Pregenerated sensors for SLC25A18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004902Ensembl transcript IDs: ENSMUST00000112682.4
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACTGTCTGTGGGGCCCAAGAAGGCACAGCTTGACTCTGCAGAATaGCAGTCATCTGCTATGCTGATTACAGGACAAGGATTTAACCAG | + |
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Preference number: 1 (lower is better) Translates to: ELSVGPKKAQLDSAE*QSSAMLITGQGFNQ Trigger: CTGGTTAAATCCTTGTCCTGTAATCAGCATAGCAGATGACTGTCATTCTGCAGAGTCAAGCTGTGCCTTCTTGGGCCCCACAGACAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR CCA 90 bp | TTTAGTTTTCATAAAGGAGATGAAGGCTCTACTCGCTTAGTAAAATaGGTCATTTCTTCTGAGGTAGCACTACAGGTTAGAGACCACGTA | + |
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Preference number: 1 (lower is better) Translates to: FSFHKGDEGSTRLVK*VISSEVALQVRDHV Trigger: TACGTGGTCTCTAACCTGTAGTGCTACCTCAGAAGAAATGACCCATTTTACTAAGCGAGTAGAGCCTTCATCTCCTTTATGAAAACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCAGTCATCTGCTATGCTaGTTACAGGACAAGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: NSSWKTVMNCLWGPRRHSSHLLC*LQDKDL Trigger: TAAATCCTTGTCCTGTAATCAGCATAGCAGATGACT...GCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR CAA 90 bp | CCCTTCTGTCTTACTGCACACGGTCCTGCCATAGTACATAAGAGGTaGGGGCTTCCGAACATCTCTGGTTCAGAAAGTTTAGTTTTCATA | + |
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Preference number: 2 (lower is better) Translates to: PFCLTAHGPAIVHKR*GLPNISGSESLVFI Trigger: TATGAAAACTAAACTTTCTGAACCAGAGATGTTCGGAAGCCCCAACCTCTTATGTACTATGGCAGGACCGTGTGCAGTAAGACAGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCCCTTCTGTCTTACTGCACACGGTCCTGCCATAGTACATAAGAGGTTGACTCGCTTAGTAAAATaGGTCATTTCTTCTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: EEPFCLTAHGPAIVHKRLTRLVK*VISSEV Trigger: TACCTCAGAAGAAATGACCCATTTTACTAAGCGAGT...CAACCTCTTATGTACTATGGCAGGACCGTGTGCAGTAAGACAGAAGGGCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR CCA 72 bp | TCTGTGCCACACTTGCCTGCAGTGGGGATGTTAGTGTaGAAGAGCCCTTCTGTCTTACTGCACACGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SVPHLPAVGMLV*KSPSVLLHTVL Trigger: CAGGACCGTGTGCAGTAAGACAGAAGGGCTCTTCCACACTAACATCCCCACTGCAGGCAAGTGTGGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR TCA 72 bp | ATACTTCAGGGTGAGTATCTGGGGCAGGACCGCTGCTaGGGTGGCCAGAATGTTCATTCAGGCTCTCAGACT | + |
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Preference number: 3 (lower is better) Translates to: ILQGEYLGQDRC*GGQNVHSGSQT Trigger: AGTCTGAGAGCCTGAATGAACATTCTGGCCACCTCAGCAGCGGTCCTGCCCCAGATACTCACCCTGAAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR TCA 72 bp | GTGGGGCCCAAGAAGGCACAGCTTGACTCTGCAGAATaGCAGTCATCTGCTATGCTGATTACAGGACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: VGPKKAQLDSAE*QSSAMLITGQG Trigger: TCCTTGTCCTGTAATCAGCATAGCAGATGACTGTCATTCTGCAGAGTCAAGCTGTGCCTTCTTGGGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR CCA 72 bp | CATAAAGGAGATGAAGGCTCTACTCGCTTAGTAAAATaGGTCATTTCTTCTGAGGTAGCACTACAGGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: HKGDEGSTRLVK*VISSEVALQVR Trigger: TCTAACCTGTAGTGCTACCTCAGAAGAAATGACCCATTTTACTAAGCGAGTAGAGCCTTCATCTCCTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR TCA 72 bp | AGCTTGACTCTGCAGAATGACAGTCATCTGCTATGCTaGTTACAGGACAAGGATTTAACCAGCTTTATTTCA | + |
