Pregenerated sensors for SLC25A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003528Ensembl transcript IDs: ENSMUST00000003622.16, ENSMUST00000131507.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCAGCCATGGCCAGGCTGGACACAGATACAATGGTAGTGTTACACACACACAGCCAGGCCACAGAACTTaGGGGACAAAGGAAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSHGQAGHRYNGSVTHTQPGHRT*GTKEGA Trigger: GGCCCCTTCCTTTGTCCCTCAAGTTCTGTGGCCTGG...CTGTGTGTGTGTAACACTACCATTGTATCTGTGTCCAGCCTGGCCATGGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAGGCCATGAACCAGGGCACATAGGCACCCCAGGAAGTGGGGCACAGGGTTTGGCACTACTGCACTaGAATCATCAGAGTAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LQGHEPGHIGTPGSGAQGLALLH*NHQSRW Trigger: CCACCTACTCTGATGATTCCAGTGCAGTAGTGCCAA...ACCCTGTGCCCCACTTCCTGGGGTGCCTATGTGCCCTGGTTCATGGCCTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCATGGCCAGGCTGGACACAGATACAATGGTAGTGTTACACACACACAGCTGGAATGGAGGAGCTaGGATACCCCACTGCATCCT | + |
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Preference number: 2 (lower is better) Translates to: PSHGQAGHRYNGSVTHTQLEWRS*DTPLHP Trigger: AGGATGCAGTGGGGTATCCCAGCTCCTCCATTCCAG...CTGTGTGTGTGTAACACTACCATTGTATCTGTGTCCAGCCTGGCCATGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| 3UTR-3UTR CCA 90 bp | CACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGCACATGGATAAGAGACACCCAGCCATaGCCAGGCTGGACACAGATA | + |
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Preference number: 2 (lower is better) Translates to: HMTENTKQACGSQASTWIRDTQP*PGWTQI Trigger: TATCTGTGTCCAGCCTGGCCATGGCTGGGTGTCTCT...TATCCATGTGCTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| 3UTR CCA 72 bp | AGATACAATGGTAGTGTTACACACACACAGACCACATaGGATATACAGAACTATGGGACACACCAGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: RYNGSVTHTQTT*DIQNYGTHQAT Trigger: TGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGTCTGTGTGTGTGTAACACTACCATTGTATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR TCA 90 bp | CTCCAAGGCCATGAACCAGGGCACATAGGCACCCCAGGAAGTGGGGCACAGGGTCGAACATCCCAAACCTaGCAGCCGCCTTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LQGHEPGHIGTPGSGAQGRTSQT*QPPWGW Trigger: CCATCCCCAAGGCGGCTGTCAGGTTTGGGATGTTCG...ACCCTGTGCCCCACTTCCTGGGGTGCCTATGTGCCCTGGTTCATGGCCTTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR GCA 90 bp | CTCCAAGGCCATGAACCAGGGCACATAGGCACCCCAGGAAGTGGGGCACAGGGTTCATCTAGCTGCAGCTaGGTCTTCACGTATTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: LQGHEPGHIGTPGSGAQGSSSCS*VFTYSV Trigger: GACCGAATACGTGAAGACGCAGCTGCAGCTAGATGA...ACCCTGTGCCCCACTTCCTGGGGTGCCTATGTGCCCTGGTTCATGGCCTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CCA 90 bp | CAGACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGAGGCCCAGGACGCCATaGCTGCGGACAGTTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: QTTWDIQNYGTHQATELERPRTP*LRTVCR Trigger: GCGGCAAACTGTCCGCAGCCATGGCGTCCTGGGCCT...CTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR TCA 90 bp | GGCACAGGGTCACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGCCCGCATGTGGTTGCTaGGGAACTCGAACATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GTGSHDREHETGMWLTSKPACGC*GTRTSQ Trigger: TTGGGATGTTCGAGTTCCTCAGCAACCACATGCGGG...CTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTGACCCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CCA 90 bp | CTCCAAGGCCATGAACCAGGGCACATAGGCACCCCAGGAAGTGGGGCACAGGGTTTCATAGGTTTGTTGTaGTTGTCTCCTTGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: LQGHEPGHIGTPGSGAQGFIGLL*LSPWYQ Trigger: CTGGTACCAAGGAGACAACCACAACAAACCTATGAA...ACCCTGTGCCCCACTTCCTGGGGTGCCTATGTGCCCTGGTTCATGGCCTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CCA 90 bp | GGCACAGGGTCACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGTTGTGGTTGTCTCCTTaGTACCAGTTGCGTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GTGSHDREHETGMWLTSKLWLSP*YQLRRE Trigger: CTCCCTACGCAACTGGTACCAAGGAGACAACCACAA...CTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTGACCCTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR TCA 90 bp | ACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGGGATGCGTAGGGAGGTCATaGCAAAGAATCGGATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TTWDIQNYGTHQATELEGCVGRS*QRIGWL Trigger: AAGCCATCCGATTCTTTGTCATGACCTCCCTACGCA...TCCCTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR GCA 90 bp | CAGACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGGCTCGTTCATCTAGCTaGAGCTGCGTCTTCACGTAT | + |
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Preference number: 4 (lower is better) Translates to: QTTWDIQNYGTHQATELEARSSS*SCVFTY Trigger: ATACGTGAAGACGCAGCTGCAGCTAGATGAACGAGC...CTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR GCA 90 bp | CACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGCACATGGATATCCAAAGACACTGGCTaGACCCGCAGTAGCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: HMTENTKQACGSQASTWISKDTG*TRSSSK Trigger: TTTGGAGCTACTGCGGGTGCAGCCAGTGTCTTTGGA...TATCCATGTGCTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CCA 90 bp | ACAATGGTAGTGTTACACACACACAGACCACATGGGATATACAGAACTATGGGACTGTCGAGCCTACCTTaGGCATCCCGCATGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TMVVLHTHRPHGIYRTMGLSSLP*ASRMWL Trigger: CAACCACATGCGGGATGCCCAAGGTAGGCTCGACAG...TCCCATAGTTCTGTATATCCCATGTGGTCTGTGTGTGTGTAACACTACCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CCA 90 bp | ACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGGGAAAAATCCTCGGTACTTaGGGTTGGAGGAAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TTWDIQNYGTHQATELEGKILGT*GWRKSG Trigger: ACCAGACTTCCTCCAACCCCAAGTACCGAGGATTTT...TCCCTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CCA 90 bp | CAGACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGATCTCTCTAACCCCGTaGAAAAATCCTCGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: QTTWDIQNYGTHQATELEISLTP*KNPRYL Trigger: CAAGTACCGAGGATTTTTCCACGGGGTTAGAGAGAT...CTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | GGCACAGGGTCACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGGCTGTCGAGCCTACCTaGGGCATCCCGCATGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GTGSHDREHETGMWLTSKAVEPT*GIPHVV Trigger: AACCACATGCGGGATGCCCAAGGTAGGCTCGACAGC...CTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTGACCCTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | CACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGCACATGGATAATGGCTGCGGACAGTTaGCCGCACGCAGTCTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: HMTENTKQACGSQASTWIMAADS*PHAVSD Trigger: ATCGGAGACTGCGTGCGGCAAACTGTCCGCAGCCAT...TATCCATGTGCTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS GCA 90 bp | CGTAGGGAGGTCATGACAAAGAATCGGATGGCTTGGTTTGAGCCCTaGTTCAGTACAGTCGCAGTAAGGCCTTGGTATGTTCCCTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: RREVMTKNRMAWFEP*FSTVAVRPWYVPFS Trigger: GCTAAAGGGAACATACCAAGGCCTTACTGCGACTGTACTGAAGCAGGGCTCAAACCAAGCCATCCGATTCTTTGTCATGACCTCCCTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003622.16 ENSMUST00000131507.2 |
