Pregenerated sensors for SLC25A17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022404Ensembl transcript IDs: ENSMUST00000023040.9, ENSMUST00000230309.2, ENSMUST00000230983.2, ENSMUST00000231140.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGTAAAAATAGACAAAATTGGAGCAGCAGAGACTGGAAATAACTaGAAACCATCCTCGGTATGGTGCCAGGAGGCCTTCTTCCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: SVKIDKIGAAETGNN*KPSSVWCQEAFFLN Trigger: ATTAAGGAAGAAGGCCTCCTGGCACCATACCGAGGATGGTTTCCAGTTATTTCCAGTCTCTGCTGCTCCAATTTTGTCTATTTTTACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| 3UTR CCA 90 bp | TTAAAGCAGGAGGAAAAGAGTCAGATGGAAACAAAGTCATGCCCATaGCACAGTCATGATGTTATTCTCAGAGGAACTCTTTACCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LKQEEKSQMETKSCP*HSHDVILRGTLYQD Trigger: ATCTTGGTAAAGAGTTCCTCTGAGAATAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCCTCCTGCTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR TCA 90 bp | GGAAAAGAGTCAGATGGAAACAAAGTCATGCCCATGGCACAGTCATaGTGTTATTCTCAGAGGAACTCTTTACCAAGATTAAGACAAAAG | + |
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Preference number: 1 (lower is better) Translates to: GKESDGNKVMPMAQS*CYSQRNSLPRLRQK Trigger: CTTTTGTCTTAATCTTGGTAAAGAGTTCCTCTGAGAATAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTAGCTGGCTATACTCCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGACTGTCTGTGGTGTGGATaGGACCAACGGGAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GLAGYTPCLAFDAFTANDCLWCG*DQRERR Trigger: TCTCCTTTCCCGTTGGTCCCATCCACACCACAGACA...GTCATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGGAGTATAGCCAGCTAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR GCA 72 bp | ACCAACGGGAAAGGAGAACTGTTCCTCTTCTCCCTGTaGAGCACCTGCGTCTCCACACTGTCCTGTGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: TNGKGELFLFSL*STCVSTLSCGR Trigger: CCGCCCACAGGACAGTGTGGAGACGCAGGTGCTGCACAGGGAGAAGAGGAACAGTTCTCCTTTCCCGTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR CCA 72 bp | CCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGACTaGAATGTCTGTGGTGTGGATGGGACCAACGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: PCLAFDAFTAND*NVCGVDGTNGK Trigger: TTTCCCGTTGGTCCCATCCACACCACAGACATTCCAGTCATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR CCA 72 bp | ATAGACAAAATTGGAGCAGCAGAGACTGGAAATAACTaGAAACCATCCTCGGTATGGTGCCAGGAGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: IDKIGAAETGNN*KPSSVWCQEAF Trigger: GAAGGCCTCCTGGCACCATACCGAGGATGGTTTCCAGTTATTTCCAGTCTCTGCTGCTCCAATTTTGTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| 3UTR GCA 72 bp | AAGCAGGAGGAAAAGAGTCAGATGGAAACAAAGTCATaGCCATGGCACAGTCATGATGTTATTCTCAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KQEEKSQMETKS*PWHSHDVILRG Trigger: TCCTCTGAGAATAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCCTCCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR CCA 72 bp | GAGGAAAAGAGTCAGATGGAAACAAAGTCATGCCCATaGCACAGTCATGATGTTATTCTCAGAGGAACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EEKSQMETKSCP*HSHDVILRGTL Trigger: AAGAGTTCCTCTGAGAATAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR CCA 72 bp | TTCTCATCGACCATCATGCAGTACATCGTCCTAGTTTaGAAATCGATCACACGGAAGCATAGAGAGTACATT | + |
