Pregenerated sensors for SLC25A19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020744Ensembl transcript IDs: ENSMUST00000021089.11, ENSMUST00000106503.10, ENSMUST00000135552.2, ENSMUST00000178003.8
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTGCAGCATGCGTGCAGAGCTGGTGATGGCCCCTGCACTCCAGTaGGAGGGGAAGGAGAGGAGCCACTCCTGTCTGCCCTTCACCGCC | + |
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Preference number: 1 (lower is better) Translates to: VCSMRAELVMAPALQ*EGKERSHSCLPFTA Trigger: GGCGGTGAAGGGCAGACAGGAGTGGCTCCTCTCCTTCCCCTCCCACTGGAGTGCAGGGGCCATCACCAGCTCTGCACGCATGCTGCACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR TCA 90 bp | CCCACCACACCTCACCAGGCTGTCGGACATCCCATGCCCTGGGCCTaGGGCCCATCTGGGATTAGAGGACATGGTGTGCAGCATGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: PTTPHQAVGHPMPWA*GPSGIRGHGVQHAC Trigger: GCACGCATGCTGCACACCATGTCCTCTAATCCCAGATGGGCCTCAGGCCCAGGGCATGGGATGTCCGACAGCCTGGTGAGGTGTGGTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR GCA 90 bp | AGAGGACATGGTGTGCAGCATGCGTGCAGAGCTGGTGATGGCCCCTaGACTCCAGTGGGAGGGGAAGGAGAGGAGCCACTCCTGTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: RGHGVQHACRAGDGP*TPVGGEGEEPLLSA Trigger: GGCAGACAGGAGTGGCTCCTCTCCTTCCCCTCCCACTGGAGTGCAGGGGCCATCACCAGCTCTGCACGCATGCTGCACACCATGTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR GCA 90 bp | TGCCTACAGCGCCCACCACACCTCACCAGGCTGTCGGACATCCCATaGCCTGGGCCTGAGGCCCATCTGGGATTAGAGGACATGGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: CLQRPPHLTRLSDIP*PGPEAHLGLEDMVC Trigger: GCACACCATGTCCTCTAATCCCAGATGGGCCTCAGGCCCAGGGCATGGGATGTCCGACAGCCTGGTGAGGTGTGGTGGGCGCTGTAGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR TCA 90 bp | GCCACTCCTGTCTGCCCTTCACCGCCTCTGTCTCAGTTTCCTCCCTaGCCTGTTGTGGAGCCTCACAGGCACAAAGGCTTGGGCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ATPVCPSPPLSQFPP*PVVEPHRHKGLGLG Trigger: TCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAGGTCAGGGAGGAAACTGAGACAGAGGCGGTGAAGGGCAGACAGGAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 90 bp | CTCCCTGACCTGTTGTGGAGCCTCACAGGCACAAAGGCTTGGGCCTaGGAGTTCAGAAGCTACCCACATGACAGGGTTCTCCCCCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: LPDLLWSLTGTKAWA*EFRSYPHDRVLPLS Trigger: GCTTAGGGGGAGAACCCTGTCATGTGGGTAGCTTCTGAACTCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAGGTCAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 90 bp | GTGATTCTTCTCGTGAACAGGAAGCTCCCTCTTCATCTGCATCCCTaGCTCTGCCTACAGCGCCCACCACACCTCACCAGGCTGTCGGAC | + |
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Preference number: 1 (lower is better) Translates to: VILLVNRKLPLHLHP*LCLQRPPHLTRLSD Trigger: GTCCGACAGCCTGGTGAGGTGTGGTGGGCGCTGTAGGCAGAGCCAGGGATGCAGATGAAGAGGGAGCTTCCTGTTCACGAGAAGAATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR TCA 90 bp | CACAGGCACAAAGGCTTGGGCCTGGGAGTTCAGAAGCTACCCACATaGCAGGGTTCTCCCCCTAAGCTGACAAGCATGGCTACCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: HRHKGLGLGVQKLPT*QGSPPKLTSMATSG Trigger: CCCTGAGGTAGCCATGCTTGTCAGCTTAGGGGGAGAACCCTGTCATGTGGGTAGCTTCTGAACTCCCAGGCCCAAGCCTTTGTGCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 90 bp | AGTTTCCTCCCTGACCTGTTGTGGAGCCTCACAGGCACAAAGGCTTaGGCCTGGGAGTTCAGAAGCTACCCACATGACAGGGTTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SFLPDLLWSLTGTKA*AWEFRSYPHDRVLP Trigger: GGGGAGAACCCTGTCATGTGGGTAGCTTCTGAACTCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAGGTCAGGGAGGAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 90 bp | TTTCACGATCAGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATaGCAGGGGCTGGAATCCCACAAAGTCAAGAAGTCTCTCCTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: FHDQGHSQQALQSKL*QGLESHKVKKSLLP Trigger: AGGGAGGAGAGACTTCTTGACTTTGTGGGATTCCAGCCCCTGCCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCTGATCGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 90 bp | AGGCCCCTCCTGCCTCACAACTATCTGTCTTCCCTCCTTATGCAGTaGAAGAGGTTACAGAAGAGCTCGTACCAGAAGAACATGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RPLLPHNYLSSLLMQ*KRLQKSSYQKNMKP Trigger: TGGCTTCATGTTCTTCTGGTACGAGCTCTTCTGTAACCTCTTCCACTGCATAAGGAGGGAAGACAGATAGTTGTGAGGCAGGAGGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
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| 3UTR CCA 90 bp | AGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATGGCAGGGGCTaGAATCCCACAAAGTCAAGAAGTCTCTCCTCCCTTCCTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: RAIPSRHYNPSYGRG*NPTKSRSLSSLPSL Trigger: TAAAGAAGGAAGGGAGGAGAGACTTCTTGACTTTGTGGGATTCCAGCCCCTGCCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCTCTGCCTACAGCGCCCACCACACCTCACCAGGCTGTCGGACATCCCATGCGTGCAGAGCTGGTaGTGGCCCCTGCACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PWLCLQRPPHLTRLSDIPCVQSW*WPLHSS Trigger: ACTGGAGTGCAGGGGCCATCACCAGCTCTGCACGCA...TGGGATGTCCGACAGCCTGGTGAGGTGTGGTGGGCGCTGTAGGCAGAGCCAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCATGGCTACCTCAGGGCTGCAAGCCAGAAAGGCCCCTCCCCCATCATCCTCCCGGCAGCTGGCCTaGAAGGCCAACCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TSMATSGLQARKAPPPSSSRQLA*KANQAA Trigger: TGCTGCCTGGTTGGCCTTCCAGGCCAGCTGCCGGGA...GGATGATGGGGGAGGGGCCTTTCTGGCTTGCAGCCCTGAGGTAGCCATGCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTCCCCCTAAGCTGACAAGCATGGCTACCTCAGGGCTGCAAGCCAGAAAGTCCCGGCAGCTGGCCTaGAAGGCCAACCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSPPKLTSMATSGLQARKSRQLA*KANQAA Trigger: TGCTGCCTGGTTGGCCTTCCAGGCCAGCTGCCGGGA...CTTTCTGGCTTGCAGCCCTGAGGTAGCCATGCTTGTCAGCTTAGGGGGAGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGCCCTCCCTTCATCTGCATCCCTaGCTCTGCCTACAGCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FCCSKPRKPTGHPSQKPSLHLHP*LCLQRP Trigger: TGGGCGCTGTAGGCAGAGCCAGGGATGCAGATGAAG...GGAGGGCTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | AAACACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGGCTGGTGATGGCCCCTaGACTCCAGTGGGAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: