCCAGAGGAGCTGTGCCTGTCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLDFEAWTCMNT*SRSRGAVPVRD Trigger: GTCACGGACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CAA 90 bp | ATGTTAAGCCGGTTGGACTTTGAGGCGTGGACCTGCATGAATACCTaGAGTCGGTCCAGAGGAGCTGTGCCTGTCCGTGACACAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MLSRLDFEAWTCMNT*SRSRGAVPVRDTAP Trigger: TGGCGCTGTGTCACGGACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS TCA 72 bp | TGTGACCATCTTGGTTCCGGTCAAGGCTGTGAAACATaGGCAGAAGGCGCTGCTCCCGTTCCTGCAGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CDHLGSGQGCET*AEGAAPVPAGS Trigger: GCTACCTGCAGGAACGGGAGCAGCGCCTTCTGCTCATGTTTCACAGCCTTGACCGGAACCAAGATGGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 72 bp | TCCAGAGAGTGCAACAGAAAGTGGTCTCGCCATTCCTaGCAATCAATGGTCATGGTGCCATCGCGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRECNRKWSRHS*QSMVMVPSRSM Trigger: CATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTCTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000171128.2 |
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| CDS CCA 72 bp | GCAACAGAAAGTGGTCTCGCCATTCCTGCCAATCAATaGTCATGGTGCCATCGCGGTCCATGCTGTGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ATESGLAIPANQ*SWCHRGPCCVG Trigger: TCCTACACAGCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS CCA 72 bp | CCCCCTAGAATGTTAAGCCGGTTGGACTTTGAGGCGTaGACCTGCATGAATACCTTGAGTCGGTCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPRMLSRLDFEA*TCMNTLSRSRG Trigger: TCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACATTCTAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS GCA 72 bp | CCATCGCGGTCCATGCTGTGTAGGATTTTCTCTGCTTaGTCCAGTGAGATGGAGATACCTAGTGCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSRSMLCRIFSA*SSEMEIPSARK Trigger: CTTCCGAGCACTAGGTATCTCCATCTCACTGGAGCAAGCAGAGAAAATCCTACACAGCATGGACCGCGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 72 bp | AGTGGTCTCGCCATTCCTGCCAATCAATGGTCATGGTaGCATCGCGGTCCATGCTGTGTAGGATTTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLAIPANQWSW*HRGPCCVGFSL Trigger: CAGAGAAAATCCTACACAGCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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| CDS GCA 72 bp | AGAATGTTAAGCCGGTTGGACTTTGAGGCGTGGACCTaGATGAATACCTTGAGTCGGTCCAGAGGAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RMLSRLDFEAWT*MNTLSRSRGAV Trigger: CACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040280.14 ENSMUST00000170015.8 |
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| CDS GCA 72 bp | CACCGATGTCCAGGACCTGAGAACAGGGGTGTAGAATaGTTCCAGAAATACAGGACATCCTCCACGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HRCPGPENRGVE*FQKYRTSSTFS Trigger: GGAGAACGTGGAGGATGTCCTGTATTTCTGGAAGCATTCTACACCCCTGTTCTCAGGTCCTGGACATCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171128.2 |
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| CDS GCA 72 bp | ACCGTCAGGCATTCACCGATGTCCAGGACTGTAGAATaGTTCCAGAAATACAGGACATCCTCCACGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVRHSPMSRTVE*FQKYRTSSTFS Trigger: GGAGAACGTGGAGGATGTCCTGTATTTCTGGAAGCATTCTACAGTCCTGGACATCGGTGAATGCCTGACGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040280.14 |
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