Pregenerated sensors for SLC24A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037996Ensembl transcript IDs: ENSMUST00000044990.11, ENSMUST00000107155.8, ENSMUST00000107157.9, ENSMUST00000107158.9, ENSMUST00000146815.2
Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTaGACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCA | + |
Preference number: 1 (lower is better) Translates to: PSSNLPRRDTCLPGL*TSCLFSRLQGAWSP Trigger: TGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | CCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTaGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGA | + |
Preference number: 1 (lower is better) Translates to: PGLCTSCLFSRLQGA*SPEPGGTIHAVGLR Trigger: TCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | TCCGACCAGCGAGGAGTACCTGTCAGTGGTGATGGAGGTCCTCTTTaGCTCTTACACGGAGTCATTTCATCAGGCAAGGGCGAGGTGCCT | + |
Preference number: 1 (lower is better) Translates to: SDQRGVPVSGDGGPL*LLHGVISSGKGEVP Trigger: AGGCACCTCGCCCTTGCCTGATGAAATGACTCCGTGTAAGAGGCAAAGAGGACCTCCATCACCACTGACAGGTACTCCTCGCTGGTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | CCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTaGCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAA | + |
Preference number: 1 (lower is better) Translates to: PMGIHPSSNLPRRDT*LPGLCTSCLFSRLQ Trigger: TTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | GCCTCTTACACGGAGTCATTTCATCAGGCAAGGGCGAGGTGCCTGTaGAGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCC | + |
Preference number: 1 (lower is better) Translates to: ASYTESFHQARARCL*SECPHGNPSFLQPS Trigger: GGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACTTCACAGGCACCTCGCCCTTGCCTGATGAAATGACTCCGTGTAAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | GAACTCCTAGCTCTGAGGCCCCTGGAGTGCTTCCTGGCTTCCTGGTaGGGAGGGGACAGTAATGATGGGAGAAGACATTCTCTGACCTTT | + |
Preference number: 1 (lower is better) Translates to: ELLALRPLECFLASW*GGDSNDGRRHSLTF Trigger: AAAGGTCAGAGAATGTCTTCTCCCATCATTACTGTCCCCTCCTCACCAGGAAGCCAGGAAGCACTCCAGGGGCCTCAGAGCTAGGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | ACTCTGCCGAATTCAACAGAAGCTCTGATGGACGGTCTGACTTTTTaGGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCAC | + |
Preference number: 1 (lower is better) Translates to: TLPNSTEALMDGLTF*GPWASTQPVIEECH Trigger: GTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAAAAAGTCAGACCGTCCATCAGAGCTTCTGTTGAATTCGGCAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | TCAGTGGTCCTTTGTACTTTAGCAACCAGCAACAGATTCTCCCAGTaGAATCAGTCTCTGGTGGGAGCCCATGCAAGTCCACAGCATTCC | + |
Preference number: 1 (lower is better) Translates to: SVVLCTLATSNRFSQ*NQSLVGAHASPQHS Trigger: GGAATGCTGTGGACTTGCATGGGCTCCCACCAGAGACTGATTCCACTGGGAGAATCTGTTGCTGGTTGCTAAAGTACAAAGGACCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | GACAGTGGAACATGGAAGGAAACCCTTTACCAGAGTGAGACCACGTaGCCCAAGCACACCACTCCAAACAGCCTATGTACAGTTTGCCAT | + |
Preference number: 1 (lower is better) Translates to: DSGTWKETLYQSETT*PKHTTPNSLCTVCH Trigger: ATGGCAAACTGTACATAGGCTGTTTGGAGTGGTGTGCTTGGGTCACGTGGTCTCACTCTGGTAAAGGGTTTCCTTCCATGTTCCACTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | TCCAATCCTCCTGCCTCTACTTCCTCACTTCTCGGATTGCAGGTGTaGCATTATGCCTGGTTTGCGAGTCATATATGTTTTCATGCACCT | + |
Preference number: 1 (lower is better) Translates to: SNPPASTSSLLGLQV*HYAWFASHICFHAP Trigger: AGGTGCATGAAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTAGAGGCAGGAGGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | CAGGATCTTCCAATCCTCCTGCCTCTACTTCCTCACTTCTCGGATTaGAGGTGTGCCATTATGCCTGGTTTGCGAGTCATATATGTTTTC | + |
Preference number: 1 (lower is better) Translates to: QDLPILLPLLPHFSD*RCAIMPGLRVIYVF Trigger: GAAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTAGAGGCAGGAGGATTGGAAGATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | CTTACTTCATCTCAAGTCACAGAGGCATTTAAAAGATGTGGGAATTaGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGA | + |
Preference number: 1 (lower is better) Translates to: LTSSQVTEAFKRCGN*RCRGVGQLSLVRSR Trigger: TCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATTCCCACATCTTTTAAATGCCTCTGTGACTTGAGATGAAGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | ACTGTCTCCACTGTGCTTGGAATGCTAAAGTTCCAGATGGGGTTATaGTGGGAGGCAGGATACAGATGTTGTACGGATCTACAGACCAAA | + |
Preference number: 1 (lower is better) Translates to: TVSTVLGMLKFQMGL*WEAGYRCCTDLQTK Trigger: TTTGGTCTGTAGATCCGTACAACATCTGTATCCTGCCTCCCATCATAACCCCATCTGGAACTTTAGCATTCCAAGCACAGTGGAGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | CTTTGGTCAGTGTGCATGAGTTTCCTCTTCCTTGACTGTCAAATCTaGTGCTCTTTGCTTTGGGATTCCAAGTGTGATCGGACCAGTAGG | + |
Preference number: 1 (lower is better) Translates to: LWSVCMSFLFLDCQI*CSLLWDSKCDRTSR Trigger: CCTACTGGTCCGATCACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGAAACTCATGCACACTGACCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | TCCGTATTCAAGTCTACTGGTCCTTGGAAGGTATTTGCACTACTGTaGACCTCTGTGGTTACAGATTCTGCCTGCCATCCAACAGCAATT | + |
Preference number: 1 (lower is better) Translates to: SVFKSTGPWKVFALL*TSVVTDSACHPTAI Trigger: AATTGCTGTTGGATGGCAGGCAGAATCTGTAACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTTGAATACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | CTCATATTCTTCTCCCATGCCTCTTGTTGCATATTTTTACTTCTCTaGAAGCAACAGGGACACTGCTGCCCATTCCCTACATTCTGTGGG | + |
Preference number: 1 (lower is better) Translates to: LIFFSHASCCIFLLL*KQQGHCCPFPTFCG Trigger: CCCACAGAATGTAGGGAATGGGCAGCAGTGTCCCTGTTGCTTTCAGAGAAGTAAAAATATGCAACAAGAGGCATGGGAGAAGAATATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | AGCTGTGAGATTAAAAAGGACCACAAAGATCCAAAGGCAGTAAACTaGACTCAGACAGACACTGGGGCAAGGCACAGGTACCTTTCTTTC | + |
Preference number: 1 (lower is better) Translates to: SCEIKKDHKDPKAVN*TQTDTGARHRYLSF Trigger: GAAAGAAAGGTACCTGTGCCTTGCCCCAGTGTCTGTCTGAGTTCAGTTTACTGCCTTTGGATCTTTGTGGTCCTTTTTAATCTCACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | TACTTCCTCACTTCTCGGATTGCAGGTGTGCCATTATGCCTGGTTTaGGAGTCATATATGTTTTCATGCACCTCTCTGTGTCTGCATTGT | + |
Preference number: 1 (lower is better) Translates to: YFLTSRIAGVPLCLV*ESYMFSCTSLCLHC Trigger: ACAATGCAGACACAGAGAGGTGCATGAAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | TATATGGAACAAAGAAGATGCAAGATACAAAAAGAGCTGCAACCTTaGCCTCACTGGCCCTCTATGATAATGCTGTGCCCAGTGCTCATC | + |
Preference number: 1 (lower is better) Translates to: YMEQRRCKIQKELQP*PHWPSMIMLCPVLI Trigger: GATGAGCACTGGGCACAGCATTATCATAGAGGGCCAGTGAGGTCAAGGTTGCAGCTCTTTTTGTATCTTGCATCTTCTTTGTTCCATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | CAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTaGTGTGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAA | + |
Preference number: 1 (lower is better) Translates to: QDQCRQAHTQSLGAI*CGSFPVSLLTIWNK Trigger: TTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCACATCAAATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | AGCAACCCAGATACTTGCCCCATACAAAGTCCAACCCTTGATAAATaGGGCATGGATTTCTCTTTCACCATTGAAATCCCAACTCTGCAT | + |
Preference number: 1 (lower is better) Translates to: SNPDTCPIQSPTLDK*GMDFSFTIEIPTLH Trigger: ATGCAGAGTTGGGATTTCAATGGTGAAAGAGAAATCCATGCCCCATTTATCAAGGGTTGGACTTTGTATGGGGCAAGTATCTGGGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | TTTAATACTGGGGCTTACATAGATGACCTAGCTACCCTGCTGTGGTaGATTGTTCTAGGCTATTATGTGCCCTTTAGTAATCTTCTCAGC | + |
Preference number: 1 (lower is better) Translates to: FNTGAYIDDLATLLW*IVLGYYVPFSNLLS Trigger: GCTGAGAAGATTACTAAAGGGCACATAATAGCCTAGAACAATCCACCACAGCAGGGTAGCTAGGTCATCTATGTAAGCCCCAGTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | GAACTCAGACAGACACTGGGGCAAGGCACAGGTACCTTTCTTTCCTaGGTCCTTCTTGACATGTGCTTTTCAAATAAATGTAGAATATGT | + |
Preference number: 1 (lower is better) Translates to: ELRQTLGQGTGTFLS*VLLDMCFSNKCRIC Trigger: ACATATTCTACATTTATTTGAAAAGCACATGTCAAGAAGGACTCAGGAAAGAAAGGTACCTGTGCCTTGCCCCAGTGTCTGTCTGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | CTTGGTTACACTAGGAACTTTTTGCTGATATCCCATGGTGACTTATaGTCAGTGGTCCTTTGTACTTTAGCAACCAGCAACAGATTCTCC | + |
Preference number: 1 (lower is better) Translates to: LGYTRNFLLISHGDL*SVVLCTLATSNRFS Trigger: GGAGAATCTGTTGCTGGTTGCTAAAGTACAAAGGACCACTGATCATAAGTCACCATGGGATATCAGCAAAAAGTTCCTAGTGTAACCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | AAATGGAGGGTTTGTAGATGGAATGCTGAACTTCAGCTGCAGTATTaGGTTACCAGACCTTTTAAATTCAGCTTTGAGTTCTGCATCCTG | + |
Preference number: 1 (lower is better) Translates to: KWRVCRWNAELQLQY*VTRPFKFSFEFCIL Trigger: CAGGATGCAGAACTCAAAGCTGAATTTAAAAGGTCTGGTAACCCAATACTGCAGCTGAAGTTCAGCATTCCATCTACAAACCCTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | GGCATGGATTTCTCTTTCACCATTGAAATCCCAACTCTGCATTGTTaGAGAGACTTGAAAGCCAGTTTCTTAGGCAGCAGACCTTTTTAT | + |
Preference number: 1 (lower is better) Translates to: GMDFSFTIEIPTLHC*RDLKASFLGSRPFY Trigger: ATAAAAAGGTCTGCTGCCTAAGAAACTGGCTTTCAAGTCTCTCCAACAATGCAGAGTTGGGATTTCAATGGTGAAAGAGAAATCCATGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | AGTTGCCTCTCCTGTGATCAACTTTCTGTTAAGGTGGTCTGGGTGTaGATAACCTTCTTTTACACACACTATCTTACTTCATCTCAAGTC | + |
Preference number: 1 (lower is better) Translates to: SCLSCDQLSVKVVWV*ITFFYTHYLTSSQV Trigger: GACTTGAGATGAAGTAAGATAGTGTGTGTAAAAGAAGGTTATCCACACCCAGACCACCTTAACAGAAAGTTGATCACAGGAGAGGCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | CTGGCTAGGTCATGCATTTGTTTATCCTTTTGTTTGTCCTTTGTGTaGCCCTTTCTCCCACCCTTTCTTAAGAAAAGACTCACAAACAAG | + |
Preference number: 1 (lower is better) Translates to: LARSCICLSFCLSFV*PFLPPFLKKRLTNK Trigger: CTTGTTTGTGAGTCTTTTCTTAAGAAAGGGTGGGAGAAAGGGCCACACAAAGGACAAACAAAAGGATAAACAAATGCATGACCTAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | ATTAATGTCACCAAAAATCTAATCACGGAGGCAGCTGTGTTTTGCTaGAAGGCCTCCAAACTACCTGACTCATGTCTTCCCTATGAAATA | + |
Preference number: 1 (lower is better) Translates to: INVTKNLITEAAVFC*KASKLPDSCLPYEI Trigger: TATTTCATAGGGAAGACATGAGTCAGGTAGTTTGGAGGCCTTTCAGCAAAACACAGCTGCCTCCGTGATTAGATTTTTGGTGACATTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | AGAGTCTTGGAGCAATTTGATGTGGCTCCTTTCCCGTTTCCCTTTTaGCTATATGGAACAAAGAAGATGCAAGATACAAAAAGAGCTGCA | + |
Preference number: 1 (lower is better) Translates to: RVLEQFDVAPFPFPF*LYGTKKMQDTKRAA Trigger: TGCAGCTCTTTTTGTATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCACATCAAATTGCTCCAAGACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 90 bp | TGCTCTGTAAATGGAGGGTTTGTAGATGGAATGCTGAACTTCAGCTaGAGTATTGGGTTACCAGACCTTTTAAATTCAGCTTTGAGTTCT | + |
Preference number: 1 (lower is better) Translates to: CSVNGGFVDGMLNFS*SIGLPDLLNSALSS Trigger: AGAACTCAAAGCTGAATTTAAAAGGTCTGGTAACCCAATACTGCAGCTGAAGTTCAGCATTCCATCTACAAACCCTCCATTTACAGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 90 bp | GCTATAGGAGAGATGACAGCAAGCAAGACTGGCTTGGTTTTTCTCTaGGTACCAAATTTCCCATTTGGGTACAATTACTTTATTTTAGGA | + |
Preference number: 1 (lower is better) Translates to: AIGEMTASKTGLVFL*VPNFPFGYNYFILG Trigger: TCCTAAAATAAAGTAATTGTACCCAAATGGGAAATTTGGTACTCAGAGAAAAACCAAGCCAGTCTTGCTTGCTGTCATCTCTCCTATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 90 bp | AAGCTGTTTTATTCTTTTGATTGGTATAGTTACTGTACATATTTATaGTGTGCATATCATGACCAAATCTGGGTCATAGGTTCTGGTTGG | + |
Preference number: 1 (lower is better) Translates to: KLFYSFDWYSYCTYL*CAYHDQIWVIGSGW Trigger: CCAACCAGAACCTATGACCCAGATTTGGTCATGATATGCACACCATAAATATGTACAGTAACTATACCAATCAAAAGAATAAAACAGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | CCTCCGACCAGCGAGGAGTACCTGTCAGTGGTGATGGAGGTCCTCTTTGCCTCTAGGGCGAGGTGCCTGTaGAGTGAATGTCCCCATGGG | + |
Preference number: 2 (lower is better) Translates to: PPTSEEYLSVVMEVLFASRARCL*SECPHG Trigger: CCCATGGGGACATTCACTTCACAGGCACCTCGCCCT...AGAGGCAAAGAGGACCTCCATCACCACTGACAGGTACTCCTCGCTGGTCGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | CCTCCGACCAGCGAGGAGTACCTGTCAGTGGTGATGGAGGTCCTCTTTGCCTCTCCAAGGAGGGATACTTaGCTCCCAGGGCTGTGCACA | + |
Preference number: 2 (lower is better) Translates to: PPTSEEYLSVVMEVLFASPRRDT*LPGLCT Trigger: TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGG...AGAGGCAAAGAGGACCTCCATCACCACTGACAGGTACTCCTCGCTGGTCGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCAGACTGCAAGGAGCCTaGAGCCCAGAGCCGGGAGGG | + |
Preference number: 2 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCRLQGA*SPEPGG Trigger: CCCTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCT...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | CCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTaGCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCA | + |
Preference number: 2 (lower is better) Translates to: PHGNPSFLQPSKEGY*PPRAVHKLPLLKTA Trigger: TGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGCCTCTTCTCAAGACTaGAAGGAGCCTGGAGCCCAG | + |
Preference number: 2 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLASSQD*KEPGAQ Trigger: CTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCGCCTCTTCTCAAGACTaGAAGGAGCCTGGAGCCCAG | + |
Preference number: 2 (lower is better) Translates to: SPWESILPPTFQGGILASASSQD*KEPGAQ Trigger: CTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGC...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAGCCTCTTCTCAAGACTaGAAGGAGCCTGGAGCCCAG | + |
Preference number: 2 (lower is better) Translates to: ILPPTFQGGILASQGCAQASSQD*KEPGAQ Trigger: CTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGC...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCGGGCTGTGCACAAGCTaGCTCTTCTCAAGACTGCAA | + |
Preference number: 2 (lower is better) Translates to: SPWESILPPTFQGGILASGLCTS*LFSRLQ Trigger: TTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCC...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGGGAATCAGTCTCTGGTaGGAGCCCATGCAAGTCCAC | + |
Preference number: 2 (lower is better) Translates to: LRTLGLHTACDRGMSLTLGISLW*EPMQVH Trigger: GTGGACTTGCATGGGCTCCCACCAGAGACTGATTCC...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGTTCCTGGCTTCCTGGTaGGGAGGGGACAGTAATGAT | + |
Preference number: 2 (lower is better) Translates to: LRTLGLHTACDRGMSLTLFLASW*GGDSND Trigger: ATCATTACTGTCCCCTCCTCACCAGGAAGCCAGGAA...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTGCAGCAGATAGGTGGTaGCTGCACCTCTCAGGGAGG | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAIAADRW*LHLSGR Trigger: CCTCCCTGAGAGGTGCAGGCACCACCTATCTGCTGC...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGAAAAGATGTGGGAATTaGCGGTGTAGGGGAGTTGGC | + |
Preference number: 2 (lower is better) Translates to: LRTLGLHTACDRGMSLTLKRCGN*RCRGVG Trigger: GCCAACTCCCCTACACCGCCAATTCCCACATCTTTT...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | GACTCTGCCGAATTCAACAGAAGCTCTGATGGACGGTCTGACTTTTaGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCA | + |
Preference number: 2 (lower is better) Translates to: DSAEFNRSSDGRSDF*RTLGLHTACDRGMS Trigger: TGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAAAAAGTCAGACCGTCCATCAGAGCTTCTGTTGAATTCGGCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACGACCATCCATGCTGTTaGTTTAAGATATGGCTTTTC | + |
Preference number: 2 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHDHPCC*FKIWLF Trigger: GAAAAGCCATATCTTAAACCAACAGCATGGATGGTC...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTCTAGCAGCAGATAGGTaGTGCCTGCACCTCTCAGGG | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAILAADR*CLHLSG Trigger: CCCTGAGAGGTGCAGGCACCACCTATCTGCTGCTAG...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | GAATTCAACAGAAGCTCTGATGGACGGTCTGACTTTTTGAGGACCTaGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTG | + |
Preference number: 2 (lower is better) Translates to: EFNRSSDGRSDFLRT*GLHTACDRGMSLTL Trigger: CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAAAAAGTCAGACCGTCCATCAGAGCTTCTGTTGAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | GTTTCAGGGTTGCCTAAGGCTATAGGAGAGATGACAGCAAGCAAGACTGGCTTGGCACAAACTGAAGGTTaGAGGTTGATGCCCCTCTTC | + |