KHFCCSKPRKPTGHPSQKAGDGP*TPVGGE Trigger: TTCCCCTCCCACTGGAGTGCAGGGGCCATCACCAGC...CTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCTCTGCCTACAGCGCCCACCACACCTCACCAGGCTGTCGGACATCCCAAGCCATTGTTCAGTATaGGCTCAGAGCCAAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PWLCLQRPPHLTRLSDIPSHCSV*AQSQVL Trigger: CAAGACTTGGCTCTGAGCTCATACTGAACAATGGCT...TGGGATGTCCGACAGCCTGGTGAGGTGTGGTGGGCGCTGTAGGCAGAGCCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACCTGTTGTGGAGCCTCACAGGCACAAAGGCTTGGGCCTGGGAGTTCAGAATTCAGCGAAGGCCCTTaGGTCCTTCTGCCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LTCCGASQAQRLGPGSSEFSEGP*VLLPSA Trigger: AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAA...TTCTGAACTCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGCCCGCCTTCTTTTTACAGTaGAAGCACCCCCTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HFCCSKPRKPTGHPSQKPAFFLQ*KHPLLS Trigger: AGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGC...GGGCTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGTCCCGGCAGCTGGCCTaGAAGGCCAACCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PRPSFYSASTPFSLPSVQSRQLA*KANQAA Trigger: TGCTGCCTGGTTGGCCTTCCAGGCCAGCTGCCGGGA...CTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGCCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTCATGTGATTCTTCTCGTGAACAGGAAGCTCCCTCTTCATCTGCATCCGCCCCTGCACTCCAGTaGGAGGGGAAGGAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QQSCDSSREQEAPSSSASAPALQ*EGKERS Trigger: GCTCCTCTCCTTCCCCTCCCACTGGAGTGCAGGGGC...GGATGCAGATGAAGAGGGAGCTTCCTGTTCACGAGAAGAATCACATGACTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTCATGTGATTCTTCTCGTGAACAGGAAGCTCCCTCTTCATCTGCATCCGCTGGTGATGGCCCCTaGACTCCAGTGGGAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QQSCDSSREQEAPSSSASAGDGP*TPVGGE Trigger: TTCCCCTCCCACTGGAGTGCAGGGGCCATCACCAGC...GGATGCAGATGAAGAGGGAGCTTCCTGTTCACGAGAAGAATCACATGACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | AAACACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGTTAGAGGACATGGTGTaGAGCATGCGTGCAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KHFCCSKPRKPTGHPSQKLEDMV*SMRAEL Trigger: CAGCTCTGCACGCATGCTGCACACCATGTCCTCTAA...CTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTCCAGCAATAGGGTCACAAAACACTTCTGCTGCTCCAAGCCCAGGAAGCAGGGGAGGGCTACAGTaGACCACAGAGGGGAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: ISPAIGSQNTSAAPSPGSRGGLQ*TTEGRV Trigger: CACTCTCCCCTCTGTGGTCCACTGTAGCCCTCCCCT...GCTTCCTGGGCTTGGAGCAGCAGAAGTGTTTTGTGACCCTATTGCTGGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGAGCCATTGTTCAGTATaGGCTCAGAGCCAAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: QAPPSLFLLFSEGPCVLLSHCSV*AQSQVL Trigger: CAAGACTTGGCTCTGAGCTCATACTGAACAATGGCT...CAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAACCAAGATCAGAAAAGTaGACCACTAGGGGAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: KTLLLLQAQEANGPPISEPRSEK*TTRGGL Trigger: TAGCCCTCCCCTAGTGGTTCACTTTTCTGATCTTGG...TTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGGCCCTTGCGTCCTTCTaGCTTCAGCTCCGGATGACT | + |
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Preference number: 2 (lower is better) Translates to: PSFYSASTPFSLPSVQRRALASF*LQLRMT Trigger: AGTCATCCGGAGCTGAAGGCAGAAGGACGCAAGGGC...CCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGTTCAGCGAAGGCCCTTaGGTCCTTCTGCCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AFFLQCKHPLLSSFCSAKFSEGP*VLLPSA Trigger: AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAA...CTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGTTCAGCGAAGGCCCTTaGGTCCTTCTGCCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSFYSASTPFSLPSVQRRFSEGP*VLLPSA Trigger: AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAA...CCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTTTTCACGATCAGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATGGAGCTCCCTCTTCATCTaGATCCCTGGCTCTGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: PSFHDQGHSQQALQSKLWSSLFI*IPGSAY Trigger: GTAGGCAGAGCCAGGGATGCAGATGAAGAGGGAGCT...CCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCTGATCGTGAAAACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCCAAGATCAGAAAAGTGAACCACTAGGGGAGGGCTACAGTGGACCACAGAGCCATTGTTCAGTATaGGCTCAGAGCCAAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RSQDQKSEPLGEGYSGPQSHCSV*AQSQVL Trigger: CAAGACTTGGCTCTGAGCTCATACTGAACAATGGCT...CTGTGGTCCACTGTAGCCCTCCCCTAGTGGTTCACTTTTCTGATCTTGGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR TCA 72 bp | CCTCACCAGGCTGTCGGACATCCCATGCCCTGGGCCTaGGGCCCATCTGGGATTAGAGGACATGGTGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PHQAVGHPMPWA*GPSGIRGHGVQ Trigger: CTGCACACCATGTCCTCTAATCCCAGATGGGCCTCAGGCCCAGGGCATGGGATGTCCGACAGCCTGGTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR GCA 72 bp | GGGCCTGAGGCCCATCTGGGATTAGAGGACATGGTGTaGAGCATGCGTGCAGAGCTGGTGATGGCCCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GPEAHLGLEDMV*SMRAELVMAPA Trigger: TGCAGGGGCCATCACCAGCTCTGCACGCATGCTGCACACCATGTCCTCTAATCCCAGATGGGCCTCAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGCTGCAAGCCAGAAAGGCCCCTCCCCCATCATCCTCCCTCAGATGGGATACCAGGCAGCAGCCATaGTTCAGTATGAGCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SGLQARKAPPPSSSLRWDTRQQP*FSMSSE Trigger: CTCTGAGCTCATACTGAACAATGGCTGCTGCCTGGT...ATCCCATCTGAGGGAGGATGATGGGGGAGGGGCCTTTCTGGCTTGCAGCCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR TCA 72 bp | AGCCAACGGGCCACCCATCTCAGAAGCCCTCCCAAGTaGCCCTGGGTCTTCAGAATCAGGAGCCAAGATCAG | + |
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Preference number: 3 (lower is better) Translates to: SQRATHLRSPPK*PWVFRIRSQDQ Trigger: CTGATCTTGGCTCCTGATTCTGAAGACCCAGGGTCACTTGGGAGGGCTTCTGAGATGGGTGGCCCGTTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 72 bp | CCTGACCTGTTGTGGAGCCTCACAGGCACAAAGGCTTaGGCCTGGGAGTTCAGAAGCTACCCACATGACAGG | + |
