RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC24A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034452

Ensembl transcript IDs: ENSMUST00000037798.8

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGCCAGATTTGGCCCTCTGCAAATGCATCCCTTTGGCTCTTCAGTaGCAGTTGTCACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: PPDLALCKCIPLALQ*QLSLLGKKMPKGSR
Trigger: CCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTGACAACTGTCACTGAAGAGCCAAAGGGATGCATTTGCAGAGGGCCAAATCTGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR TCA 90 bp CATCTTTTAATCCCGGCACTCAGGAGGCAGGGGCAGGTAGGTGTGTaGCTCCAAGGCCAGCCTGGTCTGTGTAACGAGCAGTACTCTTTC +
Preference number: 1 (lower is better)
Translates to: HLLIPALRRQGQVGV*LQGQPGLCNEQYSF
Trigger: GAAAGAGTACTGCTCGTTACACAGACCAGGCTGGCCTTGGAGTCACACACCTACCTGCCCCTGCCTCCTGAGTGCCGGGATTAAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CCA 90 bp TCTGCAAATGCATCCCTTTGGCTCTTCAGTGACAGTTGTCACTCCTaGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAAT +
Preference number: 1 (lower is better)
Translates to: SANASLWLFSDSCHS*ARKCPRAAGQLCQN
Trigger: ATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTGACAACTGTCACTGAAGAGCCAAAGGGATGCATTTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp TCCCTTTGGCTCTTCAGTGACAGTTGTCACTCCTGGGCAAGAAAATaGCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGAAG +
Preference number: 1 (lower is better)
Translates to: SLWLFSDSCHSWARK*PRAAGQLCQNNPLK
Trigger: CTTCAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTGACAACTGTCACTGAAGAGCCAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR TCA 90 bp AACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTaGCAAGGGAATTGTGAGCAAGGGTACTTGTCTAATTTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: NKPLTPACCTMALQE*QGNCEQGYLSNFCH
Trigger: ATGGCAGAAATTAGACAAGTACCCTTGCTCACAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR TCA 90 bp ATTCCTGCCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTaGACTCACAATGACAGCAAACCTGATGTGGCTTCACAATTCCAC +
Preference number: 1 (lower is better)
Translates to: IPAPASKPSLLKLIN*THNDSKPDVASQFH
Trigger: GTGGAATTGTGAAGCCACATCAGGTTTGCTGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGGCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp AGAGAAGCCTCAGTCATAATGACAGTCACCTCTGAGGGTCTACGCTaGCCGGCTCACATTCCTGATCATGTTCATTATTTGATTGGTATG +
Preference number: 1 (lower is better)
Translates to: REASVIMTVTSEGLR*PAHIPDHVHYLIGM
Trigger: CATACCAATCAAATAATGAACATGATCAGGAATGTGAGCCGGGCAGCGTAGACCCTCAGAGGTGACTGTCATTATGACTGAGGCTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp CTTCAGGTCTCATACAGGAAGTCCTCTGACTGCATGACAGCTGCTTaGCTGAGTGATAAAAACTCTCCCTTCCAAGGTAACGTTCTTAAT +
Preference number: 1 (lower is better)
Translates to: LQVSYRKSSDCMTAA*LSDKNSPFQGNVLN
Trigger: ATTAAGAACGTTACCTTGGAAGGGAGAGTTTTTATCACTCAGGCAAGCAGCTGTCATGCAGTCAGAGGACTTCCTGTATGAGACCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp CAAGGCCAGCCTGGTCTGTGTAACGAGCAGTACTCTTTCATTTCTTaGTGTGTCGTCATTGCGCTAAGCAGTTTTGAAATTTCTCCTTTG +
Preference number: 1 (lower is better)
Translates to: QGQPGLCNEQYSFIS*CVVIALSSFEISPL
Trigger: CAAAGGAGAAATTTCAAAACTGCTTAGCGCAATGACGACACAGCAAGAAATGAAAGAGTACTGCTCGTTACACAGACCAGGCTGGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp TCACAGGCTACCACATCACTCCTGGTGTCTATGACATACATCATTTaGATCATAATCTGCAGACGCTCATGTTCCTTGTGCTCTGAAACC +
Preference number: 1 (lower is better)
Translates to: SQATTSLLVSMTYII*IIICRRSCSLCSET
Trigger: GGTTTCAGAGCACAAGGAACATGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGATGTGGTAGCCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CCA 90 bp TCATGTTCATTATTTGATTGGTATGGTAAGAGGGACGGTAACTTCTaGCATAGTCCTCTCCTCTATGTCCATCTTGAGCATCAGTGGCTG +
Preference number: 1 (lower is better)
Translates to: SCSLFDWYGKRDGNF*HSPLLYVHLEHQWL
Trigger: CAGCCACTGATGCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTACCATACCAATCAAATAATGAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp ACATCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTaGAGACGCTCATGTTCCTTGTGCTCTGAAACCAAAGACGTGAAA +
Preference number: 1 (lower is better)
Translates to: TSLLVSMTYIICIII*RRSCSLCSETKDVK
Trigger: TTTCACGTCTTTGGTTTCAGAGCACAAGGAACATGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 90 bp AAGTGGCCACTGATGGAGACAAACAAATGTGGATTTTCCAGGAAGTaGATATGTTTACATAGCCCTAAGAGTAGTTTTCTTCCTCAAATC +
Preference number: 1 (lower is better)
Translates to: KWPLMETNKCGFSRK*ICLHSPKSSFLPQI
Trigger: GATTTGAGGAAGAAAACTACTCTTAGGGCTATGTAAACATATGCACTTCCTGGAAAATCCACATTTGTTTGTCTCCATCAGTGGCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR TCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACAAGGAGAACAAGCCTTTaGCCCCTGCATGCTGCACCA +
Preference number: 2 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTRRTSL*PLHAAP
Trigger: TGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCT...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR GCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACACAAGCCTTTGACCCCTaGATGCTGCACCATGGCTCT +
Preference number: 2 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTQAFDP*MLHHGS
Trigger: AGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTG...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR GCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGACCTTTGACCCCTGCATaGTGCACCATGGCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: LALQSSLGWHISIALSPRPLTPA*CTMALQ
Trigger: CTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGG...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CCA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGGGAATAAATAGCGTGTaGCAGTGTGTGTTTAGGGCA +
Preference number: 2 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLGINSV*QCVFRA
Trigger: TGCCCTAAACACACACTGCCACACGCTATTTATTCC...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 90 bp AGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTaGAAGTGGCCACTGATGGAGACAAACAAATGTGGATTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: RKCPRAAGQLCQNNP*KWPLMETNKCGFSR
Trigger: CCTGGAAAATCCACATTTGTTTGTCTCCATCAGTGGCCACTTCAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCACTGCATGCTGCACCATaGCTCTTCAGGAGTGACAAG +
Preference number: 2 (lower is better)
Translates to: SLLVSMTYIICIIICRRSLHAAP*LFRSDK
Trigger: CTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAG...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR TCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGAATGGCTCTTCAGGAGTaGCAAGGGAATTGTGAGCAA +
