Pregenerated sensors for SLC25A15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031482Ensembl transcript IDs: ENSMUST00000033871.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGTGGTAAGGTCAACCTACCTCCTTCAGCCTTACAGGCAGAGTaGGAACAGCGCCCACTACCATCCCCCTGGTCTTGGAGCAGTACA | + |
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Preference number: 1 (lower is better) Translates to: HCGKVNLPPSALQAE*EQRPLPSPWSWSST Trigger: TGTACTGCTCCAAGACCAGGGGGATGGTAGTGGGCGCTGTTCCCACTCTGCCTGTAAGGCTGAAGGAGGTAGGTTGACCTTACCACAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 90 bp | AAGGTGCACCCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTaGTTTTCAAGAGAGCAGGGCAGGGCAGTCCCTGTCTTTCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KVHPGFLLRAGKNLC*FSREQGRAVPVFQE Trigger: CTCCTGAAAGACAGGGACTGCCCTGCCCTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGGGTGCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 90 bp | CAGTGGGCTCAGAGTGGCCTCAGATCCAGTACCAAAGGTGCACCCTaGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTGGTTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: QWAQSGLRSSTKGAP*IPAESRQEPLLVFK Trigger: CTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGGGTGCACCTTTGGTACTGGATCTGAGGCCACTCTGAGCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR GCA 90 bp | CCCAGGCACCTAGAAGGGAAAGAGCTTGGCTTTGAACAGTCTTCCTaGAGGAAGCCAACCCTACATTTGCCTCAATTCAGATCAGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: PRHLEGKELGFEQSS*RKPTLHLPQFRSVQ Trigger: CTGAACTGATCTGAATTGAGGCAAATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTTTCCCTTCTAGGTGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR TCA 90 bp | ATAATTGCATGTGTACCACTGACTTCCACTGAATTTGTCCTGAAATaGAGGCAGTCTGCACGAGGCTGGTGCATAAGGCTAGTGTATAAG | + |
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Preference number: 1 (lower is better) Translates to: IIACVPLTSTEFVLK*RQSARGWCIRLVYK Trigger: CTTATACACTAGCCTTATGCACCAGCCTCGTGCAGACTGCCTTCATTTCAGGACAAATTCAGTGGAAGTCAGTGGTACACATGCAATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 90 bp | GTGTATAAGGCCACCAGTTCCCCTGTATACTCACTCTACCAAGGGTaGACTTTTCTGTTTGGGTTCAATAACAGGCAGAAATTATACTGT | + |
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Preference number: 1 (lower is better) Translates to: VYKATSSPVYSLYQG*TFLFGFNNRQKLYC Trigger: ACAGTATAATTTCTGCCTGTTATTGAACCCAAACAGAAAAGTCCACCCTTGGTAGAGTGAGTATACAGGGGAACTGGTGGCCTTATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 90 bp | AAACAGGTCCATTCCCTAGTGATTAAACATCCAAATATGAGACTATaGCCACATTTTCATTCAAACCACCACATGGGTGGAGGCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: KQVHSLVIKHPNMRL*PHFHSNHHMGGGRA Trigger: TGCTCTGCCTCCACCCATGTGGTGGTTTGAATGAAAATGTGGCCATAGTCTCATATTTGGATGTTTAATCACTAGGGAATGGACCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR TCA 90 bp | TGTCAACTTCCCTGCAGTCAAATTATTTTATACCAGGAATCTAGCTaGCAGAAAGAACACTTGTTCCAATACAACCACCACCTTGAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: CQLPCSQIILYQESS*QKEHLFQYNHHLEE Trigger: TTCTTCAAGGTGGTGGTTGTATTGGAACAAGTGTTCTTTCTGTCAGCTAGATTCCTGGTATAAAATAATTTGACTGCAGGGAAGTTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTGGTTTTCAAGAGAGCAGGGAGGAAGCTCTGAGTaGGGAGGCGGTGTGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PGFLLRAGKNLCWFSREQGGSSE*GGGVSS Trigger: AGAGGACACACCGCCTCCTCACTCAGAGCTTCCTCC...CTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGATCAAGGAATCATGGACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGACCCTGGATTCCTGCTaGGAGCAGGCAAGAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: EADQGIMDPKVSFRKGTQTLDSC*EQARTS Trigger: AGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGGGT...CTGGGTACCCTTTCTGAAGCTCACTTTTGGGTCCATGATTCCTTGATCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAAAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTCCTGAAACCCTGAGTTaGCCAGTCACTAAACGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KGKSLALNSLPAGSQPYIPETLS*PVTKRL Trigger: CAGGCGTTTAGTGACTGGTCAACTCAGGGTTTCAGG...AATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTTTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTTGCCTCGAATTTGTCCTGAAATaGAGGCAGTCTGCACGAGGC | + |
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Preference number: 2 (lower is better) Translates to: KSLALNSLPAGSQPYICLEFVLK*RQSARG Trigger: GCCTCGTGCAGACTGCCTTCATTTCAGGACAAATTC...GAGGCAAATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGTTAACGGGCTCCTTCGGATGTCCACTGAATTTGTCCTaGAATGAAGGCAGTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: DPKVSFRKGTQLTGSFGCPLNLS*NEGSLH Trigger: GTGCAGACTGCCTTCATTTCAGGACAAATTCAGTGG...ACATCCGAAGGAGCCCGTTAACTGGGTACCCTTTCTGAAGCTCACTTTTGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTGGTTTTCAAGAGAGCAGTACCAGAGGGTAGAATaGGAAGCCCACCTAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PGFLLRAGKNLCWFSREQYQRVE*EAHLED Trigger: ATCTTCTAGGTGGGCTTCTCATTCTACCCTCTGGTA...CTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGCAGGAAGCCAACCCTACATTTGCCTCAATTCAGATCAGTTCAGATGAAAGGGCGTCTGATTGGTaGGACACAGTGGGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FLQEANPTFASIQISSDERASDW*DTVGSE Trigger: CTCTGAGCCCACTGTGTCTCACCAATCAGACGCCCT...TTCATCTGAACTGATCTGAATTGAGGCAAATGTAGGGTTGGCTTCCTGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGTTAACGGGCTCCTTCGGATGTTTGCATGTGTACCACTaGCTTCCACTGAATTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: DPKVSFRKGTQLTGSFGCLHVYH*LPLNLS Trigger: GGACAAATTCAGTGGAAGTCAGTGGTACACATGCAA...ACATCCGAAGGAGCCCGTTAACTGGGTACCCTTTCTGAAGCTCACTTTTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTTGCCTCGCAGTACAGACAATGTaGCTGATCTCTATGGCGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KSLALNSLPAGSQPYICLAVQTM*LISMAR Trigger: TCTCGCCATAGAGATCAGGCACATTGTCTGTACTGC...GAGGCAAATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCAAGGAATCATGGACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGGGCAAGAACCTCTGTTaGTTTTCAAGAGAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EADQGIMDPKVSFRKGTQGKNLC*FSREQG Trigger: GCCCTGCTCTCTTGAAAACCAACAGAGGTTCTTGCC...CTGGGTACCCTTTCTGAAGCTCACTTTTGGGTCCATGATTCCTTGATCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAAAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTTCACTCTACCAAGGGTaGACTTTTCTGTTTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: KGKSLALNSLPAGSQPYISLYQG*TFLFGF Trigger: GAACCCAAACAGAAAAGTCCACCCTTGGTAGAGTGA...AATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTTTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR TCA 90 bp | GAACACTTGTTCCAATACAACCACCACCTTGAAGAATTATTATCCATAACTCTTACTAAACGCCTGCCTTaGATCCAGGCACACCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: EHLFQYNHHLEELLSITLTKRLP*IQAHQD Trigger: GTCCTGGTGTGCCTGGATTCAAGGCAGGCGTTTAGT...AAGAGTTATGGATAATAATTCTTCAAGGTGGTGGTTGTATTGGAACAAGTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGAAACTTCATCAAGAACGTAGAAGCCACACAACTATGCATATAGGTTTTGAAATGAAGGCAGTCTaGACGAGGCTGGTGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: TLKLHQERRSHTTMHIGFEMKAV*TRLVHK Trigger: CTTATGCACCAGCCTCGTGCAGACTGCCTTCATTTC...AAAACCTATATGCATAGTTGTGTGGCTTCTACGTTCTTGATGAAGTTTCAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 72 bp | AAGGTCAACCTACCTCCTTCAGCCTTACAGGCAGAGTaGGAACAGCGCCCACTACCATCCCCCTGGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: KVNLPPSALQAE*EQRPLPSPWSW Trigger: CCAAGACCAGGGGGATGGTAGTGGGCGCTGTTCCCACTCTGCCTGTAAGGCTGAAGGAGGTAGGTTGACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 72 bp | CCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTaGTTTTCAAGAGAGCAGGGCAGGGCAGTCCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: PGFLLRAGKNLC*FSREQGRAVPV Trigger: GACAGGGACTGCCCTGCCCTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 72 bp | CAGAGTGGCCTCAGATCCAGTACCAAAGGTGCACCCTaGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: QSGLRSSTKGAP*IPAESRQEPLL Trigger: CAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGGGTGCACCTTTGGTACTGGATCTGAGGCCACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 72 bp | TGCTTCCTGAAAGGGCGTCTGATTGGTGAGACACAGTaGGCTCAGAGTGGCCTCAGATCCAGTACCAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: CFLKGRLIGETQ*AQSGLRSSTKG Trigger: ACCTTTGGTACTGGATCTGAGGCCACTCTGAGCCCACTGTGTCTCACCAATCAGACGCCCTTTCAGGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR TCA 72 bp | ATCCCCCTGGTCTTGGAGCAGTACAGACAATGTGCCTaGTCTCTATGGCGAGAAGACCCCACAGCCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: IPLVLEQYRQCA*SLWREDPTAKE Trigger: TTCTTTGGCTGTGGGGTCTTCTCGCCATAGAGATCAGGCACATTGTCTGTACTGCTCCAAGACCAGGGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR TCA 72 bp | CAGATCCAGTACCAAAGGTGCACCCTGGATTCCTGCTaGGAGCAGGCAAGAACCTCTGTTGGTTTTCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: QIQYQRCTLDSC*EQARTSVGFQE Trigger: CTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGGGTGCACCTTTGGTACTGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR CAA 90 bp | GACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGTTAACGGGCTCCTTCGGATGTACCCAGAACAAAGTCTaGTTTTCCTGTGGTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: DPKVSFRKGTQLTGSFGCTQNKV*FSCGDR Trigger: CCTGTCACCACAGGAAAACAAGACTTTGTTCTGGGT...ACATCCGAAGGAGCCCGTTAACTGGGTACCCTTTCTGAAGCTCACTTTTGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR TCA 72 bp | TGTGTACCACTGACTTCCACTGAATTTGTCCTGAAATaGAGGCAGTCTGCACGAGGCTGGTGCATAAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: CVPLTSTEFVLK*RQSARGWCIRL Trigger: TAGCCTTATGCACCAGCCTCGTGCAGACTGCCTTCATTTCAGGACAAATTCAGTGGAAGTCAGTGGTACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR GCA 72 bp | GAGAGCACTGGAGTAGAAAGACAGTTTTCTCATGAATaGCGAATTTTCTCCAGGAATGCTGACGGGTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ESTGVERQFSHE*RIFSRNADGCP Trigger: GGGACACCCGTCAGCATTCCTGGAGAAAATTCGGCATTCATGAGAAAACTGTCTTTCTACTCCAGTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGGAAAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTGGTGGACTTTTCTGTTaGGGTTCAATAACAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: KGKSLALNSLPAGSQPYIGGLFC*GSITGR Trigger: TCTGCCTGTTATTGAACCCAAACAGAAAAGTCCACC...AATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTTTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGCAGGAAGCCAACCCTACATTTGCCTCAATTCAGATCAGTTCAGATGAAAGGCAAGAACCTCTGTaGGTTTTCAAGAGAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: FLQEANPTFASIQISSDERQEPL*VFKRAG Trigger: CCCTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCT...TTCATCTGAACTGATCTGAATTGAGGCAAATGTAGGGTTGGCTTCCTGCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR TCA 72 bp | GGCCATCATAATTGCATGTGTACCACTGACTTCCACTaGATTTGTCCTGAAATGAAGGCAGTCTGCACGAGG | + |
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Preference number: 3 (lower is better) Translates to: GHHNCMCTTDFH*ICPEMKAVCTR Trigger: CCTCGTGCAGACTGCCTTCATTTCAGGACAAATTCAGTGGAAGTCAGTGGTACACATGCAATTATGATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 72 bp | GCCACCAGTTCCCCTGTATACTCACTCTACCAAGGGTaGACTTTTCTGTTTGGGTTCAATAACAGGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: ATSSPVYSLYQG*TFLFGFNNRQK Trigger: TTTCTGCCTGTTATTGAACCCAAACAGAAAAGTCCACCCTTGGTAGAGTGAGTATACAGGGGAACTGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CCA 72 bp | ACTATGGCCACATTTTCATTCAAACCACCACATGGGTaGAGGCAGAGCACAATTTTAAAGGGTTGTAGCATA | + |
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Preference number: 3 (lower is better) Translates to: TMATFSFKPPHG*RQSTILKGCSI Trigger: TATGCTACAACCCTTTAAAATTGTGCTCTGCCTCCACCCATGTGGTGGTTTGAATGAAAATGTGGCCATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR-3UTR CAA 90 bp | GAACACTTGTTCCAATACAACCACCACCTTGAAGAATTATTATCCATAACTCTTGTGGGGTCCAGTTTTTaGGTTGCTACATACATACTA | + |
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Preference number: 3 (lower is better) Translates to: EHLFQYNHHLEELLSITLVGSSF*VATYIL Trigger: TAGTATGTATGTAGCAACCAAAAAACTGGACCCCAC...AAGAGTTATGGATAATAATTCTTCAAGGTGGTGGTTGTATTGGAACAAGTGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CAA 72 bp | CCCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTaGGTTTTCAAGAGAGCAGGGCAGGGCAGTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PWIPAESRQEPL*VFKRAGQGSPC Trigger: ACAGGGACTGCCCTGCCCTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR TCA 90 bp | AGGGCAGGGCAGTCCCTGTCTTTCAGGAGCAGCACAGAGGGAGGAAGCTCTGAGGGCCGCTATCTTTCCTaGTGTCTCCATTTCATACAT | + |
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Preference number: 4 (lower is better) Translates to: RAGQSLSFRSSTEGGSSEGRYLS*CLHFIH Trigger: ATGTATGAAATGGAGACATCAGGAAAGATAGCGGCC...CTCAGAGCTTCCTCCCTCTGTGCTGCTCCTGAAAGACAGGGACTGCCCTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | GAAGCAGATCAAGGAATCATGGACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGTCAGTACGCATGCTGTaGCCCCTGCAGCCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EADQGIMDPKVSFRKGTQSVRML*PLQPLL Trigger: CAGCAGGGGCTGCAGGGGGCACAGCATGCGTACTGA...CTGGGTACCCTTTCTGAAGCTCACTTTTGGGTCCATGATTCCTTGATCTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR CCA 90 bp | CCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTGGTTTTCAAGAGAGCAGGCCCCGGTAGAGGTCTaGAAAGGTCTGCATCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGFLLRAGKNLCWFSREQAPVEV*KGLHLH