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Preference number: 3 (lower is better) Translates to: FSSTIMQYIVLV*KSITRKHREYI Trigger: AATGTACTCTCTATGCTTCCGTGTGATCGATTTCCAAACTAGGACGATGTACTGCATGATGGTCGATGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230983.2 |
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| 3UTR TCA 72 bp | TCAGATGGAAACAAAGTCATGCCCATGGCACAGTCATaGTGTTATTCTCAGAGGAACTCTTTACCAAGATTA | + |
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Preference number: 3 (lower is better) Translates to: SDGNKVMPMAQS*CYSQRNSLPRL Trigger: TAATCTTGGTAAAGAGTTCCTCTGAGAATAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| 3UTR-3UTR CAA 90 bp | GTCATGATGTTATTCTCAGAGGAACTCTTTACCAAGATTAAGACAAAAGCATCTGGAAAGTCCACCCCCTaGAGAAAAATGAATGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: VMMLFSEELFTKIKTKASGKSTP*RKMNEH Trigger: GTGTTCATTCATTTTTCTCAAGGGGGTGGACTTTCC...AGATGCTTTTGTCTTAATCTTGGTAAAGAGTTCCTCTGAGAATAACATCATGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CCA 90 bp | GAAAGGAGAACTGTTCCTCTTCTCCCTGTGCAGCACCTGCGTCTCCACACTGTCGGAAGAACACTGTCATaGCAGTCACACTTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: ERRTVPLLPVQHLRLHTVGRTLS*QSHFPR Trigger: CCGTGGGAAGTGTGACTGCCATGACAGTGTTCTTCC...GACAGTGTGGAGACGCAGGTGCTGCACAGGGAGAAGAGGAACAGTTCTCCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CCA 90 bp | ACCAACGGGAAAGGAGAACTGTTCCTCTTCTCCCTGTGCAGCACCTGCGTCTCCCAGGGTCCTGTTTTCTaGGTTCAGTCTATGACGTCC | + |
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Preference number: 4 (lower is better) Translates to: TNGKGELFLFSLCSTCVSQGPVF*VQSMTS Trigger: GGACGTCATAGACTGAACCCAGAAAACAGGACCCTG...GGAGACGCAGGTGCTGCACAGGGAGAAGAGGAACAGTTCTCCTTTCCCGTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | CTTAGCTTCCAGGCCTTTGTAGAGTCCCATTATTCCAAAGCGCTTGACTCGCTGCCATCCTCGGTATGGTaGCAGGAGGCCTTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSFQAFVESHYSKALDSLPSSVW*QEAFFL Trigger: AAGGAAGAAGGCCTCCTGGCACCATACCGAGGATGG...CAGCGAGTCAAGCGCTTTGGAATAATGGGACTCTACAAAGGCCTGGAAGCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR CCA 90 bp | GGCTTAGCTGGCTATACTCCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGACCCTGCAGCTTCAGTCTaGTGTTTACCACCCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLAGYTPCLAFDAFTANDPAASV*CLPPRA Trigger: CGCTCTGGGTGGTAAACACCAGACTGAAGCTGCAGG...GTCATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGGAGTATAGCCAGCTAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR TCA 90 bp | GAACATGAGGGCGGCTGTGAGCACTGTCTGCAGCAGCTTAGCTTCCAGGCCTTTTGCATGCGTCGTTTTTaGCTTTCTTTTCTCATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: EHEGGCEHCLQQLSFQAFCMRRF*LSFLID Trigger: GTCGATGAGAAAAGAAAGTCAAAAACGACGCATGCA...AAAGGCCTGGAAGCTAAGCTGCTGCAGACAGTGCTCACAGCCGCCCTCATGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR TCA 90 bp | TTCCAGGCCTTTGTAGAGTCCCATTATTCCAAAGCGCTTGACTCGCTGGTGAAGTCTGCATGGGATAGGTaGCTGTGGTGGCAATCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQAFVESHYSKALDSLVKSAWDR*LWWQSL Trigger: AAGCGATTGCCACCACAGTCACCTATCCCATGCAGA...CTTCACCAGCGAGTCAAGCGCTTTGGAATAATGGGACTCTACAAAGGCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR CCA 90 bp | CTTAGCTTCCAGGCCTTTGTAGAGTCCCATTATTCCAAAGCGCTTGACTCGCTGGGAAGAACACTGTCATaGCAGTCACACTTCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFQAFVESHYSKALDSLGRTLS*QSHFPR Trigger: CCGTGGGAAGTGTGACTGCCATGACAGTGTTCTTCC...CAGCGAGTCAAGCGCTTTGGAATAATGGGACTCTACAAAGGCCTGGAAGCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR CCA 90 bp | TCCCATTATTCCAAAGCGCTTGACTCGCTGGTGAAGAAGAGAGAGAACATTCCGCCTGCAGCTTCAGTCTaGTGTTTACCACCCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SHYSKALDSLVKKRENIPPAASV*CLPPRA Trigger: CGCTCTGGGTGGTAAACACCAGACTGAAGCTGCAGG...CGGAATGTTCTCTCTCTTCTTCACCAGCGAGTCAAGCGCTTTGGAATAATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR TCA 90 bp | GAAAGGAGAACTGTTCCTCTTCTCCCTGTGCAGCACCTGCGTCTCCACACTGTCTGCATGCGTCGTTTTTaGCTTTCTTTTCTCATCGAC | + |