Preference number: 2 (lower is better)
Translates to: LALQSSLGWHISIALSPRMALQE*QGNCEQ
Trigger: TTGCTCACAATTCCCTTGTCACTCCTGAAGAGCCAT...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCATCCTGGGCAAGAAAATaGCCAAGGGCAGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSSWARK*PRAAGQ
Trigger: CTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGA...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCAGACAGTTGTCACTCCTaGGCAAGAAAATGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: SLLVSMTYIICIIICRRSDSCHS*ARKCPR
Trigger: CCTTGGGCATTTTCTTGCCCAGGAGTGACAACTGTC...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR TCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCACCTTTGGCTCTTCAGTaGCAGTTGTCACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSPLALQ*QLSLLG
Trigger: GCCCAGGAGTGACAACTGTCACTGAAGAGCCAAAGG...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR GCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCACAGAAAGCATTGGCATaGGTTTTCACAGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: SLLVSMTYIICIIICRRSQKALA*VFTGLW
Trigger: CCACAGTCCTGTGAAAACGCATGCCAATGCTTTCTG...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR GCA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTACCAGATTTGGCCCTCTaGAAATGCATCCCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLPDLAL*KCIPLA
Trigger: AGCCAAAGGGATGCATTTGCAGAGGGCCAAATCTGG...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACATGTTCATTATTTGATTaGTATGGTAAGAGGGACGGT +
Preference number: 2 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTCSLFD*YGKRDG
Trigger: ACCGTCCCTCTTACCATACCAATCAAATAATGAACA...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR GCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTGAAGCTGCAGGTGTTTaGAGAGAGAAGCCTCAGTCA +
Preference number: 2 (lower is better)
Translates to: SSFLPQILASNSSQITDFEAAGV*REKPQS
Trigger: TGACTGAGGCTTCTCTCTGCAAACACCTGCAGCTTC...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGAGTTTTCACAGGACTGTaGGGTAGAATGATAAATTTA +
Preference number: 2 (lower is better)
Translates to: LALQSSLGWHISIALSPRVFTGL*GRMINL
Trigger: TAAATTTATCATTCTACCCCACAGTCCTGTGAAAAC...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 90 bp ATGACATACATCATTTGCATCATAATCTGCAGACGCTCATGTTCCTaGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTC +
Preference number: 2 (lower is better)
Translates to: MTYIICIIICRRSCS*CSETKDVKVLFLTF
Trigger: GAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGAACATGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 72 bp TTAGGGCAGTGTTCAGGAGAACAAGCCTTTGACCCCTaGATGCTGCACCATGGCTCTTCAGGAGTGACAAGG +
Preference number: 3 (lower is better)
Translates to: LGQCSGEQAFDP*MLHHGSSGVTR
Trigger: CCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACACTGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR TCA 72 bp TTGGCCCTCTGCAAATGCATCCCTTTGGCTCTTCAGTaGCAGTTGTCACTCCTGGGCAAGAAAATGCCCAAG +
Preference number: 3 (lower is better)
Translates to: LALCKCIPLALQ*QLSLLGKKMPK
Trigger: CTTGGGCATTTTCTTGCCCAGGAGTGACAACTGTCACTGAAGAGCCAAAGGGATGCATTTGCAGAGGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CCA 72 bp GGCTTCACAATTCCACCAGGAGGAATAAATAGCGTGTaGCAGTGTGTGTTTAGGGCAGTGTTCAGGAGAACA +
Preference number: 3 (lower is better)
Translates to: GFTIPPGGINSV*QCVFRAVFRRT
Trigger: TGTTCTCCTGAACACTGCCCTAAACACACACTGCCACACGCTATTTATTCCTCCTGGTGGAATTGTGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 72 bp TCATACAGGAAGTCCTCTGACTGCATGACAGCTGCTTaGCTGAGTGATAAAAACTCTCCCTTCCAAGGTAAC +
Preference number: 3 (lower is better)
Translates to: SYRKSSDCMTAA*LSDKNSPFQGN
Trigger: GTTACCTTGGAAGGGAGAGTTTTTATCACTCAGGCAAGCAGCTGTCATGCAGTCAGAGGACTTCCTGTATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CAA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTACAGGAGAACAAGCCTTaGACCCCTGCATGCTGCACC +
Preference number: 3 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLQENKP*TPACCT
Trigger: GGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTG...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR TCA 72 bp CCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTaGACTCACAATGACAGCAAACCTGATGTGGCTTCA +
Preference number: 3 (lower is better)
Translates to: PASKPSLLKLIN*THNDSKPDVAS
Trigger: TGAAGCCACATCAGGTTTGCTGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 72 bp ACCACATCACTCCTGGTGTCTATGACATACATCATTTaGATCATAATCTGCAGACGCTCATGTTCCTTGTGC +
Preference number: 3 (lower is better)
Translates to: TTSLLVSMTYII*IIICRRSCSLC
Trigger: GCACAAGGAACATGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGATGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CCA 72 bp AGGACTAGCCTTCTTGCTTTACAGTCTAGTCTAGGTTaGCATATAAGCATAGCACTGAGCCCTAGATCTCTT +
Preference number: 3 (lower is better)
Translates to: RTSLLALQSSLG*HISIALSPRSL
Trigger: AAGAGATCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAGAAGGCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 72 bp CCTGGTCTGTGTAACGAGCAGTACTCTTTCATTTCTTaGTGTGTCGTCATTGCGCTAAGCAGTTTTGAAATT +
Preference number: 3 (lower is better)
Translates to: PGLCNEQYSFIS*CVVIALSSFEI
Trigger: AATTTCAAAACTGCTTAGCGCAATGACGACACAGCAAGAAATGAAAGAGTACTGCTCGTTACACAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CCA 72 bp TTATTTGATTGGTATGGTAAGAGGGACGGTAACTTCTaGCATAGTCCTCTCCTCTATGTCCATCTTGAGCAT +
Preference number: 3 (lower is better)
Translates to: LFDWYGKRDGNF*HSPLLYVHLEH
Trigger: ATGCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTACCATACCAATCAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 72 bp CTGGTGTCTATGACATACATCATTTGCATCATAATCTaGAGACGCTCATGTTCCTTGTGCTCTGAAACCAAA +
Preference number: 3 (lower is better)
Translates to: LVSMTYIICIII*RRSCSLCSETK
Trigger: TTTGGTTTCAGAGCACAAGGAACATGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR-3UTR CAA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTAGCTATTATCTTCCTTTaGACACAGAAAGCATTGGCA +
Preference number: 3 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLAIIFL*TQKALA
Trigger: TGCCAATGCTTTCTGTGTCAAAAGGAAGATAATAGC...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR TCA 72 bp CATCATAATCTGCAGACGCTCATGTTCCTTGTGCTCTaGAACCAAAGACGTGAAAGTTTTATTTCTAACATT +
Preference number: 3 (lower is better)
Translates to: HHNLQTLMFLVL*NQRRESFISNI
Trigger: AATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGAACATGAGCGTCTGCAGATTATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR GCA 72 bp ATTTGCATCATAATCTGCAGACGCTCATGTTCCTTGTaGTCTGAAACCAAAGACGTGAAAGTTTTATTTCTA +