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Preference number: 3 (lower is better) Translates to: SLTLQNDSHLLC*LQDKDLTSFIS Trigger: TGAAATAAAGCTGGTTAAATCCTTGTCCTGTAATCAGCATAGCAGATGACTGTCATTCTGCAGAGTCAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | AACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCGCAGCTCCCGGGCAATaGGGGTGGCCGATGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: NSSWKTVMNCLWGPRRHSAAPGQ*GWPMGA Trigger: GGCGCCCATCGGCCACCCTCATTGCCCGGGAGCTGC...GCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | CTTATACTTCCAGCAGTGCCACCTAGTTCCCTAGGGCCAGAGGTGACAGCAAGAAGACCAGAGAGGCCCTaGGTGCGGAGCAGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LILPAVPPSSLGPEVTARRPERP*VRSSSR Trigger: CCGGGAGCTGCTCCGCACTCAGGGCCTCTCTGGTCT...TCTTGCTGTCACCTCTGGCCCTAGGGAACTAGGTGGCACTGCTGGAAGTATAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | AACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCCAGCCCCTCGGTACATaGCCAGGAAGCCCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: NSSWKTVMNCLWGPRRHSQPLGT*PGSPQH Trigger: GTGCTGAGGGCTTCCTGGGCATGTACCGAGGGGCTG...GCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGAGAGGCCCTGAGTaGGGAGCAGCTCCCGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LEQQLEDSNELSVGPKKAQRGPE*GAAPGQ Trigger: TTGCCCGGGAGCTGCTCCGCACTCAGGGCCTCTCTG...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCATGTAGGGCCGGGAGGTaGGTGTGGCTGAGGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LEQQLEDSNELSVGPKKACRAGR*VWLRQK Trigger: CTTCTGCCTCAGCCACACCCACCTCCCGGCCCTACA...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCTTATGGGCGCCTGTGGGTaGAAGTCGAGCCAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QQLEDSNELSVGPKKAQLMGACG*KSSQCC Trigger: ACAGCACTGGCTCGACTTCCACCCACAGGCGCCCAT...AAGCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | TGTCTTACTGCACACGGTCCTGCCATAGTACATAAGAGGTTGGGGCTTCCGAACAATGAGGGTGGCCGATaGGCGCCTGTGGGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CLTAHGPAIVHKRLGLPNNEGGR*APVGGS Trigger: ACTTCCACCCACAGGCGCCCATCGGCCACCCTCATT...GTTCGGAAGCCCCAACCTCTTATGTACTATGGCAGGACCGTGTGCAGTAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | AACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCTGCTCAGGTCCTGGCTaGACATCCTGCAGGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: NSSWKTVMNCLWGPRRHSCSGPG*TSCRRS Trigger: TGATCGCCTGCAGGATGTCCAGCCAGGACCTGAGCA...GCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCAGAGATGCTCAGGTCCTaGCTGGACATCCTGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LEQQLEDSNELSVGPKKAEMLRS*LDILQA Trigger: CGCCTGCAGGATGTCCAGCCAGGACCTGAGCATCTC...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCAGCGTCCCATCTTGCATaGGCAGCTGCCGCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LEQQLEDSNELSVGPKKAASHLA*AAAARS Trigger: ACTTCTTGCGGCAGCTGCTCATGCAAGATGGGACGC...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCATCCTGGCACAGTCAGTaGCTCCGCTGTAGGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LEQQLEDSNELSVGPKKASWHSQ*LRCRCP Trigger: AGGACACCTACAGCGGAGTCACTGACTGTGCCAGGA...