Pregenerated sensors for SLC25A21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035472Ensembl transcript IDs: ENSMUST00000044634.12, ENSMUST00000110680.3, ENSMUST00000217690.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCTTATCTTCTTTTCCTaGGGATGCAGAGCTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: KTLEQALFLSTLSSPLNGLIFFS*GCRAVL Trigger: CAAAACAGCTCTGCATCCCCAGGAAAAGAAGATAAG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTTCACTTTTaGAACGTTTGCCACTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: EQALFKACCDLCVCVCVCMCFHF*NVCHLV Trigger: CACTAAGTGGCAAACGTTTCAAAAGTGAAAACACAT...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| 3UTR-3UTR GCA 90 bp | GCTACTGGAGAAGCATCATTATATAGTGCATACATAAGAATAAGCTTTGGGTATTTTCTTTTTCTAGAGTaGATATTAGTGCAAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: ATGEASLYSAYIRISFGYFLFLE*ILVQEC Trigger: GCACTCTTGCACTAATATGCACTCTAGAAAAAGAAA...ATACCCAAAGCTTATTCTTATGTATGCACTATATAATGATGCTTCTCCAGTAGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| 3UTR-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGGGATGCAGAGCTGTTTaGTCAAGAGGAAATCGCTTC | + |
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Preference number: 3 (lower is better) Translates to: KTLEQALFLSTLSSPLNGGCRAV*SRGNRF Trigger: GAAGCGATTTCCTCTTGACAAAACAGCTCTGCATCC...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTGGATGCAGAGCTGTTTaGTCAAGAGGAAATCGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GKDVQQKALYVYSVCQKPGCRAV*SRGNRF Trigger: GAAGCGATTTCCTCTTGACAAAACAGCTCTGCATCC...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| 3UTR-3UTR CAA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTACACTGGAACAGGCTTaGTTCCTGAGCACGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EQALFKACCDLCVCVCVCTLEQA*FLSTLS Trigger: AGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGT...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| 3UTR-3UTR CAA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTGTTTTGGTGGTGAGATaGCCTCTAGCAGAAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: GKDVQQKALYVYSVCQKPVLVVR*PLAEIP Trigger: GGGTATTTCTGCTAGAGGCAATCTCACCACCAAAAC...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| 3UTR-3UTR CAA 90 bp | GCTACTGGAGAAGCATCATTATATAGTGCATACATAAGAATAAGCTTTGGGTATTTAGTGCAAGAGTGCTaGGAAATGCTAAAGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ATGEASLYSAYIRISFGYLVQEC*EMLKNV Trigger: CACATTCTTTAGCATTTCCAAGCACTCTTGCACTAA...ATACCCAAAGCTTATTCTTATGTATGCACTATATAATGATGCTTCTCCAGTAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGTCTCCAGGAACTGGCTaGGGCCCTTGGATCCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGSPGTG*GPWIRL Trigger: GAGTCGGATCCAAGGGCCCCAGCCAGTTCCTGGAGA...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGAATTTCTACAAGACCTaGAGACCCTCCGGCCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGNFYKT*RPSGRD Trigger: GTCGCGGCCGGAGGGTCTGCAGGTCTTGTAGAAATT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCCTTTGTTGAGGCCCTaGAACCCCAAGCCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGPLLRP*NPKPSF Trigger: GAAGGAAGGCTTGGGGTTCCAGGGCCTCAACAAAGG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGACTGGCTGGGGCCCTTaGATCCGACTCTTTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGTGWGP*IRLFAT Trigger: TGTTGCAAAGAGTCGGATCCAAGGGCCCCAGCCAGT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCATCACCCCACCACCTaGTCCAAGTCTCATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGHHPTT*SKSHHL Trigger: AAGGTGATGAGACTTGGACCAGGTGGTGGGGTGATG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGTCTGCACCTGGAACCTaGTTTTCACCACATCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGSAPGT*FSPHRE Trigger: CTCTCGATGTGGTGAAAACCAGGTTCCAGGTGCAGA...