Preference number: 3 (lower is better)
Translates to: ICIIICRRSCSL*SETKDVKVLFL
Trigger: TAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGAACATGAGCGTCTGCAGATTATGATGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATGTGGGGCTGATGGTGTaGGCACCTGCTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNVGLMV*APAGDG
Trigger: CCCATCTCCAGCAGGTGCTCACACCATCAGCCCCAC...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGGGTCTCCCAGGGCCATaGCTTTGGCTACGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLGLPGP*LWLRAS
Trigger: GGAGGCCCGTAGCCAAAGTCATGGCCCTGGGAGACC...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp GTAAGAGGGACGGTAACTTCTGGCATAGTCCTCTCCTCTATGTCCATCTTGAGCGAGGTGGCAGGGGTGTaGTGTGGGACCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VRGTVTSGIVLSSMSILSEVAGV*CGTAPW
Trigger: CCAGGGAGCGGTCCCACAGCACACCCCTGCCACCTC...GCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGGTTTCGCCAACCTGGTaGGCCCACCATACCATGAGG +
Preference number: 4 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELVSPTW*AHHTMR
Trigger: CCTCATGGTATGGTGGGCTCACCAGGTTGGCGAAAC...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGCCTTTTTCCCTGGCGTaGGTTGGGCTGGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELPFSLA*VGLEFF
Trigger: GAAGAACTCCAGCCCAACTCACGCCAGGGAAAAAGG...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACAGGCAGGGGTGTGCTGTaGGACCGCTCCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTGRGVL*DRSLGS
Trigger: ACTCCCCAGGGAGCGGTCCCACAGCACACCCCTGCC...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTCGATCCTCCACACTaGACAGGTCTGGGGGATACT +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGVDPPH*TGLGDT
Trigger: AGTATCCCCCAGACCTGTTCAGTGTGGAGGATCGAC...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAACTCGTCGCACACGATaGCCAAGGCCACGAACACAT +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGTRRTR*PRPRTH
Trigger: ATGTGTTCGTGGCCTTGGCCATCGTGTGCGACGAGT...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCACCTCAGTGTCGTCTaGTTGGGTTTCACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNHLSVV*LGFTLP
Trigger: GGGCAAGGTGAAACCCAACCAGACGACACTGAGGTG...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGTTCCCCTCCACCATCTaGACCCTTCTCACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLFPSTI*TLLTLG
Trigger: ACCCAAGGTGAGAAGGGTGCAGATGGTGGAGGGGAA...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AAGTCCTCTGACTGCATGACAGCTGCTTGCCTGAGTGATAAAAACTCTCCCTTCGGGTACAGCTGGGGCTaGCTCCACAACCACACATCG +
Preference number: 4 (lower is better)
Translates to: KSSDCMTAACLSDKNSPFGYSWG*LHNHTS
Trigger: CGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCC...GAAGGGAGAGTTTTTATCACTCAGGCAAGCAGCTGTCATGCAGTCAGAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTCGCAGGGAGCTCGGCTaGCTCATCCTCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFRRELG*LILVWA
Trigger: AGCCCAGACGAGGATGAGCCAGCCGAGCTCCCTGCG...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTGTCTGGAGCAGGGGCTaGAGTGACCGTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFVWSRG*SDRDRR
Trigger: CCTGCGGTCACGGTCACTCCAGCCCCTGCTCCAGAC...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAACAGTGGGAACACGATaGGCAGGAGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGTVGTR*AGGRGR
Trigger: TCTACCTCTTCCTCCTGCCCATCGTGTTCCCACTGT...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGAGATGGTGTTGCGGATaGTACTGTTGTGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLRWCCG*YCCAAR
Trigger: CCTCGCTGCACAACAGTATCATCCGCAACACCATCT...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGACCTCCTGATCTCCCTTaGCGTCTGGAGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRPPDLP*RLEQGL
Trigger: CAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGG...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGCTTCAGAAATCCCAATaGTTTCGCCAACCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELLQKSQ*FRQPGE
Trigger: CTCACCAGGTTGGCGAAACCATTGGGATTTCTGAAG...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGTTGTGTGCTCATGGTTaGCTTGGGAGTTACGAGGGT +
Preference number: 4 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLLCAHG*LGSYEG
Trigger: ACCCTCGTAACTCCCAAGGCAACCATGAGCACACAA...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGGGTTGGGTTTCACCTTaGCCTTCATGCTTATCTTTG +
Preference number: 4 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELGWVSP*PSCLSL
Trigger: CAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACC...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGACTTGGGGTGGAGATTTaGCCAGCCGGGTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRLGVEI*PAGWQS
Trigger: GCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAG...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGACCATACCATGAGGTATaGGAACATGGCTATCCAGAT +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGPYHEV*EHGYPD
Trigger: ATCTGGATAGCCATGTTCTCATACCTCATGGTATGG...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATAAAGAAGGAACATCGTaGAGCCCAGGATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNKEGTS*SPGSCS
Trigger: TGAACAAGATCCTGGGCTTCACGATGTTCCTTCTTT...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACATGGCGTGAGTTGGGCTaGAGTTCTTCCTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTWRELG*SSSFLP
Trigger: GGGGAGAAAGGAAGAACTCCAGCCCAACTCACGCCA...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTTGTCACGCCTGGAGATaGGGTCATGGGTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFCHAWR*GHGYSW
Trigger: CCAGCTGTACCCATGACCCCATCTCCAGGCGTGACA...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 72 bp CCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTaGAAGTGGCCACTGATGGAGACAAACAAATGTGGA +
Preference number: 4 (lower is better)
Translates to: PRAAGQLCQNNP*KWPLMETNKCG
Trigger: TCCACATTTGTTTGTCTCCATCAGTGGCCACTTCAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACAAGAAGGCGACTCCAATaGAGCCTCTTTGGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTRRRLQ*SLFGRS
Trigger: ACTCCGACCAAAGAGGCTTCATTGGAGTCGCCTTCT...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACAGTCTGGGCTGCTTTCTaGTTTGGTCTGGGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTVWAAF*FGLGEN
Trigger: GTTCTCTCCCAGACCAAAGCAGAAAGCAGCCCAGAC...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACATTCCCTGGCGTGAGTTaGGCTGGAGTTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTFPGVS*AGVLPF
Trigger: GAAAGGAAGAACTCCAGCCCAACTCACGCCAGGGAA...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCTGTTCTCTCAAATCTaGTCTCTAACAGCCTATAGG +