Preference number: 2 (lower is better) Translates to: VSGLPKAIGEMTASKTGLAQTEG*RLMPLF Trigger: GAAGAGGGGCATCAACCTTCAACCTTCAGTTTGTGC...CAAGCCAGTCTTGCTTGCTGTCATCTCTCCTATAGCCTTAGGCAACCCTGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGAGGCTTCAGATATTCTaGATCATCTGCCGAGCTGAT | + |
Preference number: 2 (lower is better) Translates to: LRTLGLHTACDRGMSLTLRLQIF*IICRAD Trigger: ATCAGCTCGGCAGATGATGCAGAATATCTGAAGCCT...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTCTCTTGGCAGGACTTTaGACTGTGTGGGAGCCCTTG | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAILLAGL*TVWEPL Trigger: CAAGGGCTCCCACACAGTCCAAAGTCCTGCCAAGAG...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGGCTACCCTGCTGTGGTaGATTGTTCTAGGCTATTAT | + |
Preference number: 2 (lower is better) Translates to: LRTLGLHTACDRGMSLTLATLLW*IVLGYY Trigger: ATAATAGCCTAGAACAATCCACCACAGCAGGGTAGC...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATACAACAGGGACACTGCTaGCCATTCCCTACATTCTGT | + |
Preference number: 2 (lower is better) Translates to: NWRCRGVGQLSLVRSRYIQQGHC*PFPTFC Trigger: ACAGAATGTAGGGAATGGGCAGCAGTGTCCCTGTTG...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAGACCATCCATGCTGTTaGTTTAAGATATGGCTTTTC | + |
Preference number: 2 (lower is better) Translates to: ILPPTFQGGILASQGCAQDHPCC*FKIWLF Trigger: GAAAAGCCATATCTTAAACCAACAGCATGGATGGTC...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGCTCTTGGCAGGACTTTaGACTGTGTGGGAGCCCTTG | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQLLAGL*TVWEPL Trigger: CAAGGGCTCCCACACAGTCCAAAGTCCTGCCAAGAG...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | GTTTCAGGGTTGCCTAAGGCTATAGGAGAGATGACAGCAAGCAAGACTGGCTTGTTCCAGGACAACATATaGCCACATAGCCACACACTC | + |
Preference number: 2 (lower is better) Translates to: VSGLPKAIGEMTASKTGLFQDNI*PHSHTL Trigger: GAGTGTGTGGCTATGTGGCCATATGTTGTCCTGGAA...CAAGCCAGTCTTGCTTGCTGTCATCTCTCCTATAGCCTTAGGCAACCCTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | CCAGGATCTTCCAATCCTCCTGCCTCTACTTCCTCACTTCTCGGATaGCAGGTGTGCCATTATGCCTGGTTTGCGAGTCATATATGTTTT | + |
Preference number: 2 (lower is better) Translates to: PGSSNPPASTSSLLG*QVCHYAWFASHICF Trigger: AAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTAGAGGCAGGAGGATTGGAAGATCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAGCCTCTTCTCAAGACTaGAAGGAGCCTGGAGCCCAG | + |
Preference number: 2 (lower is better) Translates to: GGKGLELLNIYTVTIAGRASSQD*KEPGAQ Trigger: CTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGC...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATACCAAGGAGGGATACTTaGCTCCCAGGGCTGTGCACA | + |
Preference number: 2 (lower is better) Translates to: WLLSRFPFDYMEQRRCKIPRRDT*LPGLCT Trigger: TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGG...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | GAAGCAAAGAGACAGCGGTCTCATATTCTTCTCCCATGCCTCTTGTaGCATATTTTTACTTCTCTGAAAGCAACAGGGACACTGCTGCCC | + |
Preference number: 2 (lower is better) Translates to: EAKRQRSHILLPCLL*HIFTSLKATGTLLP Trigger: GGGCAGCAGTGTCCCTGTTGCTTTCAGAGAAGTAAAAATATGCAACAAGAGGCATGGGAGAAGAATATGAGACCGCTGTCTCTTTGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | CAGACAACCAACTCCCATTGGATCCGTATTCAAGTCTACTGGTCCTaGGAAGGTATTTGCACTACTGTGCACCTCTGTGGTTACAGATTC | + |
Preference number: 2 (lower is better) Translates to: QTTNSHWIRIQVYWS*EGICTTVHLCGYRF Trigger: GAATCTGTAACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTTGAATACGGATCCAATGGGAGTTGGTTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | GGACTCATAACAAGGGTCTCTCCAGTCCTTTCTCTGACTTCCCATTaGAAATGTTTTCCTCCCAGGATCAATGTAGGCAAGCACACACAC | + |
Preference number: 2 (lower is better) Translates to: GLITRVSPVLSLTSH*KCFPPRINVGKHTH Trigger: GTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAACATTTCAAATGGGAAGTCAGAGAAAGGACTGGAGAGACCCTTGTTATGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | CTACTTCCTCACTTCTCGGATTGCAGGTGTGCCATTATGCCTGGTTaGCGAGTCATATATGTTTTCATGCACCTCTCTGTGTCTGCATTG | + |
Preference number: 2 (lower is better) Translates to: LLPHFSDCRCAIMPG*RVIYVFMHLSVSAL Trigger: CAATGCAGACACAGAGAGGTGCATGAAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGTTCCAGATGGGGTTATaGTGGGAGGCAGGATACAGA | + |
Preference number: 2 (lower is better) Translates to: SSSLTVKSDALCFGIPSVFQMGL*WEAGYR Trigger: TCTGTATCCTGCCTCCCATCATAACCCCATCTGGAA...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATATGGACTCTGCCCTGCTaGCTCTCCCTGGCATGTTTA | + |
Preference number: 2 (lower is better) Translates to: WLLSRFPFDYMEQRRCKIWTLPC*LSLACL Trigger: TAAACATGCCAGGGAGAGTCAGCAGGGCAGAGTCCA...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTGAGCACATCTGTGATTaGACAGAGGTCTATGTCCTC | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAIEHICD*TEVYVL Trigger: GAGGACATAGACCTCTGTGCAATCACAGATGTGCTC...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGGACCATCCATGCTGTTaGTTTAAGATATGGCTTTTC | + |
Preference number: 2 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLDHPCC*FKIWLF Trigger: GAAAAGCCATATCTTAAACCAACAGCATGGATGGTC...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACGACCATCCATGCTGTTaGTTTAAGATATGGCTTTTC | + |
Preference number: 2 (lower is better) Translates to: SECPHGNPSFLQPSKEGYDHPCC*FKIWLF Trigger: GAAAAGCCATATCTTAAACCAACAGCATGGATGGTC...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGACCCTTATGTTCCCATTaGGTGGCAACCCCCACTGAG | + |
Preference number: 2 (lower is better) Translates to: IECFFWNRPAVCNLLLVGPLCSH*VATPTE Trigger: CTCAGTGGGGGTTGCCACCCAATGGGAACATAAGGG...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTGTTTGTCCTTTGTGTaGCCCTTTCTCCCACCCTTT | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAICLSFV*PFLPPF Trigger: AAAGGGTGGGAGAAAGGGCCACACAAAGGACAAACA...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | GGAGAAGCAAAGAGACAGCGGTCTCATATTCTTCTCCCATGCCTCTaGTTGCATATTTTTACTTCTCTGAAAGCAACAGGGACACTGCTG | + |
Preference number: 2 (lower is better) Translates to: GEAKRQRSHILLPCL*LHIFTSLKATGTLL Trigger: CAGCAGTGTCCCTGTTGCTTTCAGAGAAGTAAAAATATGCAACAAGAGGCATGGGAGAAGAATATGAGACCGCTGTCTCTTTGCTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGCCTTGTCACCCAGTCTaGATGTCATCTGTCTTATGG | + |
Preference number: 2 (lower is better) Translates to: SSSLTVKSDALCFGIPSVPCHPV*MSSVLW Trigger: CCATAAGACAGATGACATTCAGACTGGGTGACAAGG...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGCGTCCTGCTCTCATCTaGGCAGCCAGGACAAGAATC | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKRPALI*AARTRI Trigger: GATTCTTGTCCTGGCTGCTCAGATGAGAGCAGGACG...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGATTCCTGGCTTCCTGGTaGGGAGGGGACAGTAATGAT | + |
Preference number: 2 (lower is better) Translates to: GGKGLELLNIYTVTIAGRFLASW*GGDSND Trigger: ATCATTACTGTCCCCTCCTCACCAGGAAGCCAGGAA...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGATTCAGCTTTGAGTTCTaGATCCTGCCTGCGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: GGKGLELLNIYTVTIAGRFSFEF*ILPASL Trigger: CAGGGACGCAGGCAGGATGCAGAACTCAAAGCTGAA...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATATCTGGTGGGAGCCCATaGAAGTCCACAGCATTCCTT | + |
Preference number: 2 (lower is better) Translates to: WLLSRFPFDYMEQRRCKISGGSP*KSTAFL Trigger: AAGGAATGCTGTGGACTTGCATGGGCTCCCACCAGA...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGCACCATGAAGTCCATTaGTTTTGCTTGTCCTCCCAG | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQHHEVH*FCLSSQ Trigger: CTGGGAGGACAAGCAAAAGCAATGGACTTCATGGTG...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGCCCTTATGTTCCCATTaGGTGGCAACCCCCACTGAG | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKPLCSH*VATPTE Trigger: CTCAGTGGGGGTTGCCACCCAATGGGAACATAAGGG...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATATGTCTCCACTGTGCTTaGAATGCTAAAGTTCCAGAT | + |
Preference number: 2 (lower is better) Translates to: NWRCRGVGQLSLVRSRYICLHCA*NAKVPD Trigger: ATCTGGAACTTTAGCATTCCAAGCACAGTGGAGACA...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATATTGTCTGTCAGCAGACCCAGTAGACTTGCACACACTGCCATGCAAGAAAGACCAACTCTGCATTGTTaGAGAGACTTGAAAGCCAGT | + |
Preference number: 2 (lower is better) Translates to: ILSVSRPSRLAHTAMQERPTLHC*RDLKAS Trigger: ACTGGCTTTCAAGTCTCTCCAACAATGCAGAGTTGG...TCTTTCTTGCATGGCAGTGTGTGCAAGTCTACTGGGTCTGCTGACAGACAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGTTCCAGGACAACATATaGCCACATAGCCACACACTC | + |
Preference number: 2 (lower is better) Translates to: SSSLTVKSDALCFGIPSVFQDNI*PHSHTL Trigger: GAGTGTGTGGCTATGTGGCCATATGTTGTCCTGGAA...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGGGTCCAGAGGGCAGGTaGATGTGTCATGGACACTCT | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKGPEGR*MCHGHS Trigger: AGAGTGTCCATGACACATCCACCTGCCCTCTGGACC...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGCATCCCATCAGAGACTaGCCAGGTCCAGAGGGCAGG | + |
Preference number: 2 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGHPIRD*PGPEGR Trigger: CCTGCCCTCTGGACCTGGCCAGTCTCTGATGGGATG...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGTTGGATGGACTCTTCTaGCAGCGTCAAACATTGACC | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQLDGLF*QRQTLT Trigger: GGTCAATGTTTGACGCTGCCAGAAGAGTCCATCCAA...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | CTATATGGAACAAAGAAGATGCAAGATACAAAAAGAGCTGCAACCTaGACCTCACTGGCCCTCTATGATAATGCTGTGCCCAGTGCTCAT | + |
Preference number: 2 (lower is better) Translates to: LYGTKKMQDTKRAAT*TSLALYDNAVPSAH Trigger: ATGAGCACTGGGCACAGCATTATCATAGAGGGCCAGTGAGGTCAAGGTTGCAGCTCTTTTTGTATCTTGCATCTTCTTTGTTCCATATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGATTCCAGATGGGGTTATaGTGGGAGGCAGGATACAGA | + |
Preference number: 2 (lower is better) Translates to: GGKGLELLNIYTVTIAGRFQMGL*WEAGYR Trigger: TCTGTATCCTGCCTCCCATCATAACCCCATCTGGAA...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTCTATGATAATGCTGTaGCCAGTGCTCATCTTGACA | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAISMIML*PVLILT Trigger: TGTCAAGATGAGCACTGGGCACAGCATTATCATAGA...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR GCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGATCTTCCAATCCTCCTaGCTCTACTTCCTCACTTCT | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQIFQSS*LYFLTS Trigger: AGAAGTGAGGAAGTAGAGGCAGGAGGATTGGAAGAT...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTGTCTCCACTGTGCTTaGAATGCTAAAGTTCCAGAT | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAICLHCA*NAKVPD Trigger: ATCTGGAACTTTAGCATTCCAAGCACAGTGGAGACA...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGAGTGGGAGCTGGCTTTaGGAATGTTGTCTTCTCAAA | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQSGSWL*ECCLLK Trigger: TTTGAGAAGACAACATTCCCAAAGCCAGCTCCCACT...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGAGTGGGAGCTGGCTTTaGGAATGTTGTCTTCTCAAA | + |
Preference number: 2 (lower is better) Translates to: SSSLTVKSDALCFGIPSVSGSWL*ECCLLK Trigger: TTTGAGAAGACAACATTCCCAAAGCCAGCTCCCACT...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTCTGTTAAGGTGGTCTaGGTGTGGATAACCTTCTTT | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAISVKVV*VWITFF Trigger: AAAGAAGGTTATCCACACCCAGACCACCTTAACAGA...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGTACAGGGTCCTACAGTaGCAACTTTTAACCATGTCA | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQYRVLQ*QLLTMS Trigger: TGACATGGTTAAAAGTTGCCACTGTAGGACCCTGTA...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGACAACCAACTCCCATTaGATCCGTATTCAAGTCTAC | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQTTNSH*IRIQVY Trigger: GTAGACTTGAATACGGATCCAATGGGAGTTGGTTGT...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR TCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTCATTGTACAATAATTTaGGCCCATGTGCCTAAACTT | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAIHCTII*AHVPKL Trigger: AAGTTTAGGCACATGGGCTCAAATTATTGTACAATG...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGAAAGAGCTGCAACCTTaGCCTCACTGGCCCTCTATG | + |
Preference number: 2 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGKELQP*PHWPSM Trigger: CATAGAGGGCCAGTGAGGTCAAGGTTGCAGCTCTTT...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGGAGCACATCTGTGATTaGACAGAGGTCTATGTCCTC | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKEHICD*TEVYVL Trigger: GAGGACATAGACCTCTGTGCAATCACAGATGTGCTC...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTTGATAAATGGGGCATaGATTTCTCTTTCACCATTG | + |
Preference number: 2 (lower is better) Translates to: FSSQDQCRQAHTQSLGAILINGA*ISLSPL Trigger: CAATGGTGAAAGAGAAATCCATGCCCCATTTATCAA...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | AAAACATGTCAGATGACAATCATGGCTAAGATTGCCCTTGTTCTTTaGATGATAATGGGCCGTGCACTGGAACATGATAGGTTCAGTTTC | + |
Preference number: 2 (lower is better) Translates to: KTCQMTIMAKIALVL*MIMGRALEHDRFSF Trigger: GAAACTGAACCTATCATGTTCCAGTGCACGGCCCATTATCATCAAAAGAACAAGGGCAATCTTAGCCATGATTGTCATCTGACATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATATTGATTGTCTATGTGTaGGAAAGGCATGTGGATGCA | + |
Preference number: 2 (lower is better) Translates to: WLLSRFPFDYMEQRRCKILIVYV*ERHVDA Trigger: TGCATCCACATGCCTTTCTCACACATAGACAATCAA...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGACAGGTGGATGTGTCATaGACACTCTCAAATTCGAAT | + |
Preference number: 2 (lower is better) Translates to: GGKGLELLNIYTVTIAGRQVDVS*TLSNSN Trigger: ATTCGAATTTGAGAGTGTCCATGACACATCCACCTG...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATAAAGTCTACTGGTCCTTaGAAGGTATTTGCACTACTG | + |
Preference number: 2 (lower is better) Translates to: WLLSRFPFDYMEQRRCKIKSTGP*KVFALL Trigger: CAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTT...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 90 bp | TTCTCTTTCACCATTGAAATCCCAACTCTGCATTGTTGGAGAGACTaGAAAGCCAGTTTCTTAGGCAGCAGACCTTTTTATTTCTTGTGT | + |
Preference number: 2 (lower is better) Translates to: FSFTIEIPTLHCWRD*KASFLGSRPFYFLC Trigger: ACACAAGAAATAAAAAGGTCTGCTGCCTAAGAAACTGGCTTTCAAGTCTCTCCAACAATGCAGAGTTGGGATTTCAATGGTGAAAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGGTTACAGATTCTGCCTaGCATCCAACAGCAATTAGA | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKVTDSA*HPTAIR Trigger: TCTAATTGCTGTTGGATGGCAGGCAGAATCTGTAAC...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGGAGTCCCAATCTTTCTaGGTGCAAGGAAGAATAGAA | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKESQSF*VQGRIE Trigger: TTCTATTCTTCCTTGCACCCAGAAAGATTGGGACTC...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGACAACCAACTCCCATTaGATCCGTATTCAAGTCTAC | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKTTNSH*IRIQVY Trigger: GTAGACTTGAATACGGATCCAATGGGAGTTGGTTGT...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGCCAAACAGAAGATCTTaGGCACAGTTTTATACTTAT | + |
Preference number: 2 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQPNRRS*AQFYTY Trigger: ATAAGTATAAAACTGTGCCCAAGATCTTCTGTTTGG...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGCCTGTCAGAGGCCTTTaGAAAAGCATTTTCCTTGAC | + |
Preference number: 2 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGPVRGL*KSIFLD Trigger: GTCAAGGAAAATGCTTTTTCAAAGGCCTCTGACAGG...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAACCCAAAGTGCCAAGTaGTATGAGAGAAATAGCTCG | + |
Preference number: 2 (lower is better) Translates to: GKGLELLNIYTVTIAGRKTQSAK*YERNSS Trigger: CGAGCTATTTCTCTCATATCACTTGGCACTTTGGGT...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGCGAAATTCTCTGAAATaGTTCATTCAGACAGGCATC | + |
Preference number: 2 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKRNSLK*FIQTGI Trigger: GATGCCTGTCTGAATGAAGCATTTCAGAGAATTTCG...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATATTGATAAATGGGGCATaGATTTCTCTTTCACCATTG | + |
