Pregenerated sensors for SLC25A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050304Ensembl transcript IDs: ENSMUST00000058635.5
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCCTTGATAATTGAGATTAAGTACATAGAGTCTTGGGTTCACCCTGTAGATCCCTCTCTCCACAAGGTATaGGATTTGAGGAAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: ALIIEIKYIESWVHPVDPSLHKV*DLRKGR Trigger: TCTTCCCTTCCTCAAATCTCATACCTTGTGGAGAGA...GGGATCTACAGGGTGAACCCAAGACTCTATGTACTTAATCTCAATTATCAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGATCTCTCCACAAGGTATGAGATTTGAGGAAGGGAAGACAAACCCGAAAGTCCTCTCATTCATGTaGTCAGACAAGGACTCATCA | + |
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Preference number: 2 (lower is better) Translates to: IKISPQGMRFEEGKTNPKVLSFM*SDKDSS Trigger: TGATGAGTCCTTGTCTGAGCACATGAATGAGAGGAC...TTTCGGGTTTGTCTTCCCTTCCTCAAATCTCATACCTTGTGGAGAGATCTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR GCA 90 bp | AAGATCTCTCCACAAGGTATGAGATTTGAGGAAGGGAAGACAAACCCGAAATTCAGCCAGCGCAGCAAATaGAGAAGCCAGCGACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KISPQGMRFEEGKTNPKFSQRSK*RSQRPS Trigger: GCTGGGTCGCTGGCTTCTGCATTTGCTGCGCTGGCT...GAATTTCGGGTTTGTCTTCCCTTCCTCAAATCTCATACCTTGTGGAGAGATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | CCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTGAACTCTTTGACATGTACTTCACAAGCTCAGTaGGGCAGAGAGCCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PKFPVKANSMLVLNSLTCTSQAQ*GREPAQ Trigger: CTGCGCTGGCTCTCTGCCCCACTGAGCTTGTGAAGT...ACATGTCAAAGAGTTCAAGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR GCA 90 bp | AGGAAGGGAAGACAAACCCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTTCAGCTCTGCATTCTaGTCCACTCTAGCCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: RKGRQTRNSQSKLTPCWSFSSAF*STLATF Trigger: GAAAGTGGCTAGAGTGGAGCAGAATGCAGAGCTGAA...AGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGGGTTTGTCTTCCCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR TCA 90 bp | GATATAAAGATCTCTCCACAAGGTATGAGATTTGAGGAAGGGAAGACAAACCCGAAAAGCCAAAGCACATaGACAGGACAGAACCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DIKISPQGMRFEEGKTNPKSQST*TGQNPG Trigger: CCCAGGGTTCTGTCCTGTTCATGTGCTTTGGCTTTT...CGGGTTTGTCTTCCCTTCCTCAAATCTCATACCTTGTGGAGAGATCTTTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGAAGACAAACCCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTCTTCATCTCATACATaGTCTGCAGCCGACACTTCA | + |
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Preference number: 4 (lower is better) Translates to: RKGRQTRNSQSKLTPCWSSSSHT*SAADTS Trigger: TGAAGTGTCGGCTGCAGACCATGTATGAGATGAAGA...AGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGGGTTTGTCTTCCCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| 3UTR CAA 72 bp | CCAGTCAAAGCTAACTCCATGTTGGTCTTGAACTCTTaGACATGTAGAGCTGTGGTCCTCTCATTCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVKANSMLVLNS*TCRAVVLSFMC Trigger: GCACATGAATGAGAGGACCACAGCTCTACATGTCAAAGAGTTCAAGACCAACATGGAGTTAGCTTTGACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| 3UTR CAA 72 bp | CCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTaGAACTCTTTGACATGTAGAGCTGTGGTCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PKFPVKANSMLV*NSLTCRAVVLS Trigger: TGAGAGGACCACAGCTCTACATGTCAAAGAGTTCAAGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR TCA 90 bp | AGGAAGGGAAGACAAACCCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTCCAGAATACAAGGCTaGTATCCCTTCATTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RKGRQTRNSQSKLTPCWSSRIQG*YPFISH Trigger: GTGAGAAATGAAGGGATATCAGCCTTGTATTCTGGA...AGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGGGTTTGTCTTCCCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | GATATAAAGATCTCTCCACAAGGTATGAGATTTGAGGAAGGGAAGACAAACCCGCCACGGATGCCCACTTaGTTGTATGTTTTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DIKISPQGMRFEEGKTNPPRMPT*LYVFRK Trigger: CTTCCTGAAAACATACAACCAAGTGGGCATCCGTGG...CGGGTTTGTCTTCCCTTCCTCAAATCTCATACCTTGTGGAGAGATCTTTATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGAAGACAAACCCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTTCCTGACAAACTGTTaGCAAAAGCCAAAGCACATG | + |
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Preference number: 4 (lower is better) Translates to: RKGRQTRNSQSKLTPCWSFLTNC*QKPKHM Trigger: CATGTGCTTTGGCTTTTGCCAACAGTTTGTCAGGAA...AGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGGGTTTGTCTTCCCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | CCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTGAACTCTTTGACATGTTTTCCTGAGCAAGAGTaGTCGAGAGTCCACGATAGA | + |
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Preference number: 4 (lower is better) Translates to: PKFPVKANSMLVLNSLTCFPEQE*SRVHDR Trigger: TCTATCGTGGACTCTCGACCACTCTTGCTCAGGAAA...ACATGTCAAAGAGTTCAAGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| 3UTR CAA 72 bp | ACAAACCCGAAATTCCCAGTCAAAGCTAACTCCATGTaGGTCTTGAACTCTTTGACATGTAGAGCTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TNPKFPVKANSM*VLNSLTCRAVV Trigger: GACCACAGCTCTACATGTCAAAGAGTTCAAGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGGGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | CCGAAATTCCCAGTCAAAGCTAACTCCATGTTGGTCTTGAACTCTTTGACATGTAAAAGAGAGCAGCATTaGAAGGGATGGCTCGAATCA | + |
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Preference number: 4 (lower is better) Translates to: PKFPVKANSMLVLNSLTCKREQH*KGWLES Trigger: TGATTCGAGCCATCCCTTCCAATGCTGCTCTCTTTT...ACATGTCAAAGAGTTCAAGACCAACATGGAGTTAGCTTTGACTGGGAATTTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CCA 90 bp | TTGATAATTGAGATTAAGTACATAGAGTCTTGGGTTCACCCTGTAGATCCCACCTGGCTCGAATCAGAGTaGCTTTCAATCCAGAATACA | + |
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Preference number: 4 (lower is better) Translates to: LIIEIKYIESWVHPVDPTWLESE*LSIQNT Trigger: TGTATTCTGGATTGAAAGCCACTCTGATTCGAGCCA...GGTGGGATCTACAGGGTGAACCCAAGACTCTATGTACTTAATCTCAATTATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS GCA 90 bp | CATAGGCTAGCAGTGCAGGACTGGTTCCCCTGTAAAGGCCACGGATaGCCACTTGGTTGTATGTTTTCAGGAAGCAGTCGGCAAGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: HRLAVQDWFPCKGHG*PLGCMFSGSSRQGL Trigger: AAGGCCTTGCCGACTGCTTCCTGAAAACATACAACCAAGTGGGCATCCGTGGCCTTTACAGGGGAACCAGTCCTGCACTGCTAGCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS GCA 90 bp | AGAAGCCAGCGACCCAGCAGTAGCAGTCTCCAAGTCGTTCAGCTCTaGATTCTGCTCCACTCTAGCCACTTTCCTGACAAACTGTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RSQRPSSSSLQVVQL*ILLHSSHFPDKLLA Trigger: TGCCAACAGTTTGTCAGGAAAGTGGCTAGAGTGGAGCAGAATGCAGAGCTGAACGACTTGGAGACTGCTACTGCTGGGTCGCTGGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS CCA 90 bp | AAACCAAAAAGAGAGCAGCATTGGAAGGGATGGCTCGAATCAGAGTaGCTTTCAATCCAGAATACAAGGCTGATATCCCTTCATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KPKREQHWKGWLESE*LSIQNTRLISLHFS Trigger: TGAGAAATGAAGGGATATCAGCCTTGTATTCTGGATTGAAAGCCACTCTGATTCGAGCCATCCCTTCCAATGCTGCTCTCTTTTTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS CCA 90 bp | TCATCATCTTTCTGCTGTACTCATAAACCAAAAAGAGAGCAGCATTaGAAGGGATGGCTCGAATCAGAGTGGCTTTCAATCCAGAATACA | + |
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Preference number: 5 (lower is better) Translates to: SSSFCCTHKPKREQH*KGWLESEWLSIQNT Trigger: TGTATTCTGGATTGAAAGCCACTCTGATTCGAGCCATCCCTTCCAATGCTGCTCTCTTTTTGGTTTATGAGTACAGCAGAAAGATGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS-3UTR CAA 90 bp | AAGATCTCTCCACAAGGTATGAGATTTGAGGAAGGGAAGACAAACCCGAAATTCTTTCCTGACAAACTGTaGGCAAAAGCCAAAGCACAT | + |
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Preference number: 5 (lower is better) Translates to: KISPQGMRFEEGKTNPKFFPDKL*AKAKAH Trigger: ATGTGCTTTGGCTTTTGCCAACAGTTTGTCAGGAAA...GAATTTCGGGTTTGTCTTCCCTTCCTCAAATCTCATACCTTGTGGAGAGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS GCA 72 bp | GCAGTGCAGGACTGGTTCCCCTGTAAAGGCCACGGATaGCCACTTGGTTGTATGTTTTCAGGAAGCAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: AVQDWFPCKGHG*PLGCMFSGSSR Trigger: CCGACTGCTTCCTGAAAACATACAACCAAGTGGGCATCCGTGGCCTTTACAGGGGAACCAGTCCTGCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS CAA 72 bp | AGGACTGGTTCCCCTGTAAAGGCCACGGATGCCCACTaGGTTGTATGTTTTCAGGAAGCAGTCGGCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTGSPVKATDAH*VVCFQEAVGKA Trigger: GGCCTTGCCGACTGCTTCCTGAAAACATACAACCAAGTGGGCATCCGTGGCCTTTACAGGGGAACCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS GCA 72 bp | CGACCCAGCAGTAGCAGTCTCCAAGTCGTTCAGCTCTaGATTCTGCTCCACTCTAGCCACTTTCCTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: RPSSSSLQVVQL*ILLHSSHFPDK Trigger: TTTGTCAGGAAAGTGGCTAGAGTGGAGCAGAATGCAGAGCTGAACGACTTGGAGACTGCTACTGCTGGGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS CCA 72 bp | TTCTGCTGTACTCATAAACCAAAAAGAGAGCAGCATTaGAAGGGATGGCTCGAATCAGAGTGGCTTTCAATC | + |
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Preference number: 6 (lower is better) Translates to: FCCTHKPKREQH*KGWLESEWLSI Trigger: GATTGAAAGCCACTCTGATTCGAGCCATCCCTTCCAATGCTGCTCTCTTTTTGGTTTATGAGTACAGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS CCA 72 bp | ACTCATAAACCAAAAAGAGAGCAGCATTGGAAGGGATaGCTCGAATCAGAGTGGCTTTCAATCCAGAATACA | + |
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Preference number: 6 (lower is better) Translates to: THKPKREQHWKG*LESEWLSIQNT Trigger: TGTATTCTGGATTGAAAGCCACTCTGATTCGAGCCATCCCTTCCAATGCTGCTCTCTTTTTGGTTTATGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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| CDS TCA 72 bp | TCGAATCAGAGTGGCTTTCAATCCAGAATACAAGGCTaGTATCCCTTCATTTCTCACAACACTTATAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SNQSGFQSRIQG*YPFISHNTYKG Trigger: ACCTTTATAAGTGTTGTGAGAAATGAAGGGATATCAGCCTTGTATTCTGGATTGAAAGCCACTCTGATTCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058635.5 |
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