Preference number: 4 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNLFSQI*SLTAYR
Trigger: CCTATAGGCTGTTAGAGACCAGATTTGAGAGAACAG...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp GTAAGAGGGACGGTAACTTCTGGCATAGTCCTCTCCTCTATGTCCATCTTGAGCGGATGCTACCCATCCTaGTGCTTACTGTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: VRGTVTSGIVLSSMSILSGCYPS*CLLSFA
Trigger: AGCAAATGACAGTAAGCACCAGGATGGGTAGCATCC...GCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCACACACTGAACAGGTCTaGGGGATACTCCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSHTEQV*GILRLG
Trigger: CCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGTG...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAATACCCACATTGCTGTaGGAGATAAAGACACCAATG +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGIPTLL*EIKTPM
Trigger: CATTGGTGTCTTTATCTCCCACAGCAATGTGGGTAT...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAATTGATCTTCAGCATTaGCTTCTGTTTCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGIDLQH*LLFHPH
Trigger: GTGAGGGTGAAACAGAAGCCAATGCTGAAGATCAAT...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 72 bp CGCTGCCCGGCTCACATTCCTGATCATGTTCATTATTaGATTGGTATGGTAAGAGGGACGGTAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RCPAHIPDHVHY*IGMVRGTVTSG
Trigger: GCCAGAAGTTACCGTCCCTCTTACCATACCAATCAAATAATGAACATGATCAGGAATGTGAGCCGGGCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp AAGTCCTCTGACTGCATGACAGCTGCTTGCCTGAGTGATAAAAACTCTCCCTTCCAGGCAAGCCCACTGTaGTGTCAAATATGTTACTGC +
Preference number: 4 (lower is better)
Translates to: KSSDCMTAACLSDKNSPFQASPL*CQICYC
Trigger: GCAGTAACATATTTGACATCACAGTGGGCTTGCCTG...GAAGGGAGAGTTTTTATCACTCAGGCAAGCAGCTGTCATGCAGTCAGAGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACATGGAGGGTCACTGCCTaGCACTGCCATTTCATTGTT +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTWRVTA*HCHFIV
Trigger: AACAATGAAATGGCAGTGGCAGGCAGTGACCCTCCA...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCACCTCTGGAGGGTCACTaGCTGCCACTGCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSPLEGH*LPLPFH
Trigger: ATGAAATGGCAGTGGCAGGCAGTGACCCTCCAGAGG...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTGATGAAGTGACTTGGTaGTCCACTAGGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFDEVTW*STRCGW
Trigger: CCACCCACACCTAGTGGAGCACCAAGTCACTTCATC...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCAGGCCTCCTGCTAAGCTaGTCTTTCACCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSGLLLS*SFTQSS
Trigger: TGAGCTCTGGGTGAAAGAGCAGCTTAGCAGGAGGCC...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp GTAAGAGGGACGGTAACTTCTGGCATAGTCCTCTCCTCTATGTCCATCTTGAGCGGTCAGGAATTGAAGTaGCTGCTGCTAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: VRGTVTSGIVLSSMSILSGQELK*LLLRLS
Trigger: TGACAATCTTAGCAGCAGGCACTTCAATTCCTGACC...GCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGATCCTTCCTTTTTCCCTaGCGTGAGTTGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRSFLFP*RELGWS
Trigger: ACTCCAGCCCAACTCACGCCAGGGAAAAAGGAAGGA...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTGATGACTCCCAAGGCTaGGACAAAGTACTCGTCGCA +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFDDSQG*DKVLVA
Trigger: TGCGACGAGTACTTTGTCCCAGCCTTGGGAGTCATC...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACATCAGTGTCGTCTGGTTaGGTTTCACCTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTSVSSG*VSPCPS
Trigger: TGAAGGGCAAGGTGAAACCCAACCAGACGACACTGA...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGAAGAACTCTGGCTTCCTaGTTCAAGCTCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRRTLAS*FKLSCL
Trigger: CAAGCAGGAGAGCTTGAATCAGGAAGCCAGAGTTCT...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGACTTCTAACATCACACTaGTTACCAAGAACACAAAGT +
Preference number: 4 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGLLTSH*LPRTQS
Trigger: ACTTTGTGTTCTTGGTAATCAGTGTGATGTTAGAAG...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCATCTGTCTCTCACAGTTaGTGTGGGGCTGATGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSSVSHS*CGADGV
Trigger: CACACCATCAGCCCCACAGCAACTGTGAGAGACAGA...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCAGGGGATACTCCGCCTTaGGGTGGAGATTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSGDTPP*GGDLAS
Trigger: GCTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCC...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACATCTGGGAGAGAACTCTaGCTTCCTGATTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTSGREL*LPDSSS
Trigger: AGAGCTTGAATCAGGAAGCCAGAGTTCTCTCCCAGA...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCACCAGGCTGTGGAGCATaGGGTGGTAGATGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSPGCGA*GGRWCC
Trigger: GCAACACCATCTACCACCTCATGCTCCACAGCCTGG...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTCCTGGATCGTCCTCCTaGTCTCCCTTGGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFPGSSS*SPLASG
Trigger: TCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGG...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TTTGAAGTGGCCACTGATGGAGACAAACAAATGTGGATTTTCCAGGAAGTGCATGAGCCCACCATACCATaGGGTATGAGAACATGGCTA +
Preference number: 4 (lower is better)
Translates to: FEVATDGDKQMWIFQEVHEPTIP*GMRTWL
Trigger: TAGCCATGTTCTCATACCTCATGGTATGGTGGGCTC...ATGCACTTCCTGGAAAATCCACATTTGTTTGTCTCCATCAGTGGCCACTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGATTCTTGCTGTCCTGTTaGTCGTTTTCCTCGACAGCA +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRFLLSC*SFSSTA
Trigger: TGCTGTCGAGGAAAACGAGCAACAGGACAGCAAGAA...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCATGGCCTGCTTCTGCCTaGTGTCAGGCCATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSWPASA*CQAIPE
Trigger: CTCTGGAATGGCCTGACAGCAGGCAGAAGCAGGCCA...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTTCAGAACCATTCTCTTaGGAGAAGCTGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFSEPFS*EKLLWF
Trigger: AAACCACAGCAGCTTCTCTCAAGAGAATGGTTCTGA...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGATCACAAACAGGAGCATaGGAAACAGCAAGACGATTG +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRSQTGA*ETARRL
Trigger: CAATCGTCTTGCTGTTTCTCATGCTCCTGTTTGTGA...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGATGCTGTGGTTTCTCCTaGTGTTCTCTCAAATCTGGT +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRCCGFS*CSLKSG
Trigger: ACCAGATTTGAGAGAACAGCAGGAGAAACCACAGCA...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTCGAACACATACATCATaGCGAAGATGTGTAGGACCA +