Preference number: 2 (lower is better) Translates to: WLLSRFPFDYMEQRRCKILINGA*ISLSPL Trigger: CAATGGTGAAAGAGAAATCCATGCCCCATTTATCAA...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR GCA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGGTATTTGCACTACTGTaGACCTCTGTGGTTACAGAT | + |
Preference number: 2 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGVFALL*TSVVTD Trigger: ATCTGTAACCACAGAGGTGCACAGTAGTGCAAATAC...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CCA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGCAAGCAAGACTGGCTTaGTTTTTCTCTGAGTACCAA | + |
Preference number: 2 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGQARLA*FFSEYQ Trigger: TTGGTACTCAGAGAAAAACCAAGCCAGTCTTGCTTG...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAATTTCTCTTTCACCATTaGAATCCCAACTCTGCATTG | + |
Preference number: 2 (lower is better) Translates to: GKGLELLNIYTVTIAGRKFLFHH*NPNSAL Trigger: CAATGCAGAGTTGGGATTTCAATGGTGAAAGAGAAA...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR TCA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAGGCTTGGTTTTTCTCTaGGTACCAAATTTCCCATTT | + |
Preference number: 2 (lower is better) Translates to: GKGLELLNIYTVTIAGRKGLVFL*VPNFPF Trigger: AAATGGGAAATTTGGTACTCAGAGAAAAACCAAGCC...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 72 bp | GGGTGGCAACCCCCACTGAGCACCTCTGCTGGACGGTaGTTTTCAGCACACATCTCAGCGCTCTTGGCAGGA | + |
Preference number: 3 (lower is better) Translates to: GWQPPLSTSAGR*FSAHISALLAG Trigger: TCCTGCCAAGAGCGCTGAGATGTGTGCTGAAAATCACCGTCCAGCAGAGGTGCTCAGTGGGGGTTGCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | TGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTaGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTT | + |
Preference number: 3 (lower is better) Translates to: CTSCLFSRLQGA*SPEPGGTIHAV Trigger: AACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | TCCCATTGGGTGGCAACCCCCACTGAGCACCTCTGCTaGACGGTGATTTTCAGCACACATCTCAGCGCTCTT | + |
Preference number: 3 (lower is better) Translates to: SHWVATPTEHLC*TVIFSTHLSAL Trigger: AAGAGCGCTGAGATGTGTGCTGAAAATCACCGTCCAGCAGAGGTGCTCAGTGGGGGTTGCCACCCAATGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 72 bp | ACGTACCTCCGACCAGCGAGGAGTACCTGTCAGTGGTaGTGGAGGTCCTCTTTGCCTCTTACACGGAGTCAT | + |
Preference number: 3 (lower is better) Translates to: TYLRPARSTCQW*WRSSLPLTRSH Trigger: ATGACTCCGTGTAAGAGGCAAAGAGGACCTCCATCACCACTGACAGGTACTCCTCGCTGGTCGGAGGTACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | CCAGCAACAGATTCTCCCAGTGGAATCAGTCTCTGGTaGGAGCCCATGCAAGTCCACAGCATTCCTTCATCC | + |
Preference number: 3 (lower is better) Translates to: PATDSPSGISLW*EPMQVHSIPSS Trigger: GGATGAAGGAATGCTGTGGACTTGCATGGGCTCCCACCAGAGACTGATTCCACTGGGAGAATCTGTTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | GGGCTTGCTCTGCCTGCTGTTGCCCTGCTCTGTAAATaGAGGGTTTGTAGATGGAATGCTGAACTTCAGCTG | + |
Preference number: 3 (lower is better) Translates to: GLALPAVALLCK*RVCRWNAELQL Trigger: CAGCTGAAGTTCAGCATTCCATCTACAAACCCTCCATTTACAGAGCAGGGCAACAGCAGGCAGAGCAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | CAACCAGCAACAGATTCTCCCAGTGGAATCAGTCTCTaGTGGGAGCCCATGCAAGTCCACAGCATTCCTTCA | + |
Preference number: 3 (lower is better) Translates to: QPATDSPSGISL*WEPMQVHSIPS Trigger: TGAAGGAATGCTGTGGACTTGCATGGGCTCCCACCAGAGACTGATTCCACTGGGAGAATCTGTTGCTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGCCCAACTCTGCATTGTaGGAGAGACTTGAAAGCCAG | + |
Preference number: 3 (lower is better) Translates to: LRTLGLHTACDRGMSLTLPNSAL*ERLESQ Trigger: CTGGCTTTCAAGTCTCTCCAACAATGCAGAGTTGGG...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 72 bp | AGACAGTGGAACATGGAAGGAAACCCTTTACCAGAGTaGGACCACGTGACCCAAGCACACCACTCCAAACAG | + |
Preference number: 3 (lower is better) Translates to: RQWNMEGNPLPE*DHVTQAHHSKQ Trigger: CTGTTTGGAGTGGTGTGCTTGGGTCACGTGGTCTCACTCTGGTAAAGGGTTTCCTTCCATGTTCCACTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 72 bp | CCAATCCTCCTGCCTCTACTTCCTCACTTCTCGGATTaGAGGTGTGCCATTATGCCTGGTTTGCGAGTCATA | + |
Preference number: 3 (lower is better) Translates to: PILLPLLPHFSD*RCAIMPGLRVI Trigger: TATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTAGAGGCAGGAGGATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | AACACCATTAATCTGATGCTTCATCCCATCAGAGACTaGCCAGGTCCAGAGGGCAGGTGGATGTGTCATGGA | + |
Preference number: 3 (lower is better) Translates to: NTINLMLHPIRD*PGPEGRWMCHG Trigger: TCCATGACACATCCACCTGCCCTCTGGACCTGGCCAGTCTCTGATGGGATGAAGCATCAGATTAATGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 72 bp | AATTCAACAGAAGCTCTGATGGACGGTCTGACTTTTTaGGGACCTTGGGCCTCCACACAGCCTGTGATAGAG | + |
Preference number: 3 (lower is better) Translates to: NSTEALMDGLTF*GPWASTQPVIE Trigger: CTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAAAAAGTCAGACCGTCCATCAGAGCTTCTGTTGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 72 bp | ACATGGAAGGAAACCCTTTACCAGAGTGAGACCACGTaGCCCAAGCACACCACTCCAAACAGCCTATGTACA | + |
Preference number: 3 (lower is better) Translates to: TWKETLYQSETT*PKHTTPNSLCT Trigger: TGTACATAGGCTGTTTGGAGTGGTGTGCTTGGGTCACGTGGTCTCACTCTGGTAAAGGGTTTCCTTCCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | GAGGTTGATTGTCTATGTGTGAGAAAGGCATGTGGATaGATGCTGTCTGGGCAGTCTACATGGGAAGCAAGC | + |
Preference number: 3 (lower is better) Translates to: EVDCLCVRKACG*MLSGQSTWEAS Trigger: GCTTGCTTCCCATGTAGACTGCCCAGACAGCATGCATCCACATGCCTTTCTCACACATAGACAATCAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | AGATCCAAAGGCAGTAAACTGAACTCAGACAGACACTaGGGCAAGGCACAGGTACCTTTCTTTCCTGAGTCC | + |
Preference number: 3 (lower is better) Translates to: RSKGSKLNSDRH*GKAQVPFFPES Trigger: GGACTCAGGAAAGAAAGGTACCTGTGCCTTGCCCCAGTGTCTGTCTGAGTTCAGTTTACTGCCTTTGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | CTTTGTACTTTAGCAACCAGCAACAGATTCTCCCAGTaGAATCAGTCTCTGGTGGGAGCCCATGCAAGTCCA | + |
Preference number: 3 (lower is better) Translates to: LCTLATSNRFSQ*NQSLVGAHASP Trigger: TGGACTTGCATGGGCTCCCACCAGAGACTGATTCCACTGGGAGAATCTGTTGCTGGTTGCTAAAGTACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTCCATGACACAGGACTaGGAAACTGTTCTGGGGTGG | + |
Preference number: 3 (lower is better) Translates to: FSSQDQCRQAHTQSLGAISMTQD*ETVLGW Trigger: CCACCCCAGAACAGTTTCCAAGTCCTGTGTCATGGA...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATAAGACCTTTTTATTTCTaGTGTCCTCAGGGGGCCTCC | + |
Preference number: 3 (lower is better) Translates to: NWRCRGVGQLSLVRSRYIRPFYF*CPQGAS Trigger: GGAGGCCCCCTGAGGACACAAGAAATAAAAAGGTCT...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGATGATCAGTGGTCCTTaGTACTTTAGCAACCAGCAA | + |
Preference number: 3 (lower is better) Translates to: LRTLGLHTACDRGMSLTLMISGP*YFSNQQ Trigger: TTGCTGGTTGCTAAAGTACAAAGGACCACTGATCAT...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | GATACAGATGTTGTACGGATCTACAGACCAAATCCATaGCACAGGACTTGGAAACTGTTCTGGGGTGGGGGT | + |
Preference number: 3 (lower is better) Translates to: DTDVVRIYRPNP*HRTWKLFWGGG Trigger: ACCCCCACCCCAGAACAGTTTCCAAGTCCTGTGTCATGGATTTGGTCTGTAGATCCGTACAACATCTGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | GTAGACACTGCAGCCCTTTGTGACTGCACTGAAAAATaGTCTAAGGAGCTATGCCCTTATGTTCCCATTGGG | + |
Preference number: 3 (lower is better) Translates to: VDTAALCDCTEK*SKELCPYVPIG Trigger: CCCAATGGGAACATAAGGGCATAGCTCCTTAGAGCATTTTTCAGTGCAGTCACAAAGGGCTGCAGTGTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | GCACTACTGTGCACCTCTGTGGTTACAGATTCTGCCTaGCATCCAACAGCAATTAGAGTGCACTTCTTCAAG | + |
Preference number: 3 (lower is better) Translates to: ALLCTSVVTDSA*HPTAIRVHFFK Trigger: CTTGAAGAAGTGCACTCTAATTGCTGTTGGATGGCAGGCAGAATCTGTAACCACAGAGGTGCACAGTAGTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | AAGTCTACTGGTCCTTGGAAGGTATTTGCACTACTGTaGACCTCTGTGGTTACAGATTCTGCCTGCCATCCA | + |
Preference number: 3 (lower is better) Translates to: KSTGPWKVFALL*TSVVTDSACHP Trigger: TGGATGGCAGGCAGAATCTGTAACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | GCTGTTGCCCTGCTCTGTAAATGGAGGGTTTGTAGATaGAATGCTGAACTTCAGCTGCAGTATTGGGTTACC | + |
Preference number: 3 (lower is better) Translates to: AVALLCKWRVCR*NAELQLQYWVT Trigger: GGTAACCCAATACTGCAGCTGAAGTTCAGCATTCCATCTACAAACCCTCCATTTACAGAGCAGGGCAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | AGACTGGCCAGGTCCAGAGGGCAGGTGGATGTGTCATaGACACTCTCAAATTCGAATCTAGGAGTTTCTATT | + |
Preference number: 3 (lower is better) Translates to: RLARSRGQVDVS*TLSNSNLGVSI Trigger: AATAGAAACTCCTAGATTCGAATTTGAGAGTGTCCATGACACATCCACCTGCCCTCTGGACCTGGCCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | TCTATGTGTGAGAAAGGCATGTGGATGCATGCTGTCTaGGCAGTCTACATGGGAAGCAAGCTACTTCCAGAT | + |
Preference number: 3 (lower is better) Translates to: SMCEKGMWMHAV*AVYMGSKLLPD Trigger: ATCTGGAAGTAGCTTGCTTCCCATGTAGACTGCCCAGACAGCATGCATCCACATGCCTTTCTCACACATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGTCCAAGGAGGGATACTaGCCTCCCAGGGCTGTGCAC | + |
Preference number: 3 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKSKEGY*PPRAVH Trigger: GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGA...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATAACTGTGTGGGAGCCCTaGGCATTAAAACATGTCAGA | + |
Preference number: 3 (lower is better) Translates to: NWRCRGVGQLSLVRSRYITVWEP*ALKHVR Trigger: TCTGACATGTTTTAATGCCAAGGGCTCCCACACAGT...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | ATGAGATGGTCCTTGTCTCTTTTTATGACACCCGAGTaGGGCTTCAGATATTCTGCATCATCTGCCGAGCTG | + |
Preference number: 3 (lower is better) Translates to: MRWSLSLFMTPE*GFRYSASSAEL Trigger: CAGCTCGGCAGATGATGCAGAATATCTGAAGCCTCACTCGGGTGTCATAAAAAGAGACAAGGACCATCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | ACCAAAAATCTAATCACGGAGGCAGCTGTGTTTTGCTaGAAGGCCTCCAAACTACCTGACTCATGTCTTCCC | + |
Preference number: 3 (lower is better) Translates to: TKNLITEAAVFC*KASKLPDSCLP Trigger: GGGAAGACATGAGTCAGGTAGTTTGGAGGCCTTTCAGCAAAACACAGCTGCCTCCGTGATTAGATTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | CTGTCAGCAGACCCAGTAGACTTGCACACACTGCCATaGAAGAAAGAAATTGGAGATGACCTAAGTCTATCC | + |
Preference number: 3 (lower is better) Translates to: LSADPVDLHTLP*KKEIGDDLSLS Trigger: GGATAGACTTAGGTCATCTCCAATTTCTTTCTTGCATGGCAGTGTGTGCAAGTCTACTGGGTCTGCTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | CCTGCCTCTACTTCCTCACTTCTCGGATTGCAGGTGTaGCATTATGCCTGGTTTGCGAGTCATATATGTTTT | + |
Preference number: 3 (lower is better) Translates to: PASTSSLLGLQV*HYAWFASHICF Trigger: AAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGTGAGGAAGTAGAGGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | CCCAAGCACACCACTCCAAACAGCCTATGTACAGTTTaGCATCCGAATTCCAGTTATGTACAGACAGAGTCA | + |
Preference number: 3 (lower is better) Translates to: PKHTTPNSLCTV*HPNSSYVQTES Trigger: TGACTCTGTCTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGTGTGCTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | GTCCTTGGAAGGTATTTGCACTACTGTGCACCTCTGTaGTTACAGATTCTGCCTGCCATCCAACAGCAATTA | + |
Preference number: 3 (lower is better) Translates to: VLGRYLHYCAPL*LQILPAIQQQL Trigger: TAATTGCTGTTGGATGGCAGGCAGAATCTGTAACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | ACTCCCATTGGATCCGTATTCAAGTCTACTGGTCCTTaGAAGGTATTTGCACTACTGTGCACCTCTGTGGTT | + |
Preference number: 3 (lower is better) Translates to: TPIGSVFKSTGP*KVFALLCTSVV Trigger: AACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTTGAATACGGATCCAATGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | ACAACCAACTCCCATTGGATCCGTATTCAAGTCTACTaGTCCTTGGAAGGTATTTGCACTACTGTGCACCTC | + |
Preference number: 3 (lower is better) Translates to: TTNSHWIRIQVY*SLEGICTTVHL Trigger: GAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTTGAATACGGATCCAATGGGAGTTGGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGACAGGGGGCCTCCACTTaGAAGTGCCTTTTGCTTAAG | + |
Preference number: 3 (lower is better) Translates to: GGKGLELLNIYTVTIAGRQGAST*KCLLLK Trigger: CTTAAGCAAAAGGCACTTCAAAGTGGAGGCCCCCTG...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ATATTGTCTGTCAGCAGACCCAGTAGACTTGCACACACTGCCATGCAAGAAAGAAATCCCAACTCTGCATaGTTGGAGAGACTTGAAAGC | + |
Preference number: 3 (lower is better) Translates to: ILSVSRPSRLAHTAMQERNPNSA*LERLES Trigger: GCTTTCAAGTCTCTCCAACAATGCAGAGTTGGGATT...TCTTTCTTGCATGGCAGTGTGTGCAAGTCTACTGGGTCTGCTGACAGACAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | ACTGTGCTTGGAATGCTAAAGTTCCAGATGGGGTTATaGTGGGAGGCAGGATACAGATGTTGTACGGATCTA | + |
Preference number: 3 (lower is better) Translates to: TVLGMLKFQMGL*WEAGYRCCTDL Trigger: TAGATCCGTACAACATCTGTATCCTGCCTCCCATCATAACCCCATCTGGAACTTTAGCATTCCAAGCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | CAAAGAAGATGCAAGATACAAAAAGAGCTGCAACCTTaGCCTCACTGGCCCTCTATGATAATGCTGTGCCCA | + |
Preference number: 3 (lower is better) Translates to: QRRCKIQKELQP*PHWPSMIMLCP Trigger: TGGGCACAGCATTATCATAGAGGGCCAGTGAGGTCAAGGTTGCAGCTCTTTTTGTATCTTGCATCTTCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | TGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTTaGTGTGGCTCCTTTCCCGTTTCCCTTTTGACTATA | + |
Preference number: 3 (lower is better) Translates to: CRQAHTQSLGAI*CGSFPVSLLTI Trigger: TATAGTCAAAAGGGAAACGGGAAAGGAGCCACATCAAATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | ACCAACCAGAAATCAGAATGTATCCAACAATCGTCCTaGTCTCATCTGAGCAGCCAGGACAAGAATCTGAGA | + |
Preference number: 3 (lower is better) Translates to: TNQKSECIQQSS*SHLSSQDKNLR Trigger: TCTCAGATTCTTGTCCTGGCTGCTCAGATGAGAGCAGGACGATTGTTGGATACATTCTGATTTCTGGTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | ACTTCTCGGATTGCAGGTGTGCCATTATGCCTGGTTTaGGAGTCATATATGTTTTCATGCACCTCTCTGTGT | + |
Preference number: 3 (lower is better) Translates to: TSRIAGVPLCLV*ESYMFSCTSLC Trigger: ACACAGAGAGGTGCATGAAAACATATATGACTCGCAAACCAGGCATAATGGCACACCTGCAATCCGAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | GGGGCTTACATAGATGACCTAGCTACCCTGCTGTGGTaGATTGTTCTAGGCTATTATGTGCCCTTTAGTAAT | + |
Preference number: 3 (lower is better) Translates to: GAYIDDLATLLW*IVLGYYVPFSN Trigger: ATTACTAAAGGGCACATAATAGCCTAGAACAATCCACCACAGCAGGGTAGCTAGGTCATCTATGTAAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGGCTCTTGGCAGGACTTaGGACTGTGTGGGAGCCCTT | + |
Preference number: 3 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGALGRT*DCVGAL Trigger: AAGGGCTCCCACACAGTCCAAAGTCCTGCCAAGAGC...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGATCTCCTGTTTCAGGGTaGCCTAAGGCTATAGGAGAG | + |
Preference number: 3 (lower is better) Translates to: GGKGLELLNIYTVTIAGRSPVSG*PKAIGE Trigger: CTCTCCTATAGCCTTAGGCAACCCTGAAACAGGAGA...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | TGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTaGCTCTGCATTCAGATATTTTTCTTTAGGACAAGT | + |
Preference number: 3 (lower is better) Translates to: WASTQPVIEECH*LCIQIFFFRTS Trigger: ACTTGTCCTAAAGAAAAATATCTGAATGCAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | AATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTaGTACTTGTTGGAGTCCCAATCTTTCTGGGTGCAA | + |
Preference number: 3 (lower is better) Translates to: NAFSGTDLLSVT*YLLESQSFWVQ Trigger: TTGCACCCAGAAAGATTGGGACTCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | AGGACTGCGTTGATCTCTCAAAGCCTGGCTAGGTCATaGATTTGTTTATCCTTTTGTTTGTCCTTTGTGTGG | + |
Preference number: 3 (lower is better) Translates to: RTALISQSLARS*ICLSFCLSFVW Trigger: CCACACAAAGGACAAACAAAAGGATAAACAAATGCATGACCTAGCCAGGCTTTGAGAGATCAACGCAGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | AAGAAACGATGGAACATGTACTGTCTCCACTGTGCTTaGAATGCTAAAGTTCCAGATGGGGTTATGATGGGA | + |
Preference number: 3 (lower is better) Translates to: KKRWNMYCLHCA*NAKVPDGVMMG Trigger: TCCCATCATAACCCCATCTGGAACTTTAGCATTCCAAGCACAGTGGAGACAGTACATGTTCCATCGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | TCTGTAACTTGCTACTTGTTGGAGTCCCAATCTTTCTaGGTGCAAGGAAGAATAGAATTTGTGTGTGTGCCC | + |