Trigger: GTGAAGATGCAGACCTTTCCAGACCTCTACCGGGGC...CTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR TCA 90 bp | AAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTTGCCTCCCAGCAGCTGCATTCTaGAGGTCACTCAGTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KSLALNSLPAGSQPYICLPAAAF*RSLSFA Trigger: GGCAAAACTGAGTGACCTTCAGAATGCAGCTGCTGG...GAGGCAAATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR CCA 90 bp | CCTGGATTCCTGCTGAGAGCAGGCAAGAACCTCTGTTGGTTTTCAAGAGAGCAGAGGTCGATGGCAGCTTaGATGGCTGGATTGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: PGFLLRAGKNLCWFSREQRSMAA*MAGLDF Trigger: GAAATCCAATCCAGCCATCCAAGCTGCCATCGACCT...CTGCTCTCTTGAAAACCAACAGAGGTTCTTGCCTGCTCTCAGCAGGAATCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | AAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTTGCCTCAAAGGAACCAGCAGCTaGATTCTGAAGGTCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: KSLALNSLPAGSQPYICLKGTSS*ILKVTQ Trigger: CTGAGTGACCTTCAGAATGCAGCTGCTGGTTCCTTT...GAGGCAAATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | GACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGTTAACGGGCTCCTTCGGATGTATGCGAAGAATGACCTaGTCAGTTCATAGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: DPKVSFRKGTQLTGSFGCMRRMT*SVHSHQ Trigger: TTGGTGGCTATGAACTGAGCAGGTCATTCTTCGCAT...ACATCCGAAGGAGCCCGTTAACTGGGTACCCTTTCTGAAGCTCACTTTTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | GACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGTTAACGGGCTCCTTCGGATGTCTGACGAGTCCTGTCTaGTTTCCAGTCATAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: DPKVSFRKGTQLTGSFGCLTSPV*FPVIER Trigger: TCTTTCTATGACTGGAAAGCAGACAGGACTCGTCAG...ACATCCGAAGGAGCCCGTTAACTGGGTACCCTTTCTGAAGCTCACTTTTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR TCA 90 bp | AAGGGAAAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTCTCAGTTTTGCCTGCTaGTCCAATCCAACCACTTTA | + |
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Preference number: 4 (lower is better) Translates to: KGKSLALNSLPAGSQPYILSFAC*SNPTTL Trigger: TAAAGTGGTTGGATTGGATCAGCAGGCAAAACTGAG...AATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTTTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | AAGGGAAAGAGCTTGGCTTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTCTTCTCGAAGTAAAGTaGTTGAGAGCCCATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KGKSLALNSLPAGSQPYILLEVK*LRAHGR Trigger: TCTACCATGGGCTCTCAAGCACTTTACTTCGAGAAG...AATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAAGCCAAGCTCTTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR CCA 90 bp | ACCCTGAAACTTCATCAAGAACGTAGAAGCCACACAACTATGCATATAGGTTTTATTTCACAAGCTCCGTaGGGCAGAGAACCAGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLKLHQERRSHTTMHIGFISQAP*GREPAR Trigger: CCGCGCTGGTTCTCTGCCCCACGGAGCTTGTGAAAT...AAAACCTATATGCATAGTTGTGTGGCTTCTACGTTCTTGATGAAGTTTCAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR TCA 90 bp | GAAGCAGATCAAGGAATCATGGACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGGATCTCCTTCACAACTaGCCAAACTGTATTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: EADQGIMDPKVSFRKGTQDLLHN*PNCILT Trigger: AGTCAGAATACAGTTTGGTCAGTTGTGAAGGAGATC...CTGGGTACCCTTTCTGAAGCTCACTTTTGGGTCCATGATTCCTTGATCTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | TTCCTGCAGGAAGCCAACCCTACATTTGCCTCAATTCAGATCAGTTCAGATGAAAGGTCTGGAAAGGTCTaGATCTTCACCTTCATCGTG | + |