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | AACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCTCCTTTCATGAAGGCTaGTGGCCCCTCCTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NSSWKTVMNCLWGPRRHSSFHEG*WPLLCP Trigger: TGGACACAGGAGGGGCCAGCAGCCTTCATGAAAGGA...GCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | CTTATACTTCCAGCAGTGCCACCTAGTTCCCTAGGGCCAGAGGTGACAGCAAGACAGGTAATCACCACCTaGCATATTCCAGCCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LILPAVPPSSLGPEVTARQVITT*HIPAPH Trigger: GTGTGGGGCTGGAATATGCCAGGTGGTGATTACCTG...TCTTGCTGTCACCTCTGGCCCTAGGGAACTAGGTGGCACTGCTGGAAGTATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCTTTTTCATGAAGGCTGCTaGCCCCTCCTGTGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QQLEDSNELSVGPKKAQLFHEGC*PLLCPE Trigger: CTCTGGACACAGGAGGGGCCAGCAGCCTTCATGAAA...AAGCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | CTTATACTTCCAGCAGTGCCACCTAGTTCCCTAGGGCCAGAGGTGACAGCAAGATACACATCTTTCCCCTaGTGGTTCTGTAGTCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LILPAVPPSSLGPEVTARYTSFP*WFCSRV Trigger: GACCCGACTACAGAACCAGCAGGGGAAAGATGTGTA...TCTTGCTGTCACCTCTGGCCCTAGGGAACTAGGTGGCACTGCTGGAAGTATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | TGTCTTACTGCACACGGTCCTGCCATAGTACATAAGAGGTTGGGGCTTCCGAACCCACAGAACCTGCTGTaGAGCCTGCTACAAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: CLTAHGPAIVHKRLGLPNPQNLL*SLLQRS Trigger: ACTCCTTTGTAGCAGGCTGCACAGCAGGTTCTGTGG...GTTCGGAAGCCCCAACCTCTTATGTACTATGGCAGGACCGTGTGCAGTAAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACACCCCCACAAGACCTaGTATACCTCCATTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LEQQLEDSNELSVGPKKAHPHKT*YTSIDE Trigger: CTCATCAATGGAGGTATAGCAGGTCTTGTGGGGGTG...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCTTCAAGAAGTCATTGGCTaGCAGCTTGATTGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QQLEDSNELSVGPKKAQLQEVIG*QLDCLL Trigger: GAGAAGGCAATCAAGCTGGCAGCCAATGACTTCTTG...AAGCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | AAGAGGTTGGGGCTTCCGAACATCTCTGGTTCAGAAAGTTTAGTTTTCATAAAGGGAGGTGGGTGTGGCTaGGGCAGAAGCCTGATGACA | + |
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Preference number: 4 (lower is better) Translates to: KRLGLPNISGSESLVFIKGGGCG*GRSLMT Trigger: TGTCATCAGGCTTCTGCCTCAGCCACACCCACCTCC...CTTTATGAAAACTAAACTTTCTGAACCAGAGATGTTCGGAAGCCCCAACCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | CAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCTTCCTTTCTTGAGGGTCTaGATTCGAGTCTTCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: QQLEDSNELSVGPKKAQLPFLRV*IRVFRT Trigger: TGTTCTGAAGACTCGAATTCAGACCCTCAAGAAAGG...AAGCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | AAAGGAGATGAAGGCTCTACTCGCTTAGTAAAATGGGTCATTTCTTCTGAGGTAAGCCTGCTCCTTTCATaGAGGCTGCTGGCCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KGDEGSTRLVKWVISSEVSLLLS*RLLAPP Trigger: AGGAGGGGCCAGCAGCCTTCATGAAAGGAGCAGGCT...TACCTCAGAAGAAATGACCCATTTTACTAAGCGAGTAGAGCCTTCATCTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR GCA 90 bp | TGTCTTACTGCACACGGTCCTGCCATAGTACATAAGAGGTTGGGGCTTCCGAACGAGTTGGTTCAGGTTTaGAAACAAAGGGAAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: CLTAHGPAIVHKRLGLPNELVQV*KQREVD Trigger: ATCTACTTCCCTTTGTTTGCAAACCTGAACCAACTC...GTTCGGAAGCCCCAACCTCTTATGTACTATGGCAGGACCGTGTGCAGTAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| 