Preference number: 4 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFRTHTS*RRCVGP
Trigger: TGGTCCTACACATCTTCGGCATGATGTATGTGTTCG...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TTTGAAGTGGCCACTGATGGAGACAAACAAATGTGGATTTTCCAGGAAGTGCATACATCCTCGGAGATCTaGAGCTTGTGTGTGATGACT +
Preference number: 4 (lower is better)
Translates to: FEVATDGDKQMWIFQEVHTSSEI*SLCVMT
Trigger: AGTCATCACACACAAGCTGCAGATCTCCGAGGATGT...ATGCACTTCCTGGAAAATCCACATTTGTTTGTCTCCATCAGTGGCCACTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTACATCCTCGTCTGGGCTaGTTTCTGCTTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLHPRLG*FLLWSG
Trigger: CCCAGACCAAAGCAGAAAGCAGCCCAGACGAGGATG...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCAAACTTCCTGGACTCCTaGCTCCGTACATCAGGTATT +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSNFLDS*LRTSGI
Trigger: AATACCTGATGTACGGAGGCAGGAGTCCAGGAAGTT...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCAGTGCTTACTGTCATTTaGTCCTCAGAGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSVLTVI*SSEVAG
Trigger: CCCTGCCACCTCTGAGGAGCAAATGACAGTAAGCAC...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTCATGAATGTGGCCCCTaGCACATCCTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFHECGP*HILGDL
Trigger: CAGATCTCCGAGGATGTGGCAGGGGCCACATTCATG...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGACTTGTTCAACTTCTTTaGTTTCTGCCTCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LALQSSLGWHISIALSPRLVQLL*FLPQFP
Trigger: GGGAAACTGAGGCAGAAAGCAAAGAAGTTGAACAAG...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTTCATCCACATCTTCCTaGCAGCCTGGATCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFSSTSS*QPGSSS
Trigger: GGAGGACGATCCAGGCTGCCAGGAAGATGTGGATGA...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCATATTGTCAGCCACAGTaGGAACACGATGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSYCQPQ*EHDGQE
Trigger: CTCCTGCCCATCGTGTTCCCACTGTGGCTGACAATA...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTCTGTCTGCCTGGAGTTaGGATGAAGTGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFLSAWS*DEVTWC
Trigger: GCACCAAGTCACTTCATCTCAACTCCAGGCAGACAG...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCAACACAGGGCAGGATATaGTTCGATCTTCTAACATCA +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSTQGRI*FDLLTS
Trigger: TGATGTTAGAAGATCGAATCATATCCTGCCCTGTGT...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCACTTTCTGCTTTGGTCTaGGAGAGAACTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSLSALV*ERTLAS
Trigger: GGAAGCCAGAGTTCTCTCCCAGACCAAAGCAGAAAG...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTGGCTGCTTTCTGCTTTaGTCTGGGAGAGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFGCFLL*SGRELW
Trigger: CCAGAGTTCTCTCCCAGACCAAAGCAGAAAGCAGCC...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 72 bp TTTGAAGAAGTACAGCCCATCTTAAAAGATGAATACTaGAGTACCTCCACCCTCCATCACCAGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: FEEVQPILKDEY*STSTLHHQNEP
Trigger: TGGTTCATTCTGGTGATGGAGGGTGGAGGTACTCAAGTATTCATCTTTTAAGATGGGCTGTACTTCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTTCTCCCACCAGGCAATaGAACTGTCCAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFSPTRQ*NCPGRR
Trigger: TCTTCTTCCTGGACAGTTTCATTGCCTGGTGGGAGA...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR TCA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCATTTACACGATGCAATTaGGAAGATCACAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: SLLVSMTYIICIIICRRSFTRCN*EDHKQE
Trigger: CTCCTGTTTGTGATCTTCTCAATTGCATCGTGTAAA...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCAACCCAGAGCTCAATCTaGTTGTTCCACTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSTQSSI*LFHFMV
Trigger: CACCATGAAGTGGAACAAGCAGATTGAGCTCTGGGT...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCACTGTCATTTCTCCTCTaGGTTCAGCCTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSLSFLL*VQPHPH
Trigger: ATGTGGATGAGGCTGAACGCAGAGGAGAAATGACAG...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTAAGTTTAATAGGCTGCTaGGAGGAGACCTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLSLIGC*EETFVH
Trigger: GTGGACAAAGGTCTCCTCCCAGCAGCCTATTAAACT...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTTCTCTTGAGAGAAGCTaGTGTGGTTTCTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSFLPQILASNSSQITDFSLERS*CGFSCC
Trigger: ACAGCAGGAGAAACCACAGCAGCTTCTCTCAAGAGA...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCAAACTTCTTTGCTTTCTaGCTCAGTTTCCCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSNFFAF*LSFPFL
Trigger: CAAGAAGGGGAAACTGAGGCAGAAAGCAAAGAAGTT...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTACTTATCTTTGCCTTCTaGCTCAGTTTCCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLLIFAF*LSFPFL
Trigger: CAAGAAAGGGAAACTGAGGCAGAAGGCAAAGATAAG...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR GCA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCATGTCAAATATGTTACTaGCCACTGAGCTTGACACAG +
Preference number: 4 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSCQICY*PLSLTQ
Trigger: CTGTGTCAAGCTCAGTGGGCAGTAACATATTTGACA...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CCA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTATCCACTAGGTGTGGGTaGGATGTTTTCTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLSTRCG*DVFFLS
Trigger: AGACAAAAAGAAAACATCCCACCCACACCTAGTGGA...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 72 bp TTCAGAAATGCAACAATAAAAGCTATTATCTTCCTTTaGACACAGAAAGCATTGGCATGCGTTTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: FRNATIKAIIFL*TQKALACVFTG
Trigger: TCCTGTGAAAACGCATGCCAATGCTTTCTGTGTCAAAAGGAAGATAATAGCTTTTATTGTTGCATTTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
3UTR CAA 72 bp TACATAGCCCTAAGAGTAGTTTTCTTCCTCAAATCCTaGCCTCCAATTCAAGTCAAATTACAGACTTTCATT +
Preference number: 4 (lower is better)
Translates to: YIALRVVFFLKS*PPIQVKLQTFI
Trigger: AATGAAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACTCTTAGGGCTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GCCTGGATCGTCCTCCTGATCTCCCTTGGCGTCTGGAGCAGGGGCTaGAGTGACCGTGACCGCAGGGAGCTCGGCTGGCTCATCCTCGTC +
Preference number: 5 (lower is better)
Translates to: AWIVLLISLGVWSRG*SDRDRRELGWLILV
Trigger: GACGAGGATGAGCCAGCCGAGCTCCCTGCGGTCACGGTCACTCCAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp ATCTTCCTGGCAGCCTGGATCGTCCTCCTGATCTCCCTTGGCGTCTaGAGCAGGGGCTGGAGTGACCGTGACCGCAGGGAGCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: IFLAAWIVLLISLGV*SRGWSDRDRRELGW