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Preference number: 3 (lower is better) Translates to: PDLLWSLTGTKA*AWEFRSYPHDR Trigger: CCTGTCATGTGGGTAGCTTCTGAACTCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAGGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCACCAGGCAGCAGCCATaGTTCAGTATGAGCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: STPFSLPSVQRRPLRPSATRQQP*FSMSSE Trigger: CTCTGAGCTCATACTGAACAATGGCTGCTGCCTGGT...GGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR GCA 72 bp | CCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTaGGTCCTTCTGCCTTCAGCTCCGGATGACTTCATG | + |
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Preference number: 3 (lower is better) Translates to: PPSLFLLFSEGP*VLLPSAPDDFM Trigger: CATGAAGTCATCCGGAGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR CCA 72 bp | CTGTTGTGGAGCCTCACAGGCACAAAGGCTTGGGCCTaGGAGTTCAGAAGCTACCCACATGACAGGGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LLWSLTGTKAWA*EFRSYPHDRVL Trigger: GAGAACCCTGTCATGTGGGTAGCTTCTGAACTCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGACCAGGCAGCAGCCATaGTTCAGTATGAGCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QAPPSLFLLFSEGPCVLLTRQQP*FSMSSE Trigger: CTCTGAGCTCATACTGAACAATGGCTGCTGCCTGGT...CAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| 3UTR TCA 72 bp | AAAGGCTTGGGCCTGGGAGTTCAGAAGCTACCCACATaGCAGGGTTCTCCCCCTAAGCTGACAAGCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: KGLGLGVQKLPT*QGSPPKLTSMA Trigger: AGCCATGCTTGTCAGCTTAGGGGGAGAACCCTGTCATGTGGGTAGCTTCTGAACTCCCAGGCCCAAGCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR CCA 72 bp | GCCAGAAAGGCCCCTCCCCCATCATCCTCCCTCAGATaGGATGTGTTCCTAAGCTATAGGAGTGACACAAGG | + |
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Preference number: 3 (lower is better) Translates to: ARKAPPPSSSLR*DVFLSYRSDTR Trigger: CCTTGTGTCACTCCTATAGCTTAGGAACACATCCCATCTGAGGGAGGATGATGGGGGAGGGGCCTTTCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGTCATGTGATTCTTCTCGTGAACAGGAAGCTCCCTCTTCATCTGCATCCTTCCTCCCTGACCTGTaGTGGAGCCTCACAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: QQSCDSSREQEAPSSSASFLPDL*WSLTGT Trigger: TGTGCCTGTGAGGCTCCACAACAGGTCAGGGAGGAA...GGATGCAGATGAAGAGGGAGCTTCCTGTTCACGAGAAGAATCACATGACTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| 3UTR TCA 72 bp | CTGGGTCTTCAGAATCAGGAGCCAAGATCAGAAAAGTaGACCACTAGGGGAGGGCTACAGTGGACCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGLQNQEPRSEK*TTRGGLQWTTE Trigger: CTCTGTGGTCCACTGTAGCCCTCCCCTAGTGGTTCACTTTTCTGATCTTGGCTCCTGATTCTGAAGACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| 3UTR GCA 72 bp | CCCTCCTGCCTCACAACTATCTGTCTTCCCTCCTTATaGAGTGGAAGAGGTTACAGAAGAGCTCGTACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSCLTTICLPSL*SGRGYRRARTR Trigger: TCTGGTACGAGCTCTTCTGTAACCTCTTCCACTGCATAAGGAGGGAAGACAGATAGTTGTGAGGCAGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
||
| 3UTR CCA 72 bp | CCCAGCAGGCATTACAATCCAAGTTATGGCAGGGGCTaGAATCCCACAAAGTCAAGAAGTCTCTCCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PSRHYNPSYGRG*NPTKSRSLSSL Trigger: AAGGGAGGAGAGACTTCTTGACTTTGTGGGATTCCAGCCCCTGCCATAACTTGGATTGTAATGCCTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGGCCCCTGCACTCCAGTGGGAGGGGAAGGAGAGGAGCCACTCCTGTCTGTGGGGGACAGGCCCTTaGAGAAGCCCCGGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VMAPALQWEGKERSHSCLWGTGP*RSPGCL Trigger: AAGGCACCCGGGGCTTCTTCAAGGGCCTGTCCCCCA...CAGACAGGAGTGGCTCCTCTCCTTCCCCTCCCACTGGAGTGCAGGGGCCATCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGCCCTCCTGGGGGACAGGCCCTTaGAGAAGCCCCGGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCCSKPRKPTGHPSQKPSWGTGP*RSPGCL Trigger: AAGGCACCCGGGGCTTCTTCAAGGGCCTGTCCCCCA...GGAGGGCTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGCCCGTAGTACCTGCTGGGTaGGGTCCAGGAGGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HFCCSKPRKPTGHPSQKPVVPAG*GPGGPC Trigger: ACAGGGGCCTCCTGGACCTCACCCAGCAGGTACTAC...GGGCTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCACCACAGGGTGTACGGTaGGGGTGGCAGTGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLFLLFSEGPCVLLPSPQGVR*GWQCQQ Trigger: CTGCTGGCACTGCCACCCTCACCGTACACCCTGTGG...TGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGCTCCACAGGGTGTACGGTaGGGGTGGCAGTGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFLLFSEGPCVLLPSAPQGVR*GWQCQQ Trigger: CTGCTGGCACTGCCACCCTCACCGTACACCCTGTGG...AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGGTAGTACCTGCTGGGTaGGGTCCAGGAGGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSFCSAKALASFCLQVVPAG*GPGGPC Trigger: ACAGGGGCCTCCTGGACCTCACCCAGCAGGTACTAC...CTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGGCCCCTGCACTCCAGTGGGAGGGGAAGGAGAGGAGCCACTCCTGTCTGCTTGCAGGATCTGCTTaGCTGCCTGGAAGATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VMAPALQWEGKERSHSCLLAGSA*LPGRFR Trigger: ACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAG...CAGACAGGAGTGGCTCCTCTCCTTCCCCTCCCACTGGAGTGCAGGGGCCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCCTTGGGCCTTCCTCTTaGAGGATCTGCTTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: STPFSLPSVQRRPLRPSALGPSS*RICLAA Trigger: GGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAG...GGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | GGTGATGGCCCCTGCACTCCAGTGGGAGGGGAAGGAGAGGAGCCACTCCTGTCTTGCGCTGAGAACTGGTaGGTTTGGTACAAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDGPCTPVGGEGEEPLLSCAENW*VWYKLA Trigger: AGCCAACTTGTACCAAACGCACCAGTTCTCAGCGCA...AGACAGGAGTGGCTCCTCTCCTTCCCCTCCCACTGGAGTGCAGGGGCCATCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCCGCGTAGGGGAAGATaGCGATCACGGTGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPLLSSFCSAKALASFCLPRRGR*RSRWES Trigger: TGACTCCCACCGTGATCGCCATCTTCCCCTACGCGG...AAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | GGGATTAGAGGACATGGTGTGCAGCATGCGTGCAGAGCTGGTGATGGCCCCTGCTTCCGTCTGGTGGTATaGGCCAGTCATAGGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIRGHGVQHACRAGDGPCFRLVV*ASHRHV Trigger: AACGTGCCTATGACTGGCTCATACCACCAGACGGAA...GCAGGGGCCATCACCAGCTCTGCACGCATGCTGCACACCATGTCCTCTAATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGGAAGCCAGTGGAGAGTaGAGCCTTCATCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAPPSLFLLFSEGPCVLLEASGE*SLHQAG Trigger: CCCAGCCTGATGAAGGCTGCACTCTCCACTGGCTTC...CAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGTGGGGGACAGGCCCTTaGAGAAGCCCCGGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFFLQCKHPLLSSFCSAKWGTGP*RSPGCL Trigger: AAGGCACCCGGGGCTTCTTCAAGGGCCTGTCCCCCA...CTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGCCCGTTACTCCTGACATCTaGTTTGGCGTCATAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFCCSKPRKPTGHPSQKPVTPDI*FGVIAN Trigger: GTTGGCTATGACGCCAAAGCAGATGTCAGGAGTAAC...GGGCTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCTGCAAGCCAGAAAGGCCCCTCCCCCATCATCCTCCCTCAGATGGGATGTGTCCTTTCCAGAATaGTCTTGGGCCTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLQARKAPPPSSSLRWDVSFPE*SWAFLL Trigger: CAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACAC...ATCCCATCTGAGGGAGGATGATGGGGGAGGGGCCTTTCTGGCTTGCAGCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTGCAAGCCAGAAAGGCCCCTCCCCCATCATCCTCCCTCAGATGGGATCCTATGGACAGAATCTaGGCTGGAACGTGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLQARKAPPPSSSLRWDPMDRI*AGTCPF Trigger: GAAAGGACACGTTCCAGCCCAGATTCTGTCCATAGG...ATCCCATCTGAGGGAGGATGATGGGGGAGGGGCCTTTCTGGCTTGCAGCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGCATGGCTACCTCAGGGCTGCAAGCCAGAAAGGCCCCTCCCCCATCATCCGCGTTTGGTACAAGTTaGCTTGGTAGAGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSMATSGLQARKAPPPSSAFGTS*LGRAAQ Trigger: CTGAGCTGCTCTACCAAGCCAACTTGTACCAAACGC...GGATGATGGGGGAGGGGCCTTTCTGGCTTGCAGCCCTGAGGTAGCCATGCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CACCTAGGCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCGTAGTACCTGCTGGGTaGGGTCCAGGAGGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLGLLFTVQAPPSLFLLFVVPAG*GPGGPC Trigger: ACAGGGGCCTCCTGGACCTCACCCAGCAGGTACTAC...GAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGCCTAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTGGCATTGGGGTCACTTaGACACAGGCGTTCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLLSSFCSAKALASFCLGIGVT*TQAFNL Trigger: CAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCC...AAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTCCTATGGACAGAATCTaGGCTGGAACGTGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: APPSLFLLFSEGPCVLLPPMDRI*AGTCPF Trigger: GAAAGGACACGTTCCAGCCCAGATTCTGTCCATAGG...AGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCAGCTCCGTAGCCTATaGACAGAATCTGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAPPSLFLLFSEGPCVLLQLRSL*TESGLE Trigger: TTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTG...CAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | AAACACTTCTGCTGCTCCAAGCCCAGGAAGCCAACGGGCCACCCATCTCAGAAGCAGCTCCGTAGCCTATaGACAGAATCTGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHFCCSKPRKPTGHPSQKQLRSL*TESGLE Trigger: TTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTG...CTTCTGAGATGGGTGGCCCGTTGGCTTCCTGGGCTTGGAGCAGCAGAAGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTGCGTTTGGTACAAGTTaGCTTGGTAGAGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: APPSLFLLFSEGPCVLLPAFGTS*LGRAAQ Trigger: CTGAGCTGCTCTACCAAGCCAACTTGTACCAAACGC...AGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGACCTGTTGTGGAGCCTCACAGGCACAAAGGCTTGGGCCTGGGAGTTCAAGATGGCGATCACGGTaGGAGTCAAGCCTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTCCGASQAQRLGPGSSRWRSR*ESSLCR Trigger: TCTACAAAGGCTTGACTCCCACCGTGATCGCCATCT...TGAACTCCCAGGCCCAAGCCTTTGTGCCTGTGAGGCTCCACAACAGGTCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCAGCAATAGGGTCACAAAACACTTCTGCTGCTCCAAGCCCAGGAAGCCCGCGTAGGGGAAGATaGCGATCACGGTGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISPAIGSQNTSAAPSPGSPRRGR*RSRWES Trigger: TGACTCCCACCGTGATCGCCATCTTCCCCTACGCGG...GCTTCCTGGGCTTGGAGCAGCAGAAGTGTTTTGTGACCCTATTGCTGGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTGTGTCCTTTCCAGAATaGTCTTGGGCCTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLLSSFCSAKALASFCLVSFPE*SWAFLL Trigger: CAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACAC...AAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCCGTTCAATCTGGAGCTaGAAACGGATCTTGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: STPFSLPSVQRRPLRPSARSIWS*KRILMT Trigger: CGTCATCAAGATCCGTTTCCAGCTCCAGATTGAACG...GGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGGGACAGAATCTGGGCTaGAACGTGTCCTTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSFCSAKALASFCLQGQNLG*NVSFPE Trigger: TTCTGGAAAGGACACGTTCCAGCCCAGATTCTGTCC...CTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAAGATGGCGATCACGGTaGGAGTCAAGCCTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLFLLFSEGPCVLLPSRWRSR*ESSLCR Trigger: TCTACAAAGGCTTGACTCCCACCGTGATCGCCATCT...TGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGACTTGGAGTTACTCCTaGCATCTGCTTTGGCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSFCSAKALASFCLQTWSYS*HLLWRH Trigger: ATGACGCCAAAGCAGATGTCAGGAGTAACTCCAAGT...CTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGCCCTCCCAAGTGACCCTGGGTCTTCAGAATCAGGAGCCAAGATCAGATTCCGTCTGGTGGTATaGGCCAGTCATAGGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SEALPSDPGSSESGAKIRFRLVV*ASHRHV Trigger: AACGTGCCTATGACTGGCTCATACCACCAGACGGAA...TCTGATCTTGGCTCCTGATTCTGAAGACCCAGGGTCACTTGGGAGGGCTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGGTTACTCCTGACATCTaGTTTGGCGTCATAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QAPPSLFLLFSEGPCVLLVTPDI*FGVIAN Trigger: GTTGGCTATGACGCCAAAGCAGATGTCAGGAGTAAC...CAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGCTTCCTCTTGCAGGATCTaGTTGGCTGCCTGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSLFLLFSEGPCVLLPSASSCRI*LAAWKI Trigger: AATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGA...AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTCTTGGGCCTTCCTCTTaGAGGATCTGCTTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQCKHPLLSSFCSAKALLGPSS*RICLAA Trigger: GGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAG...AAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTTTCACGATCAGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATGGGAAGCCAGTGGAGAGTaGAGCCTTCATCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFHDQGHSQQALQSKLWEASGE*SLHQAG Trigger: CCCAGCCTGATGAAGGCTGCACTCTCCACTGGCTTC...CCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCTGATCGTGAAAACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTAGATTCCGTGGTATTTaGCATTGGGGTCACTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SASTPFSLPSVQRRPLRPRFRGI*HWGHLD Trigger: GTCCAAGTGACCCCAATGCCAAATACCACGGAATCT...AGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTAGATTCCGTGGTATTTaGCATTGGGGTCACTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPLLSSFCSAKALASFCLRFRGI*HWGHLD Trigger: GTCCAAGTGACCCCAATGCCAAATACCACGGAATCT...AAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCCCTCCCAAGTGACCCTGGGTCTTCAGAATCAGGAGCCAAGATCAGACTTGCAGGATCTGCTTaGCTGCCTGGAAGATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEALPSDPGSSESGAKIRLAGSA*LPGRFR Trigger: ACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAG...TCTGATCTTGGCTCCTGATTCTGAAGACCCAGGGTCACTTGGGAGGGCTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGCTACTTGGAGTTACTCCTaGCATCTGCTTTGGCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSLFLLFSEGPCVLLPSATWSYS*HLLWRH Trigger: ATGACGCCAAAGCAGATGTCAGGAGTAACTCCAAGT...AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACAACTATCTGTCTTCCCTCCTTATGCAGTGGAAGAGGTTACAGAAGAGCCTTGGGCCTTCCTCTTaGAGGATCTGCTTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHNYLSSLLMQWKRLQKSLGPSS*RICLAA Trigger: GGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAG...GCTCTTCTGTAACCTCTTCCACTGCATAAGGAGGGAAGACAGATAGTTGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGTTAAGGTTCCCTGTTTaGTTTCCGTCTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSFCSAKALASFCLQLRFPV*FPSGGM Trigger: CATACCACCAGACGGAAAGCAAACAGGGAACCTTAA...CTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGCTCGTTCAATCTGGAGCTaGAAACGGATCTTGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: PSLFLLFSEGPCVLLPSARSIWS*KRILMT Trigger: CGTCATCAAGATCCGTTTCCAGCTCCAGATTGAACG...AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAGGTGAGACGCATGCGCACCAGGTTCCTCCACCTAGGCCTTCTTTTTACAAGATTCCGTGGTATTTaGCATTGGGGTCACTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEVRRMRTRFLHLGLLFTRFRGI*HWGHLD Trigger: GTCCAAGTGACCCCAATGCCAAATACCACGGAATCT...TGTAAAAAGAAGGCCTAGGTGGAGGAACCTGGTGCGCATGCGTCTCACCTCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS-3UTR CCA 90 bp | CACCTAGGCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCGGCATTGGGGTCACTTaGACACAGGCGTTCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLGLLFTVQAPPSLFLLFGIGVT*TQAFNL Trigger: CAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCC...GAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGCCTAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS-3UTR CCA 90 bp | CCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCAGCTCCGTAGCCTATaGACAGAATCTGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSFYSASTPFSLPSVQRRQLRSL*TESGLE Trigger: TTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTG...CCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCCCTCCCAAGTGACCCTGGGTCTTCAGAATCAGGAGCCAAGATCAGAAAGTGCGCTGAGAACTaGTGCGTTTGGTACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEALPSDPGSSESGAKIRKCAEN*CVWYKL Trigger: CAACTTGTACCAAACGCACCAGTTCTCAGCGCACTT...TCTGATCTTGGCTCCTGATTCTGAAGACCCAGGGTCACTTGGGAGGGCTTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCAGCAATAGGGTCACAAAACACTTCTGCTGCTCCAAGCCCAGGAAGCACTTGGAGTTACTCCTaGCATCTGCTTTGGCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPAIGSQNTSAAPSPGSTWSYS*HLLWRH Trigger: ATGACGCCAAAGCAGATGTCAGGAGTAACTCCAAGT...GCTTCCTGGGCTTGGAGCAGCAGAAGTGTTTTGTGACCCTATTGCTGGAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGTCCTCTTGCAGGATCTaGTTGGCTGCCTGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSFYSASTPFSLPSVQRRSSCRI*LAAWKI Trigger: AATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGA...CCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGTGCGCTGAGAACTGGTaGGTTTGGTACAAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFFLQCKHPLLSSFCSAKCAENW*VWYKLA Trigger: AGCCAACTTGTACCAAACGCACCAGTTCTCAGCGCA...CTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CCTCACAACTATCTGTCTTCCCTCCTTATGCAGTGGAAGAGGTTACAGAAGAGCCTTGCAGGATCTGCTTaGCTGCCTGGAAGATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHNYLSSLLMQWKRLQKSLAGSA*LPGRFR Trigger: ACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAG...GCTCTTCTGTAACCTCTTCCACTGCATAAGGAGGGAAGACAGATAGTTGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
||
| CDS-3UTR CCA 90 bp | CACCTAGGCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCGGACAGAATCTGGGCTaGAACGTGTCCTTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLGLLFTVQAPPSLFLLFGQNLG*NVSFPE Trigger: TTCTGGAAAGGACACGTTCCAGCCCAGATTCTGTCC...GAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGCCTAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCGTTTGGTACAAGTTaGCTTGGTAGAGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFFLQCKHPLLSSFCSAKAFGTS*LGRAAQ Trigger: CTGAGCTGCTCTACCAAGCCAACTTGTACCAAACGC...CTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGGTTACTCCTGACATCTaGTTTGGCGTCATAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFYSASTPFSLPSVQRRVTPDI*FGVIAN Trigger: GTTGGCTATGACGCCAAAGCAGATGTCAGGAGTAAC...CCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS-3UTR GCA 90 bp | CAGTTTTCACGATCAGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATGGCATGCGCTGAGAACTGGTaGGTTTGGTACAAGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QFSRSGPFPAGITIQVMACAENW*VWYKLA