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Preference number: 4 (lower is better) Translates to: FLQEANPTFASIQISSDERSGKV*IFTFIV Trigger: CACGATGAAGGTGAAGATGCAGACCTTTCCAGACCT...TTCATCTGAACTGATCTGAATTGAGGCAAATGTAGGGTTGGCTTCCTGCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| 3UTR CAA 72 bp | TTTGAACAGTCTTCCTGCAGGAAGCCAACCCTACATTaGCCTCAATTCAGATCAGTTCAGATGAAGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FEQSSCRKPTLH*PQFRSVQMKQH Trigger: GTGCTGCTTCATCTGAACTGATCTGAATTGAGGCAAATGTAGGGTTGGCTTCCTGCAGGAAGACTGTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR GCA 90 bp | GAACACTTGTTCCAATACAACCACCACCTTGAAGAATTATTATCCATAACTCTTATCGTGTCGAAGGGCTaGCCAGTCAGTACGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: EHLFQYNHHLEELLSITLIVSKG*PVSTHA Trigger: AGCATGCGTACTGACTGGGCAGCCCTTCGACACGAT...AAGAGTTATGGATAATAATTCTTCAAGGTGGTGGTTGTATTGGAACAAGTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS GCA 90 bp | GCAGAGAACCAGCGCGGCAAAGGCGGAGGCAAAGGAACCAGCAGCTaGATTCTGAAGGTCACTCAGTTTTGCCTGCTGATCCAATCCAAC | + |
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Preference number: 5 (lower is better) Translates to: AENQRGKGGGKGTSS*ILKVTQFCLLIQSN Trigger: GTTGGATTGGATCAGCAGGCAAAACTGAGTGACCTTCAGAATGCAGCTGCTGGTTCCTTTGCCTCCGCCTTTGCCGCGCTGGTTCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS-3UTR CAA 90 bp | GAAGCAGATCAAGGAATCATGGACCCAAAAGTGAGCTTCAGAAAGGGTACCCAGGAGGTCGATGGCAGCTaGGATGGCTGGATTGGATTT | + |
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Preference number: 5 (lower is better) Translates to: EADQGIMDPKVSFRKGTQEVDGS*DGWIGF Trigger: AAATCCAATCCAGCCATCCAAGCTGCCATCGACCTC...CTGGGTACCCTTTCTGAAGCTCACTTTTGGGTCCATGATTCCTTGATCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS GCA 72 bp | GCAGAAGCCGTAACACATGAACAGCACCGAGTTCTCTaGTATATTGGCAATCAGGGCGGGGCTGGTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: AEAVTHEQHRVL*YIGNQGGAGAL Trigger: AAGGGCACCAGCCCCGCCCTGATTGCCAATATAGCAGAGAACTCGGTGCTGTTCATGTGTTACGGCTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS GCA 72 bp | GGAACCAGCAGCTGCATTCTGAAGGTCACTCAGTTTTaGCTGCTGATCCAATCCAACCACTTTACGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: GTSSCILKVTQF*LLIQSNHFTDH Trigger: GTGGTCCGTAAAGTGGTTGGATTGGATCAGCAGGCAAAACTGAGTGACCTTCAGAATGCAGCTGCTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS TCA 72 bp | CAAGGGGCCGTCCTTCCTAAAGATCTCCTTCACAACTaGCCAAACTGTATTCTGACTGGCCGCTATCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QGAVLPKDLLHN*PNCILTGRYLS Trigger: GGAAAGATAGCGGCCAGTCAGAATACAGTTTGGTCAGTTGTGAAGGAGATCTTTAGGAAGGACGGCCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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| CDS CAA 72 bp | AGGAACCAGCAGCTGCATTCTGAAGGTCACTCAGTTTaGCCTGCTGATCCAATCCAACCACTTTACGGACCA | + |
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Preference number: 6 (lower is better) Translates to: RNQQLHSEGHSV*PADPIQPLYGP Trigger: TGGTCCGTAAAGTGGTTGGATTGGATCAGCAGGCAAAACTGAGTGACCTTCAGAATGCAGCTGCTGGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033871.8 |
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