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Preference number: 4 (lower is better) Translates to: ERRTVPLLPVQHLRLHTVCMRRF*LSFLID Trigger: GTCGATGAGAAAAGAAAGTCAAAAACGACGCATGCA...GACAGTGTGGAGACGCAGGTGCTGCACAGGGAGAAGAGGAACAGTTCTCCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | AAAGCAGGAGGAAAAGAGTCAGATGGAAACAAAGTCATGCCCATGGCACAGTCAGCAAGGAGGGGAAGGTaGCATTCCACAGAGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KAGGKESDGNKVMPMAQSARRGR*HSTEPR Trigger: TCTTGGCTCTGTGGAATGGCACCTTCCCCTCCTTGC...TGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCCTCCTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | GGAAAGGAGAACTGTTCCTCTTCTCCCTGTGCAGCACCTGCGTCTCCACACTGTAATCGCTTTGGCTATTaGGCCAATGATGAACACATC | + |
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Preference number: 4 (lower is better) Translates to: GKENCSSSPCAAPASPHCNRFGY*ANDEHI Trigger: GATGTGTTCATCATTGGCGCAATAGCCAAAGCGATT...ACAGTGTGGAGACGCAGGTGCTGCACAGGGAGAAGAGGAACAGTTCTCCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | TACACAAGGAACATGAGGGCGGCTGTGAGCACTGTCTGCAGCAGCTTAGCTTCCACCTTTGACCCACACTaGTTTGAGGCTATTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: YTRNMRAAVSTVCSSLASTFDPH*FEAIKS Trigger: ACTTTTAATAGCCTCAAAGCAGTGTGGGTCAAAGGT...GGAAGCTAAGCTGCTGCAGACAGTGCTCACAGCCGCCCTCATGTTCCTTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR CCA 90 bp | GAGTCCCATTATTCCAAAGCGCTTGACTCGCTGGTGAAGAAGAGAGAGAACATTAAACCATCCTCGGTATaGTGCCAGGAGGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ESHYSKALDSLVKKRENIKPSSV*CQEAFF Trigger: GAAGAAGGCCTCCTGGCACCATACCGAGGATGGTTT...AATGTTCTCTCTCTTCTTCACCAGCGAGTCAAGCGCTTTGGAATAATGGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR TCA 90 bp | TATACTCCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGACTGGAATGTCTGTTCTGCATGGGATAGGTaGCTGTGGTGGCAATCGCTT | + |
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Preference number: 4 (lower is better) Translates to: YTPCLAFDAFTANDWNVCSAWDR*LWWQSL Trigger: AAGCGATTGCCACCACAGTCACCTATCCCATGCAGA...ACAGACATTCCAGTCATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CCA 90 bp | TATACTCCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGACTGGAATGTCTGTAAACCATCCTCGGTATaGTGCCAGGAGGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YTPCLAFDAFTANDWNVCKPSSV*CQEAFF Trigger: GAAGAAGGCCTCCTGGCACCATACCGAGGATGGTTT...ACAGACATTCCAGTCATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | CTTATGTGTGCTCTTCAAGCCCATTACGGTGAAGGTAGCAGCTGTCAGTTTCTCTTCATTCCGAAATTTTaGCCCCTGCAGCTTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LMCALQAHYGEGSSCQFLFIPKF*PLQLQS Trigger: AGACTGAAGCTGCAGGGGGCAAAATTTCGGAATGAA...GAGAAACTGACAGCTGCTACCTTCACCGTAATGGGCTTGAAGAGCACACATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR GCA 90 bp | CCCAACCACGAGATCTTTTCCTGTAGAAGAACGCTGACCTTTGACCCACACTGCTCCTGTAGTTTGTTATaGTGTGTTTGGTTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: PNHEIFSCRRTLTFDPHCSCSLL*CVWLMS Trigger: GGACATCAACCAAACACAGCATAACAAACTACAGGA...GCAGTGTGGGTCAAAGGTCAGCGTTCTTCTACAGGAAAAGATCTCGTGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTAGCTGGCTATACTCCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGAGACTGGAAATAACTaGAAACCATCCTCGGTATGG | + |