Trigger: AGCCAACTTGTACCAAACGCACCAGTTCTCAGCGCA...TGCCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCTGATCGTGAAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTCACGATCAGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATGGCACCTATGGACAGAATCTaGGCTGGAACGTGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFSRSGPFPAGITIQVMAPMDRI*AGTCPF Trigger: GAAAGGACACGTTCCAGCCCAGATTCTGTCCATAGG...TGCCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCTGATCGTGAAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS-3UTR CCA 90 bp | TTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTAAGTGCGCTGAGAACTaGTGCGTTTGGTACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLQCKHPLLSSFCSAKALKCAEN*CVWYKL Trigger: CAACTTGTACCAAACGCACCAGTTCTCAGCGCACTT...AAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGTTAAGGTTCCCTGTTTaGTTTCCGTCTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: AFFLQCKHPLLSSFCSAKLRFPV*FPSGGM Trigger: CATACCACCAGACGGAAAGCAAACAGGGAACCTTAA...CTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS-3UTR CCA 90 bp | CCTCACAACTATCTGTCTTCCCTCCTTATGCAGTGGAAGAGGTTACAGAAGAGCCGTTCAATCTGGAGCTaGAAACGGATCTTGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: PHNYLSSLLMQWKRLQKSRSIWS*KRILMT Trigger: CGTCATCAAGATCCGTTTCCAGCTCCAGATTGAACG...GCTCTTCTGTAACCTCTTCCACTGCATAAGGAGGGAAGACAGATAGTTGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTCACGATCAGGGCCATTCCCAGCAGGCATTACAATCCAAGTTATGGCAAAGTGCGCTGAGAACTaGTGCGTTTGGTACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QFSRSGPFPAGITIQVMAKCAEN*CVWYKL Trigger: CAACTTGTACCAAACGCACCAGTTCTCAGCGCACTT...TGCCATAACTTGGATTGTAATGCCTGCTGGGAATGGCCCTGATCGTGAAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS TCA 90 bp | CCTGAGCGGCAAGGCGGGTACGCAGGACGTCCACAGGGTGTACGGTaGGGGTGGCAGTGCCAGCAGACAGGCCGCCGCACACAAAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PERQGGYAGRPQGVR*GWQCQQTGRRTQSA Trigger: CGCACTTTGTGTGCGGCGGCCTGTCTGCTGGCACTGCCACCCTCACCGTACACCCTGTGGACGTCCTGCGTACCCGCCTTGCCGCTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS GCA 90 bp | CGCACCTGGCCAAAGGCAGACCGGGCATGTTCGAACCCGCCCACCTaGAGGCGCTTCTTGATGAGGTCCAGGGGATATGTAAAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTWPKADRACSNPPT*RRFLMRSRGYVKVL Trigger: CAAGACCTTTACATATCCCCTGGACCTCATCAAGAAGCGCCTGCAGGTGGGCGGGTTCGAACATGCCCGGTCTGCCTTTGGCCAGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | AGCAGGAGAACTGCAGGCCCGCGTAGGGGAAGATGGCGATCACGGTaGGAGTCAAGCCTTTGTAGAAGACGAAGGGGCCCTCGGTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SRRTAGPRRGRWRSR*ESSLCRRRRGPRSY Trigger: ATAAGACCGAGGGCCCCTTCGTCTTCTACAAAGGCTTGACTCCCACCGTGATCGCCATCTTCCCCTACGCGGGCCTGCAGTTCTCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | TTAAGGAGCGGTAGCAGGAGAACTGCAGGCCCGCGTAGGGGAAGATaGCGATCACGGTGGGAGTCAAGCCTTTGTAGAAGACGAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSGSRRTAGPRRGR*RSRWESSLCRRRRG Trigger: GCCCCTTCGTCTTCTACAAAGGCTTGACTCCCACCGTGATCGCCATCTTCCCCTACGCGGGCCTGCAGTTCTCCTGCTACCGCTCCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | ATAACTCCCGAACCACAGCCACAAAGCAGGTTTTTAAGGTTCCCTTaGGCTCGCCCTGAGCGGCAAGGCGGGTACGCAGGACGTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ITPEPQPQSRFLRFP*ARPERQGGYAGRPQ Trigger: CTGTGGACGTCCTGCGTACCCGCCTTGCCGCTCAGGGCGAGCCCAAGGGAACCTTAAAAACCTGCTTTGTGGCTGTGGTTCGGGAGTTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
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| CDS-3UTR CAA 90 bp | GCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTACCGCCACCTCCAACTaGGAGTTACTCCTGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: APPSLFLLFSEGPCVLLPTATSN*ELLLTS Trigger: AGATGTCAGGAGTAACTCCAAGTTGGAGGTGGCGGT...AGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS-3UTR CAA 90 bp | GCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTAGCTGGAAACGGATCTaGATGACGTCCAAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: APPSLFLLFSEGPCVLLPSWKRI*MTSKGL Trigger: CAGCCCTTTGGACGTCATCAAGATCCGTTTCCAGCT...AGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | GGGCCTTCCTCTTGCAGGATCTGCTTGGCTGCCTGGAAGATTCCGTaGTATTTGGCATTGGGGTCACTTGGACACAGGCGTTCAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSSCRICLAAWKIP*YLALGSLGHRRSIW Trigger: CCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS-3UTR CAA 90 bp | CCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAACCGCCACCTCCAACTaGGAGTTACTCCTGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: PPSLFLLFSEGPCVLLPSTATSN*ELLLTS Trigger: AGATGTCAGGAGTAACTCCAAGTTGGAGGTGGCGGT...TGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTGCGTCCTTCTGCCTTCAGCTTCTTGCAGGATCTGCTaGGCTGCCTGGAAGATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSLFLLFSEGPCVLLPSASCRIC*AAWKIP Trigger: CGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGA...AGCTGAAGGCAGAAGGACGCAAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS GCA 90 bp | TGGGCTGGAACGTGTCCTTTCCAGAATGCTCTTGGGCCTTCCTCTTaGAGGATCTGCTTGGCTGCCTGGAAGATTCCGTGGTATTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WAGTCPFQNALGPSS*RICLAAWKIPWYLA Trigger: TGCCAAATACCACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACACGTTCCAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | CTTTGTAGAAGACGAAGGGGCCCTCGGTCTTATACATGGTCCGTATaGCCTCTCGCAGATTGTTATAGATCTTGGGCTCGCCCTGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCRRRRGPRSYTWSV*PLADCYRSWARPER Trigger: CCGCTCAGGGCGAGCCCAAGATCTATAACAATCTGCGAGAGGCCATACGGACCATGTATAAGACCGAGGGCCCCTTCGTCTTCTACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS-3UTR CAA 90 bp | TCGGAGGTGAGACGCATGCGCACCAGGTTCCTCCACCTAGGCCTTCTTTTTACAAGCTGGAAACGGATCTaGATGACGTCCAAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEVRRMRTRFLHLGLLFTSWKRI*MTSKGL Trigger: CAGCCCTTTGGACGTCATCAAGATCCGTTTCCAGCT...TGTAAAAAGAAGGCCTAGGTGGAGGAACCTGGTGCGCATGCGTCTCACCTCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS TCA 90 bp | TTATGCAGTGGAAGAGGTTACAGAAGAGCTCGTACCAGAAGAACATaGAGCCAGTGGAGAGTGCAGCCTTCATCAGGCTGGGGGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCSGRGYRRARTRRT*SQWRVQPSSGWGTG Trigger: GCCTGTCCCCCAGCCTGATGAAGGCTGCACTCTCCACTGGCTTCATGTTCTTCTGGTACGAGCTCTTCTGTAACCTCTTCCACTGCATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | CCGTGGTATTTGGCATTGGGGTCACTTGGACACAGGCGTTCAATCTaGAGCTGGAAACGGATCTTGATGACGTCCAAAGGGCTGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWYLALGSLGHRRSI*SWKRILMTSKGLIR Trigger: CCTGATCAGCCCTTTGGACGTCATCAAGATCCGTTTCCAGCTCCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | GGCCAAAAATTGGACAGCTCCGTAGCCTATGGACAGAATCTGGGCTaGAACGTGTCCTTTCCAGAATGCTCTTGGGCCTTCCTCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQKLDSSVAYGQNLG*NVSFPECSWAFLLQ Trigger: CTGCAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACACGTTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTGTCCAATTTTTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAGCCCTCCCAAGTGACCCTGGGTCTTCAGAATCAGGAGCCAAGATCAGAAGCTGGAAACGGATCTaGATGACGTCCAAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEALPSDPGSSESGAKIRSWKRI*MTSKGL Trigger: CAGCCCTTTGGACGTCATCAAGATCCGTTTCCAGCT...TCTGATCTTGGCTCCTGATTCTGAAGACCCAGGGTCACTTGGGAGGGCTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021089.11 ENSMUST00000178003.8 |
||
| CDS CCA 90 bp | CTTGGCTGCCTGGAAGATTCCGTGGTATTTGGCATTGGGGTCACTTaGACACAGGCGTTCAATCTGGAGCTGGAAACGGATCTTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGCLEDSVVFGIGVT*TQAFNLELETDLDD Trigger: GTCATCAAGATCCGTTTCCAGCTCCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 90 bp | GAGTCAAGCCTTTGTAGAAGACGAAGGGGCCCTCGGTCTTATACATaGTCCGTATGGCCTCTCGCAGATTGTTATAGATCTTGGGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ESSLCRRRRGPRSYT*SVWPLADCYRSWAR Trigger: GCGAGCCCAAGATCTATAACAATCTGCGAGAGGCCATACGGACCATGTATAAGACCGAGGGCCCCTTCGTCTTCTACAAAGGCTTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGCCCTTTCTTGCAGGATCTGCTaGGCTGCCTGGAAGATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLQCKHPLLSSFCSAKALSCRIC*AAWKIP Trigger: CGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGA...AAGGGCCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTTTTTACAGTGCAAGCACCCCCTTCTCTCTTCCTTCTGTTCAGCGAAGGTCTTGCAGGATCTGCTaGGCTGCCTGGAAGATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSFYSASTPFSLPSVQRRSCRIC*AAWKIP Trigger: CGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGA...CCTTCGCTGAACAGAAGGAAGAGAGAAGGGGGTGCTTGCACTGTAAAAAGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
||
| CDS CCA 90 bp | CGCCGCACACAAAGTGCGCTGAGAACTGGTGCGTTTGGTACAAGTTaGCTTGGTAGAGCAGCTCAGTCAACTCTTCAAAGGCCAAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: RRTQSALRTGAFGTS*LGRAAQSTLQRPKT Trigger: AGTTTTTGGCCTTTGAAGAGTTGACTGAGCTGCTCTACCAAGCCAACTTGTACCAAACGCACCAGTTCTCAGCGCACTTTGTGTGCGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135552.2 |
||
| CDS CCA 90 bp | CAGTCAACTCTTCAAAGGCCAAAAATTGGACAGCTCCGTAGCCTATaGACAGAATCTGGGCTGGAACGTGTCCTTTCCAGAATGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QSTLQRPKIGQLRSL*TESGLERVLSRMLL Trigger: CAAGAGCATTCTGGAAAGGACACGTTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTGTCCAATTTTTGGCCTTTGAAGAGTTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS TCA 72 bp | CAAGGCGGGTACGCAGGACGTCCACAGGGTGTACGGTaGGGGTGGCAGTGCCAGCAGACAGGCCGCCGCACA | + |
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Preference number: 6 (lower is better) Translates to: QGGYAGRPQGVR*GWQCQQTGRRT Trigger: TGTGCGGCGGCCTGTCTGCTGGCACTGCCACCCTCACCGTACACCCTGTGGACGTCCTGCGTACCCGCCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS TCA 72 bp | AGCCCCGGGTGCCTTCTTCCTGTAGTACCTGCTGGGTaGGGTCCAGGAGGCCCCTGTAGCTCCGCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPGCLLPVVPAG*GPGGPCSSAPG Trigger: GCCAGGTGCGGAGCTACAGGGGCCTCCTGGACCTCACCCAGCAGGTACTACAGGAAGAAGGCACCCGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 90 bp | AAGCCAGTGGAGAGTGCAGCCTTCATCAGGCTGGGGGACAGGCCCTaGAAGAAGCCCCGGGTGCCTTCTTCCTGTAGTACCTGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: KPVESAAFIRLGDRP*KKPRVPSSCSTCWV Trigger: CACCCAGCAGGTACTACAGGAAGAAGGCACCCGGGGCTTCTTCAAGGGCCTGTCCCCCAGCCTGATGAAGGCTGCACTCTCCACTGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS TCA 72 bp | ACAAAGCAGGTTTTTAAGGTTCCCTTGGGCTCGCCCTaGGCGGCAAGGCGGGTACGCAGGACGTCCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: TKQVFKVPLGSP*AARRVRRTSTG Trigger: CCCTGTGGACGTCCTGCGTACCCGCCTTGCCGCTCAGGGCGAGCCCAAGGGAACCTTAAAAACCTGCTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
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| CDS CCA 72 bp | ACTGCAGGCCCGCGTAGGGGAAGATGGCGATCACGGTaGGAGTCAAGCCTTTGTAGAAGACGAAGGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TAGPRRGRWRSR*ESSLCRRRRGP Trigger: AGGGCCCCTTCGTCTTCTACAAAGGCTTGACTCCCACCGTGATCGCCATCTTCCCCTACGCGGGCCTGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | GAGAGTGCAGCCTTCATCAGGCTGGGGGACAGGCCCTaGAAGAAGCCCCGGGTGCCTTCTTCCTGTAGTACC | + |
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Preference number: 6 (lower is better) Translates to: ESAAFIRLGDRP*KKPRVPSSCST Trigger: GGTACTACAGGAAGAAGGCACCCGGGGCTTCTTCAAGGGCCTGTCCCCCAGCCTGATGAAGGCTGCACTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS GCA 72 bp | GTGGCAGTGCCAGCAGACAGGCCGCCGCACACAAAGTaGGCTGAGAACTGGTGCGTTTGGTACAAGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VAVPADRPPHTK*AENWCVWYKLA Trigger: AGCCAACTTGTACCAAACGCACCAGTTCTCAGCGCACTTTGTGTGCGGCGGCCTGTCTGCTGGCACTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CCA 72 bp | GAACCACAGCCACAAAGCAGGTTTTTAAGGTTCCCTTaGGCTCGCCCTGAGCGGCAAGGCGGGTACGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EPQPQSRFLRFP*ARPERQGGYAG Trigger: TCCTGCGTACCCGCCTTGCCGCTCAGGGCGAGCCCAAGGGAACCTTAAAAACCTGCTTTGTGGCTGTGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106503.10 |