Preference number: 3 (lower is better) Translates to: SVTCYLLESQSF*VQGRIEFVCVP Trigger: GGGCACACACACAAATTCTATTCTTCCTTGCACCCAGAAAGATTGGGACTCCAACAAGTAGCAAGTTACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGCTGGCTTTGGGAATGTaGTCTTCTCAAAGCAACTTT | + |
Preference number: 3 (lower is better) Translates to: SSSLTVKSDALCFGIPSVLALGM*SSQSNF Trigger: AAAGTTGCTTTGAGAAGACAACATTCCCAAAGCCAG...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGCTGGCTTTGGGAATGTaGTCTTCTCAAAGCAACTTT | + |
Preference number: 3 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQLALGM*SSQSNF Trigger: AAAGTTGCTTTGAGAAGACAACATTCCCAAAGCCAG...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGCTCCCATGCCTCTTGTaGCATATTTTTACTTCTCTG | + |
Preference number: 3 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQLPCLL*HIFTSL Trigger: CAGAGAAGTAAAAATATGCAACAAGAGGCATGGGAG...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGTCTGTAACTTGCTACTaGTTGGAGTCCCAATCTTTC | + |
Preference number: 3 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQSVTCY*LESQSF Trigger: GAAAGATTGGGACTCCAACAAGTAGCAAGTTACAGA...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | GTGCAAGGAAGAATAGAATTTGTGTGTGTGCCCGAGTaGTCAAGTGTGTGTGCATGTGTGTTTGTATTAAAG | + |
Preference number: 3 (lower is better) Translates to: VQGRIEFVCVPE*SSVCACVFVLK Trigger: CTTTAATACAAACACACATGCACACACACTTGAGCACTCGGGCACACACACAAATTCTATTCTTCCTTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR GCA 72 bp | GCGAGTCATATATGTTTTCATGCACCTCTCTGTGTCTaGATTGTGAAGATGGAAGCTGTTGCTATTGAGACT | + |
Preference number: 3 (lower is better) Translates to: ASHICFHAPLCV*IVKMEAVAIET Trigger: AGTCTCAATAGCAACAGCTTCCATCTTCACAATGCAGACACAGAGAGGTGCATGAAAACATATATGACTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | TTCTCTTTCACCATTGAAATCCCAACTCTGCATTGTTaGAGAGACTTGAAAGCCAGTTTCTTAGGCAGCAGA | + |
Preference number: 3 (lower is better) Translates to: FSFTIEIPTLHC*RDLKASFLGSR Trigger: TCTGCTGCCTAAGAAACTGGCTTTCAAGTCTCTCCAACAATGCAGAGTTGGGATTTCAATGGTGAAAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | GATACTTGCCCCATACAAAGTCCAACCCTTGATAAATaGGGCATGGATTTCTCTTTCACCATTGAAATCCCA | + |
Preference number: 3 (lower is better) Translates to: DTCPIQSPTLDK*GMDFSFTIEIP Trigger: TGGGATTTCAATGGTGAAAGAGAAATCCATGCCCCATTTATCAAGGGTTGGACTTTGTATGGGGCAAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGTCCATGACACAGGACTaGGAAACTGTTCTGGGGTGG | + |
Preference number: 3 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGSMTQD*ETVLGW Trigger: CCACCCCAGAACAGTTTCCAAGTCCTGTGTCATGGA...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAACAGGGGGCCTCCACTTaGAAGTGCCTTTTGCTTAAG | + |
Preference number: 3 (lower is better) Translates to: GKGLELLNIYTVTIAGRKQGAST*KCLLLK Trigger: CTTAAGCAAAAGGCACTTCAAAGTGGAGGCCCCCTG...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGACATTGTTGGAGAGACTaGAAAGCCAGTTTCTTAGGC | + |
Preference number: 3 (lower is better) Translates to: GGKGLELLNIYTVTIAGRHCWRD*KASFLG Trigger: GCCTAAGAAACTGGCTTTCAAGTCTCTCCAACAATG...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | ACTAGGAACTTTTTGCTGATATCCCATGGTGACTTATaGTCAGTGGTCCTTTGTACTTTAGCAACCAGCAAC | + |
Preference number: 3 (lower is better) Translates to: TRNFLLISHGDL*SVVLCTLATSN Trigger: GTTGCTGGTTGCTAAAGTACAAAGGACCACTGATCATAAGTCACCATGGGATATCAGCAAAAAGTTCCTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | GATGCCCCTCTTCAAATAGGTACTATAAATATACTAGAGCTATCCCTGAAAAGAAGCCTCTGTCCTCTATaGTGTCATCACAATGAACGT | + |
Preference number: 3 (lower is better) Translates to: DAPLQIGTINILELSLKRSLCPL*CHHNER Trigger: ACGTTCATTGTGATGACACAATAGAGGACAGAGGCT...TCTTTTCAGGGATAGCTCTAGTATATTTATAGTACCTATTTGAAGAGGGGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAACTGTGTGGGAGCCCTaGGCATTAAAACATGTCAGA | + |
Preference number: 3 (lower is better) Translates to: GKGLELLNIYTVTIAGRKTVWEP*ALKHVR Trigger: TCTGACATGTTTTAATGCCAAGGGCTCCCACACAGT...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGAGTGTTCAAAAGCAGTaGACTTCTGCCACAAAGGAA | + |
Preference number: 3 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKSVQKQ*TSATKE Trigger: TTCCTTTGTGGCAGAAGTCAACTGCTTTTGAACACT...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | GCATGTGTGTTTGTATTAAAGCACACCGAAATTCTCTaGAATGCTTCATTCAGACAGGCATCAAACCCTATC | + |
Preference number: 3 (lower is better) Translates to: ACVFVLKHTEIL*NASFRQASNPI Trigger: GATAGGGTTTGATGCCTGTCTGAATGAAGCATTTCAGAGAATTTCGGTGTGCTTTAATACAAACACACATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | GTTTTAGTCTTGAGAGCTTCTGTCCATATCTATACATaGACAGCTCACCATCCTCAGTCAGAAACTGTTTTG | + |
Preference number: 3 (lower is better) Translates to: VLVLRASVHIYT*TAHHPQSETVL Trigger: CAAAACAGTTTCTGACTGAGGATGGTGAGCTGTTCATGTATAGATATGGACAGAAGCTCTCAAGACTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | GTTTGTAGATGGAATGCTGAACTTCAGCTGCAGTATTaGGTTACCAGACCTTTTAAATTCAGCTTTGAGTTC | + |
Preference number: 3 (lower is better) Translates to: VCRWNAELQLQY*VTRPFKFSFEF Trigger: GAACTCAAAGCTGAATTTAAAAGGTCTGGTAACCCAATACTGCAGCTGAAGTTCAGCATTCCATCTACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | TCATGCATTTGTTTATCCTTTTGTTTGTCCTTTGTGTaGCCCTTTCTCCCACCCTTTCTTAAGAAAAGACTC | + |
Preference number: 3 (lower is better) Translates to: SCICLSFCLSFV*PFLPPFLKKRL Trigger: GAGTCTTTTCTTAAGAAAGGGTGGGAGAAAGGGCCACACAAAGGACAAACAAAAGGATAAACAAATGCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATATCAAAAATGTTCACTTaGGTCAGTGTGCATGAGTTT | + |
Preference number: 3 (lower is better) Translates to: WLLSRFPFDYMEQRRCKISKMFT*VSVHEF Trigger: AAACTCATGCACACTGACCAAAGTGAACATTTTTGA...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGATCAAAAATGTTCACTTaGGTCAGTGTGCATGAGTTT | + |
Preference number: 3 (lower is better) Translates to: IECFFWNRPAVCNLLLVGSKMFT*VSVHEF Trigger: AAACTCATGCACACTGACCAAAGTGAACATTTTTGA...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR-3UTR CAA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGCTTCTCCCATGCCTCTaGTTGCATATTTTTACTTCT | + |
Preference number: 3 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKLLPCL*LHIFTS Trigger: AGAAGTAAAAATATGCAACAAGAGGCATGGGAGAAG...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | CAATGTAATTTGCTGCCAGCCAGTCCCATTTTCTACTaGAATAAACCTTGTAGAAGTCATACAAGATGTCAG | + |
Preference number: 3 (lower is better) Translates to: QCNLLPASPIFY*NKPCRSHTRCQ Trigger: CTGACATCTTGTATGACTTCTACAAGGTTTATTTCAGTAGAAAATGGGACTGGCTGGCAGCAAATTACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | CTTTTGTTCAAAAATGTTCACTTTGGTCAGTGTGCATaGGTTTCCTCTTCCTTGACTGTCAAATCTGATGCT | + |
Preference number: 3 (lower is better) Translates to: LLFKNVHFGQCA*VSSSLTVKSDA Trigger: AGCATCAGATTTGACAGTCAAGGAAGAGGAAACTCATGCACACTGACCAAAGTGAACATTTTTGAACAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR TCA 72 bp | GAGCAATTTGATGTGGCTCCTTTCCCGTTTCCCTTTTaGCTATATGGAACAAAGAAGATGCAAGATACAAAA | + |
Preference number: 3 (lower is better) Translates to: EQFDVAPFPFPF*LYGTKKMQDTK Trigger: TTTTGTATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCACATCAAATTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | GATGCTTCTGATGAAAATAGGTACAGGGTCCTACAGTaGCAACTTTTAACCATGTCATGGATAAAGATCAAA | + |
Preference number: 3 (lower is better) Translates to: DASDENRYRVLQ*QLLTMSWIKIK Trigger: TTTGATCTTTATCCATGACATGGTTAAAAGTTGCCACTGTAGGACCCTGTACCTATTTTCATCAGAAGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CCA 72 bp | TCCTTTGTCCTTCAGTTTTATCCTGATGGTAAGAGTTaGAGAGTCATTGAGTTAACTGGCAAGGAATTTTCT | + |
Preference number: 3 (lower is better) Translates to: SFVLQFYPDGKS*RVIELTGKEFS Trigger: AGAAAATTCCTTGCCAGTTAACTCAATGACTCTCCAACTCTTACCATCAGGATAAAACTGAAGGACAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
3UTR CCA 72 bp | TGTACATATTTATGGTGTGCATATCATGACCAAATCTaGGTCATAGGTTCTGGTTGGCAGGAATTGATTATG | + |
Preference number: 3 (lower is better) Translates to: CTYLWCAYHDQI*VIGSGWQELIM Trigger: CATAATCAATTCCTGCCAACCAGAACCTATGACCCAGATTTGGTCATGATATGCACACCATAAATATGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAACTTTTAAATTCAGCTTaGAGTTCTGCATCCTGCCTG | + |
Preference number: 3 (lower is better) Translates to: GKGLELLNIYTVTIAGRKLLNSA*SSASCL Trigger: CAGGCAGGATGCAGAACTCAAAGCTGAATTTAAAAG...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGTTTCCTGAGTCCTTCTaGACATGTGCTTTTCAAATA | + |
Preference number: 3 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKFPESF*TCAFQI Trigger: TATTTGAAAAGCACATGTCAAGAAGGACTCAGGAAA...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 72 bp | TGTGTTTGTATTAAAGCACACCGAAATTCTCTGAAATaGTTCATTCAGACAGGCATCAAACCCTATCAAATG | + |
Preference number: 3 (lower is better) Translates to: CVCIKAHRNSLK*FIQTGIKPYQM Trigger: CATTTGATAGGGTTTGATGCCTGTCTGAATGAAGCATTTCAGAGAATTTCGGTGTGCTTTAATACAAACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAGAAAAAGCATTTTCCTaGACTATGAGATGGTCCTTG | + |
Preference number: 3 (lower is better) Translates to: GKGLELLNIYTVTIAGRKEKAFS*TMRWSL Trigger: CAAGGACCATCTCATAGTCAAGGAAAATGCTTTTTC...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR TCA 72 bp | AATCTTCTCAGCTATCACTCTGATTGCATTACAAAGTaGAATATTAAGGGTTTTAGTCTTGAGAGCTTCTGT | + |
Preference number: 3 (lower is better) Translates to: NLLSYHSDCITK*NIKGFSLESFC Trigger: ACAGAAGCTCTCAAGACTAAAACCCTTAATATTTCACTTTGTAATGCAATCAGAGTGATAGCTGAGAAGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR GCA 72 bp | AATGCTTCATTCAGACAGGCATCAAACCCTATCAAATaGTTCAGTGCAATTCTCTCAATAGAATACTTTAAA | + |
Preference number: 3 (lower is better) Translates to: NASFRQASNPIK*FSAILSIEYFK Trigger: TTTAAAGTATTCTATTGAGAGAATTGCACTGAAGCATTTGATAGGGTTTGATGCCTGTCTGAATGAAGCATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGGGAAGGTGGCTTGCTTaGGGGTGTTGGTCGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: AQAASSQDCKEPGAQSREGRWLA*GCWSAR Trigger: CCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCC...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGACCTCGGCAGTCTCTGTaGCCTTCGGGGCATCTGCAG | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGPRQSL*PSGHLQ Trigger: CTGCAGATGCCCCGAAGGCCACAGAGACTGCCGAGG...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGGTCCCCAGCTGTAGGTaGCTTTGCTTGGGCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: PPRAVHKLPLLKTARSLEVPSCR*LCLGFW Trigger: CCAGAAGCCCAAGCAAAGTCACCTACAGCTGGGGAC...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS-3UTR CCA 90 bp | ATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCGAGGAGCCAGGGCAGTaGGAGCCCCACAGTGATGTC | + |
Preference number: 4 (lower is better) Translates to: IHPSSNLPRRDTCLPGLCEEPGQ*EPHSDV Trigger: GACATCACTGTGGGGCTCCCACTGCCCTGGCTCCTC...GCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGATGCAGGACCCATGCCTaGCTGTCTCAGGGTAGACCT | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGCRTHA*LSQGRP Trigger: AGGTCTACCCTGAGACAGCCAGGCATGGGTCCTGCA...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACGAAAAGTTCTGGGGCTaGCCCGCCTGCAGCCATGAA | + |
Preference number: 4 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHEKFWG*PACSHE Trigger: TTCATGGCTGCAGGCGGGTCAGCCCCAGAACTTTTC...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGAAAAGTTCTGGGGCTaGCCCGCCTGCAGCCATGAA | + |
Preference number: 4 (lower is better) Translates to: RAVHKLPLLKTARSLEPREKFWG*PACSHE Trigger: TTCATGGCTGCAGGCGGGTCAGCCCCAGAACTTTTC...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGGAAGGTGGCTTGCTTaGGGGTGTTGGTCGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLGRWLA*GCWSAR Trigger: CCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCGGAAGGTGGCTTGCTTaGGGGTGTTGGTCGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: SPWESILPPTFQGGILASGRWLA*GCWSAR Trigger: CCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCC...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGACTCTCCAACCTGGTGTaGCCACCACACCATCAGGTA | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGLSNLV*PPHHQV Trigger: TACCTGATGGTGTGGTGGGCACACCAGGTTGGAGAG...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGCAGGAGCCTGGCTGTaGGGCTTTGGTGGAGATCCA | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTAGAWL*GFGGDP Trigger: TGGATCTCCACCAAAGCCCCACAGCCAGGCTCCTGC...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGGACCCTGTGCTACTCTaGGGCCACTCATATCACTGG | + |
Preference number: 4 (lower is better) Translates to: PPRAVHKLPLLKTARSLEDPVLL*GHSYHW Trigger: CCAGTGATATGAGTGGCCCCAGAGTAGCACAGGGTC...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGTCCCCAGCTGTAGGTaGCTTTGCTTGGGCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTVPSCR*LCLGFW Trigger: CCAGAAGCCCAAGCAAAGTCACCTACAGCTGGGGAC...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS-3UTR TCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGCTTCCAGGAGGACGCTaGCCACCAGGAACACGAAGT | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWLPGGR*PPGTRS Trigger: ACTTCGTGTTCCTGGTGGTCAGCGTCCTCCTGGAAG...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGCTTCCAGGAGGACGCTaGCCACCAGGAACACGAAGT | + |
Preference number: 4 (lower is better) Translates to: GIHPSSNLPRRDTCLPGLLPGGR*PPGTRS Trigger: ACTTCGTGTTCCTGGTGGTCAGCGTCCTCCTGGAAG...CAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGCAGGAGCCTGGCTGTaGGGCTTTGGTGGAGATCCA | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLAGAWL*GFGGDP Trigger: TGGATCTCCACCAAAGCCCCACAGCCAGGCTCCTGC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGACCCTGTGCTACTCTaGGGCCACTCATATCACTGG | + |
Preference number: 4 (lower is better) Translates to: RAVHKLPLLKTARSLEPRDPVLL*GHSYHW Trigger: CCAGTGATATGAGTGGCCCCAGAGTAGCACAGGGTC...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCTCCGACCAGCGAGGAGTACCTGTCAGTGGTGATGGAGGTCCTCTTTGCCTCTCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCG | + |
Preference number: 4 (lower is better) Translates to: PPTSEEYLSVVMEVLFASLMRLL*REAELP Trigger: CGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAG...AGAGGCAAAGAGGACCTCCATCACCACTGACAGGTACTCCTCGCTGGTCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGAAACGATTAGGAAGGTaGCTTGCTTGCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: AQAASSQDCKEPGAQSREKRLGR*LACGCW Trigger: CCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTT...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGGCTGCTGACAGTCACTaGGCTGAATCTGTGGATGAT | + |
Preference number: 4 (lower is better) Translates to: AQAASSQDCKEPGAQSREAADSH*AESVDD Trigger: ATCATCCACAGATTCAGCCCAGTGACTGTCAGCAGC...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCTGCAGCCAAATGGTaGCTCATGGGAACACCATTT | + |
Preference number: 4 (lower is better) Translates to: PPRAVHKLPLLKTARSLEPAAKW*LMGTPF Trigger: AAATGGTGTTCCCATGAGTCACCATTTGGCTGCAGG...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGCAAGGGTGTGTATCATaGGCTGGAAGATGCTATTCC | + |
Preference number: 4 (lower is better) Translates to: AQAASSQDCKEPGAQSREQGCVS*AGRCYS Trigger: GGAATAGCATCTTCCAGCTCATGATACACACCCTTG...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGCCACACCATCAGGTATaGGAAAACTGCAATCCAGGT | + |
Preference number: 4 (lower is better) Translates to: AQAASSQDCKEPGAQSREPHHQV*ENCNPG Trigger: ACCTGGATTGCAGTTTTCTCATACCTGATGGTGTGG...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGCTTCCAGGAGGACGCTaGCCACCAGGAACACGAAGT | + |