Trigger: CCAGCCGAGCTCCCTGCGGTCACGGTCACTCCAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGGCTGCCAGGAAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GTCTGGGGGATACTCCGCCTTGGGGTGGAGATTTGGCCAGCCGGGTaGCAAAGCCGAGGGACCGGAACTGGGTGTCTCTGGGAACAGGAT +
Preference number: 5 (lower is better)
Translates to: VWGILRLGVEIWPAG*QSRGTGTGCLWEQD
Trigger: ATCCTGTTCCCAGAGACACCCAGTTCCGGTCCCTCGGCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp CACACTGAACAGGTCTGGGGGATACTCCGCCTTGGGGTGGAGATTTaGCCAGCCGGGTGGCAAAGCCGAGGGACCGGAACTGGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: HTEQVWGILRLGVEI*PAGWQSRGTGTGCL
Trigger: GAGACACCCAGTTCCGGTCCCTCGGCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp CGATCCTCCACACTGAACAGGTCTGGGGGATACTCCGCCTTGGGGTaGAGATTTGGCCAGCCGGGTGGCAAAGCCGAGGGACCGGAACTG +
Preference number: 5 (lower is better)
Translates to: RSSTLNRSGGYSALG*RFGQPGGKAEGPEL
Trigger: CAGTTCCGGTCCCTCGGCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGTGGAGGATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp CGTTCAGCCTCATCCACATCTTCCTGGCAGCCTGGATCGTCCTCCTaGTCTCCCTTGGCGTCTGGAGCAGGGGCTGGAGTGACCGTGACC +
Preference number: 5 (lower is better)
Translates to: RSASSTSSWQPGSSS*SPLASGAGAGVTVT
Trigger: GGTCACGGTCACTCCAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGGCTGCCAGGAAGATGTGGATGAGGCTGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp CGAAGATGTGTAGGACCACCCAGCCCTGTCGTCGATCCTCCACACTaGACAGGTCTGGGGGATACTCCGCCTTGGGGTGGAGATTTGGCC +
Preference number: 5 (lower is better)
Translates to: RRCVGPPSPVVDPPH*TGLGDTPPWGGDLA
Trigger: GGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGTGGAGGATCGACGACAGGGCTGGGTGGTCCTACACATCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GGGGTCATGGGTACAGCTGGGGCTGGCTCCACAACCACACATCGGTaGACTTGTGTGCTCATGGTTGCCTTGGGAGTTACGAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GVMGTAGAGSTTTHR*TCVLMVALGVTRVL
Trigger: CAGCACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCCATGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GGAACTGGGTGTCTCTGGGAACAGGATGCTTGTCACGCCTGGAGATaGGGTCATGGGTACAGCTGGGGCTGGCTCCACAACCACACATCG +
Preference number: 5 (lower is better)
Translates to: GTGCLWEQDACHAWR*GHGYSWGWLHNHTS
Trigger: CGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCCATGACCCCATCTCCAGGCGTGACAAGCATCCTGTTCCCAGAGACACCCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp TCTGGGCTGCTTTCTGCTTTGGTCTGGGAGAGAACTCTGGCTTCCTaGTTCAAGCTCTCCTGCTTGTCCTTGGAGGGGCGGGCTTCCCCC +
Preference number: 5 (lower is better)
Translates to: SGLLSALVWERTLAS*FKLSCLSLEGRASP
Trigger: GGGGGAAGCCCGCCCCTCCAAGGACAAGCAGGAGAGCTTGAATCAGGAAGCCAGAGTTCTCTCCCAGACCAAAGCAGAAAGCAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GATGCTTGTCACGCCTGGAGATGGGGTCATGGGTACAGCTGGGGCTaGCTCCACAACCACACATCGGTGGACTTGTGTGCTCATGGTTGC +
Preference number: 5 (lower is better)
Translates to: DACHAWRWGHGYSWG*LHNHTSVDLCAHGC
Trigger: GCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCCATGACCCCATCTCCAGGCGTGACAAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 90 bp CATCCCATCCTCCACTTCAGAGCTAGCCTCTGGAGGGTCACTGCCTaGCACTGCCATTTCATTGTTGGGGAGGTCCCTGACGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: HPILHFRASLWRVTA*HCHFIVGEVPDGQF
Trigger: AAACTGGCCGTCAGGGACCTCCCCAACAATGAAATGGCAGTGGCAGGCAGTGACCCTCCAGAGGCTAGCTCTGAAGTGGAGGATGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 90 bp CCGAGCTACTCCCTCGGGTCAGCACAGACGGGAGCTTCAGTTTCTTaGTGTCCTGTTGCTCGTTTTCCTCGACAGCATCCTCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: PSYSLGSAQTGASVS*CPVARFPRQHPHWA
Trigger: AGCCCAGTGAGGATGCTGTCGAGGAAAACGAGCAACAGGACAGCAAGAAACTGAAGCTCCCGTCTGTGCTGACCCGAGGGAGTAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp TCTCACAGTTGCTGTGGGGCTGATGGTGTGAGCACCTGCTGGAGATaGGGTATGCGTCCTTCCTTTTTCCCTGGCGTGAGTTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SHSCCGADGVSTCWR*GMRPSFFPGVSWAG
Trigger: TCCAGCCCAACTCACGCCAGGGAAAAAGGAAGGACGCATACCCCATCTCCAGCAGGTGCTCACACCATCAGCCCCACAGCAACTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GAACAGGATGCTTGTCACGCCTGGAGATGGGGTCATGGGTACAGCTaGGGCTGGCTCCACAACCACACATCGGTGGACTTGTGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: EQDACHAWRWGHGYS*GWLHNHTSVDLCAH
Trigger: ATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCCATGACCCCATCTCCAGGCGTGACAAGCATCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp TTGTCAGCCACAGTGGGAACACGATGGGCAGGAGGAAGAGGTAGATaGCCTGCTTCTGCCTGCTGTCAGGCCATTCCAGAGACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: LSATVGTRWAGGRGR*PASACCQAIPETEA
Trigger: AGCCTCTGTCTCTGGAATGGCCTGACAGCAGGCAGAAGCAGGCCATCTACCTCTTCCTCCTGCCCATCGTGTTCCCACTGTGGCTGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp CCTGCCTCCGTACATCAGGTATTGTCAGCCACAGTGGGAACACGATaGGCAGGAGGAAGAGGTAGATGGCCTGCTTCTGCCTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: PASVHQVLSATVGTR*AGGRGRWPASACCQ
Trigger: CTGACAGCAGGCAGAAGCAGGCCATCTACCTCTTCCTCCTGCCCATCGTGTTCCCACTGTGGCTGACAATACCTGATGTACGGAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGGCCACCAGGTGAGGTaGAGGATCTCCCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGGHQVR*RISREK
Trigger: CTTCTCCCGGGAGATCCTCAACCTCACCTGGTGGCC...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 90 bp GGCTGGCTCCACAACCACACATCGGTGGACTTGTGTGCTCATGGTTaGCTTGGGAGTTACGAGGGTGCTGGGTGCTGTAGAAGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: GWLHNHTSVDLCAHG*LGSYEGAGCCRRSL
Trigger: AAGAGACCTTCTACAGCACCCAGCACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 90 bp CCTCGGGTCAGCACAGACGGGAGCTTCAGTTTCTTGCTGTCCTGTTaGTCGTTTTCCTCGACAGCATCCTCACTGGGCTTGCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PRVSTDGSFSFLLSC*SFSSTASSLGLLRS
Trigger: AGACCTCAGCAAGCCCAGTGAGGATGCTGTCGAGGAAAACGAGCAACAGGACAGCAAGAAACTGAAGCTCCCGTCTGTGCTGACCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 90 bp GGAACACGATGGGCAGGAGGAAGAGGTAGATGGCCTGCTTCTGCCTaGTGTCAGGCCATTCCAGAGACAGAGGCTCCTCATTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GTRWAGGRGRWPASA*CQAIPETEAPHFPP
Trigger: AGGAGGAAAATGAGGAGCCTCTGTCTCTGGAATGGCCTGACAGCAGGCAGAAGCAGGCCATCTACCTCTTCCTCCTGCCCATCGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp CTTCCTGGACTCCTGCCTCCGTACATCAGGTATTGTCAGCCACAGTaGGAACACGATGGGCAGGAGGAAGAGGTAGATGGCCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPGLLPPYIRYCQPQ*EHDGQEEEVDGLLL
Trigger: CAGAAGCAGGCCATCTACCTCTTCCTCCTGCCCATCGTGTTCCCACTGTGGCTGACAATACCTGATGTACGGAGGCAGGAGTCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACACTCTCCTGCTTGTCCTaGGAGGGGCGGGCTTCCCCC +