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTTCTCCAGGAACTGGCTaGGGCCCTTGGATCCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GKDVQQKALYVYSVCQKPSPGTG*GPWIRL Trigger: GAGTCGGATCCAAGGGCCCCAGCCAGTTCCTGGAGA...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGGTGACGTCCCAGAGTTaGTGTCAATCCTTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGVTSQS*CQSFVE Trigger: CTCAACAAAGGATTGACAGCAACTCTGGGACGTCAC...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGACACTTCTCTGCACCTaGAACCTGGTTTTCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGTLLCT*NLVFTT Trigger: TGTGGTGAAAACCAGGTTCCAGGTGCAGAGAAGTGT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGTCTGTTACACTTCTCTaGACCTGGAACCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGSVTLL*TWNLVF Trigger: GAAAACCAGGTTCCAGGTGCAGAGAAGTGTAACAGA...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR TCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGGATGAAGACAATGGGTaGCTCACTTGTATCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGDEDNG*LTCINI Trigger: GATGTTGATACAAGTGAGTCACCCATTGTCTTCATC...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGACCACATCGAGAGGATaGATCAGGCAAATTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGTTSRG*IRQIST Trigger: TGTAGAAATTTGCCTGATGCATCCTCTCGATGTGGT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGAAGTTCCGATTGACTTaGAAGCCAACTTTTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGKFRLT*KPTFTT Trigger: GGTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGTTGGATCCGACTCTTTaGAACATCAAAGGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGLDPTL*NIKGDV Trigger: AACATCCCCTTTGATGTTGCAAAGAGTCGGATCCAA...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGGTTTTCCTGCAGCCATaGATAGGTGTATTCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGVFLQP*IGVFIH Trigger: GTGTATGAATACACCTATGCATGGCTGCAGGAAAAC...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTCCTTTGTTGAGGCCCTaGAACCCCAAGCCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: EQALFKACCDLCVCVCVCPLLRP*NPKPSF Trigger: GAAGGAAGGCTTGGGGTTCCAGGGCCTCAACAAAGG...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR TCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCAAAATAAACCATGTTaGAAATTCCGTGACGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGQNKPC*KFRDVP Trigger: TGGGACGTCACGGAATTTTCAACATGGTTTATTTTG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR TCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCTTGTATCAACATCATaGTGTGTATTCACACAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGLVSTS*CVFTQA Trigger: GGCTTGTGTGAATACACATCATGATGTTGATACAAG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGAGATCATCTGGAAGCTaGCTCTTACAGTTCTATAAC | + |
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Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGRSSGS*LLQFYN Trigger: GTTATAGAACTGTAAGAGGCAGCTTCCAGATGATCT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGGGTAGAAAACTTGACTaGTCTTTTTGGTGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGGRKLD*SFWCFS Trigger: GCTGAAACACCAAAAAGAGCAGTCAAGTTTTCTACC...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR GCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGGCAAAAGTAGATGGTTaGTCTTTGAACAAGTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGAKVDG*SLNKFR Trigger: TCGGAACTTGTTCAAAGAGCAACCATCTACTTTTGC...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTCATCACCCCACCACCTaGTCCAAGTCTCATCACCTT | + |