Preference number: 4 (lower is better) Translates to: PWESILPPTFQGGILASQLPGGR*PPGTRS Trigger: ACTTCGTGTTCCTGGTGGTCAGCGTCCTCCTGGAAG...CTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR GCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGATGGCTTCTCCTCTGTTaGTCTGAGAGTCTGTCTCAG | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGWLLLC*SESLSQ Trigger: CTGAGACAGACTCTCAGAGCAACAGAGGAGAAGCCA...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACACGGAACCCACGATGGTaGCAATGCCGACATTGCTGT | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTRNPRW*QCRHCC Trigger: ACAGCAATGTCGGCATTGGCACCATCGTGGGTTCCG...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGACCCTGTGCTACTCTaGGGCCACTCATATCACTGG | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTDPVLL*GHSYHW Trigger: CCAGTGATATGAGTGGCCCCAGAGTAGCACAGGGTC...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCG | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWLMRLL*REAELP Trigger: CGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAG...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACGAGGAGCCAGGGCAGTaGGAGCCCCACAGTGATGTC | + |
Preference number: 4 (lower is better) Translates to: SECPHGNPSFLQPSKEGYEEPGQ*EPHSDV Trigger: GACATCACTGTGGGGCTCCCACTGCCCTGGCTCCTC...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | TTGAGGACCTTGGGCCTCCACACAGCCTGTGATAGAGGAATGTCACTGACTCTGGAAAAGTTCTGGGGCTaGCCCGCCTGCAGCCATGAA | + |
Preference number: 4 (lower is better) Translates to: LRTLGLHTACDRGMSLTLEKFWG*PACSHE Trigger: TTCATGGCTGCAGGCGGGTCAGCCCCAGAACTTTTC...CAGAGTCAGTGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAAGATGCTATTCCTCATaGGACTGTTGTGGAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: RAVHKLPLLKTARSLEPRRCYSS*DCCGGR Trigger: CCTCCCTCCACAACAGTCTCATGAGGAATAGCATCT...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGGACGTCAGGTAAGGTaGTCCAGAGAGGGAACACAA | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTGRQVR*SREGTQ Trigger: TTGTGTTCCCTCTCTGGATCACCTTACCTGACGTCC...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAACGGAACCCACGATGGTaGCAATGCCGACATTGCTGT | + |
Preference number: 4 (lower is better) Translates to: ILPPTFQGGILASQGCAQRNPRW*QCRHCC Trigger: ACAGCAATGTCGGCATTGGCACCATCGTGGGTTCCG...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCTCTCCAACCTGGTGTaGCCACCACACCATCAGGTA | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLLSNLV*PPHHQV Trigger: TACCTGATGGTGTGGTGGGCACACCAGGTTGGAGAG...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAACTCTCCAACCTGGTGTaGCCACCACACCATCAGGTA | + |
Preference number: 4 (lower is better) Translates to: ILPPTFQGGILASQGCAQLSNLV*PPHHQV Trigger: TACCTGATGGTGTGGTGGGCACACCAGGTTGGAGAG...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACGCAGGAGCCTGGCTGTaGGGCTTTGGTGGAGATCCA | + |
Preference number: 4 (lower is better) Translates to: SECPHGNPSFLQPSKEGYAGAWL*GFGGDP Trigger: TGGATCTCCACCAAAGCCCCACAGCCAGGCTCCTGC...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGGCAGGAGCCTGGCTGTaGGGCTTTGGTGGAGATCCA | + |
Preference number: 4 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLAGAWL*GFGGDP Trigger: TGGATCTCCACCAAAGCCCCACAGCCAGGCTCCTGC...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGGACCCTGTGCTACTCTaGGGCCACTCATATCACTGG | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVDPVLL*GHSYHW Trigger: CCAGTGATATGAGTGGCCCCAGAGTAGCACAGGGTC...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCTTTGCTTGGGCTTCTaGCACTGTCACCTTGATAAC | + |
Preference number: 4 (lower is better) Translates to: PPRAVHKLPLLKTARSLELCLGF*HCHLDN Trigger: GTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAG...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCG | + |
Preference number: 4 (lower is better) Translates to: PWESILPPTFQGGILASQLMRLL*REAELP Trigger: CGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAG...CTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GTTTCAGGGTTGCCTAAGGCTATAGGAGAGATGACAGCAAGCAAGACTGGCTTGCCTCGGCAGTCTCTGTaGCCTTCGGGGCATCTGCAG | + |
Preference number: 4 (lower is better) Translates to: VSGLPKAIGEMTASKTGLPRQSL*PSGHLQ Trigger: CTGCAGATGCCCCGAAGGCCACAGAGACTGCCGAGG...CAAGCCAGTCTTGCTTGCTGTCATCTCTCCTATAGCCTTAGGCAACCCTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTaGCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGY*PPRAVHKLPLL Trigger: GAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACACCTGCAGCCAAATGGTaGCTCATGGGAACACCATTT | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTPAAKW*LMGTPF Trigger: AAATGGTGTTCCCATGAGTCACCATTTGGCTGCAGG...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCGAAAAGTTCTGGGGCTaGCCCGCCTGCAGCCATGAA | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCEKFWG*PACSHE Trigger: TTCATGGCTGCAGGCGGGTCAGCCCCAGAACTTTTC...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGGTCCCCAGCTGTAGGTaGCTTTGCTTGGGCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLVPSCR*LCLGFW Trigger: CCAGAAGCCCAAGCAAAGTCACCTACAGCTGGGGAC...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS-3UTR TCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGAGATGCTATTCCTCATaGGACTGTTGTGGAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWRCYSS*DCCGGR Trigger: CCTCCCTCCACAACAGTCTCATGAGGAATAGCATCT...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGGACGTCAGGTAAGGTaGTCCAGAGAGGGAACACAA | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLGRQVR*SREGTQ Trigger: TTGTGTTCCCTCTCTGGATCACCTTACCTGACGTCC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCGTAGGTGACTTTGCTTaGGCTTCTGGCACTGTCACC | + |
Preference number: 4 (lower is better) Translates to: SPWESILPPTFQGGILASVGDFA*ASGTVT Trigger: GGTGACAGTGCCAGAAGCCCAAGCAAAGTCACCTAC...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS-3UTR CCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAAAGTTCTTCAGCGAGTaGGTCAAGGGTGTGTATCAT | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGKFFSE*VKGVYH Trigger: ATGATACACACCCTTGACCCACTCGCTGAAGAACTT...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044990.11 ENSMUST00000107157.9 |
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CDS-3UTR CCA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGTCATTCTCATCCACTTaGCATTTCTTCTTGGCGATC | + |
Preference number: 4 (lower is better) Translates to: AQAASSQDCKEPGAQSRESFSST*HFFLAI Trigger: GATCGCCAAGAAGAAATGCCAAGTGGATGAGAATGA...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGG | + |
Preference number: 4 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHAASML*ERFPFW Trigger: CCAGAATGGAAACCTCTCCCACAACATTGAAGCTGC...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAAACGATTAGGAAGGTaGCTTGCTTGCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTKRLGR*LACGCW Trigger: CCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTT...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGAAACGATTAGGAAGGTaGCTTGCTTGCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: GIHPSSNLPRRDTCLPGLKRLGR*LACGCW Trigger: CCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTT...CAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATAGAGGAGCCAGGGCAGTaGGAGCCCCACAGTGATGTC | + |
Preference number: 4 (lower is better) Translates to: NWRCRGVGQLSLVRSRYIEEPGQ*EPHSDV Trigger: GACATCACTGTGGGGCTCCCACTGCCCTGGCTCCTC...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGGCTGCTGACAGTCACTaGGCTGAATCTGTGGATGAT | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWAADSH*AESVDD Trigger: ATCATCCACAGATTCAGCCCAGTGACTGTCAGCAGC...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | ACATCTGTGATTGCACAGAGGTCTATGTCCTCCTTGTaGCGGCAACCACAGCCTCTGTGGACCCAAAGTGCC | + |
Preference number: 4 (lower is better) Translates to: TSVIAQRSMSSL*RQPQPLWTQSA Trigger: GGCACTTTGGGTCCACAGAGGCTGTGGTTGCCGCAACAAGGAGGACATAGACCTCTGTGCAATCACAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGTCTCCTCTGTTGCTCTaGGAGTCTGTCTCAGTAAAG | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWSPLLL*ESVSVK Trigger: CTTTACTGAGACAGACTCTCAGAGCAACAGAGGAGA...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCAGATGCTATTCCTCATaGGACTGTTGTGGAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SPWESILPPTFQGGILASRCYSS*DCCGGR Trigger: CCTCCCTCCACAACAGTCTCATGAGGAATAGCATCT...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGTGGCTTCTCCTCTGTTaGTCTGAGAGTCTGTCTCAG | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVWLLLC*SESLSQ Trigger: CTGAGACAGACTCTCAGAGCAACAGAGGAGAAGCCA...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCGGAACCCACGATGGTaGCAATGCCGACATTGCTGT | + |
Preference number: 4 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLRNPRW*QCRHCC Trigger: ACAGCAATGTCGGCATTGGCACCATCGTGGGTTCCG...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGGGAAAAGATGTCCTTTaGGTAGTCTCCCTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVGKDVL*VVSLGV Trigger: CACACCCAGGGAGACTACCCAAAGGACATCTTTTCC...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGGAAAAGATGTCCTTTaGGTAGTCTCCCTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLGKDVL*VVSLGV Trigger: CACACCCAGGGAGACTACCCAAAGGACATCTTTTCC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCGGAAAAGATGTCCTTTaGGTAGTCTCCCTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: SPWESILPPTFQGGILASGKDVL*VVSLGV Trigger: CACACCCAGGGAGACTACCCAAAGGACATCTTTTCC...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGCTTTGCTTGGGCTTCTaGCACTGTCACCTTGATAAC | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWLCLGF*HCHLDN Trigger: GTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAG...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCG | + |
Preference number: 4 (lower is better) Translates to: SECPHGNPSFLQPSKEGYLMRLL*REAELP Trigger: CGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAG...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGTGTGTATCATGAGCTaGAAGATGCTATTCCTCATG | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGVCIMS*KMLFLM Trigger: CATGAGGAATAGCATCTTCCAGCTCATGATACACAC...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGG | + |
Preference number: 4 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTAASML*ERFPFW Trigger: CCAGAATGGAAACCTCTCCCACAACATTGAAGCTGC...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGAGAGAGGGAACACAATaGGAAAAACGATTAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: PPRAVHKLPLLKTARSLEREGTQ*EKRLGR Trigger: CCTTCCTAATCGTTTTTCCCATTGTGTTCCCTCTCT...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGGCTGCTGACAGTCACTaGGCTGAATCTGTGGATGAT | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVAADSH*AESVDD Trigger: ATCATCCACAGATTCAGCCCAGTGACTGTCAGCAGC...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AGCACATCTGTGATTGCACAGAGGTCTATGTCCTCCTaGTTGCGGCAACCACAGCCTCTGTGGACCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: STSVIAQRSMSS*LRQPQPLWTQS Trigger: ACTTTGGGTCCACAGAGGCTGTGGTTGCCGCAACAAGGAGGACATAGACCTCTGTGCAATCACAGATGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCTCTCCTCTGTTGCTCTaGGAGTCTGTCTCAGTAAAG | + |
Preference number: 4 (lower is better) Translates to: SPWESILPPTFQGGILASSPLLL*ESVSVK Trigger: CTTTACTGAGACAGACTCTCAGAGCAACAGAGGAGA...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCAAGGGTGTGTATCATaGGCTGGAAGATGCTATTCC | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLQGCVS*AGRCYS Trigger: GGAATAGCATCTTCCAGCTCATGATACACACCCTTG...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCCACACCATCAGGTATaGGAAAACTGCAATCCAGGT | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVPHHQV*ENCNPG Trigger: ACCTGGATTGCAGTTTTCTCATACCTGATGGTGTGG...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAACCACACCATCAGGTATaGGAAAACTGCAATCCAGGT | + |
Preference number: 4 (lower is better) Translates to: ILPPTFQGGILASQGCAQPHHQV*ENCNPG Trigger: ACCTGGATTGCAGTTTTCTCATACCTGATGGTGTGG...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAATCATTTCCACCTCTGTaGTTGTGCTGTTGGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: ILPPTFQGGILASQGCAQSFPPL*LCCWGV Trigger: AACTCCCCAACAGCACAAGCACAGAGGTGGAAATGA...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCTCATTTCCACCTCTGTaGTTGTGCTGTTGGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLSFPPL*LCCWGV Trigger: AACTCCCCAACAGCACAAGCACAGAGGTGGAAATGA...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGGGAAGGTGGCTTGCTTaGGGGTGTTGGTCGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQGRWLA*GCWSAR Trigger: CCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCC...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGCCAAATGGTGACTCATaGGAACACCATTTCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: PWESILPPTFQGGILASQPNGDS*EHHFCR Trigger: CCTGCAGAAATGGTGTTCCCATGAGTCACCATTTGG...CTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCTTTGCTTGGGCTTCTaGCACTGTCACCTTGATAAC | + |
Preference number: 4 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVLCLGF*HCHLDN Trigger: GTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAG...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACGTAGGTGACTTTGCTTaGGCTTCTGGCACTGTCACC | + |
Preference number: 4 (lower is better) Translates to: SECPHGNPSFLQPSKEGYVGDFA*ASGTVT Trigger: GGTGACAGTGCCAGAAGCCCAAGCAAAGTCACCTAC...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS-3UTR CCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGAAGTTCTTCAGCGAGTaGGTCAAGGGTGTGTATCAT | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWKFFSE*VKGVYH Trigger: ATGATACACACCCTTGACCCACTCGCTGAAGAACTT...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044990.11 ENSMUST00000107157.9 |
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CDS-3UTR CCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACTCATTCTCATCCACTTaGCATTTCTTCTTGGCGATC | + |
Preference number: 4 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHSFSST*HFFLAI Trigger: GATCGCCAAGAAGAAATGCCAAGTGGATGAGAATGA...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGGAGAGGTTTCCATTCTaGACGGGTTCCGAAGCTTCG | + |
Preference number: 4 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLERFPF*TGSEAS Trigger: CGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTC...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCGAGAGGTTTCCATTCTaGACGGGTTCCGAAGCTTCG | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCERFPF*TGSEAS Trigger: CGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTC...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGG | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLAASML*ERFPFW Trigger: CCAGAATGGAAACCTCTCCCACAACATTGAAGCTGC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGAGAGGGAACACAATaGGAAAAACGATTAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHREGTQ*EKRLGR Trigger: CCTTCCTAATCGTTTTTCCCATTGTGTTCCCTCTCT...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCCTCCCTTCAGCGAGTaGGTCAAGGGTGTGTATCAT | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCPPFSE*VKGVYH Trigger: ATGATACACACCCTTGACCCACTCGCTGAAGGGAGG...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107155.8 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACGATCTTGTGGAGAATTaGAGCTTTTTCTCTGAACCT | + |
Preference number: 4 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHDLVEN*SFFSEP Trigger: AGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATC...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGATTCTTGGCGATCTTGTaGAGAATTGAAGCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: ASQGCAQAASSQDCKEPGFLAIL*RIEAFS Trigger: AGAAAAAGCTTCAATTCTCCACAAGATCGCCAAGAA...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGCTTGGCATTTCTTCTTaGCGATCTTGTGGAGAATTG | + |
Preference number: 4 (lower is better) Translates to: GIHPSSNLPRRDTCLPGLLGISS*RSCGEL Trigger: CAATTCTCCACAAGATCGCCAAGAAGAAATGCCAAG...CAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGCCTGGAGCCCAGAGCCGGGAGGGACCATCCATGCTGTTGGTTTAAGATATGGCTTGGCATTTCTTCTTaGCGATCTTGTGGAGAATTG | + |