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Preference number: 4 (lower is better) Translates to: TGLAGYTPCLAFDAFTANETGNN*KPSSVW Trigger: CCATACCGAGGATGGTTTCCAGTTATTTCCAGTCTC...ATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGGAGTATAGCCAGCTAAGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CCA 90 bp | GAGATCTTTTCCTGTAGAAGAACGCTGACCTTTGACCCACACTGCTTTGAGGCTTTGTTATGCTGTGTTTaGTTGATGTCCCTGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: EIFSCRRTLTFDPHCFEALLCCV*LMSLRG Trigger: CCCTCTCAGGGACATCAACCAAACACAGCATAACAA...AGCCTCAAAGCAGTGTGGGTCAAAGGTCAGCGTTCTTCTACAGGAAAAGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS-3UTR TCA 90 bp | AAACAAGTGGCAAAGTTGAGAAAAGCTTTCAATGGAAAGTCCACCCCCTTGAGATCCAAACCTCAGAATTaGCTGTACCGTCTGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: KQVAKLRKAFNGKSTPLRSKPQN*LYRLHG Trigger: CCCATGCAGACGGTACAGTCAATTCTGAGGTTTGGA...TCTCAAGGGGGTGGACTTTCCATTGAAAGCTTTTCTCAACTTTGCCACTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | GAGTCCCATTATTCCAAAGCGCTTGACTCGCTGGTGAAGAAGAGAGAGAACATTAATCGCTTTGGCTATTaGGCCAATGATGAACACATC | + |
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Preference number: 4 (lower is better) Translates to: ESHYSKALDSLVKKRENINRFGY*ANDEHI Trigger: GATGTGTTCATCATTGGCGCAATAGCCAAAGCGATT...AATGTTCTCTCTCTTCTTCACCAGCGAGTCAAGCGCTTTGGAATAATGGGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR GCA 90 bp | GTCATGATGTTATTCTCAGAGGAACTCTTTACCAAGATTAAGACAAAAGCATCTCCATCCTCGGTATGGTaGCAGGAGGCCTTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VMMLFSEELFTKIKTKASPSSVW*QEAFFL Trigger: AAGGAAGAAGGCCTCCTGGCACCATACCGAGGATGG...AGATGCTTTTGTCTTAATCTTGGTAAAGAGTTCCTCTGAGAATAACATCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTAGCTGGCTATACTCCCTGCTTAGCCTTTGATGCCTTTACAGCCAATGCCTTTGTAGTTAGTTaGTATAATGTCTTCATTCCG | + |
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Preference number: 4 (lower is better) Translates to: TGLAGYTPCLAFDAFTANAFVVS*YNVFIP Trigger: CGGAATGAAGACATTATACCAACTAACTACAAAGGC...ATTGGCTGTAAAGGCATCAAAGGCTAAGCAGGGAGTATAGCCAGCTAAGCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR TCA 90 bp | AGGAACTCTTTACCAAGATTAAGACAAAAGCATCTGAGGAGAATTATGGTACTGCGCTTGACTCGCTGGTaGAGAAGAGAGAGAACATTC | + |
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Preference number: 4 (lower is better) Translates to: RNSLPRLRQKHLRRIMVLRLTRW*RRERTF Trigger: GAATGTTCTCTCTCTTCTTCACCAGCGAGTCAAGCG...CAGTACCATAATTCTCCTCAGATGCTTTTGTCTTAATCTTGGTAAAGAGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | AAGCATCTGAGGAGAATTATGGTACTGAATCGTCTAGAACCTGGGAGAGAATTTTTCATTCCGAAATTTTaGCCCCTGCAGCTTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: KHLRRIMVLNRLEPGREFFIPKF*PLQLQS Trigger: AGACTGAAGCTGCAGGGGGCAAAATTTCGGAATGAA...AAATTCTCTCCCAGGTTCTAGACGATTCAGTACCATAATTCTCCTCAGATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCTTAATTATCTCCAGGAGCACTGCATGCGTCGTTTTTGACTTTCTTTTCGCCTTTTCTAATAACTaGCTGAAGCCGAAGTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: SSLIISRSTACVVFDFLFAFSNN*LKPKSS Trigger: GCTAGACTTCGGCTTCAGGCAGTTATTAGAAAAGGC...GAAAAGAAAGTCAAAAACGACGCATGCAGTGCTCCTGGAGATAATTAAGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230983.2 |