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Preference number: 4 (lower is better) Translates to: EQALFKACCDLCVCVCVCHHPTT*SKSHHL Trigger: AAGGTGATGAGACTTGGACCAGGTGGTGGGGTGATG...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTTCTGCACCTGGAACCTaGTTTTCACCACATCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: EQALFKACCDLCVCVCVCSAPGT*FSPHRE Trigger: CTCTCGATGTGGTGAAAACCAGGTTCCAGGTGCAGA...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CCA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGAGTTCTATAACTTTGTaGGTCTGTTACACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEQALFLSTLSSPLNGSSITL*VCYTSL Trigger: CAGAGAAGTGTAACAGACCCACAAAGTTATAGAACT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| 3UTR CAA 72 bp | GTTTTATTTCCCTACATCCTTTTTAAGGATGGGTGTTaGGAGGCATATTCAGGCAACAGAGAAGCATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: VLFPYILFKDGC*EAYSGNREASP Trigger: GGGGGATGCTTCTCTGTTGCCTGAATATGCCTCCAAACACCCATCCTTAAAAAGGATGTAGGGAAATAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTTCTGTTACACTTCTCTaGACCTGGAACCTGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GKDVQQKALYVYSVCQKPSVTLL*TWNLVF Trigger: GAAAACCAGGTTCCAGGTGCAGAGAAGTGTAACAGA...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CCA 90 bp | GCTACTGGAGAAGCATCATTATATAGTGCATACATAAGAATAAGCTTTGGGTATACTGGCTGGGGCCCTTaGATCCGACTCTTTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: ATGEASLYSAYIRISFGYTGWGP*IRLFAT Trigger: TGTTGCAAAGAGTCGGATCCAAGGGCCCCAGCCAGT...ATACCCAAAGCTTATTCTTATGTATGCACTATATAATGATGCTTCTCCAGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTACCACATCGAGAGGATaGATCAGGCAAATTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: GKDVQQKALYVYSVCQKPTTSRG*IRQIST Trigger: TGTAGAAATTTGCCTGATGCATCCTCTCGATGTGGT...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR TCA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTCAAAATAAACCATGTTaGAAATTCCGTGACGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GKDVQQKALYVYSVCQKPQNKPC*KFRDVP Trigger: TGGGACGTCACGGAATTTTCAACATGGTTTATTTTG...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTTTGGATCCGACTCTTTaGAACATCAAAGGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQALFKACCDLCVCVCVCLDPTL*NIKGDV Trigger: AACATCCCCTTTGATGTTGCAAAGAGTCGGATCCAA...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTTTTCCTGCAGCCATaGATAGGTGTATTCATACAC | + |
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Preference number: 4 (lower is better) Translates to: EQALFKACCDLCVCVCVCVFLQP*IGVFIH Trigger: GTGTATGAATACACCTATGCATGGCTGCAGGAAAAC...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | AGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTAGATCATCTGGAAGCTaGCTCTTACAGTTCTATAAC | + |
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Preference number: 4 (lower is better) Translates to: RRYLKHVVICVCVCVCVCRSSGS*LLQFYN Trigger: GTTATAGAACTGTAAGAGGCAGCTTCCAGATGATCT...ACACACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GAACAGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGGTAGAAAACTTGACTaGTCTTTTTGGTGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQALFKACCDLCVCVCVCGRKLD*SFWCFS Trigger: GCTGAAACACCAAAAAGAGCAGTCAAGTTTTCTACC...ACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | AGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAAAGTAGATGGTTaGTCTTTGAACAAGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRYLKHVVICVCVCVCVCAKVDG*SLNKFR Trigger: TCGGAACTTGTTCAAAGAGCAACCATCTACTTTTGC...ACACACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GCTACTGGAGAAGCATCATTATATAGTGCATACATAAGAATAAGCTTTGGGTATGTGACGTCCCAGAGTTaGTGTCAATCCTTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATGEASLYSAYIRISFGYVTSQS*CQSFVE Trigger: CTCAACAAAGGATTGACAGCAACTCTGGGACGTCAC...ATACCCAAAGCTTATTCTTATGTATGCACTATATAATGATGCTTCTCCAGTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CCA 90 bp | AGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTCTATAACTTTGTaGGTCTGTTACACTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RRYLKHVVICVCVCVCVCSSITL*VCYTSL Trigger: CAGAGAAGTGTAACAGACCCACAAAGTTATAGAACT...ACACACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR GCA 90 bp | GCTACTGGAGAAGCATCATTATATAGTGCATACATAAGAATAAGCTTTGGGTATAAGTTCCGATTGACTTaGAAGCCAACTTTTACCACC | + |
