Pregenerated sensors for SLC25A11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014606Ensembl transcript IDs: ENSMUST00000014750.15, ENSMUST00000136383.2, ENSMUST00000139638.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTCTCCTCAGCTCTaGCTTGGATTCCCCAGAGAGAGGGATCTGCTGTCTGGTGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: LCHLDSFCFLLSPQL*LGFPRERDLLSGVP Trigger: GGGCACACCAGACAGCAGATCCCTCTCTCTGGGGAATCCAAGGCAGAGCTGAGGAGACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| 3UTR GCA 90 bp | AGCTCTGCCTTGGATTCCCCAGAGAGAGGGATCTGCTGTCTGGTGTaGCCTGAATCTAACACCCAAGAGGAGACTAGAAATCCTTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: SSALDSPERGICCLV*PESNTQEETRNPWC Trigger: ACACCAAGGATTTCTAGTCTCCTCTTGGGTGTTAGATTCAGGGCACACCAGACAGCAGATCCCTCTCTCTGGGGAATCCAAGGCAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| 3UTR-3UTR GCA 90 bp | TTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTCTCCTCCCAGAGAGAGGGATCTaGTGTCTGGTGTGCCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: FHHRPFVILTASAFSCLLPERGI*CLVCPE Trigger: TTCAGGGCACACCAGACAGCAGATCCCTCTCTCTGG...GAGGAGACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| 3UTR-3UTR TCA 90 bp | AGAGATATAAGCTTCTTTGTGCAGCTACCTCCCCCTATGATCCTTAAGACTATCGACCCTTTGTCATCTTaGCAGCTTCTGCTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RDISFFVQLPPPMILKTIDPLSS*QLLLSP Trigger: AGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTC...GATAGTCTTAAGGATCATAGGGGGAGGTAGCTGCACAAAGAAGCTTATATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| 3UTR CCA 72 bp | CTGCCTTGGATTCCCCAGAGAGAGGGATCTGCTGTCTaGTGTGCCCTGAATCTAACACCCAAGAGGAGACTA | + |
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Preference number: 3 (lower is better) Translates to: LPWIPQREGSAV*CALNLTPKRRL Trigger: TAGTCTCCTCTTGGGTGTTAGATTCAGGGCACACCAGACAGCAGATCCCTCTCTCTGGGGAATCCAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| 3UTR GCA 72 bp | TTGGATTCCCCAGAGAGAGGGATCTGCTGTCTGGTGTaGCCTGAATCTAACACCCAAGAGGAGACTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: LDSPERGICCLV*PESNTQEETRN Trigger: ATTTCTAGTCTCCTCTTGGGTGTTAGATTCAGGGCACACCAGACAGCAGATCCCTCTCTCTGGGGAATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | AGGGGCAAAGTGATTCTAAGCATCAGGCAAGCACAGCAGGCAGGCTGGAGTAGGAGCCCCGCCACAGTGTaGGGACTCCTTCTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGKVILSIRQAQQAGWSRSPATV*GLLLPW Trigger: CCAGGGAAGAAGGAGTCCCCACACTGTGGCGGGGCT...CCTACTCCAGCCTGCCTGCTGTGCTTGCCTGATGCTTAGAATCACTTTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR TCA 90 bp | CCTCCAGGGCATAGCGACTGTAATAGCAGTGGATGGCTTGGAAGCCTGGCACACAGCCCTTCCACAGGCTaGAGAAACCCTCATAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PPGHSDCNSSGWLGSLAHSPSTG*RNPHSG Trigger: TCCGCTATGAGGGTTTCTTCAGCCTGTGGAAGGGCT...GTGTGCCAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCCCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| 3UTR CAA 72 bp | CTCCAGGGCATAGCGACTGTAATAGCAGTGGATGGCTaGGAAGCCTGGCACACTAGTCCTGGGACCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQGIATVIAVDG*EAWHTSPGTMP Trigger: TGGCATGGTCCCAGGACTAGTGTGCCAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR GCA 90 bp | AAAGTGATTCTAAGCATCAGGCAAGCACAGCAGGCAGGCTGGAGTAGGGGGAGAACCAGGTCCAGGGGCTaGACAAAGACTGTAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: KVILSIRQAQQAGWSRGRTRSRG*TKTVAP