Preference number: 4 (lower is better) Translates to: SLEPRAGRDHPCCWFKIWLGISS*RSCGEL Trigger: CAATTCTCCACAAGATCGCCAAGAAGAAATGCCAAG...CCATATCTTAAACCAACAGCATGGATGGTCCCTCCCGGCTCTGGGCTCCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | CCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTaGGAGCAATTTGATGTGGCTCCTTTCCCGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: PRINVGKHTHRV*EQFDVAPFPFP Trigger: GGGAAACGGGAAAGGAGCCACATCAAATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AGAAGCTCTGATGGACGGTCTGACTTTTTGAGGACCTaGGGCCTCCACACAGCCTGTGATAGAGGAATGTCA | + |
Preference number: 4 (lower is better) Translates to: RSSDGRSDFLRT*GLHTACDRGMS Trigger: TGACATTCCTCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAAAAAGTCAGACCGTCCATCAGAGCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCTCATTTCCACCTCTGTaGTTGTGCTGTTGGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCSFPPL*LCCWGV Trigger: AACTCCCCAACAGCACAAGCACAGAGGTGGAAATGA...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGTGTGTATCATGAGCTaGAAGATGCTATTCCTCATG | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLVCIMS*KMLFLM Trigger: CATGAGGAATAGCATCTTCCAGCTCATGATACACAC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACTTCTTGGCGATCTTGTaGAGAATTGAAGCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHFLAIL*RIEAFS Trigger: AGAAAAAGCTTCAATTCTCCACAAGATCGCCAAGAA...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGATTCTTGGCGATCTTGTaGAGAATTGAAGCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: RAVHKLPLLKTARSLEPRFLAIL*RIEAFS Trigger: AGAAAAAGCTTCAATTCTCCACAAGATCGCCAAGAA...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GTTTCAGGGTTGCCTAAGGCTATAGGAGAGATGACAGCAAGCAAGACTGGCTTGAAACGATTAGGAAGGTaGCTTGCTTGCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: VSGLPKAIGEMTASKTGLKRLGR*LACGCW Trigger: CCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTT...CAAGCCAGTCTTGCTTGCTGTCATCTCTCCTATAGCCTTAGGCAACCCTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCAGAGAGGGAACACAATaGGAAAAACGATTAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: SPWESILPPTFQGGILASREGTQ*EKRLGR Trigger: CCTTCCTAATCGTTTTTCCCATTGTGTTCCCTCTCT...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AACCAAAACTGCCCAACCCTCAGCAGACACCTCTCCTaGTCACCCAGTCTGAATGTCATCTGTCTTATGGAG | + |
Preference number: 4 (lower is better) Translates to: NQNCPTLSRHLS*SPSLNVICLME Trigger: CTCCATAAGACAGATGACATTCAGACTGGGTGACAAGGAGAGGTGTCTGCTGAGGGTTGGGCAGTTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | GAATTCAACAGAAGCTCTGATGGACGGTCTGACTTTTaGAGGACCTTGGGCCTCCACACAGCCTGTGATAGA | + |
Preference number: 4 (lower is better) Translates to: EFNRSSDGRSDF*RTLGLHTACDR Trigger: TCTATCACAGGCTGTGTGGAGGCCCAAGGTCCTCAAAAAGTCAGACCGTCCATCAGAGCTTCTGTTGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCGATCTTGTGGAGAATTaGAGCTTTTTCTCTGAACCT | + |
Preference number: 4 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLDLVEN*SFFSEP Trigger: AGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATC...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | ATTTTCAGCACACATCTCAGCGCTCTTGGCAGGACTTaGGACTGTGTGGGAGCCCTTGGCATTAAAACATGT | + |
Preference number: 4 (lower is better) Translates to: IFSTHLSALGRT*DCVGALGIKTC Trigger: ACATGTTTTAATGCCAAGGGCTCCCACACAGTCCAAAGTCCTGCCAAGAGCGCTGAGATGTGTGCTGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | GGGACACCATGGAAGTGGGAGCTGGCTTTGGGAATGTaGTCTTCTCAAAGCAACTTTTGTTCAGGACCACAA | + |
Preference number: 4 (lower is better) Translates to: GTPWKWELALGM*SSQSNFCSGPQ Trigger: TTGTGGTCCTGAACAAAAGTTGCTTTGAGAAGACAACATTCCCAAAGCCAGCTCCCACTTCCATGGTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | CAGGGACACTGCTGCCCATTCCCTACATTCTGTGGGTaGAAGTGTTTGAATGGTATGCGAGTGTTTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: QGHCCPFPTFCG*KCLNGMRVFVC Trigger: ACACACAAACACTCGCATACCATTCAAACACTTCAACCCACAGAATGTAGGGAATGGGCAGCAGTGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGACTTCCAGGAGGACGCTaGCCACCAGGAACACGAAGT | + |
Preference number: 4 (lower is better) Translates to: GGKGLELLNIYTVTIAGRLPGGR*PPGTRS Trigger: ACTTCGTGTTCCTGGTGGTCAGCGTCCTCCTGGAAG...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | CCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGTATTATAATGTCTCCTaGAGCCAAATGGTGACTCAT | + |
Preference number: 4 (lower is better) Translates to: PWESILPPTFQGGILASQYYNVS*SQMVTH Trigger: ATGAGTCACCATTTGGCTGCAGGAGACATTATAATA...CTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCGTGTGTATCATGAGCTaGAAGATGCTATTCCTCATG | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCVCIMS*KMLFLM Trigger: CATGAGGAATAGCATCTTCCAGCTCATGATACACAC...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTTGGCATTTCTTCTTaGCGATCTTGTGGAGAATTG | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCLGISS*RSCGEL Trigger: CAATTCTCCACAAGATCGCCAAGAAGAAATGCCAAG...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGTCATTCTCATCCACTTaGCATTTCTTCTTGGCGATC | + |
Preference number: 4 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLSFSST*HFFLAI Trigger: GATCGCCAAGAAGAAATGCCAAGTGGATGAGAATGA...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | ACCACTCCAAACAGCCTATGTACAGTTTGCCATCCGAATTCCAGTTATGTACAGGAGAGGTTTCCATTCTaGACGGGTTCCGAAGCTTCG | + |
Preference number: 4 (lower is better) Translates to: TTPNSLCTVCHPNSSYVQERFPF*TGSEAS Trigger: CGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTC...CTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCGATCTTGTGGAGAATTaGAGCTTTTTCTCTGAACCT | + |
Preference number: 4 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCDLVEN*SFFSEP Trigger: AGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATC...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR TCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGAGGCTGGAGGGAATTCTaGGAGCTTTGCTTGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: IECFFWNRPAVCNLLLVGGWREF*ELCLGF Trigger: GAAGCCCAAGCAAAGCTCTCAGAATTCCCTCCAGCC...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGGGAAAAGATGTCCTTTaGGTAGTCTCCCTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: SSSLTVKSDALCFGIPSVGKDVL*VVSLGV Trigger: CACACCCAGGGAGACTACCCAAAGGACATCTTTTCC...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGTTGCCTAAGGCTATAGGAGAGATGACAGCAAGCAAGACTGGCTTGGTGTGTATCATGAGCTaGAAGATGCTATTCCTCATG | + |
Preference number: 4 (lower is better) Translates to: VSGLPKAIGEMTASKTGLVCIMS*KMLFLM Trigger: CATGAGGAATAGCATCTTCCAGCTCATGATACACAC...CAAGCCAGTCTTGCTTGCTGTCATCTCTCCTATAGCCTTAGGCAACCCTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | TTTTCCTCCCAGGATCAATGTAGGCAAGCACACACACAGAGTCTTGGAGCAATTGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGG | + |
Preference number: 4 (lower is better) Translates to: FSSQDQCRQAHTQSLGAIAASML*ERFPFW Trigger: CCAGAATGGAAACCTCTCCCACAACATTGAAGCTGC...AATTGCTCCAAGACTCTGTGTGTGTGCTTGCCTACATTGATCCTGGGAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGGAGGAGCCAGGGCAGTaGGAGCCCCACAGTGATGTC | + |
Preference number: 4 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGEEPGQ*EPHSDV Trigger: GACATCACTGTGGGGCTCCCACTGCCCTGGCTCCTC...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AAAGCCAGTTTCTTAGGCAGCAGACCTTTTTATTTCTaGTGTCCTCAGGGGGCCTCCACTTTGAAGTGCCTT | + |
Preference number: 4 (lower is better) Translates to: KASFLGSRPFYF*CPQGASTLKCL Trigger: AAGGCACTTCAAAGTGGAGGCCCCCTGAGGACACAAGAAATAAAAAGGTCTGCTGCCTAAGAAACTGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | CCTTGGTCTGAACTAAGTTTCTCTCCTGTTTCAGGGTaGCCTAAGGCTATAGGAGAGATGACAGCAAGCAAG | + |
Preference number: 4 (lower is better) Translates to: PWSELSFSPVSG*PKAIGEMTASK Trigger: CTTGCTTGCTGTCATCTCTCCTATAGCCTTAGGCAACCCTGAAACAGGAGAGAAACTTAGTTCAGACCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AACTCCCATTGGATCCGTATTCAAGTCTACTGGTCCTaGGAAGGTATTTGCACTACTGTGCACCTCTGTGGT | + |
Preference number: 4 (lower is better) Translates to: NSHWIRIQVYWS*EGICTTVHLCG Trigger: ACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTTGAATACGGATCCAATGGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | ACCCAAGCACACCACTCCAAACAGCCTATGTACAGTTaGCCATCCGAATTCCAGTTATGTACAGACAGAGTC | + |
Preference number: 4 (lower is better) Translates to: TQAHHSKQPMYS*PSEFQLCTDRV Trigger: GACTCTGTCTGTACATAACTGGAATTCGGATGGCAAACTGTACATAGGCTGTTTGGAGTGGTGTGCTTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR TCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATAGGACGTCAGGTAAGGTaGTCCAGAGAGGGAACACAA | + |
Preference number: 4 (lower is better) Translates to: WLLSRFPFDYMEQRRCKIGRQVR*SREGTQ Trigger: TTGTGTTCCCTCTCTGGATCACCTTACCTGACGTCC...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTATTATAATGTCTCCTaGAGCCAAATGGTGACTCAT | + |
Preference number: 4 (lower is better) Translates to: SECPHGNPSFLQPSKEGYYYNVS*SQMVTH Trigger: ATGAGTCACCATTTGGCTGCAGGAGACATTATAATA...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGTCATTTCCACCTCTGTaGTTGTGCTGTTGGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: SSSLTVKSDALCFGIPSVSFPPL*LCCWGV Trigger: AACTCCCCAACAGCACAAGCACAGAGGTGGAAATGA...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGTTCTTGGCGATCTTGTaGAGAATTGAAGCTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLFLAIL*RIEAFS Trigger: AGAAAAAGCTTCAATTCTCCACAAGATCGCCAAGAA...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGACCTCCCTTCAGCGAGTaGGTCAAGGGTGTGTATCAT | + |
Preference number: 4 (lower is better) Translates to: GGKGLELLNIYTVTIAGRPPFSE*VKGVYH Trigger: ATGATACACACCCTTGACCCACTCGCTGAAGGGAGG...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
||
CDS-3UTR CCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGATCTGAGAGCTTTGCTTaGGCTTCTGGCACTGTCACC | + |
Preference number: 4 (lower is better) Translates to: IECFFWNRPAVCNLLLVGSESFA*ASGTVT Trigger: GGTGACAGTGCCAGAAGCCCAAGCAAAGCTCTCAGA...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
||
3UTR CAA 72 bp | TGCAGTATTGGGTTACCAGACCTTTTAAATTCAGCTTaGAGTTCTGCATCCTGCCTGCGTCCCTGTGTTAAG | + |
Preference number: 4 (lower is better) Translates to: CSIGLPDLLNSA*SSASCLRPCVK Trigger: CTTAACACAGGGACGCAGGCAGGATGCAGAACTCAAAGCTGAATTTAAAAGGTCTGGTAACCCAATACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | GCAACCCAGATACTTGCCCCATACAAAGTCCAACCCTaGATAAATGGGGCATGGATTTCTCTTTCACCATTG | + |
Preference number: 4 (lower is better) Translates to: ATQILAPYKVQP*INGAWISLSPL Trigger: CAATGGTGAAAGAGAAATCCATGCCCCATTTATCAAGGGTTGGACTTTGTATGGGGCAAGTATCTGGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | TCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTaGGAGTCCCAATCTTTCTGGGTGCAAGGAAGAATA | + |
Preference number: 4 (lower is better) Translates to: SGTDLLSVTCYL*ESQSFWVQGRI Trigger: TATTCTTCCTTGCACCCAGAAAGATTGGGACTCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | TTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTaGTTGGAGTCCCAATCTTTCTGGGTGCAAGGAAGA | + |
Preference number: 4 (lower is better) Translates to: FSGTDLLSVTCY*LESQSFWVQGR Trigger: TCTTCCTTGCACCCAGAAAGATTGGGACTCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | GAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTaGCTACTTGTTGGAGTCCCAATCTTTCTGGGTGCA | + |
Preference number: 4 (lower is better) Translates to: ECFFWNRPAVCN*LLVGVPIFLGA Trigger: TGCACCCAGAAAGATTGGGACTCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AGCCTGGCTAGGTCATGCATTTGTTTATCCTTTTGTTaGTCCTTTGTGTGGCCCTTTCTCCCACCCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: SLARSCICLSFC*SFVWPFLPPFL Trigger: AAGAAAGGGTGGGAGAAAGGGCCACACAAAGGACAAACAAAAGGATAAACAAATGCATGACCTAGCCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | GATCCGTATTCAAGTCTACTGGTCCTTGGAAGGTATTaGCACTACTGTGCACCTCTGTGGTTACAGATTCTG | + |
Preference number: 4 (lower is better) Translates to: DPYSSLLVLGRY*HYCAPLWLQIL Trigger: CAGAATCTGTAACCACAGAGGTGCACAGTAGTGCAAATACCTTCCAAGGACCAGTAGACTTGAATACGGATC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | ACAAAGAAGATGCAAGATACAAAAAGAGCTGCAACCTaGACCTCACTGGCCCTCTATGATAATGCTGTGCCC | + |
Preference number: 4 (lower is better) Translates to: TKKMQDTKRAAT*TSLALYDNAVP Trigger: GGGCACAGCATTATCATAGAGGGCCAGTGAGGTCAAGGTTGCAGCTCTTTTTGTATCTTGCATCTTCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGACCTGCAGCCAAATGGTaGCTCATGGGAACACCATTT | + |
Preference number: 4 (lower is better) Translates to: GGKGLELLNIYTVTIAGRPAAKW*LMGTPF Trigger: AAATGGTGTTCCCATGAGTCACCATTTGGCTGCAGG...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | AATGTAATTTGCTGCCAGCCAGTCCCATTTTCTACTGAAATAAACCTTGTAGAACTCTCCAACCTGGTGTaGCCACCACACCATCAGGTA | + |
Preference number: 4 (lower is better) Translates to: NVICCQPVPFSTEINLVELSNLV*PPHHQV Trigger: TACCTGATGGTGTGGTGGGCACACCAGGTTGGAGAG...TTCTACAAGGTTTATTTCAGTAGAAAATGGGACTGGCTGGCAGCAAATTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | TGCTGCCCATTCCCTACATTCTGTGGGTTGAAGTGTTaGAATGGTATGCGAGTGTTTGTGTGTATATGTGCA | + |
Preference number: 4 (lower is better) Translates to: CCPFPTFCGLKC*NGMRVFVCICA Trigger: TGCACATATACACACAAACACTCGCATACCATTCAAACACTTCAACCCACAGAATGTAGGGAATGGGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | TGGCTCCTTTCCCGTTTCCCTTTTGACTATATGGAACAAAGAAGATGCAAGATACTTTGCTTGGGCTTCTaGCACTGTCACCTTGATAAC | + |
Preference number: 4 (lower is better) Translates to: WLLSRFPFDYMEQRRCKILCLGF*HCHLDN Trigger: GTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAG...TATCTTGCATCTTCTTTGTTCCATATAGTCAAAAGGGAAACGGGAAAGGAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | AAGAGACAGCGGTCTCATATTCTTCTCCCATGCCTCTaGTTGCATATTTTTACTTCTCTGAAAGCAACAGGG | + |
Preference number: 4 (lower is better) Translates to: KRQRSHILLPCL*LHIFTSLKATG Trigger: CCCTGTTGCTTTCAGAGAAGTAAAAATATGCAACAAGAGGCATGGGAGAAGAATATGAGACCGCTGTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GATGCCCCTCTTCAAATAGGTACTATAAATATACTAGAGCTATCCCTGAAAAGAAGATGCTATTCCTCATaGGACTGTTGTGGAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: DAPLQIGTINILELSLKRRCYSS*DCCGGR Trigger: CCTCCCTCCACAACAGTCTCATGAGGAATAGCATCT...TCTTTTCAGGGATAGCTCTAGTATATTTATAGTACCTATTTGAAGAGGGGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | ATTATGTTGAAACTGCAACCAAAGAGAAAATTCCCATCCCAAAACAGCAGGAAGCAAGGGTGTGTATCATaGGCTGGAAGATGCTATTCC | + |
Preference number: 4 (lower is better) Translates to: IMLKLQPKRKFPSQNSRKQGCVS*AGRCYS Trigger: GGAATAGCATCTTCCAGCTCATGATACACACCCTTG...CTTCCTGCTGTTTTGGGATGGGAATTTTCTCTTTGGTTGCAGTTTCAACATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR GCA 90 bp | ATATTGTCTGTCAGCAGACCCAGTAGACTTGCACACACTGCCATGCAAGAAAGATATTATAATGTCTCCTaGAGCCAAATGGTGACTCAT | + |
Preference number: 4 (lower is better) Translates to: ILSVSRPSRLAHTAMQERYYNVS*SQMVTH Trigger: ATGAGTCACCATTTGGCTGCAGGAGACATTATAATA...TCTTTCTTGCATGGCAGTGTGTGCAAGTCTACTGGGTCTGCTGACAGACAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAGTAGGTGACTTTGCTTaGGCTTCTGGCACTGTCACC | + |
Preference number: 4 (lower is better) Translates to: GKGLELLNIYTVTIAGRKVGDFA*ASGTVT Trigger: GGTGACAGTGCCAGAAGCCCAAGCAAAGTCACCTAC...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107157.9 |
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CDS-3UTR CCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGATCGAAACACAGACTCTaGCAGTCAGGGTCATTTGTT | + |
Preference number: 4 (lower is better) Translates to: IECFFWNRPAVCNLLLVGSKHRL*QSGSFV Trigger: AACAAATGACCCTGACTGCCAGAGTCTGTGTTTCGA...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
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3UTR CAA 72 bp | TTTGTATTTATATGTATGCATAGCCTCTGTCCTCTATaGTGTCATCACAATGAACGTACCTCCGACCAGCGA | + |
Preference number: 4 (lower is better) Translates to: FVFICMHSLCPL*CHHNERTSDQR Trigger: TCGCTGGTCGGAGGTACGTTCATTGTGATGACACAATAGAGGACAGAGGCTATGCATACATATAAATACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | ACCATTGAAATCCCAACTCTGCATTGTTGGAGAGACTaGAAAGCCAGTTTCTTAGGCAGCAGACCTTTTTAT | + |