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| CDS-3UTR CCA 90 bp | TTTGTAGAGTCCCATTATTCCAAAGCGCTTGACTCGCTGGTGAAGAAGAGAGAGGCCTTTGTAGTTAGTTaGTATAATGTCTTCATTCCG | + |
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Preference number: 4 (lower is better) Translates to: FVESHYSKALDSLVKKREAFVVS*YNVFIP Trigger: CGGAATGAAGACATTATACCAACTAACTACAAAGGC...CTCTCTCTTCTTCACCAGCGAGTCAAGCGCTTTGGAATAATGGGACTCTACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR GCA 90 bp | AGGAAAAGAGTCAGATGGAAACAAAGTCATGCCCATGGCACAGTCATGATGTTAACCTTTGACCCACACTaGTTTGAGGCTATTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RKRVRWKQSHAHGTVMMLTFDPH*FEAIKS Trigger: ACTTTTAATAGCCTCAAAGCAGTGTGGGTCAAAGGT...TAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR GCA 90 bp | TCTCAGAGGAACTCTTTACCAAGATTAAGACAAAAGCATCTGAGGAGAATTATGCGAAATTTTGCCCCCTaGAGCTTCAGTCTGGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: SQRNSLPRLRQKHLRRIMRNFAP*SFSLVF Trigger: AAACACCAGACTGAAGCTGCAGGGGGCAAAATTTCG...CATAATTCTCCTCAGATGCTTTTGTCTTAATCTTGGTAAAGAGTTCCTCTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CAA 90 bp | GAACATGAGGGCGGCTGTGAGCACTGTCTGCAGCAGCTTAGCTTCCAGGCCTTTGTGGTGGCAATCGCTTaGGCTATTGCGCCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: EHEGGCEHCLQQLSFQAFVVAIA*AIAPMM Trigger: CATCATTGGCGCAATAGCCAAAGCGATTGCCACCAC...AAAGGCCTGGAAGCTAAGCTGCTGCAGACAGTGCTCACAGCCGCCCTCATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR CAA 90 bp | CATCCTCGGTATGGTGCCAGGAGGCCTTCTTCCTTAATTATCTCCAGGAGCACTTTATGCTGTGTTTGGTaGATGTCCCTGAGAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HPRYGARRPSSLIISRSTLCCVW*MSLRGL Trigger: CAGCCCTCTCAGGGACATCAACCAAACACAGCATAA...AGTGCTCCTGGAGATAATTAAGGAAGAAGGCCTCCTGGCACCATACCGAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS GCA 90 bp | CGTCTGCATGGGATAGGTGACTGTGGTGGCAATCGCTTTGGCTATTaGGCCAATGATGAACACATCCAGAGAAGAGAGCTTCATCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: RLHGIGDCGGNRFGY*ANDEHIQRRELHPF Trigger: AAACGGATGAAGCTCTCTTCTCTGGATGTGTTCATCATTGGCGCAATAGCCAAAGCGATTGCCACCACAGTCACCTATCCCATGCAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS CCA 90 bp | CACTGTCATGGCAGTCACACTTCCTGTAGTTTGTTATGCTGTGTTTaGTTGATGTCCCTGAGAGGGCTGAGATGTTCTTCTCGGTCACGG | + |
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Preference number: 5 (lower is better) Translates to: HCHGSHTSCSLLCCV*LMSLRGLRCSSRSR Trigger: CCGTGACCGAGAAGAACATCTCAGCCCTCTCAGGGACATCAACCAAACACAGCATAACAAACTACAGGAAGTGTGACTGCCATGACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS-3UTR CAA 90 bp | CAGGCCTTTGTAGAGTCCCATTATTCCAAAGCGCTTGACTCGCTGGTGAAGAAGGTCCAAACCTCAGAATaGACTGTACCGTCTGCATGG | + |