Preference number: 5 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTLSCLS*EGRASP
Trigger: GGGGGAAGCCCGCCCCTCCAAGGACAAGCAGGAGAG...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp GCTGCTCTTTCACCCAGAGCTCAATCTGCTTGTTCCACTTCATGGTaGACACATAGAGAGCGTAGGCCAACAGCAGCAGCAGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: AALSPRAQSACSTSW*THRERRPTAAAGSP
Trigger: GGGAGAGCCTGCTGCTGCTGTTGGCCTACGCTCTCTATGTGTTCACCATGAAGTGGAACAAGCAGATTGAGCTCTGGGTGAAAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGGATGCTGGAGGGATCTaGGTTGTTCTGGGTGGATTG +
Preference number: 5 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELDAGGI*VVLGGL
Trigger: CAATCCACCCAGAACAACCAAGATCCCTCCAGCATC...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TGTTCAGGAGAACAAGCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGACTCAGTGTCGTCTGGTaGGGTTTCACCTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: CSGEQAFDPCMLHHGSSGLSVVW*GFTLPF
Trigger: GAAGGGCAAGGTGAAACCCAACCAGACGACACTGAG...TCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGCTTGTTCTCCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp TATAGGTTGCCATGGTTTCTCTGTCTCTCACAGTTGCTGTGGGGCTaGTGGTGTGAGCACCTGCTGGAGATGGGGTATGCGTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: YRLPWFLCLSQLLWG*WCEHLLEMGYASFL
Trigger: AAGGAAGGACGCATACCCCATCTCCAGCAGGTGCTCACACCATCAGCCCCACAGCAACTGTGAGAGACAGAGAAACCATGGCAACCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATTTTCCCTGGCGTGAGTaGGGCTGGAGTTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNFPWRE*GWSSSF
Trigger: AAAGGAAGAACTCCAGCCCAACTCACGCCAGGGAAA...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp CCCAATGGTTTCGCCAACCTGGTGAGCCCACCATACCATGAGGTATaGGAACATGGCTATCCAGATGATGGATCCCAGGAAGGTGATGAC +
Preference number: 5 (lower is better)
Translates to: PNGFANLVSPPYHEV*EHGYPDDGSQEGDD
Trigger: GTCATCACCTTCCTGGGATCCATCATCTGGATAGCCATGTTCTCATACCTCATGGTATGGTGGGCTCACCAGGTTGGCGAAACCATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp TCCATTGCTATGCTAGGTGCTGCTTCATCCATGATCACTGTGTCTTaGGCTGCTAGCATCCCATCCTCCACTTCAGAGCTAGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SIAMLGAASSMITVS*AASIPSSTSELASG
Trigger: TCCAGAGGCTAGCTCTGAAGTGGAGGATGGGATGCTAGCAGCCCAAGACACAGTGATCATGGATGAAGCAGCACCTAGCATAGCAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp CTGCACCCTTCTCACCTTGGGTGGCCTCACATTGATCTTCAGCATTaGCTTCTGTTTCACCCTCACCATCTTTCACCTCAGTGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: LHPSHLGWPHIDLQH*LLFHPHHLSPQCRL
Trigger: CAGACGACACTGAGGTGAAAGATGGTGAGGGTGAAACAGAAGCCAATGCTGAAGATCAATGTGAGGCCACCCAAGGTGAGAAGGGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATGTTCTGGACAAGGGATaGTTAATTCTCCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNVLDKG*LILRAA
Trigger: TGCTGCCCGGAGAATTAACAATCCCTTGTCCAGAAC...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AAAACTCTCCCTTCCAAGGTAACGTTCTTAATCCACCTGAAGCTGCAGGTGTTTGGGGGATACTCCGCCTaGGGGTGGAGATTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: KTLPSKVTFLIHLKLQVFGGYSA*GWRFGQ
Trigger: CTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCC...AAACACCTGCAGCTTCAGGTGGATTAAGAACGTTACCTTGGAAGGGAGAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGTCGGAGATCTGCAGCTaGTGTGTGATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLSEICS*CVMTPK
Trigger: CTTGGGAGTCATCACACACAAGCTGCAGATCTCCGA...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCAGCATCCTCACTGGGCTaGCTGAGGTCTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLLVSMTYIICIIICRRSASSLG*LRSPRA
Trigger: GGCCCTGGGAGACCTCAGCAAGCCCAGTGAGGATGC...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGGTACCAATACCCACATaGCTGTGGGAGATAAAGACA +
Preference number: 5 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELVPIPT*LWEIKT
Trigger: TGTCTTTATCTCCCACAGCAATGTGGGTATTGGTAC...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CACTCCTGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCAGAGCTCAATCTGCTaGTTCCACTTCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: HSWARKCPRAAGQLCQNNQSSIC*FHFMVN
Trigger: GTTCACCATGAAGTGGAACAAGCAGATTGAGCTCTG...ATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCAGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp GCCTTTGACCCCTGCATGCTGCACCATGGCTCTTCAGGAGTGACAAGGGAATTGTGGTTGGGTTTCACCTaGCCCTTCATGCTTATCTTT +
Preference number: 5 (lower is better)
Translates to: AFDPCMLHHGSSGVTRELWLGFT*PFMLIF
Trigger: AAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCA...CAATTCCCTTGTCACTCCTGAAGAGCCATGGTGCAGCATGCAGGGGTCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp GCTTCTGTTTCACCCTCACCATCTTTCACCTCAGTGTCGTCTGGTTaGGTTTCACCTTGCCCTTCATGCTTATCTTTGCCTTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: ASVSPSPSFTSVSSG*VSPCPSCLSLPSAS
Trigger: TGAGGCAGAAGGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGATGGTGAGGGTGAAACAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TGGGCAAGAAAATGCCCAAGGGCAGCAGGGCAGCTGTGTCAGAATAATCCTTTGCTAACAGCCTATAGGTaGCCATGGTTTCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: WARKCPRAAGQLCQNNPLLTAYR*PWFLCL
Trigger: GAGACAGAGAAACCATGGCAACCTATAGGCTGTTAG...CAAAGGATTATTCTGACACAGCTGCCCTGCTGCCCTTGGGCATTTTCTTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp GTAAGAGGGACGGTAACTTCTGGCATAGTCCTCTCCTCTATGTCCATCTTGAGCTCCGTACATCAGGTATaGTCAGCCACAGTGGGAACA +
Preference number: 5 (lower is better)
Translates to: VRGTVTSGIVLSSMSILSSVHQV*SATVGT
Trigger: TGTTCCCACTGTGGCTGACAATACCTGATGTACGGA...GCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 90 bp ATTGGCTTCTGTTTCACCCTCACCATCTTTCACCTCAGTGTCGTCTaGTTGGGTTTCACCTTGCCCTTCATGCTTATCTTTGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: IGFCFTLTIFHLSVV*LGFTLPFMLIFAFC
Trigger: GCAGAAGGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGATGGTGAGGGTGAAACAGAAGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACAGAAACAGCAAGACGATaGCACAGAACAGGCCGTTGC +
Preference number: 5 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTETARR*HRTGRC
Trigger: GCAACGGCCTGTTCTGTGCAATCGTCTTGCTGTTTC...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CTTGCTTTACAGTCTAGTCTAGGTTGGCATATAAGCATAGCACTGAGCCCTAGATCCAATGAAGCCTCTTaGGTCGGAGTAACCGCCTCT +
Preference number: 5 (lower is better)
Translates to: LALQSSLGWHISIALSPRSNEAS*VGVTAS
Trigger: AGAGGCGGTTACTCCGACCAAAGAGGCTTCATTGGA...TCTAGGGCTCAGTGCTATGCTTATATGCCAACCTAGACTAGACTGTAAAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCACCTTGGGGTGGAGATTaGGCCAGCCGGGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSPWGGD*ASRVAK