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| CDS CCA 72 bp | GGTAGCAGGAGAACTGCAGGCCCGCGTAGGGGAAGATaGCGATCACGGTGGGAGTCAAGCCTTTGTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GSRRTAGPRRGR*RSRWESSLCRR Trigger: TCTTCTACAAAGGCTTGACTCCCACCGTGATCGCCATCTTCCCCTACGCGGGCCTGCAGTTCTCCTGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | CGGGCATGTTCGAACCCGCCCACCTGCAGGCGCTTCTaGATGAGGTCCAGGGGATATGTAAAGGTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RACSNPPTCRRF*MRSRGYVKVLL Trigger: CAGCAAGACCTTTACATATCCCCTGGACCTCATCAAGAAGCGCCTGCAGGTGGGCGGGTTCGAACATGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 90 bp | CTGGGCTGGAACGTGTCCTTTCCAGAATGCTCTTGGGCCTTCCTCTaGCAGGATCTGCTTGGCTGCCTGGAAGATTCCGTGGTATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LGWNVSFPECSWAFL*QDLLGCLEDSVVFG Trigger: GCCAAATACCACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACACGTTCCAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | GAATCTGGGCTGGAACGTGTCCTTTCCAGAATGCTCTaGGGCCTTCCTCTTGCAGGATCTGCTTGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ESGLERVLSRML*GLPLAGSAWLP Trigger: AGGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACACGTTCCAGCCCAGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 90 bp | GGGTCACTTGGACACAGGCGTTCAATCTGGAGCTGGAAACGGATCTaGATGACGTCCAAAGGGCTGATCAGGGCACGGGTGACAAATCCT | + |
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Preference number: 6 (lower is better) Translates to: GSLGHRRSIWSWKRI*MTSKGLIRARVTNP Trigger: AGGATTTGTCACCCGTGCCCTGATCAGCCCTTTGGACGTCATCAAGATCCGTTTCCAGCTCCAGATTGAACGCCTGTGTCCAAGTGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 72 bp | GCTTGGCTGCCTGGAAGATTCCGTGGTATTTGGCATTaGGGTCACTTGGACACAGGCGTTCAATCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: AWLPGRFRGIWH*GHLDTGVQSGA Trigger: AGCTCCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 72 bp | TTGGACAGCTCCGTAGCCTATGGACAGAATCTGGGCTaGAACGTGTCCTTTCCAGAATGCTCTTGGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LDSSVAYGQNLG*NVSFPECSWAF Trigger: GAAGGCCCAAGAGCATTCTGGAAAGGACACGTTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 72 bp | AGACGAAGGGGCCCTCGGTCTTATACATGGTCCGTATaGCCTCTCGCAGATTGTTATAGATCTTGGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RRRGPRSYTWSV*PLADCYRSWAR Trigger: GCGAGCCCAAGATCTATAACAATCTGCGAGAGGCCATACGGACCATGTATAAGACCGAGGGCCCCTTCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | TGCTTGGCTGCCTGGAAGATTCCGTGGTATTTGGCATaGGGGTCACTTGGACACAGGCGTTCAATCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CLAAWKIPWYLA*GSLGHRRSIWS Trigger: GCTCCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 72 bp | TTGGCATTGGGGTCACTTGGACACAGGCGTTCAATCTaGAGCTGGAAACGGATCTTGATGACGTCCAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LALGSLGHRRSI*SWKRILMTSKG Trigger: CCCTTTGGACGTCATCAAGATCCGTTTCCAGCTCCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CCA 72 bp | GGATCTGCTTGGCTGCCTGGAAGATTCCGTGGTATTTaGCATTGGGGTCACTTGGACACAGGCGTTCAATCT | + |
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Preference number: 6 (lower is better) Translates to: GSAWLPGRFRGI*HWGHLDTGVQS Trigger: AGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAGCAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | CCTGGAAGATTCCGTGGTATTTGGCATTGGGGTCACTaGGACACAGGCGTTCAATCTGGAGCTGGAAACGGA | + |
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Preference number: 6 (lower is better) Translates to: PGRFRGIWHWGH*DTGVQSGAGNG Trigger: TCCGTTTCCAGCTCCAGATTGAACGCCTGTGTCCAAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | CAGAATGCTCTTGGGCCTTCCTCTTGCAGGATCTGCTaGGCTGCCTGGAAGATTCCGTGGTATTTGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: QNALGPSSCRIC*AAWKIPWYLAL Trigger: CAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAGAGCATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 90 bp | TGTCCTTTCCAGAATGCTCTTGGGCCTTCCTCTTGCAGGATCTGCTaGGCTGCCTGGAAGATTCCGTGGTATTTGGCATTGGGGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: CPFQNALGPSSCRIC*AAWKIPWYLALGSL Trigger: AAGTGACCCCAATGCCAAATACCACGGAATCTTCCAGGCAGCCAAGCAGATCCTGCAAGAGGAAGGCCCAAGAGCATTCTGGAAAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 90 bp | GTTGGCTTGGTAGAGCAGCTCAGTCAACTCTTCAAAGGCCAAAAATaGGACAGCTCCGTAGCCTATGGACAGAATCTGGGCTGGAACGTG | + |
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Preference number: 6 (lower is better) Translates to: VGLVEQLSQLFKGQK*DSSVAYGQNLGWNV Trigger: CACGTTCCAGCCCAGATTCTGTCCATAGGCTACGGAGCTGTCCAATTTTTGGCCTTTGAAGAGTTGACTGAGCTGCTCTACCAAGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | CGCTTCTTGATGAGGTCCAGGGGATATGTAAAGGTCTaGCTGATAACTCCCGAACCACAGCCACAAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RFLMRSRGYVKV*LITPEPQPQSR Trigger: CCTGCTTTGTGGCTGTGGTTCGGGAGTTATCAGCAAGACCTTTACATATCCCCTGGACCTCATCAAGAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 90 bp | ACCTGCAGGCGCTTCTTGATGAGGTCCAGGGGATATGTAAAGGTCTaGCTGATAACTCCCGAACCACAGCCACAAAGCAGGTTTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: TCRRFLMRSRGYVKV*LITPEPQPQSRFLR Trigger: CCTTAAAAACCTGCTTTGTGGCTGTGGTTCGGGAGTTATCAGCAAGACCTTTACATATCCCCTGGACCTCATCAAGAAGCGCCTGCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | GTAGAGCAGCTCAGTCAACTCTTCAAAGGCCAAAAATaGGACAGCTCCGTAGCCTATGGACAGAATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: VEQLSQLFKGQK*DSSVAYGQNLG Trigger: GCCCAGATTCTGTCCATAGGCTACGGAGCTGTCCAATTTTTGGCCTTTGAAGAGTTGACTGAGCTGCTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000106503.10 ENSMUST00000178003.8 |
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| CDS CAA 72 bp | ACCACAGCCACAAAGCAGGTTTTTAAGGTTCCCTGTTaGCTTTCCGTCTGGTGGTATGAGCCAGTCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: TTATKQVFKVPC*LSVWWYEPVIG Trigger: GCCTATGACTGGCTCATACCACCAGACGGAAAGCAAACAGGGAACCTTAAAAACCTGCTTTGTGGCTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021089.11 ENSMUST00000135552.2 ENSMUST00000178003.8 |
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