Trigger: GGGTGCTACAGTCTTTGTGCAGCCCCTGGACCTGGT...TCTCCCCCTACTCCAGCCTGCCTGCTGTGCTTGCCTGATGCTTAGAATCACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR TCA 90 bp | CCAGGTCCTCCAGGGCATAGCGACTGTAATAGCAGTGGATGGCTTGGAAGCCTGTCTTCAGGATGCTGGTaGGGGCATGGAAACTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PGPPGHSDCNSSGWLGSLSSGCW*GHGNWF Trigger: AAACCAGTTTCCATGCCCTCACCAGCATCCTGAAGA...CAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCCCTGGAGGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR TCA 90 bp | TTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTCTCCTCCAAGCTGGGCGGCATTaGCAACGACAGCTCGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FHHRPFVILTASAFSCLLQAGRH*QRQLEP Trigger: TGGCTCGAGCTGTCGTTGTCAATGCCGCCCAGCTTG...GAGGAGACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR GCA 90 bp | AGGGGCAAAGTGATTCTAAGCATCAGGCAAGCACAGCAGGCAGGCTGGAGTAGGACAGCCCAGTGTAAATaGCCTTCAGGCCTTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RGKVILSIRQAQQAGWSRTAQCK*PSGLLS Trigger: AGACAGAAGGCCTGAAGGGCATTTACACTGGGCTGT...CCTACTCCAGCCTGCCTGCTGTGCTTGCCTGATGCTTAGAATCACTTTGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR GCA 90 bp | CCAGGTCCTCCAGGGCATAGCGACTGTAATAGCAGTGGATGGCTTGGAAGCCTGCACAAATGCACCAGTTaGACCTGCAGTCATGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: PGPPGHSDCNSSGWLGSLHKCTS*TCSHAN Trigger: ATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTG...CAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCCCTGGAGGACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR GCA 90 bp | GGCATAGCGACTGTAATAGCAGTGGATGGCTTGGAAGCCTGGCACACTAGTCCTTGGCGTTCCCACAAATaGACCAGTTGCACCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GIATVIAVDGLEAWHTSPWRSHK*TSCTCS Trigger: ACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCA...AGGACTAGTGTGCCAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | GTGTGCCCTGAATCTAACACCCAAGAGGAGACTAGAAATCCTTGGTGTGTGTCTACGGCGCTGGTCAGCTaGAAGCCGACCATCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VCPESNTQEETRNPWCVSTALVS*KPTISS Trigger: ACTGCTGATGGTCGGCTTCCAGCTGACCAGCGCCGT...AGACACACACCAAGGATTTCTAGTCTCCTCTTGGGTGTTAGATTCAGGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | TTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTCTCCTCGAGAGCCACCTCAGCTaGCGTTCCCACAAATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FHHRPFVILTASAFSCLLESHLS*RSHKCT Trigger: GGTGCATTTGTGGGAACGCCAGCTGAGGTGGCTCTC...GAGGAGACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR GCA 90 bp | TTTATTAAGTCCTCAGGGAGGAGGAAGGCCACATCTTCCACCATAGACCCTTTGTGCACCAGTTGCACCTaGAGTCATGCCAATCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FIKSSGRRKATSSTIDPLCTSCT*SHANQG Trigger: GCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCA...CAAAGGGTCTATGGTGGAAGATGTGGCCTTCCTCCTCCCTGAGGACTTAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR GCA 90 bp | TTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTCTCCTCCCTTCACCACTCAACTaGATCCGGTTCTTCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: FHHRPFVILTASAFSCLLPSPLN*IRFFTR Trigger: CCTGGTGAAGAACCGGATGCAGTTGAGTGGTGAAGG...GAGGAGACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | AAAGTGATTCTAAGCATCAGGCAAGCACAGCAGGCAGGCTGGAGTAGGGGGAGAATGCTGGTGAGGGCATaGAAACTGGTTTTGTACTCT | + |