3UTR CAA 72 bp | CTTACTGCACACGGTCCTGCCATAGTACATAAGAGGTaGGGGCTTCCGAACATCTCTGGTTCAGAAAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LTAHGPAIVHKR*GLPNISGSESL Trigger: TAAACTTTCTGAACCAGAGATGTTCGGAAGCCCCAACCTCTTATGTACTATGGCAGGACCGTGTGCAGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR TCA 90 bp | AACATCTCTGGTTCAGAAAGTTTAGTTTTCATAAAGGAGATGAAGGCTCTACTCCACCCAGGCCTTTCTTaGGGGTCTGAATTCGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NISGSESLVFIKEMKALLHPGLS*GSEFES Trigger: AGACTCGAATTCAGACCCTCAAGAAAGGCCTGGGTG...GAGTAGAGCCTTCATCTCCTTTATGAAAACTAAACTTTCTGAACCAGAGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 90 bp | GGGGGCTATGACCAGGGCACGGCAGCCTGCTCCTTTCATGAAGGCTaGTGGCCCCTCCTGTGTCCAGAGCTTCCTGGCACAGTCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: GGYDQGTAACSFHEG*WPLLCPELPGTVSD Trigger: GTCACTGACTGTGCCAGGAAGCTCTGGACACAGGAGGGGCCAGCAGCCTTCATGAAAGGAGCAGGCTGCCGTGCCCTGGTCATAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS CCA 90 bp | GGCTATGACCAGGGCACGGCAGCCTGCTCCTTTCATGAAGGCTGCTaGCCCCTCCTGTGTCCAGAGCTTCCTGGCACAGTCAGTGACTCC | + |
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Preference number: 5 (lower is better) Translates to: GYDQGTAACSFHEGC*PLLCPELPGTVSDS Trigger: GGAGTCACTGACTGTGCCAGGAAGCTCTGGACACAGGAGGGGCCAGCAGCCTTCATGAAAGGAGCAGGCTGCCGTGCCCTGGTCATAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 90 bp | ATTCCAGCCCCACACCCGGCCAGCATCTCCATCTTCAGGTTCCGCTaGGTCCCATCTTGCATGAGCAGCTGCCGCAAGAAGTCATTGGCT | + |
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Preference number: 5 (lower is better) Translates to: IPAPHPASISIFRFR*VPSCMSSCRKKSLA Trigger: AGCCAATGACTTCTTGCGGCAGCTGCTCATGCAAGATGGGACGCAGCGGAACCTGAAGATGGAGATGCTGGCCGGGTGTGGGGCTGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 90 bp | GCAGGTCACCCCCACAAGACCTGCTATACCTCCATTGATGAGTTTTaGGGAGATGCTCAGGTCCTGGCTGGACATCCTGCAGGCGATCAT | + |
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Preference number: 5 (lower is better) Translates to: AGHPHKTCYTSIDEF*GDAQVLAGHPAGDH Trigger: ATGATCGCCTGCAGGATGTCCAGCCAGGACCTGAGCATCTCCGCAAAACTCATCAATGGAGGTATAGCAGGTCTTGTGGGGGTGACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 90 bp | CTGCGTCCCATCTTGCATGAGCAGCTGCCGCAAGAAGTCATTGGCTaGCAGCTTGATTGCCTTCTCTGGAGTGACCAGGGTGAGGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: LRPILHEQLPQEVIG*QLDCLLWSDQGEVY Trigger: GTAAACCTCACCCTGGTCACTCCAGAGAAGGCAATCAAGCTGGCAGCCAATGACTTCTTGCGGCAGCTGCTCATGCAAGATGGGACGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CAA 90 bp | CTAGAACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCATTCTGTAGTCGGGTCTaGGCAAGGTCAATGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LEQQLEDSNELSVGPKKAFCSRV*ARSMGN Trigger: GTTTCCCATTGACCTTGCCAAGACCCGACTACAGAA...TGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS-3UTR CAA 90 bp | AACAGCAGTTGGAAGACAGTAATGAACTGTCTGTGGGGCCCAAGAAGGCACAGCCGAGTTGGTTCAGGTTaGCAAACAAAGGGAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: NSSWKTVMNCLWGPRRHSRVGSG*QTKGSR Trigger: TCTACTTCCCTTTGTTTGCAAACCTGAACCAACTCG...GCTGTGCCTTCTTGGGCCCCACAGACAGTTCATTACTGTCTTCCAACTGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | TGGCCGATGGGCGCCTGTGGGTGGAAGTCGAGCCAGTaGTGTAGGGCCGGGAGGTGGGTGTGGCTGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WPMGACGWKSSQ*CRAGRWVWLRQ Trigger: CTGCCTCAGCCACACCCACCTCCCGGCCCTACAGCACTGGCTCGACTTCCACCCACAGGCGCCCATCGGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | GACCAGGGCACGGCAGCCTGCTCCTTTCATGAAGGCTaGTGGCCCCTCCTGTGTCCAGAGCTTCCTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: DQGTAACSFHEG*WPLLCPELPGT Trigger: TGTGCCAGGAAGCTCTGGACACAGGAGGGGCCAGCAGCCTTCATGAAAGGAGCAGGCTGCCGTGCCCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS TCA 72 bp | GCCCCTCCTGTGTCCAGAGCTTCCTGGCACAGTCAGTaGCTCCGCTGTAGGTGTCCTCACCCAGGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: APPVSRASWHSQ*LRCRCPHPGLS Trigger: AGAAAGGCCTGGGTGAGGACACCTACAGCGGAGTCACTGACTGTGCCAGGAAGCTCTGGACACAGGAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | CCACACCCGGCCAGCATCTCCATCTTCAGGTTCCGCTaGGTCCCATCTTGCATGAGCAGCTGCCGCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PHPASISIFRFR*VPSCMSSCRKK Trigger: CTTCTTGCGGCAGCTGCTCATGCAAGATGGGACGCAGCGGAACCTGAAGATGGAGATGCTGGCCGGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | GACGGCTACCGCTGCCACAGAACCTGCTGTGCAGCCTaGTACAAAGGAGTGTGTGAAGGAGGCCTTGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: DGYRCHRTCCAA*YKGVCEGGLAG Trigger: ACCGGCAAGGCCTCCTTCACACACTCCTTTGTAGCAGGCTGCACAGCAGGTTCTGTGGCAGCGGTAGCCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS TCA 72 bp | GGGTCTGAATTCGAGTCTTCAGAACATCCAGAGGGGTaGCGGCTACCGCTGCCACAGAACCTGCTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSEFESSEHPEG*RLPLPQNLLCS Trigger: GCTGCACAGCAGGTTCTGTGGCAGCGGTAGCCGTCACCCCTCTGGATGTTCTGAAGACTCGAATTCAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | AGTCTTCAGAACATCCAGAGGGGTGACGGCTACCGCTaGCACAGAACCTGCTGTGCAGCCTGCTACAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLQNIQRGDGYR*HRTCCAACYKG Trigger: TCCTTTGTAGCAGGCTGCACAGCAGGTTCTGTGGCAGCGGTAGCCGTCACCCCTCTGGATGTTCTGAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS CAA 72 bp | CAGCATCTCCATCTTCAGGTTCCGCTGCGTCCCATCTaGCATGAGCAGCTGCCGCAAGAAGTCATTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QHLHLQVPLRPI*HEQLPQEVIGC Trigger: GCAGCCAATGACTTCTTGCGGCAGCTGCTCATGCAAGATGGGACGCAGCGGAACCTGAAGATGGAGATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS CAA 72 bp | ACGCAGGTCACCCCCACAAGACCTGCTATACCTCCATaGATGAGTTTTGCGGAGATGCTCAGGTCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TQVTPTRPAIPP*MSFAEMLRSWL Trigger: CAGCCAGGACCTGAGCATCTCCGCAAAACTCATCAATGGAGGTATAGCAGGTCTTGTGGGGGTGACCTGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | ATCTTGCATGAGCAGCTGCCGCAAGAAGTCATTGGCTaGCAGCTTGATTGCCTTCTCTGGAGTGACCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: ILHEQLPQEVIG*QLDCLLWSDQG Trigger: ACCCTGGTCACTCCAGAGAAGGCAATCAAGCTGGCAGCCAATGACTTCTTGCGGCAGCTGCTCATGCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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| CDS GCA 72 bp | AGGCAATCTGTCATTCCTCTGTACACATCTTTCCCCTaGTGGTTCTGTAGTCGGGTCTTGGCAAGGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: RQSVIPLYTSFP*WFCSRVLARSM Trigger: CATTGACCTTGCCAAGACCCGACTACAGAACCAGCAGGGGAAAGATGTGTACAGAGGAATGACAGATTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112682.4 |
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