Pregenerated sensors for SLC25A20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032602Ensembl transcript IDs: ENSMUST00000035222.6
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGTCCATTGGATAGACAGATGTGTGCTTCACACCCACATCCCATaGACAGCCAGGAGTATATGGATGGCACCAGAGACATCTCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: PVHWIDRCVLHTHIP*TARSIWMAPETSLE Trigger: CTCAAGAGATGTCTCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCAATGGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR-3UTR GCA 90 bp | TGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATATGGATGGCACCAGATCCTCCTCCTGCCCCTaGCTCTCAGCAACAGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: CASHPHPMHSQEYMDGTRSSSCP*LSATVS Trigger: GGACACTGTTGCTGAGAGGCAGGGGCAGGAGGAGGA...TCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAGTATATGGATGGCACCAGAGACATCTCTTGAGTTTTCCTGGCTAGCACATCACAGCCAAGCCTaGAGCTCTGATCACACCTCT | + |
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Preference number: 2 (lower is better) Translates to: ARSIWMAPETSLEFSWLAHHSQA*SSDHTS Trigger: AGAGGTGTGATCAGAGCTCCAGGCTTGGCTGTGATG...TGCTAGCCAGGAAAACTCAAGAGATGTCTCTGGTGCCATCCATATACTCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR CAA 90 bp | ATGGTTAGTAGGTGGGCTGTTCTTAGGTATTATCTACCCAGTCCATaGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: MVSRWAVLRYYLPSP*DRQMCASHPHPMHS Trigger: GCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCAATGGACTGGGTAGATAATACCTAAGAACAGCCCACCTACTAACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR-3UTR TCA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATAACCAGAGACATCTCTTaGGTTTTCCTGGCTAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: WIDRCVLHTHIPCTARSITRDIS*VFLASN Trigger: ATTGCTAGCCAGGAAAACTCAAGAGATGTCTCTGGT...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR-3UTR CCA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATATCTCTTGAGTTTTCCTaGCTAGCAATTAAAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: WIDRCVLHTHIPCTARSISLEFS*LAIKDP Trigger: GGGATCTTTAATTGCTAGCCAGGAAAACTCAAGAGA...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR-3UTR GCA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCAGGACTTCCTCCTCCTaGCCCTGCCTCTCAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: QFGQRYRVYKLFIPSPILRTSSS*PCLSAT Trigger: TGTTGCTGAGAGGCAGGGGCAGGAGGAGGAAGTCCT...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAGTATATGGATGGCACCAGAGACATCTCTTGAGTTTTCCTGGCTAGCACCATCTCCAATTCTCTaGAAATCCTCTAAATTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ARSIWMAPETSLEFSWLAPSPIL*KSSKFK Trigger: CTTGAATTTAGAGGATTTCCAGAGAATTGGAGATGG...TGCTAGCCAGGAAAACTCAAGAGATGTCTCTGGTGCCATCCATATACTCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR GCA 72 bp | CTCTTCCCTCCCCTCCCTCTCAGGACTTCCTCCTCCTaGCCCTGCCTCTCAGCAACAGTGTCCAGCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: LFPPLPLRTSSS*PCLSATVSSIH Trigger: GTGGATGCTGGACACTGTTGCTGAGAGGCAGGGGCAGGAGGAGGAAGTCCTGAGAGGGAGGGGAGGGAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR CCA 72 bp | TGGCTAGCAATTAAAGATCCCAGCTCCTGGTTTAGCTaGCTGAAAGTAGGCAAGGGGCCTCCAGAGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: WLAIKDPSSWFS*LKVGKGPPESQ Trigger: CTGACTCTCTGGAGGCCCCTTGCCTACTTTCAGCCAGCTAAACCAGGAGCTGGGATCTTTAATTGCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR GCA 72 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATaGACAGCCAGGAGTATATGGATGGCACCAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: WIDRCVLHTHIP*TARSIWMAPET Trigger: TGTCTCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR CCA 72 bp | GAGTTTTCCTGGCTAGCAATTAAAGATCCCAGCTCCTaGTTTAGCTGGCTGAAAGTAGGCAAGGGGCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: EFSWLAIKDPSS*FSWLKVGKGPP Trigger: TGGAGGCCCCTTGCCTACTTTCAGCCAGCTAAACCAGGAGCTGGGATCTTTAATTGCTAGCCAGGAAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR CCA 72 bp | CTTCACACCCACATCCCATGCACAGCCAGGAGTATATaGATGGCACCAGAGACATCTCTTGAGTTTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LHTHIPCTARSI*MAPETSLEFSW Trigger: CCAGGAAAACTCAAGAGATGTCTCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | TGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATATGGATGGCACCAGATCTGCAGTCGGACCTTaGCCGTGTCCAGGGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CASHPHPMHSQEYMDGTRSAVGP*PCPGGA Trigger: GGCACCCCCTGGACACGGTCAAGGTCCGACTGCAGA...TCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR GCA 90 bp | AGGCAACAGTTTCACCATCACAGCCAAGCCTGGAGCTCTGATCACACCTCTTCCCAAACACCAGGCACATaGCGCCGAAGCCGCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RQQFHHHSQAWSSDHTSSQTPGT*RRSRQP Trigger: TGGCTGGCGGCTTCGGCGGCATGTGCCTGGTGTTTG...GGAAGAGGTGTGATCAGAGCTCCAGGCTTGGCTGTGATGGTGAAACTGTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CCA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATAGGAAACAGGCAGCGTTaGCTGGGAAGGCGCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: WIDRCVLHTHIPCTARSIGNRQR*LGRRGS Trigger: TGATCCGCGCCTTCCCAGCCAACGCTGCCTGTTTCC...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | TGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATATGGATGGCACCAGATCTGCAGTAAGCATTTaGTCCGTTCTCCAGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: CASHPHPMHSQEYMDGTRSAVSI*SVLQGS Trigger: TGACCCCTGGAGAACGGATCAAATGCTTACTGCAGA...TCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATAGTACTTGTTCTCCCCTaGAGAAGCCTGAATCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WIDRCVLHTHIPCTARSIVLVLP*RSLNLQ Trigger: CTGCAGATTCAGGCTTCTTCAGGGGAGAACAAGTAC...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR GCA 90 bp | AGGCAACAGTTTCACCATCACAGCCAAGCCTGGAGCTCTGATCACACCTCTTCCTCCTCTGGAGATTTCTaGTGTAGTTTCTTCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RQQFHHHSQAWSSDHTSSSSGDF*CSFFPR Trigger: TCTGGGGAAGAAACTACAGCAGAAATCTCCAGAGGA...GGAAGAGGTGTGATCAGAGCTCCAGGCTTGGCTGTGATGGTGAAACTGTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR GCA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATAGGCGCGGATCATGACTaGATTGAACCCTTTGTACAA | + |
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Preference number: 4 (lower is better) Translates to: WIDRCVLHTHIPCTARSIGADHD*IEPFVQ Trigger: TTGTACAAAGGGTTCAATGCAGTCATGATCCGCGCC...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| 3UTR CAA 72 bp | AGGTGGGCTGTTCTTAGGTATTATCTACCCAGTCCATaGGATAGACAGATGTGTGCTTCACACCCACATCCC | + |
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Preference number: 4 (lower is better) Translates to: RWAVLRYYLPSP*DRQMCASHPHP Trigger: GGGATGTGGGTGTGAAGCACACATCTGTCTATCCAATGGACTGGGTAGATAATACCTAAGAACAGCCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATAGCCATTCATATGTCATaGAATACATCCCACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WIDRCVLHTHIPCTARSIAIHMS*NTSHWQ Trigger: CTGCCAGTGGGATGTATTTCATGACATATGAATGGC...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CCA 90 bp | TGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATATGGATGGCACCAGAGACACTCTTTCCCTCTaGAGTGAAGAGATTTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: CASHPHPMHSQEYMDGTRDTLSL*SEEIFK Trigger: CTTAAAAATCTCTTCACTCCAGAGGGAAAGAGTGTC...TCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCCGGATCCCGAACTCCTaGTACAGCTTCTTTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: QFGQRYRVYKLFIPSPILRIPNS*YSFFAQ Trigger: CTGCGCAAAGAAGCTGTATCAGGAGTTCGGGATCCG...