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Preference number: 4 (lower is better) Translates to: ATGEASLYSAYIRISFGYKFRLT*KPTFTT Trigger: GGTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTT...ATACCCAAAGCTTATTCTTATGTATGCACTATATAATGATGCTTCTCCAGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| 3UTR CAA 72 bp | GAGTGCTTGGAAATGCTAAAGAATGTGTTTTCACTTTaGAAACGTTTGCCACTTAGTGTAGACATGTTAATA | + |
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Preference number: 4 (lower is better) Translates to: ECLEMLKNVFSL*KRLPLSVDMLI Trigger: TATTAACATGTCTACACTAAGTGGCAAACGTTTCAAAAGTGAAAACACATTCTTTAGCATTTCCAAGCACTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS GCA 90 bp | ACACTTCTCTGCACCTGGAACCTGGTTTTCACCACATCGAGAGGATaGATCAGGCAAATTTCTACAAGACCTGCAGACCCTCCGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: TLLCTWNLVFTTSRG*IRQISTRPADPPAA Trigger: CGCGGCCGGAGGGTCTGCAGGTCTTGTAGAAATTTGCCTGATGCATCCTCTCGATGTGGTGAAAACCAGGTTCCAGGTGCAGAGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGAACTGGCTGGGGCCCTaGGATCCGACTCTTTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGNWLGP*DPTLCN Trigger: GTTGCAAAGAGTCGGATCCAAGGGCCCCAGCCAGTT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCTTGGATCCGACTCTTaGCAACATCAAAGGGGATGT | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGLGSDS*QHQRGC Trigger: ACATCCCCTTTGATGTTGCAAAGAGTCGGATCCAAG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCAAGTTCCGATTGACTaGCAAGCCAACTTTTACCAC | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGQVPID*QANFYH Trigger: GTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTTG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | AGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTAACTGGCTGGGGCCCTaGGATCCGACTCTTTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: RRYLKHVVICVCVCVCVCNWLGP*DPTLCN Trigger: GTTGCAAAGAGTCGGATCCAAGGGCCCCAGCCAGTT...ACACACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGTTAGGGACCAGGCCTTaGTATAAGGCTAAAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGLGTRP*YKAKIP Trigger: AGGGATTTTAGCCTTATACAAAGGCCTGGTCCCTAA...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | AGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCAATCCTTTGTaGAGGCCCTGGAACCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RRYLKHVVICVCVCVCVCAVNPL*RPWNPK Trigger: CTTGGGGTTCCAGGGCCTCAACAAAGGATTGACAGC...ACACACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGATCATCTCCATTGTTTaGAAGCAGCTTCGGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGIISIV*KQLRYL Trigger: CAAGTACCGAAGCTGCTTCAAAACAATGGAGATGAT...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGCAATGGGTGACTCACTaGTATCAACATCATGATGTG | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGQWVTH*YQHHDV Trigger: CACATCATGATGTTGATACAAGTGAGTCACCCATTG...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | AAAACACTGGAACAGGCTTTGTTCCTGAGCACGTTGTCTTCCCCTCTTAACGGGTTGAACAAGTTCCGATaGACTTGCAAGCCAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: KTLEQALFLSTLSSPLNGLNKFR*TCKPTF Trigger: AAAAGTTGGCTTGCAAGTCAATCGGAACTTGTTCAA...CCCGTTAAGAGGGGAAGACAACGTGCTCAGGAACAAAGCCTGTTCCAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044634.12 ENSMUST00000217690.2 |