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Preference number: 5 (lower is better) Translates to: QAFVESHYSKALDSLVKKVQTSE*TVPSAW Trigger: CCATGCAGACGGTACAGTCAATTCTGAGGTTTGGAC...CTTCTTCACCAGCGAGTCAAGCGCTTTGGAATAATGGGACTCTACAAAGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS-3UTR CAA 90 bp | TGGTGCCAGGAGGCCTTCTTCCTTAATTATCTCCAGGAGCACTGCATGCGTCGTCACACTTCCTGTAGTTaGTTATGCTGTGTTTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: WCQEAFFLNYLQEHCMRRHTSCS*LCCVWL Trigger: CAACCAAACACAGCATAACAAACTACAGGAAGTGTG...ACGACGCATGCAGTGCTCCTGGAGATAATTAAGGAAGAAGGCCTCCTGGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS-3UTR CAA 90 bp | AGGAAAAGAGTCAGATGGAAACAAAGTCATGCCCATGGCACAGTCATGATGTTAGTGGTGGCAATCGCTTaGGCTATTGCGCCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: RKRVRWKQSHAHGTVMMLVVAIA*AIAPMM Trigger: CATCATTGGCGCAATAGCCAAAGCGATTGCCACCAC...TAACATCATGACTGTGCCATGGGCATGACTTTGTTTCCATCTGACTCTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS TCA 90 bp | GCCTTCTTCCTTAATTATCTCCAGGAGCACTGCATGCGTCGTTTTTaGCTTTCTTTTCTCATCGACCTGAAGCCGAAGTCTAGCAGTATC | + |
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Preference number: 5 (lower is better) Translates to: AFFLNYLQEHCMRRF*LSFLIDLKPKSSSI Trigger: GATACTGCTAGACTTCGGCTTCAGGTCGATGAGAAAAGAAAGTCAAAAACGACGCATGCAGTGCTCCTGGAGATAATTAAGGAAGAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023040.9 ENSMUST00000231140.2 |
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| CDS GCA 90 bp | AATGCCTTTGTAGTTAGTTGGTATAATGTCTTCATTCCGAAATTTTaGCCCCTGCAGCTTCAGTCTGGTGTTTACCACCCAGAGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: NAFVVSWYNVFIPKF*PLQLQSGVYHPERS Trigger: ACTCCGCTCTGGGTGGTAAACACCAGACTGAAGCTGCAGGGGGCAAAATTTCGGAATGAAGACATTATACCAACTAACTACAAAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023040.9 ENSMUST00000231140.2 |
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| CDS-3UTR CAA 90 bp | ACAAAAGCATCTGAGGAGAATTATGGTACTGAATCGTCTAGAACCTGGGAGAGAGTCCAAACCTCAGAATaGACTGTACCGTCTGCATGG | + |
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Preference number: 5 (lower is better) Translates to: TKASEENYGTESSRTWERVQTSE*TVPSAW Trigger: CCATGCAGACGGTACAGTCAATTCTGAGGTTTGGAC...TCTCTCCCAGGTTCTAGACGATTCAGTACCATAATTCTCCTCAGATGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS-3UTR CAA 90 bp | AACCACGAGATCTTTTCCTGTAGAAGAACGCTGACCTTTGACCCACACTGCTTTTTTGTTATGCTGTGTTaGGTTGATGTCCCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: NHEIFSCRRTLTFDPHCFFVMLC*VDVPER Trigger: CCTCTCAGGGACATCAACCAAACACAGCATAACAAA...AAAGCAGTGTGGGTCAAAGGTCAGCGTTCTTCTACAGGAAAAGATCTCGTGGTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS CCA 90 bp | ATGAACACATCCAGAGAAGAGAGCGATAATGCCTTTGTAGTTAGTTaGTATAATGTCTTCATTCCGAAATTTTGCCCCCTGCAGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: MNTSREESDNAFVVS*YNVFIPKFCPLQLQ Trigger: CTGAAGCTGCAGGGGGCAAAATTTCGGAATGAAGACATTATACCAACTAACTACAAAGGCATTATCGCTCTCTTCTCTGGATGTGTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS CCA 90 bp | TCGAATAATCTGGTGGAATGCATCGATAATGCCTTTGTAGTTAGTTaGTATAATGTCTTCATTCCGAAATTTTGCCCCCTGCAGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SNNLVECIDNAFVVS*YNVFIPKFCPLQLQ Trigger: CTGAAGCTGCAGGGGGCAAAATTTCGGAATGAAGACATTATACCAACTAACTACAAAGGCATTATCGATGCATTCCACCAGATTATTCGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS GCA 90 bp | ATTCCACAGAGCCAAGATCCCTTCATCTCGAATAATCTGGTGGAATaGATCGATAATGCCTTTGTAGTTAGTTGGTATAATGTCTTCATT | + |