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| CDS-3UTR CAA 90 bp | ACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGGGATCTCCTTGGTACCAGTaGCGTAGGGAGGTCATGACA | + |
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Preference number: 5 (lower is better) Translates to: TTWDIQNYGTHQATELEGSPWYQ*RREVMT Trigger: TGTCATGACCTCCCTACGCAACTGGTACCAAGGAGA...TCCCTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | CAGACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGAAAAATCCTCGGTACTaGGGGTTGGAGGAAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QTTWDIQNYGTHQATELEKNPRY*GLEEVW Trigger: CCAGACTTCCTCCAACCCCAAGTACCGAGGATTTTT...CTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | CAGACCACATGGGATATACAGAACTATGGGACACACCAGGCCACAGAACTTGAGATAGGTTTGTTGTGGTaGTCTCCTTGGTACCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QTTWDIQNYGTHQATELEIGLLW*SPWYQL Trigger: CAACTGGTACCAAGGAGACAACCACAACAAACCTAT...CTCAAGTTCTGTGGCCTGGTGTGTCCCATAGTTCTGTATATCCCATGTGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | CACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGCACATGGATAGGGTTCATAGGTTTGTaGTGGTTGTCTCCTTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: HMTENTKQACGSQASTWIGFIGL*WLSPWY Trigger: GTACCAAGGAGACAACCACAACAAACCTATGAACCC...TATCCATGTGCTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | CACATGACAGAGAACACGAAACAGGCATGTGGCTCACAAGCAAGCACATGGATAAGTGGGTTCATAGGTTaGTTGTGGTTGTCTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: HMTENTKQACGSQASTWISGFIG*LWLSPW Trigger: CCAAGGAGACAACCACAACAAACCTATGAACCCACT...TATCCATGTGCTTGCTTGTGAGCCACATGCCTGTTTCGTGTTCTCTGTCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS-3UTR CAA 90 bp | ACAATGGTAGTGTTACACACACACAGACCACATGGGATATACAGAACTATGGGACCTTGTAGAATGCCTTaGGCCCCTCATTCTTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: TMVVLHTHRPHGIYRTMGPCRMP*APHSLG Trigger: TCCTAAAGAATGAGGGGCCAAAGGCATTCTACAAGG...TCCCATAGTTCTGTATATCCCATGTGGTCTGTGTGTGTGTAACACTACCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS CCA 72 bp | CGCCTGCTAGGATTGCCTTCCCGGGGTGCGTCAGTTTaGGCTTCCCGGACCCCGGCGCGGCGGCCGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: RLLGLPSRGASV*ASRTPARRPTE Trigger: CTCTGTCGGCCGCCGCGCCGGGGTCCGGGAAGCCCAAACTGACGCACCCCGGGAAGGCAATCCTAGCAGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS CAA 72 bp | CCGCCTGCTAGGATTGCCTTCCCGGGGTGCGTCAGTTaGGGCTTCCCGGACCCCGGCGCGGCGGCCGACAGA | + |
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Preference number: 6 (lower is better) Translates to: PPARIAFPGCVS*GFPDPGAAADR Trigger: TCTGTCGGCCGCCGCGCCGGGGTCCGGGAAGCCCAAACTGACGCACCCCGGGAAGGCAATCCTAGCAGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS GCA 72 bp | CCACGCCGGCACCCAGACCGCACAATAGTCCTCTCCTaGTGTCGAGCCTACCTTGGGCATCCCGCATGTGGT | + |
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Preference number: 6 (lower is better) Translates to: PRRHPDRTIVLS*CRAYLGHPACG Trigger: ACCACATGCGGGATGCCCAAGGTAGGCTCGACAGCAGGAGAGGACTATTGTGCGGTCTGGGTGCCGGCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003622.16 |
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| CDS CCA 72 bp | TGCACCCGCAGTAGCTCCAAAGACCCCCGTGATCAGTaGGTTCATAGGTTTGTTGTGGTTGTCTCCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: CTRSSSKDPRDQ*VHRFVVVVSLV Trigger: TACCAAGGAGACAACCACAACAAACCTATGAACCCACTGATCACGGGGGTCTTTGGAGCTACTGCGGGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003622.16 ENSMUST00000131507.2 |
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