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| CDS GCA 90 bp | TGTAAAAGCCAAACAACCCCTCTGTTCGGAAGATCATCTGGAAGCTaGCTCTTACAGTTCTATAACTTTGTGGGTCTGTTACACTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: CKSQTTPLFGRSSGS*LLQFYNFVGLLHFS Trigger: AGAGAAGTGTAACAGACCCACAAAGTTATAGAACTGTAAGAGGCAGCTTCCAGATGATCTTCCGAACAGAGGGGTTGTTTGGCTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS GCA 90 bp | GTTGAGGCCCTGGAACCCCAAGCCTTCCTTCTTAATGATTTGTCTTaGATAAGCAAAAGTAGATGGTTGCTCTTTGAACAAGTTCCGATT | + |
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Preference number: 5 (lower is better) Translates to: VEALEPQAFLLNDLS*ISKSRWLLFEQVPI Trigger: AATCGGAACTTGTTCAAAGAGCAACCATCTACTTTTGCTTATGCAAGACAAATCATTAAGAAGGAAGGCTTGGGGTTCCAGGGCCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CCA 90 bp | TTCTATAACTTTGTGGGTCTGTTACACTTCTCTGCACCTGGAACCTaGTTTTCACCACATCGAGAGGATGCATCAGGCAAATTTCTACAA | + |
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Preference number: 5 (lower is better) Translates to: FYNFVGLLHFSAPGT*FSPHREDASGKFLQ Trigger: TTGTAGAAATTTGCCTGATGCATCCTCTCGATGTGGTGAAAACCAGGTTCCAGGTGCAGAGAAGTGTAACAGACCCACAAAGTTATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS-3UTR CAA 90 bp | GGGAAAGATGTACAGCAGAAGGCTCTGTATGTATATAGCGTATGTCAAAAGCCTCAAGTTCCGATTGACTaGCAAGCCAACTTTTACCAC | + |
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Preference number: 5 (lower is better) Translates to: GKDVQQKALYVYSVCQKPQVPID*QANFYH Trigger: GTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTTG...AGGCTTTTGACATACGCTATATACATACAGAGCCTTCTGCTGTACATCTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CAA 90 bp | AGGCGTTATTTAAAGCATGTTGTGATTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGGACCAGGCCTTaGTATAAGGCTAAAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: RRYLKHVVICVCVCVCVCLGTRP*YKAKIP Trigger: AGGGATTTTAGCCTTATACAAAGGCCTGGTCCCTAA...ACACACACACACACACACACACACACAAATCACAACATGCTTTAAATAACGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS-3UTR CAA 90 bp | GCTACTGGAGAAGCATCATTATATAGTGCATACATAAGAATAAGCTTTGGGTATTTGAACAAGTTCCGATaGACTTGCAAGCCAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: ATGEASLYSAYIRISFGYLNKFR*TCKPTF Trigger: AAAAGTTGGCTTGCAAGTCAATCGGAACTTGTTCAA...ATACCCAAAGCTTATTCTTATGTATGCACTATATAATGATGCTTCTCCAGTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS GCA 72 bp | ATTTCTACAAGACCTGCAGACCCTCCGGCCGCGACCTaGCTGGAGGTCTCGTGCAGTAAGCTGACGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ISTRPADPPAAT*LEVSCSKLTLE Trigger: CTCCAACGTCAGCTTACTGCACGAGACCTCCAGGCAGGTCGCGGCCGGAGGGTCTGCAGGTCTTGTAGAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS GCA 72 bp | ATCGAGAGGATGCATCAGGCAAATTTCTACAAGACCTaGAGACCCTCCGGCCGCGACCTGCCTGGAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: IERMHQANFYKT*RPSGRDLPGGL Trigger: GAGACCTCCAGGCAGGTCGCGGCCGGAGGGTCTGCAGGTCTTGTAGAAATTTGCCTGATGCATCCTCTCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS CCA 72 bp | AAGCAGCTTCGGTACTTGATCTCTCCAGGAACTGGCTaGGGCCCTTGGATCCGACTCTTTGCAACATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KQLRYLISPGTG*GPWIRLFATSK Trigger: CTTTGATGTTGCAAAGAGTCGGATCCAAGGGCCCCAGCCAGTTCCTGGAGAGATCAAGTACCGAAGCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS GCA 72 bp | TGCACCTGGAACCTGGTTTTCACCACATCGAGAGGATaGATCAGGCAAATTTCTACAAGACCTGCAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: CTWNLVFTTSRG*IRQISTRPADP Trigger: AGGGTCTGCAGGTCTTGTAGAAATTTGCCTGATGCATCCTCTCGATGTGGTGAAAACCAGGTTCCAGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044634.12 |
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| CDS TCA 72 bp | CGACAGCTTCTGTTAGTCCCGATCCTAAGCCAGCGATaGGAAATGTCAGCCCTGGTGATAGTGACATATATC | + |