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Preference number: 5 (lower is better) Translates to: IPQSQDPFISNNLVE*IDNAFVVSWYNVFI Trigger: AATGAAGACATTATACCAACTAACTACAAAGGCATTATCGATGCATTCCACCAGATTATTCGAGATGAAGGGATCTTGGCTCTGTGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS GCA 72 bp | CCAGAGCGGAGTCGTCAGCAGCACATTCACCACTCCTaGTACAAACCCAACCACGAGATCTTTTCCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PERSRQQHIHHS*YKPNHEIFSCR Trigger: TCTACAGGAAAAGATCTCGTGGTTGGGTTTGTAGCAGGAGTGGTGAATGTGCTGCTGACGACTCCGCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023040.9 ENSMUST00000231140.2 |
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| CDS TCA 72 bp | ACCTCAGAATTGACTGTACCGTCTGCATGGGATAGGTaGCTGTGGTGGCAATCGCTTTGGCTATTGCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: TSELTVPSAWDR*LWWQSLWLLRQ Trigger: TTGGCGCAATAGCCAAAGCGATTGCCACCACAGTCACCTATCCCATGCAGACGGTACAGTCAATTCTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023040.9 ENSMUST00000231140.2 |
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| CDS GCA 72 bp | GGGATAGGTGACTGTGGTGGCAATCGCTTTGGCTATTaGGCCAATGATGAACACATCCAGAGAAGAGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GIGDCGGNRFGY*ANDEHIQRRER Trigger: TCGCTCTCTTCTCTGGATGTGTTCATCATTGGCGCAATAGCCAAAGCGATTGCCACCACAGTCACCTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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| CDS CAA 90 bp | TGTCATGGCAGTCACACTTCCTGTAGTTTGTTATGCTGTGTTTGGTaGATGTCCCTGAGAGGGCTGAGATGTTCTTCTCGGTCACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CHGSHTSCSLLCCVW*MSLRGLRCSSRSRL Trigger: GAGCCGTGACCGAGAAGAACATCTCAGCCCTCTCAGGGACATCAACCAAACACAGCATAACAAACTACAGGAAGTGTGACTGCCATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS GCA 72 bp | GGGATAGGTGACTGTGGTGGCAATCGCTTTGGCTATTaGGCCAATGATGAACACATCCAGAGAAGAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GIGDCGGNRFGY*ANDEHIQRREL Trigger: AAGCTCTCTTCTCTGGATGTGTTCATCATTGGCGCAATAGCCAAAGCGATTGCCACCACAGTCACCTATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023040.9 |
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| CDS GCA 72 bp | GTTGGTATAATGTCTTCATTCCGAAATTTTGCCCCCTaGAGCTTCAGTCTGGTGTTTACCACCCAGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: VGIMSSFRNFAP*SFSLVFTTQSG Trigger: TCCGCTCTGGGTGGTAAACACCAGACTGAAGCTGCAGGGGGCAAAATTTCGGAATGAAGACATTATACCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023040.9 ENSMUST00000231140.2 |
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| CDS CCA 72 bp | GGCAGTCACACTTCCTGTAGTTTGTTATGCTGTGTTTaGTTGATGTCCCTGAGAGGGCTGAGATGTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSHTSCSLLCCV*LMSLRGLRCSS Trigger: AGAAGAACATCTCAGCCCTCTCAGGGACATCAACCAAACACAGCATAACAAACTACAGGAAGTGTGACTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230309.2 |
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| CDS TCA 72 bp | CTTAATTATCTCCAGGAGCACTGCATGCGTCGTTTTTaGCTTTCTTTTCTCATCGACCTGAAGCCGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LNYLQEHCMRRF*LSFLIDLKPKS Trigger: AGACTTCGGCTTCAGGTCGATGAGAAAAGAAAGTCAAAAACGACGCATGCAGTGCTCCTGGAGATAATTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023040.9 ENSMUST00000231140.2 |
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| CDS CCA 72 bp | TCCAGAGAAGAGAGCGATAATGCCTTTGTAGTTAGTTaGTATAATGTCTTCATTCCGAAATTTTGCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SREESDNAFVVS*YNVFIPKFCPL Trigger: CAGGGGGCAAAATTTCGGAATGAAGACATTATACCAACTAACTACAAAGGCATTATCGCTCTCTTCTCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231140.2 |
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