Preference number: 4 (lower is better) Translates to: TIEIPTLHCWRD*KASFLGSRPFY Trigger: ATAAAAAGGTCTGCTGCCTAAGAAACTGGCTTTCAAGTCTCTCCAACAATGCAGAGTTGGGATTTCAATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | GATGCCCCTCTTCAAATAGGTACTATAAATATACTAGAGCTATCCCTGAAAAGACAAGGGTGTGTATCATaGGCTGGAAGATGCTATTCC | + |
Preference number: 4 (lower is better) Translates to: DAPLQIGTINILELSLKRQGCVS*AGRCYS Trigger: GGAATAGCATCTTCCAGCTCATGATACACACCCTTG...TCTTTTCAGGGATAGCTCTAGTATATTTATAGTACCTATTTGAAGAGGGGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | AATGTAATTTGCTGCCAGCCAGTCCCATTTTCTACTGAAATAAACCTTGTAGAACCACACCATCAGGTATaGGAAAACTGCAATCCAGGT | + |
Preference number: 4 (lower is better) Translates to: NVICCQPVPFSTEINLVEPHHQV*ENCNPG Trigger: ACCTGGATTGCAGTTTTCTCATACCTGATGGTGTGG...TTCTACAAGGTTTATTTCAGTAGAAAATGGGACTGGCTGGCAGCAAATTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGATCATTCTCATCCACTTaGCATTTCTTCTTGGCGATC | + |
Preference number: 4 (lower is better) Translates to: IECFFWNRPAVCNLLLVGSFSST*HFFLAI Trigger: GATCGCCAAGAAGAAATGCCAAGTGGATGAGAATGA...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGAAGAGAGGGAACACAATaGGAAAAACGATTAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: IECFFWNRPAVCNLLLVGREGTQ*EKRLGR Trigger: CCTTCCTAATCGTTTTTCCCATTGTGTTCCCTCTCT...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR TCA 90 bp | ATAGAATGCTTTTTCTGGAACAGACCTGCTGTCTGTAACTTGCTACTTGTTGGAGATCTTGTGGAGAATTaGAGCTTTTTCTCTGAACCT | + |
Preference number: 4 (lower is better) Translates to: IECFFWNRPAVCNLLLVGDLVEN*SFFSEP Trigger: AGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATC...TCCAACAAGTAGCAAGTTACAGACAGCAGGTCTGTTCCAGAAAAAGCATTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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3UTR CAA 72 bp | TCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATaGATGGGGTTGTTCTATTTAATACTGGGGCTTACA | + |
Preference number: 4 (lower is better) Translates to: SLGQVVCSSLRL*MGLFYLILGLT Trigger: TGTAAGCCCCAGTATTAAATAGAACAACCCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS-3UTR CAA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGAGGAAGGTGGCTTGCTaGCGGGTGTTGGTCGGCCAG | + |
Preference number: 5 (lower is better) Translates to: PPRAVHKLPLLKTARSLERKVAC*RVLVGQ Trigger: CTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCT...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
||
CDS CCA 90 bp | GTGGCTTGCTTGCGGGTGTTGGTCGGCCAGGACAAGCTGAGGGGCTaGTCATCTTCTTCCTCGGCAGTCGGGGCATCTGCAGCTTCAATG | + |
Preference number: 5 (lower is better) Translates to: VACLRVLVGQDKLRG*SSSSSAVGASAASM Trigger: CATTGAAGCTGCAGATGCCCCGACTGCCGAGGAAGAAGATGACCAGCCCCTCAGCTTGTCCTGGCCGACCAACACCCGCAAGCAAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 |
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CDS-3UTR CAA 90 bp | CCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAGGAAGGTGGCTTGCTaGCGGGTGTTGGTCGGCCAG | + |
Preference number: 5 (lower is better) Translates to: PSFLQPSKEGYLPPRAVHRKVAC*RVLVGQ Trigger: CTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCT...GTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | TTCCTCATGAGACTGTTGTGGAGGGAGGCAGAGCTTCCGCCTCGTTaGAGGCGTGGCTTCGACGGTAAAGTTGGCCCATCCTTGTCCCCA | + |
Preference number: 5 (lower is better) Translates to: FLMRLLWREAELPPR*RRGFDGKVGPSLSP Trigger: TGGGGACAAGGATGGGCCAACTTTACCGTCGAAGCCACGCCTCCAACGAGGCGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS-3UTR CAA 90 bp | GCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGAGCCGGGAGTTGTTCATCCGCCATTaGCAGAGGGCGATGGAGAGA | + |
Preference number: 5 (lower is better) Translates to: AQAASSQDCKEPGAQSRELFIRH*QRAMER Trigger: TCTCTCCATCGCCCTCTGCAAATGGCGGATGAACAA...CTCCCGGCTCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGGGGAAAAGATGTCCTTaGGGTAGTCTCCCTGGGTGT | + |
Preference number: 5 (lower is better) Translates to: PPRAVHKLPLLKTARSLEGKRCP*GSLPGC Trigger: ACACCCAGGGAGACTACCCAAAGGACATCTTTTCCC...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGGGAAAAGATGTCCTTaGGGTAGTCTCCCTGGGTGT | + |
Preference number: 5 (lower is better) Translates to: ASQGCAQAASSQDCKEPGGKRCP*GSLPGC Trigger: ACACCCAGGGAGACTACCCAAAGGACATCTTTTCCC...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGTTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTT | + |
Preference number: 5 (lower is better) Translates to: PPRAVHKLPLLKTARSLEFLMRL*WREAEL Trigger: AAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA...CTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | TCGGCAGTCTCTGTGGCCTTCGGGGCATCTGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGGACGGGTTCCGAAGCTTCGCTCGAT | + |
Preference number: 5 (lower is better) Translates to: SAVSVAFGASAASML*ERFPFWTGSEASLD Trigger: ATCGAGCGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGATGCCCCGAAGGCCACAGAGACTGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGATTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTT | + |
Preference number: 5 (lower is better) Translates to: RAVHKLPLLKTARSLEPRFLMRL*WREAEL Trigger: AAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGATTTCCACCTCTGTGCTaGTGCTGTTGGGGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: ASQGCAQAASSQDCKEPGFPPLC*CCWGVQ Trigger: TTGAACTCCCCAACAGCACAAGCACAGAGGTGGAAA...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCAGGAAGGTGGCTTGCTaGCGGGTGTTGGTCGGCCAG | + |
Preference number: 5 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCRKVAC*RVLVGQ Trigger: CTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCT...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGATTGTTCATCCGCCATTaGCAGAGGGCGATGGAGAGA | + |
Preference number: 5 (lower is better) Translates to: RAVHKLPLLKTARSLEPRLFIRH*QRAMER Trigger: TCTCTCCATCGCCCTCTGCAAATGGCGGATGAACAA...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS GCA 90 bp | ATCCAGAGAGGGAACACAATGGGAAAAACGATTAGGAAGGTGGCTTaGTTGCGGGTGTTGGTCGGCCAGGACAAGCTGAGGGGCTGGTCA | + |
Preference number: 5 (lower is better) Translates to: IQRGNTMGKTIRKVA*LRVLVGQDKLRGWS Trigger: TGACCAGCCCCTCAGCTTGTCCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTTTTCCCATTGTGTTCCCTCTCTGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | GTGTGTATCATGAGCTGGAAGATGCTATTCCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCGCCTCGTTGGAGGCGTGGCTTCGAC | + |
Preference number: 5 (lower is better) Translates to: VCIMSWKMLFLMRLL*REAELPPRWRRGFD Trigger: GTCGAAGCCACGCCTCCAACGAGGCGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAGCTCATGATACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CCA 90 bp | GTCGGGGCATCTGCAGCTTCAATGTTGTGGGAGAGGTTTCCATTCTaGACGGGTTCCGAAGCTTCGCTCGATGGCGTCATTTCCACCTCT | + |
Preference number: 5 (lower is better) Translates to: VGASAASMLWERFPF*TGSEASLDGVISTS Trigger: AGAGGTGGAAATGACGCCATCGAGCGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGATGCCCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 |
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CDS-3UTR CAA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAAAAGTTGGCCCATCCTaGTCCCCAGCTGTAGGTGAC | + |
Preference number: 5 (lower is better) Translates to: ILPPTFQGGILASQGCAQKVGPS*SPAVGD Trigger: GTCACCTACAGCTGGGGACAAGGATGGGCCAACTTT...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACATTGTTCATCCGCCATTaGCAGAGGGCGATGGAGAGA | + |
Preference number: 5 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTLFIRH*QRAMER Trigger: TCTCTCCATCGCCCTCTGCAAATGGCGGATGAACAA...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | TCATCTTCTTCCTCGGCAGTCGGGGCATCTGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGGACGGGTTCCGAAGCTTCGCTCGAT | + |
Preference number: 5 (lower is better) Translates to: SSSSSAVGASAASML*ERFPFWTGSEASLD Trigger: ATCGAGCGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGATGCCCCGACTGCCGAGGAAGAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 |
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CDS CCA 90 bp | TTCGGGGCATCTGCAGCTTCAATGTTGTGGGAGAGGTTTCCATTCTaGACGGGTTCCGAAGCTTCGCTCGATGGCGTCATTTCCACCTCT | + |
Preference number: 5 (lower is better) Translates to: FGASAASMLWERFPF*TGSEASLDGVISTS Trigger: AGAGGTGGAAATGACGCCATCGAGCGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGATGCCCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | CTTTCAGCGGCTCTCCATTCACATTCGTTATGCAGGACCCATGCCTaGCTGTCTCAGGGTAGACCTCGAAACACAGACTCTGGCAGTCAG | + |
Preference number: 5 (lower is better) Translates to: LSAALHSHSLCRTHA*LSQGRPRNTDSGSQ Trigger: CTGACTGCCAGAGTCTGTGTTTCGAGGTCTACCCTGAGACAGCCAGGCATGGGTCCTGCATAACGAATGTGAATGGAGAGCCGCTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS-3UTR CAA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAGGGAAAAGATGTCCTTaGGGTAGTCTCCCTGGGTGT | + |
Preference number: 5 (lower is better) Translates to: ILPPTFQGGILASQGCAQGKRCP*GSLPGC Trigger: ACACCCAGGGAGACTACCCAAAGGACATCTTTTCCC...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGACACCCATCTCTCTACTaGGACGTTGAACTTCATGAA | + |
Preference number: 5 (lower is better) Translates to: ASQGCAQAASSQDCKEPGHPSLY*DVELHE Trigger: TTCATGAAGTTCAACGTCCAAGTAGAGAGATGGGTG...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGTTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTT | + |
Preference number: 5 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVFLMRL*WREAEL Trigger: AAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAATTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTT | + |
Preference number: 5 (lower is better) Translates to: ILPPTFQGGILASQGCAQFLMRL*WREAEL Trigger: AAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAA...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTTTCCACCTCTGTGCTaGTGCTGTTGGGGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: GIHPSSNLPRRDTCLPGLFPPLC*CCWGVQ Trigger: TTGAACTCCCCAACAGCACAAGCACAGAGGTGGAAA...CAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | CTGAACCTCCCTTCAGCGAGTGGGTCAAGGGTGTGTATCATGAGCTaGAAGATGCTATTCCTCATGAGACTGTTGTGGAGGGAGGCAGAG | + |
Preference number: 5 (lower is better) Translates to: LNLPSASGSRVCIMS*KMLFLMRLLWREAE Trigger: CTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAGCTCATGATACACACCCTTGACCCACTCGCTGAAGGGAGGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107155.8 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACAAAGTTGGCCCATCCTaGTCCCCAGCTGTAGGTGAC | + |
Preference number: 5 (lower is better) Translates to: SECPHGNPSFLQPSKEGYKVGPS*SPAVGD Trigger: GTCACCTACAGCTGGGGACAAGGATGGGCCAACTTT...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GCCTCCCAGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAACTTGGCATTTCTTCTaGGCGATCTTGTGGAGAATT | + |
Preference number: 5 (lower is better) Translates to: ASQGCAQAASSQDCKEPGTWHFF*AILWRI Trigger: AATTCTCCACAAGATCGCCAAGAAGAAATGCCAAGT...TCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCTGGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGTTTCCACCTCTGTGCTaGTGCTGTTGGGGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: NPSFLQPSKEGYLPPRAVFPPLC*CCWGVQ Trigger: TTGAACTCCCCAACAGCACAAGCACAGAGGTGGAAA...CACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGTTTCCACCTCTGTGCTaGTGCTGTTGGGGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: PWESILPPTFQGGILASQFPPLC*CCWGVQ Trigger: TTGAACTCCCCAACAGCACAAGCACAGAGGTGGAAA...CTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCTCTGCAGCTTCAATGTaGTGGGAGAGGTTTCCATTC | + |
Preference number: 5 (lower is better) Translates to: IHPSSNLPRRDTCLPGLCSAASM*WERFPF Trigger: GAATGGAAACCTCTCCCACAACATTGAAGCTGCAGA...GCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGGGGAAAAGATGTCCTTaGGGTAGTCTCCCTGGGTGT | + |
Preference number: 5 (lower is better) Translates to: ECPHGNPSFLQPSKEGYLGKRCP*GSLPGC Trigger: ACACCCAGGGAGACTACCCAAAGGACATCTTTTCCC...CAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS TCA 90 bp | TTCTCCTCTGTTGCTCTGAGAGTCTGTCTCAGTAAAGGCACTGATTaGAAATGGGACAGTGCTCACAGCTACCAGGCCCATGACAAGGCC | + |
Preference number: 5 (lower is better) Translates to: FSSVALRVCLSKGTD*KWDSAHSYQAHDKA Trigger: GGCCTTGTCATGGGCCTGGTAGCTGTGAGCACTGTCCCATTTTCAATCAGTGCCTTTACTGAGACAGACTCTCAGAGCAACAGAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS GCA 90 bp | TGTTCTGGGTCTTTTCTTTCAGCGGCTCTCCATTCACATTCGTTATaGAGGACCCATGCCTGGCTGTCTCAGGGTAGACCTCGAAACACA | + |
Preference number: 5 (lower is better) Translates to: CSGSFLSAALHSHSL*RTHAWLSQGRPRNT Trigger: TGTGTTTCGAGGTCTACCCTGAGACAGCCAGGCATGGGTCCTGCATAACGAATGTGAATGGAGAGCCGCTGAAAGAAAAGACCCAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CCA 90 bp | GATCCAAGTTCTTCAGCGAGTGGGTCAAGGGTGTGTATCATGAGCTaGAAGATGCTATTCCTCATGAGACTGTTGTGGAGGGAGGCAGAG | + |
Preference number: 5 (lower is better) Translates to: DPSSSASGSRVCIMS*KMLFLMRLLWREAE Trigger: CTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAGCTCATGATACACACCCTTGACCCACTCGCTGAAGAACTTGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107157.9 ENSMUST00000146815.2 |
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CDS-3UTR CAA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACACTCTCTACTTGGACGTaGAACTTCATGAAAACCACA | + |
Preference number: 5 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTLSTWT*NFMKTT Trigger: TGTGGTTTTCATGAAGTTCAACGTCCAAGTAGAGAG...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGCACCCATCTCTCTACTaGGACGTTGAACTTCATGAA | + |
Preference number: 5 (lower is better) Translates to: PWESILPPTFQGGILASQHPSLY*DVELHE Trigger: TTCATGAAGTTCAACGTCCAAGTAGAGAGATGGGTG...CTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCACCCATCTCTCTACTaGGACGTTGAACTTCATGAA | + |
Preference number: 5 (lower is better) Translates to: VPMGIHPSSNLPRRDTCLHPSLY*DVELHE Trigger: TTCATGAAGTTCAACGTCCAAGTAGAGAGATGGGTG...GAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAATTGCGAGATATCATTaGCTTCACCCATCTCTCTAC | + |
Preference number: 5 (lower is better) Translates to: HPSSNLPRRDTCLPGLCTIARYH*LHPSLY Trigger: GTAGAGAGATGGGTGAAGCAAATGATATCTCGCAAT...TGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCATTGCGAGATATCATTaGCTTCACCCATCTCTCTAC | + |
Preference number: 5 (lower is better) Translates to: IHPSSNLPRRDTCLPGLCIARYH*LHPSLY Trigger: GTAGAGAGATGGGTGAAGCAAATGATATCTCGCAAT...GCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AGGGCTGTGCACAAGCTGCCTCTTCTCAAGACTGCAAGGAGCCTGGAGCCCAGATTCTTCTTGGCGATCTaGTGGAGAATTGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: RAVHKLPLLKTARSLEPRFFLAI*WRIEAF Trigger: AAAAGCTTCAATTCTCCACAAGATCGCCAAGAAGAA...TCTGGGCTCCAGGCTCCTTGCAGTCTTGAGAAGAGGCAGCTTGTGCACAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS TCA 90 bp | GCTACTCTGGGGCCACTCATATCACTGGCTTCTCCTCTGTTGCTCTaGGAGTCTGTCTCAGTAAAGGCACTGATTGAAAATGGGACAGTG | + |
Preference number: 5 (lower is better) Translates to: ATLGPLISLASPLLL*ESVSVKALIENGTV Trigger: CACTGTCCCATTTTCAATCAGTGCCTTTACTGAGACAGACTCTCAGAGCAACAGAGGAGAAGCCAGTGATATGAGTGGCCCCAGAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAATTGCGAGATATCATTaGCTTCACCCATCTCTCTAC | + |
Preference number: 5 (lower is better) Translates to: ILPPTFQGGILASQGCAQIARYH*LHPSLY Trigger: GTAGAGAGATGGGTGAAGCAAATGATATCTCGCAAT...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | TCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCATTGCGAGATATCATTaGCTTCACCCATCTCTCTAC | + |
Preference number: 5 (lower is better) Translates to: SPWESILPPTFQGGILASIARYH*LHPSLY Trigger: GTAGAGAGATGGGTGAAGCAAATGATATCTCGCAAT...GGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAATCTGGCACTGTCACCTaGATAACATTATTGCGAGAT | + |