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR GCA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCCTTGGTGGTTGTGTCTaGAGTCGGACCTTGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: QFGQRYRVYKLFIPSPILLGGCV*SRTLTV Trigger: CACGGTCAAGGTCCGACTGCAGACACAACCACCAAG...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CCA 90 bp | AATATTTATTGTTTCCTGTTAAAACTGAGTGCTCTCATGGGGAAAGAATGTGCACCAGGAGGTGCAGTCTaGAATCGAGACTTGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: NIYCFLLKLSALMGKECAPGGAV*NRDLST Trigger: CGTGCTCAAGTCTCGATTCCAGACTGCACCTCCTGG...TGCACATTCTTTCCCCATGAGAGCACTCAGTTTTAACAGGAAACAATAAATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCTCCCCTGAAGAAGCCTaGATCTGCAGTAAGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: QFGQRYRVYKLFIPSPILSPEEA*ICSKHL Trigger: CAAATGCTTACTGCAGATTCAGGCTTCTTCAGGGGA...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR TCA 90 bp | AATATTTATTGTTTCCTGTTAAAACTGAGTGCTCTCATGGGGAAAGAATGTGCACTTTGTACAAGGAGGTaGCTCCTTCTTCTCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: NIYCFLLKLSALMGKECALCTRR*LLLLGS Trigger: TGATCCGAGAAGAAGGAGTCACCTCCTTGTACAAAG...TGCACATTCTTTCCCCATGAGAGCACTCAGTTTTAACAGGAAACAATAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGTATATGGATGGCACCAGAGACATCTCTTGAGTTTTCCTGGCTAGCAGTCTGCAGTCGGACCTaGACCGTGTCCAGGGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ARSIWMAPETSLEFSWLAVCSRT*TVSRGC Trigger: GCACCCCCTGGACACGGTCAAGGTCCGACTGCAGAC...TGCTAGCCAGGAAAACTCAAGAGATGTCTCTGGTGCCATCCATATACTCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CAA 90 bp | TGGATAGACAGATGTGTGCTTCACACCCACATCCCATGCACAGCCAGGAGTATAATCTGCAGTAAGCATTaGATCCGTTCTCCAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: WIDRCVLHTHIPCTARSIICSKH*IRSPGV Trigger: GACCCCTGGAGAACGGATCAAATGCTTACTGCAGAT...TATACTCCTGGCTGTGCATGGGATGTGGGTGTGAAGCACACATCTGTCTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CAA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCAGGAAACAGGCAGCGTaGGCTGGGAAGGCGCGGATC | + |
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Preference number: 5 (lower is better) Translates to: QFGQRYRVYKLFIPSPILRKQAA*AGKARI Trigger: GATCCGCGCCTTCCCAGCCAACGCTGCCTGTTTCCT...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CAA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCACTGCATTGAACCCTTaGTACAAGGAGGTGACTCCT | + |
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Preference number: 5 (lower is better) Translates to: QFGQRYRVYKLFIPSPILTALNP*YKEVTP Trigger: AGGAGTCACCTCCTTGTACAAAGGGTTCAATGCAGT...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS-3UTR CAA 90 bp | CAATTTGGCCAAAGGTATCGAGTCTATAAACTATTTATTCCATCTCCAATTCTCCGGATCATGACTGCATaGAACCCTTTGTACAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QFGQRYRVYKLFIPSPILRIMTA*NPLYKE Trigger: CTCCTTGTACAAAGGGTTCAATGCAGTCATGATCCG...GAGAATTGGAGATGGAATAAATAGTTTATAGACTCGATACCTTTGGCCAAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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| CDS CCA 72 bp | CCGAGGCACGCTGAGGTCACTGACACTCTTTCCCTCTaGAGTGAAGAGATTTTTAAGCCATTCATATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PRHAEVTDTLSL*SEEIFKPFICH Trigger: ATGACATATGAATGGCTTAAAAATCTCTTCACTCCAGAGGGAAAGAGTGTCAGTGACCTCAGCGTGCCTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035222.6 |
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