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Preference number: 6 (lower is better) Translates to: RQLLLVPILSQR*EMSALVIVTYI Trigger: GATATATGTCACTATCACCAGGGCTGACATTTCTCATCGCTGGCTTAGGATCGGGACTAACAGAAGCTGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CCA 72 bp | CGTCCCAGAGTTGCTGTCAATCCTTTGTTGAGGCCCTaGAACCCCAAGCCTTCCTTCTTAATGATTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RPRVAVNPLLRP*NPKPSFLMICL Trigger: AAGACAAATCATTAAGAAGGAAGGCTTGGGGTTCCAGGGCCTCAACAAAGGATTGACAGCAACTCTGGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS GCA 72 bp | ATAAACCATGTTGAAAATTCCGTGACGTCCCAGAGTTaGTGTCAATCCTTTGTTGAGGCCCTGGAACCCCAA | + |
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Preference number: 6 (lower is better) Translates to: INHVENSVTSQS*CQSFVEALEPQ Trigger: TTGGGGTTCCAGGGCCTCAACAAAGGATTGACAGCAACTCTGGGACGTCACGGAATTTTCAACATGGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 72 bp | GCAAAAGTAGATGGTTGCTCTTTGAACAAGTTCCGATaGACTTGCAAGCCAACTTTTACCACCTCGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: AKVDGCSLNKFR*TCKPTFTTSKG Trigger: CCCTTTCGAGGTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTTGTTCAAAGAGCAACCATCTACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 72 bp | GAGGCCCTGGAACCCCAAGCCTTCCTTCTTAATGATTaGTCTTGCATAAGCAAAAGTAGATGGTTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EALEPQAFLLND*SCISKSRWLLF Trigger: AAAGAGCAACCATCTACTTTTGCTTATGCAAGACAAATCATTAAGAAGGAAGGCTTGGGGTTCCAGGGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 90 bp | ATAAGCAAAAGTAGATGGTTGCTCTTTGAACAAGTTCCGATTGACTaGCAAGCCAACTTTTACCACCTCGAAAGGGTTAACCACGACAGC | + |
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Preference number: 6 (lower is better) Translates to: ISKSRWLLFEQVPID*QANFYHLERVNHDS Trigger: GCTGTCGTGGTTAACCCTTTCGAGGTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTTGTTCAAAGAGCAACCATCTACTTTTGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 72 bp | AGTAGATGGTTGCTCTTTGAACAAGTTCCGATTGACTaGCAAGCCAACTTTTACCACCTCGAAAGGGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: SRWLLFEQVPID*QANFYHLERVN Trigger: GTTAACCCTTTCGAGGTGGTAAAAGTTGGCTTGCAAGTCAATCGGAACTTGTTCAAAGAGCAACCATCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 90 bp | TCCTTTGTTGAGGCCCTGGAACCCCAAGCCTTCCTTCTTAATGATTaGTCTTGCATAAGCAAAAGTAGATGGTTGCTCTTTGAACAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SFVEALEPQAFLLND*SCISKSRWLLFEQV Trigger: AACTTGTTCAAAGAGCAACCATCTACTTTTGCTTATGCAAGACAAATCATTAAGAAGGAAGGCTTGGGGTTCCAGGGCCTCAACAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS GCA 72 bp | CTGGAACCCCAAGCCTTCCTTCTTAATGATTTGTCTTaGATAAGCAAAAGTAGATGGTTGCTCTTTGAACAA | + |
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Preference number: 6 (lower is better) Translates to: LEPQAFLLNDLS*ISKSRWLLFEQ Trigger: TTGTTCAAAGAGCAACCATCTACTTTTGCTTATGCAAGACAAATCATTAAGAAGGAAGGCTTGGGGTTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 72 bp | AGCCCTGGTGATAGTGACATATATCCCAGAAATTTCTaGTACAGCTCAAAGGTAGAAAACTTGACTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPGDSDIYPRNF*YSSKVENLTAL Trigger: AAGAGCAGTCAAGTTTTCTACCTTTGAGCTGTACAAGAAATTTCTGGGATATATGTCACTATCACCAGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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| CDS CAA 72 bp | CTTAATGATTTGTCTTGCATAAGCAAAAGTAGATGGTaGCTCTTTGAACAAGTTCCGATTGACTTGCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LNDLSCISKSRW*LFEQVPIDLQA Trigger: GGCTTGCAAGTCAATCGGAACTTGTTCAAAGAGCAACCATCTACTTTTGCTTATGCAAGACAAATCATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044634.12 ENSMUST00000110680.3 ENSMUST00000217690.2 |
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