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Preference number: 4 (lower is better) Translates to: KVILSIRQAQQAGWSRGRMLVRA*KLVLYS Trigger: AGAGTACAAAACCAGTTTCCATGCCCTCACCAGCAT...TCTCCCCCTACTCCAGCCTGCCTGCTGTGCTTGCCTGATGCTTAGAATCACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | CACATCTTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTCAGTCGGGCATAGTATaGTGTGAAGCCCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HIFHHRPFVILTASAFSCQSGIV*CEALPQ Trigger: CTGTGGAAGGGCTTCACACCATACTATGCCCGACTG...ACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAAGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | CACATCTTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTTGTACTCTCGAGTCTTaGCCCCTTCACCACTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: HIFHHRPFVILTASAFSCCTLES*PLHHST Trigger: AGTTGAGTGGTGAAGGGGCCAAGACTCGAGAGTACA...ACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAAGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | CACATCTTCCACCATAGACCCTTTGTCATCTTGACAGCTTCTGCTTTCTCCTGTATGCTGGCGCAGAAGTaGCAGAGAATATTGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HIFHHRPFVILTASAFSCMLAQK*QRILSE Trigger: CTCTGACAATATTCTCTGCCACTTCTGCGCCAGCAT...ACAGGAGAAAGCAGAAGCTGTCAAGATGACAAAGGGTCTATGGTGGAAGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CCA 90 bp | TGGTGTGCCCTGAATCTAACACCCAAGAGGAGACTAGAAATCCTTGGTGTGTGTCCCATTCTTGTATTCTaGCTTCCCATCAATCATCCG | + |
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Preference number: 4 (lower is better) Translates to: WCALNLTPKRRLEILGVCPILVF*LPINHP Trigger: CGGATGATTGATGGGAAGCCAGAATACAAGAATGGG...ACACACACCAAGGATTTCTAGTCTCCTCTTGGGTGTTAGATTCAGGGCACACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS GCA 90 bp | GAGAGCCACCTCAGCTGGCGTTCCCACAAATGCACCAGTTGCACCTaGAGTCATGCCAATCAGGGCTTTCAGAAGAAAGCCAGGGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: ESHLSWRSHKCTSCT*SHANQGFQKKARGC Trigger: ACACCCCCTGGCTTTCTTCTGAAAGCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGGTGGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS CCA 90 bp | GAAGATGAAGGTGAGGACAGTGTGGGGGCCCAGTCGGGCATAGTATaGTGTGAAGCCCTTCCACAGGCTGAAGAAACCCTCATAGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: EDEGEDSVGAQSGIV*CEALPQAEETLIAD Trigger: GTCCGCTATGAGGGTTTCTTCAGCCTGTGGAAGGGCTTCACACCATACTATGCCCGACTGGGCCCCCACACTGTCCTCACCTTCATCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS GCA 90 bp | CCTCAGCTGGCGTTCCCACAAATGCACCAGTTGCACCTGCAGTCATaGCAATCAGGGCTTTCAGAAGAAAGCCAGGGGGTGTACCATCAG | + |
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Preference number: 5 (lower is better) Translates to: PQLAFPQMHQLHLQS*QSGLSEESQGVYHQ Trigger: CTGATGGTACACCCCCTGGCTTTCTTCTGAAAGCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS GCA 90 bp | CCTGATGAGAGCCACCTCAGCTGGCGTTCCCACAAATGCACCAGTTaGACCTGCAGTCATGCCAATCAGGGCTTTCAGAAGAAAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PDESHLSWRSHKCTS*TCSHANQGFQKKAR Trigger: CCTGGCTTTCTTCTGAAAGCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGGTGGCTCTCATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS CCA 90 bp | TGGAAGCCGACCATCAGCAGTCATCCTGATGAGAGCCACCTCAGCTaGCGTTCCCACAAATGCACCAGTTGCACCTGCAGTCATGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: WKPTISSHPDESHLS*RSHKCTSCTCSHAN Trigger: ATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGGTGGCTCTCATCAGGATGACTGCTGATGGTCGGCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCAAAGTGATTCTAAGCATCAGGCAAGCACAGCAGGCAGGCTGGAGTAGGCCCCCAAACAGGAACTaGACAGACTTAGGGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: RGKVILSIRQAQQAGWSRPPNRN*TDLGEV Trigger: TACCTCCCCTAAGTCTGTCAAGTTCCTGTTTGGGGG...CCTACTCCAGCCTGCCTGCTGTGCTTGCCTGATGCTTAGAATCACTTTGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CAA 90 bp | CTCCAGGGCATAGCGACTGTAATAGCAGTGGATGGCTTGGAAGCCTGGCACACTTTGTACTCTCGAGTCTaGGCCCCTTCACCACTCAAC | + |
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Preference number: 5 (lower is better) Translates to: LQGIATVIAVDGLEAWHTLYSRV*APSPLN Trigger: GTTGAGTGGTGAAGGGGCCAAGACTCGAGAGTACAA...AGTGTGCCAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CAA 90 bp | GGGAAAATAAATAGAATAGCCCAGGGTAGCAGAATCCAGGTCCTCCAGGGCATAGCAAGCTGGGCGGCATaGACAACGACAGCTCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: GKINRIAQGSRIQVLQGIASWAA*TTTARA Trigger: GGCTCGAGCTGTCGTTGTCAATGCCGCCCAGCTTGC...TATGCCCTGGAGGACCTGGATTCTGCTACCCTGGGCTATTCTATTTATTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CAA 90 bp | CCAGGTCCTCCAGGGCATAGCGACTGTAATAGCAGTGGATGGCTTGGAAGCCTGCAAGAACTGCTTAGATaGAGAGTAAGAGGCAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PGPPGHSDCNSSGWLGSLQELLR*RVRGKL Trigger: CAGCTTGCCTCTTACTCTCAATCTAAGCAGTTCTTG...CAGGCTTCCAAGCCATCCACTGCTATTACAGTCGCTATGCCCTGGAGGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CAA 90 bp | AGGGGCAAAGTGATTCTAAGCATCAGGCAAGCACAGCAGGCAGGCTGGAGTAGGACATCCAGCCCATTCTaGTATTCTGGCTTCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: RGKVILSIRQAQQAGWSRTSSPF*YSGFPS Trigger: TGATGGGAAGCCAGAATACAAGAATGGGCTGGATGT...CCTACTCCAGCCTGCCTGCTGTGCTTGCCTGATGCTTAGAATCACTTTGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CAA 90 bp | CACTGGAGAGGGAAAATAAATAGAATAGCCCAGGGTAGCAGAATCCAGGTCCTCGCATGGAAACTGGTTTaGTACTCTCGAGTCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: HWRGKINRIAQGSRIQVLAWKLV*YSRVLA Trigger: GGCCAAGACTCGAGAGTACAAAACCAGTTTCCATGC...GAGGACCTGGATTCTGCTACCCTGGGCTATTCTATTTATTTTCCCTCTCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS-3UTR CAA 90 bp | AGAAAACCACACTGGAGAGGGAAAATAAATAGAATAGCCCAGGGTAGCAGAATCCCACAAATGCACCAGTaGCACCTGCAGTCATGCCAA | + |
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Preference number: 5 (lower is better) Translates to: RKPHWRGKINRIAQGSRIPQMHQ*HLQSCQ Trigger: TTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGG...GATTCTGCTACCCTGGGCTATTCTATTTATTTTCCCTCTCCAGTGTGGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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| CDS GCA 72 bp | GCGTTCCCACAAATGCACCAGTTGCACCTGCAGTCATaGCAATCAGGGCTTTCAGAAGAAAGCCAGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: AFPQMHQLHLQS*QSGLSEESQGV Trigger: CACCCCCTGGCTTTCTTCTGAAAGCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS GCA 72 bp | AGCCACCTCAGCTGGCGTTCCCACAAATGCACCAGTTaGACCTGCAGTCATGCCAATCAGGGCTTTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SHLSWRSHKCTS*TCSHANQGFQK Trigger: CTTCTGAAAGCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS CCA 72 bp | ACCATCAGCAGTCATCCTGATGAGAGCCACCTCAGCTaGCGTTCCCACAAATGCACCAGTTGCACCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TISSHPDESHLS*RSHKCTSCTCS Trigger: ACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGGTGGCTCTCATCAGGATGACTGCTGATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS CAA 72 bp | GAGCCACCTCAGCTGGCGTTCCCACAAATGCACCAGTaGCACCTGCAGTCATGCCAATCAGGGCTTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: EPPQLAFPQMHQ*HLQSCQSGLSE Trigger: TTCTGAAAGCCCTGATTGGCATGACTGCAGGTGCAACTGGTGCATTTGTGGGAACGCCAGCTGAGGTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS CAA 90 bp | AGGATGCTGGTGAGGGCATGGAAACTGGTTTTGTACTCTCGAGTCTaGGCCCCTTCACCACTCAACTGCATCCGGTTCTTCACCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RMLVRAWKLVLYSRV*APSPLNCIRFFTRS Trigger: GGACCTGGTGAAGAACCGGATGCAGTTGAGTGGTGAAGGGGCCAAGACTCGAGAGTACAAAACCAGTTTCCATGCCCTCACCAGCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014750.15 ENSMUST00000136383.2 ENSMUST00000139638.2 |
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| CDS CAA 90 bp | AGGCCTTCTGTCTTCAGGATGCTGGTGAGGGCATGGAAACTGGTTTaGTACTCTCGAGTCTTGGCCCCTTCACCACTCAACTGCATCCGG | + |
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Preference number: 6 (lower is better) Translates to: RPSVFRMLVRAWKLV*YSRVLAPSPLNCIR Trigger: CCGGATGCAGTTGAGTGGTGAAGGGGCCAAGACTCGAGAGTACAAAACCAGTTTCCATGCCCTCACCAGCATCCTGAAGACAGAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014750.15 ENSMUST00000136383.2 ENSMUST00000139638.2 |
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| CDS CAA 72 bp | GTGAGGGCATGGAAACTGGTTTTGTACTCTCGAGTCTaGGCCCCTTCACCACTCAACTGCATCCGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VRAWKLVLYSRV*APSPLNCIRFF Trigger: GAAGAACCGGATGCAGTTGAGTGGTGAAGGGGCCAAGACTCGAGAGTACAAAACCAGTTTCCATGCCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014750.15 ENSMUST00000136383.2 ENSMUST00000139638.2 |
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| CDS CAA 72 bp | GTCTTCAGGATGCTGGTGAGGGCATGGAAACTGGTTTaGTACTCTCGAGTCTTGGCCCCTTCACCACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: VFRMLVRAWKLV*YSRVLAPSPLN Trigger: GTTGAGTGGTGAAGGGGCCAAGACTCGAGAGTACAAAACCAGTTTCCATGCCCTCACCAGCATCCTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014750.15 ENSMUST00000136383.2 ENSMUST00000139638.2 |
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| CDS CCA 72 bp | ATTAAACACATTTTTGTAGCCACGGCGCTGGTCAGCTaGAAGCCGACCATCAGCAGTCATCCTGATGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: IKHIFVATALVS*KPTISSHPDES Trigger: GCTCTCATCAGGATGACTGCTGATGGTCGGCTTCCAGCTGACCAGCGCCGTGGCTACAAAAATGTGTTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014750.15 ENSMUST00000139638.2 |
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| CDS TCA 72 bp | AAATGCCCTTCAGGCCTTCTGTCTTCAGGATGCTGGTaGGGGCATGGAAACTGGTTTTGTACTCTCGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: KCPSGLLSSGCW*GHGNWFCTLES Trigger: AGACTCGAGAGTACAAAACCAGTTTCCATGCCCTCACCAGCATCCTGAAGACAGAAGGCCTGAAGGGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014750.15 ENSMUST00000136383.2 ENSMUST00000139638.2 |
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| CDS CCA 72 bp | TTGTATTCTGGCTTCCCATCAATCATCCGCATATTCTaGATCCTAGTTTTGACGATGTCCACAGGCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LYSGFPSIIRIF*ILVLTMSTGME Trigger: TTCCATGCCTGTGGACATCGTCAAAACTAGGATCCAGAATATGCGGATGATTGATGGGAAGCCAGAATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014750.15 |
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