Preference number: 5 (lower is better) Translates to: ILPPTFQGGILASQGCAQSGTVT*ITLLRD Trigger: ATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGA...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCCTCCCAGGGCTGTGCACAAACTTGGCATTTCTTCTaGGCGATCTTGTGGAGAATT | + |
Preference number: 5 (lower is better) Translates to: ILPPTFQGGILASQGCAQTWHFF*AILWRI Trigger: AATTCTCCACAAGATCGCCAAGAAGAAATGCCAAGT...TTGTGCACAGCCCTGGGAGGCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AGTGAATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTCTGCAGCTTCAATGTaGTGGGAGAGGTTTCCATTC | + |
Preference number: 5 (lower is better) Translates to: SECPHGNPSFLQPSKEGYSAASM*WERFPF Trigger: GAATGGAAACCTCTCCCACAACATTGAAGCTGCAGA...GTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATAGGAATTCTGAGAGCTTaGCTTGGGCTTCTGGCACTG | + |
Preference number: 5 (lower is better) Translates to: NWRCRGVGQLSLVRSRYIGILRA*LGLLAL Trigger: CAGTGCCAGAAGCCCAAGCAAAGCTCTCAGAATTCC...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
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CDS CCA 90 bp | CATTTAAGTCTAAGAGAGTTCTTTGACGGTGACCCTGTGCTACTCTaGGGCCACTCATATCACTGGCTTCTCCTCTGTTGCTCTGAGAGT | + |
Preference number: 5 (lower is better) Translates to: HLSLREFFDGDPVLL*GHSYHWLLLCCSES Trigger: ACTCTCAGAGCAACAGAGGAGAAGCCAGTGATATGAGTGGCCCCAGAGTAGCACAGGGTCACCGTCAAAGAACTCTCTTAGACTTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 90 bp | GGTAAAGTTGGCCCATCCTTGTCCCCAGCTGTAGGTGACTTTGCTTaGGCTTCTGGCACTGTCACCTTGATAACATTATTGCGAGATATC | + |
Preference number: 5 (lower is better) Translates to: GKVGPSLSPAVGDFA*ASGTVTLITLLRDI Trigger: GATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGTCACCTACAGCTGGGGACAAGGATGGGCCAACTTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS-3UTR CAA 90 bp | TCCTCTTCCTTGACTGTCAAATCTGATGCTCTTTGCTTTGGGATTCCAAGTGTGAAAGTTGGCCCATCCTaGTCCCCAGCTGTAGGTGAC | + |
Preference number: 5 (lower is better) Translates to: SSSLTVKSDALCFGIPSVKVGPS*SPAVGD Trigger: GTCACCTACAGCTGGGGACAAGGATGGGCCAACTTT...CACACTTGGAATCCCAAAGCAAAGAGCATCAGATTTGACAGTCAAGGAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCTCTGGCACTGTCACCTaGATAACATTATTGCGAGAT | + |
Preference number: 5 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCSGTVT*ITLLRD Trigger: ATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGA...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCACTTGGCATTTCTTCTaGGCGATCTTGTGGAGAATT | + |
Preference number: 5 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCTWHFF*AILWRI Trigger: AATTCTCCACAAGATCGCCAAGAAGAAATGCCAAGT...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATTGGCGGTGTAGGGGAGTTGGCCAACTCTCTCTGGTCAGGAGTAGATATATATCTGCAGCTTCAATGTaGTGGGAGAGGTTTCCATTC | + |
Preference number: 5 (lower is better) Translates to: NWRCRGVGQLSLVRSRYISAASM*WERFPF Trigger: GAATGGAAACCTCTCCCACAACATTGAAGCTGCAGA...TATATATCTACTCCTGACCAGAGAGAGTTGGCCAACTCCCCTACACCGCCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATGTAATTTGCTGCCAGCCAGTCCCATTTTCTACTGAAATAAACCTTGTAGAAAGGAAGGTGGCTTGCTaGCGGGTGTTGGTCGGCCAG | + |
Preference number: 5 (lower is better) Translates to: NVICCQPVPFSTEINLVERKVAC*RVLVGQ Trigger: CTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCT...TTCTACAAGGTTTATTTCAGTAGAAAATGGGACTGGCTGGCAGCAAATTACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GGGGGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAGTTGGCCCATCCTaGTCCCCAGCTGTAGGTGAC | + |
Preference number: 5 (lower is better) Translates to: GGKGLELLNIYTVTIAGRKVGPS*SPAVGD Trigger: GTCACCTACAGCTGGGGACAAGGATGGGCCAACTTT...TCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATGTCCCCATGGGAATCCATCCTTCCTCCAACCTTCCAAGGAGGGATACTTGCTTCTTCTTGGCGATCTaGTGGAGAATTGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: NVPMGIHPSSNLPRRDTCFFLAI*WRIEAF Trigger: AAAAGCTTCAATTCTCCACAAGATCGCCAAGAAGAA...GCAAGTATCCCTCCTTGGAAGGTTGGAGGAAGGATGGATTCCCATGGGGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | ATATTGTCTGTCAGCAGACCCAGTAGACTTGCACACACTGCCATGCAAGAAAGACACCCATCTCTCTACTaGGACGTTGAACTTCATGAA | + |
Preference number: 5 (lower is better) Translates to: ILSVSRPSRLAHTAMQERHPSLY*DVELHE Trigger: TTCATGAAGTTCAACGTCCAAGTAGAGAGATGGGTG...TCTTTCTTGCATGGCAGTGTGTGCAAGTCTACTGGGTCTGCTGACAGACAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS GCA 90 bp | GCTTCTGGCACTGTCACCTTGATAACATTATTGCGAGATATCATTTaGTTCACCCATCTCTCTACTTGGACGTTGAACTTCATGAAAACC | + |
Preference number: 5 (lower is better) Translates to: ASGTVTLITLLRDII*FTHLSTWTLNFMKT Trigger: GGTTTTCATGAAGTTCAACGTCCAAGTAGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | CAGATATTTTTCTTTAGGACAAGTTGTCTGTTCAAGCCTAAGATTATTGATGGGTCTGCAGCTTCAATGTaGTGGGAGAGGTTTCCATTC | + |
Preference number: 5 (lower is better) Translates to: QIFFFRTSCLFKPKIIDGSAASM*WERFPF Trigger: GAATGGAAACCTCTCCCACAACATTGAAGCTGCAGA...CCCATCAATAATCTTAGGCTTGAACAGACAACTTGTCCTAAAGAAAAATATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | AATGTAATTTGCTGCCAGCCAGTCCCATTTTCTACTGAAATAAACCTTGTAGAATCTGGCACTGTCACCTaGATAACATTATTGCGAGAT | + |
Preference number: 5 (lower is better) Translates to: NVICCQPVPFSTEINLVESGTVT*ITLLRD Trigger: ATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGA...TTCTACAAGGTTTATTTCAGTAGAAAATGGGACTGGCTGGCAGCAAATTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAATCTGGCACTGTCACCTaGATAACATTATTGCGAGAT | + |
Preference number: 5 (lower is better) Translates to: GKGLELLNIYTVTIAGRKSGTVT*ITLLRD Trigger: ATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGA...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAAACTTGGCATTTCTTCTaGGCGATCTTGTGGAGAATT | + |
Preference number: 5 (lower is better) Translates to: GKGLELLNIYTVTIAGRKTWHFF*AILWRI Trigger: AATTCTCCACAAGATCGCCAAGAAGAAATGCCAAGT...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS-3UTR CAA 90 bp | GGTAAAGGCCTAGAACTTTTGAATATTTACACTGTGACAATAGCAGGAAGAAAATTCTTCTTGGCGATCTaGTGGAGAATTGAAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: GKGLELLNIYTVTIAGRKFFLAI*WRIEAF Trigger: AAAAGCTTCAATTCTCCACAAGATCGCCAAGAAGAA...TTTTCTTCCTGCTATTGTCACAGTGTAAATATTCAAAAGTTCTAGGCCTTTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 72 bp | AGACTGTTGTGGAGGGAGGCAGAGCTTCCGCCTCGTTaGAGGCGTGGCTTCGACGGTAAAGTTGGCCCATCC | + |
Preference number: 6 (lower is better) Translates to: RLLWREAELPPR*RRGFDGKVGPS Trigger: GGATGGGCCAACTTTACCGTCGAAGCCACGCCTCCAACGAGGCGGAAGCTCTGCCTCCCTCCACAACAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CCA 72 bp | TTGCGGGTGTTGGTCGGCCAGGACAAGCTGAGGGGCTaGTCATCTTCTTCCTCGGCAGTCTCTGTGGCCTTC | + |
Preference number: 6 (lower is better) Translates to: LRVLVGQDKLRG*SSSSSAVSVAF Trigger: GAAGGCCACAGAGACTGCCGAGGAAGAAGATGACCAGCCCCTCAGCTTGTCCTGGCCGACCAACACCCGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 72 bp | TCCTCGGCAGTCGGGGCATCTGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGGACGGGTTCCGAAGCT | + |
Preference number: 6 (lower is better) Translates to: SSAVGASAASML*ERFPFWTGSEA Trigger: AGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGATGCCCCGACTGCCGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 |
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CDS CAA 72 bp | TGGAGGCGTGGCTTCGACGGTAAAGTTGGCCCATCCTaGTCCCCAGCTGTAGGTGACTTTGCTTGGGCTTCT | + |
Preference number: 6 (lower is better) Translates to: WRRGFDGKVGPS*SPAVGDFAWAS Trigger: AGAAGCCCAAGCAAAGTCACCTACAGCTGGGGACAAGGATGGGCCAACTTTACCGTCGAAGCCACGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS CAA 72 bp | GGAAAAACGATTAGGAAGGTGGCTTGCTTGCGGGTGTaGGTCGGCCAGGACAAGCTGAGGGGCTGGTCATCT | + |
Preference number: 6 (lower is better) Translates to: GKTIRKVACLRV*VGQDKLRGWSS Trigger: AGATGACCAGCCCCTCAGCTTGTCCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CAA 72 bp | TGGAGGCGTGGCTTCGACGGTAAAGTTGGCCCATCCTaGTCCCCAGCTGTAGGTGACTCTTCCATACAGCTG | + |
Preference number: 6 (lower is better) Translates to: WRRGFDGKVGPS*SPAVGDSSIQL Trigger: CAGCTGTATGGAAGAGTCACCTACAGCTGGGGACAAGGATGGGCCAACTTTACCGTCGAAGCCACGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CAA 90 bp | AGGGTGTGTATCATGAGCTGGAAGATGCTATTCCTCATGAGACTGTaGTGGAGGGAGGCAGAGCTTCCGCCTCGTTGGAGGCGTGGCTTC | + |
Preference number: 6 (lower is better) Translates to: RVCIMSWKMLFLMRL*WREAELPPRWRRGF Trigger: GAAGCCACGCCTCCAACGAGGCGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAGCTCATGATACACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CCA 72 bp | ATGAGCTGGAAGATGCTATTCCTCATGAGACTGTTGTaGAGGGAGGCAGAGCTTCCGCCTCGTTGGAGGCGT | + |
Preference number: 6 (lower is better) Translates to: MSWKMLFLMRLL*REAELPPRWRR Trigger: ACGCCTCCAACGAGGCGGAAGCTCTGCCTCCCTCCACAACAGTCTCATGAGGAATAGCATCTTCCAGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CCA 72 bp | TCTGTGGCCTTCGGGGCATCTGCAGCTTCAATGTTGTaGGAGAGGTTTCCATTCTGGACGGGTTCCGAAGCT | + |
Preference number: 6 (lower is better) Translates to: SVAFGASAASML*ERFPFWTGSEA Trigger: AGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGATGCCCCGAAGGCCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CAA 90 bp | AACACAATGGGAAAAACGATTAGGAAGGTGGCTTGCTTGCGGGTGTaGGTCGGCCAGGACAAGCTGAGGGGCTGGTCATCTTCTTCCTCG | + |
Preference number: 6 (lower is better) Translates to: NTMGKTIRKVACLRV*VGQDKLRGWSSSSS Trigger: CGAGGAAGAAGATGACCAGCCCCTCAGCTTGTCCTGGCCGACCAACACCCGCAAGCAAGCCACCTTCCTAATCGTTTTTCCCATTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CAA 90 bp | GTCCTTTGGGTAGTCTCCCTGGGTGTGCTCAGTACTGTTCTCAGCTaGGTCTTCCTGAGAAGCAGGTGGCTGTGGGGTGTAATCTCGAAT | + |
Preference number: 6 (lower is better) Translates to: VLWVVSLGVLSTVLS*VFLRSRWLWGVISN Trigger: ATTCGAGATTACACCCCACAGCCACCTGCTTCTCAGGAAGACCAAGCTGAGAACAGTACTGAGCACACCCAGGGAGACTACCCAAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 72 bp | CTAAGAGAGTTCTTTGACGGTGACCCTGTGCTACTCTaGGGCCACTCATATCACTGGCTTCTCCTCTGTTGC | + |
Preference number: 6 (lower is better) Translates to: LREFFDGDPVLL*GHSYHWLLLCC Trigger: GCAACAGAGGAGAAGCCAGTGATATGAGTGGCCCCAGAGTAGCACAGGGTCACCGTCAAAGAACTCTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 72 bp | TCTGCAGCTTCAATGTTGTGGGAGAGGTTTCCATTCTaGACGGGTTCCGAAGCTTCGCTCGATGGCGTCATT | + |
Preference number: 6 (lower is better) Translates to: SAASMLWERFPF*TGSEASLDGVI Trigger: AATGACGCCATCGAGCGAAGCTTCGGAACCCGTCCAGAATGGAAACCTCTCCCACAACATTGAAGCTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CCA 72 bp | GCTCTCCATTCACATTCGTTATGCAGGACCCATGCCTaGCTGTCTCAGGGTAGACCTCGAAACACAGACTCT | + |
Preference number: 6 (lower is better) Translates to: ALHSHSLCRTHA*LSQGRPRNTDS Trigger: AGAGTCTGTGTTTCGAGGTCTACCCTGAGACAGCCAGGCATGGGTCCTGCATAACGAATGTGAATGGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS TCA 72 bp | GCGGAACCCACGATGGTGCCAATGCCGACATTGCTGTaGGCAATGAAGACCCCTATAAGAGACGTGAAAAGT | + |
Preference number: 6 (lower is better) Translates to: AEPTMVPMPTLL*AMKTPIRDVKS Trigger: ACTTTTCACGTCTCTTATAGGGGTCTTCATTGCTCACAGCAATGTCGGCATTGGCACCATCGTGGGTTCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS GCA 72 bp | TCTTTTCTTTCAGCGGCTCTCCATTCACATTCGTTATaGAGGACCCATGCCTGGCTGTCTCAGGGTAGACCT | + |
Preference number: 6 (lower is better) Translates to: SFLSAALHSHSL*RTHAWLSQGRP Trigger: AGGTCTACCCTGAGACAGCCAGGCATGGGTCCTGCATAACGAATGTGAATGGAGAGCCGCTGAAAGAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS TCA 72 bp | TTTCCTGCTATTATAATGTCTCCTGCAGCCAAATGGTaGCTCATGGGAACACCATTTCTGCAGGAGCCTGGC | + |
Preference number: 6 (lower is better) Translates to: FPAIIMSPAAKW*LMGTPFLQEPG Trigger: GCCAGGCTCCTGCAGAAATGGTGTTCCCATGAGTCACCATTTGGCTGCAGGAGACATTATAATAGCAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CAA 90 bp | GCAGCCCCATTCTGCCTCTCATTCTCATCCACTTGGCATTTCTTCTaGGCGATCTTGTGGAGAATTGAAGCTTTTTCTCTGAACCTCCCT | + |
Preference number: 6 (lower is better) Translates to: AAPFCLSFSSTWHFF*AILWRIEAFSLNLP Trigger: AGGGAGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATCGCCAAGAAGAAATGCCAAGTGGATGAGAATGAGAGGCAGAATGGGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 ENSMUST00000146815.2 |
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CDS CAA 90 bp | TCCCCAGCTGTAGGTGACTTTGCTTGGGCTTCTGGCACTGTCACCTaGATAACATTATTGCGAGATATCATTTGCTTCACCCATCTCTCT | + |
Preference number: 6 (lower is better) Translates to: SPAVGDFAWASGTVT*ITLLRDIICFTHLS Trigger: AGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGTCACCTACAGCTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS TCA 72 bp | GGGCCACTCATATCACTGGCTTCTCCTCTGTTGCTCTaGGAGTCTGTCTCAGTAAAGGCACTGATTGAAAAT | + |
Preference number: 6 (lower is better) Translates to: GPLISLASPLLL*ESVSVKALIEN Trigger: ATTTTCAATCAGTGCCTTTACTGAGACAGACTCTCAGAGCAACAGAGGAGAAGCCAGTGATATGAGTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS TCA 72 bp | ACTTCCTGGAAGCAGGTTTTCGGACGTCAGGTAAGGTaGTCCAGAGAGGGAACACAATGGGAAAAACGATTA | + |
Preference number: 6 (lower is better) Translates to: TSWKQVFGRQVR*SREGTQWEKRL Trigger: TAATCGTTTTTCCCATTGTGTTCCCTCTCTGGATCACCTTACCTGACGTCCGAAAACCTGCTTCCAGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS TCA 72 bp | CACTTGGCATTTCTTCTTGGCGATCTTGTGGAGAATTaGAGCTTTTTCTCTGAACCTCCCTTCAGCGAGTGG | + |
Preference number: 6 (lower is better) Translates to: HLAFLLGDLVEN*SFFSEPPFSEW Trigger: CCACTCGCTGAAGGGAGGTTCAGAGAAAAAGCTTCAATTCTCCACAAGATCGCCAAGAAGAAATGCCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107155.8 ENSMUST00000107158.9 |
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CDS CAA 90 bp | GGTGACTTTGCTTGGGCTTCTGGCACTGTCACCTTGATAACATTATaGCGAGATATCATTTGCTTCACCCATCTCTCTACTTGGACGTTG | + |
Preference number: 6 (lower is better) Translates to: GDFAWASGTVTLITL*RDIICFTHLSTWTL Trigger: CAACGTCCAAGTAGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS CAA 90 bp | GAGAGCTTTGCTTGGGCTTCTGGCACTGTCACCTTGATAACATTATaGCGAGATATCATTTGCTTCACCCATCTCTCTACTTGGACGTTG | + |
Preference number: 6 (lower is better) Translates to: ESFAWASGTVTLITL*RDIICFTHLSTWTL Trigger: CAACGTCCAAGTAGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
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CDS CAA 90 bp | GGAGGGAATTCTGAGAGCTTTGCTTGGGCTTCTGGCACTGTCACCTaGATAACATTATTGCGAGATATCATTTGCTTCACCCATCTCTCT | + |
Preference number: 6 (lower is better) Translates to: GGNSESFAWASGTVT*ITLLRDIICFTHLS Trigger: AGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGCTCTCAGAATTCCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107158.9 |
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CDS CAA 72 bp | GCTTGGGCTTCTGGCACTGTCACCTTGATAACATTATaGCGAGATATCATTTGCTTCACCCATCTCTCTACT | + |
Preference number: 6 (lower is better) Translates to: AWASGTVTLITL*RDIICFTHLST Trigger: AGTAGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CAA 72 bp | GTAGGTGACTTTGCTTGGGCTTCTGGCACTGTCACCTaGATAACATTATTGCGAGATATCATTTGCTTCACC | + |
Preference number: 6 (lower is better) Translates to: VGDFAWASGTVT*ITLLRDIICFT Trigger: GGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGTCACCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 |
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CDS GCA 72 bp | ACTGTCACCTTGATAACATTATTGCGAGATATCATTTaGTTCACCCATCTCTCTACTTGGACGTTGAACTTC | + |
Preference number: 6 (lower is better) Translates to: TVTLITLLRDII*FTHLSTWTLNF Trigger: GAAGTTCAACGTCCAAGTAGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |
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CDS CAA 72 bp | CACTGTCACCTTGATAACATTATTGCGAGATATCATTaGCTTCACCCATCTCTCTACTTGGACGTTGAACTT | + |
Preference number: 6 (lower is better) Translates to: HCHLDNIIARYH*LHPSLYLDVEL Trigger: AAGTTCAACGTCCAAGTAGAGAGATGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044990.11 ENSMUST00000107155.8 ENSMUST00000107157.9 ENSMUST00000107158.9 |