Trigger: CTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGG...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp GTAAGAGGGACGGTAACTTCTGGCATAGTCCTCTCCTCTATGTCCATCTTGAGCTCTTGTTCAACTTCTTaGCTTTCTGCCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VRGTVTSGIVLSSMSILSSCSTS*LSASVS
Trigger: GGAAACTGAGGCAGAAAGCAAAGAAGTTGAACAAGA...GCTCAAGATGGACATAGAGGAGAGGACTATGCCAGAAGTTACCGTCCCTCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACACCTTCATGCTTATCTTaGCCTTCTGCCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTPSCLS*PSASVS
Trigger: GGAAACTGAGGCAGAAGGCAAAGATAAGCATGAAGG...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 90 bp CTACTTCATGTGTTAAGAAGGTCGGTGTGTTCAGAACCATTCTCTTaGGAGAAGCTGCTGTGGTTTCTCCTGCTGTTCTCTCAAATCTGG +
Preference number: 5 (lower is better)
Translates to: LLHVLRRSVCSEPFS*EKLLWFLLLFSQIW
Trigger: CCAGATTTGAGAGAACAGCAGGAGAAACCACAGCAGCTTCTCTCAAGAGAATGGTTCTGAACACACCGACCTTCTTAACACATGAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCAACTGCCATTTCATTGTaGGGGAGGTCCCTGACGGCC +
Preference number: 5 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSTAISL*GRSLTA
Trigger: GGCCGTCAGGGACCTCCCCAACAATGAAATGGCAGT...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCATTGGGTGGCCTCACATaGATCTTCAGCATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SLLVSMTYIICIIICRRSLGGLT*IFSIGF
Trigger: GAAGCCAATGCTGAAGATCAATGTGAGGCCACCCAA...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTAACAGGCTGCAGCGCATaGATGAGGGAGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLTGCSA*MREKRS
Trigger: GCTCCTCTTCTCCCTCATCAATGCGCTGCAGCCTGT...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTGTGCTCATGGTTGCCTaGGGAGTTACGAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SSFLPQILASNSSQITDFVLMVA*GVTRVL
Trigger: CAGCACCCTCGTAACTCCCAAGGCAACCATGAGCAC...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTACTTGTGTGCTCATGGTaGCCTTGGGAGTTACGAGGG +
Preference number: 5 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLLVCSW*PWELRG
Trigger: CCCTCGTAACTCCCAAGGCAACCATGAGCACACAAG...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AAGTCCTCTGACTGCATGACAGCTGCTTGCCTGAGTGATAAAAACTCTCCCTTCCTCAGTTTCCCTTTCTaGTTCAACTTCTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: KSSDCMTAACLSDKNSPFLSFPF*FNFFAF
Trigger: GAAAGCAAAGAAGTTGAACAAGAAAGGGAAACTGAG...GAAGGGAGAGTTTTTATCACTCAGGCAAGCAGCTGTCATGCAGTCAGAGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTGTTGTTCTGGGTGGATaGGGGGTGTCCTCCATTGCT +
Preference number: 5 (lower is better)
Translates to: SSFLPQILASNSSQITDFVVLGG*GVSSIA
Trigger: AGCAATGGAGGACACCCCCAATCCACCCAGAACAAC...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TCACTCCTGGTGTCTATGACATACATCATTTGCATCATAATCTGCAGACGCTCATTCAGAACCATTCTCTaGAGAGAAGCTGCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SLLVSMTYIICIIICRRSFRTIL*REAAVV
Trigger: AACCACAGCAGCTTCTCTCAAGAGAATGGTTCTGAA...TGAGCGTCTGCAGATTATGATGCAAATGATGTATGTCATAGACACCAGGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp ATCCTTTGTGCCCTTAAAAATACATACTCAACCAGATGTAGTGGCCATCTTTTACACACATCGGTGGACTaGTGTGCTCATGGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: ILCALKNTYSTRCSGHLLHTSVD*CAHGCL
Trigger: AAGGCAACCATGAGCACACAAGTCCACCGATGTGTG...TAAAAGATGGCCACTACATCTGGTTGAGTATGTATTTTTAAGGGCACAAAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTGGTCTCTTTTCCCTGTaGGTGGCCGAGGCAATTCTA +
Preference number: 5 (lower is better)
Translates to: SSFLPQILASNSSQITDFGLFSL*VAEAIL
Trigger: TAGAATTGCCTCGGCCACCAACAGGGAAAAGAGACC...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp CCCCTGCCTCCAAGCCTTCCCTTCTTAAACTCATTAACTGAACTCACAATGACAATTTACACGATGCAATaGAGAAGATCACAAACAGGA +
Preference number: 5 (lower is better)
Translates to: PLPPSLPFLNSLTELTMTIYTMQ*RRSQTG
Trigger: TCCTGTTTGTGATCTTCTCAATTGCATCGTGTAAAT...TGTCATTGTGAGTTCAGTTAATGAGTTTAAGAAGGGAAGGCTTGGAGGCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp TCCTTGTGCTCTGAAACCAAAGACGTGAAAGTTTTATTTCTAACATTCTCCTCATGGGATGTTTTCTTTTaGTCTTCTTGTGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SLCSETKDVKVLFLTFSSWDVFF*SSCASC
Trigger: ACAGCTGGCACAAGAAGACAAAAAGAAAACATCCCA...TGAGGAGAATGTTAGAAATAAAACTTTCACGTCTTTGGTTTCAGAGCACAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTTTTCTCCCCTGGGTTTaGGGATATAGCTTTTTACCC +
Preference number: 5 (lower is better)
Translates to: SSFLPQILASNSSQITDFFLPWV*GYSFLP
Trigger: GGGTAAAAAGCTATATCCCAAAACCCAGGGGAGAAA...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS-3UTR CAA 90 bp AGTAGTTTTCTTCCTCAAATCCTTGCCTCCAATTCAAGTCAAATTACAGACTTTTCTTGTTCATCTTTTTaGCCTTCTGCCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: SSFLPQILASNSSQITDFSCSSF*PSASVS
Trigger: GGAAACAGAGGCAGAAGGCAAAAAAGATGAACAAGA...AAAGTCTGTAATTTGACTTGAATTGGAGGCAAGGATTTGAGGAAGAAAACTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp GTCCTCCTGATCTCCCTTGGCGTCTGGAGCAGGGGCTaGAGTGACCGTGACCGCAGGGAGCTCGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: VLLISLGVWSRG*SDRDRRELGWL
Trigger: GAGCCAGCCGAGCTCCCTGCGGTCACGGTCACTCCAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp GCAGCCTGGATCGTCCTCCTGATCTCCCTTGGCGTCTaGAGCAGGGGCTGGAGTGACCGTGACCGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: AAWIVLLISLGV*SRGWSDRDRRE
Trigger: CTCCCTGCGGTCACGGTCACTCCAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp ACAGGTCTGGGGGATACTCCGCCTTGGGGTGGAGATTaGGCCAGCCGGGTGGCAAAGCCGAGGGACCGGAAC +
Preference number: 6 (lower is better)
Translates to: TGLGDTPPWGGD*ASRVAKPRDRN
Trigger: GTTCCGGTCCCTCGGCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGACCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp ATACTCCGCCTTGGGGTGGAGATTTGGCCAGCCGGGTaGCAAAGCCGAGGGACCGGAACTGGGTGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: ILRLGVEIWPAG*QSRGTGTGCLW
Trigger: CCAGAGACACCCAGTTCCGGTCCCTCGGCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGGCGGAGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp AGGGGCTGGAGTGACCGTGACCGCAGGGAGCTCGGCTaGCTCATCCTCGTCTGGGCTGCTTTCTGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: RGWSDRDRRELG*LILVWAAFCFG
Trigger: ACCAAAGCAGAAAGCAGCCCAGACGAGGATGAGCCAGCCGAGCTCCCTGCGGTCACGGTCACTCCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp AAGGAGACGTCTCGGAACAGGGGCCACCAGGTGAGGTaGAGGATCTCCCGGGAGAAGAGGGCACAGGTGCCG +
Preference number: 6 (lower is better)
Translates to: KETSRNRGHQVR*RISREKRAQVP
Trigger: CGGCACCTGTGCCCTCTTCTCCCGGGAGATCCTCAACCTCACCTGGTGGCCCCTGTTCCGAGACGTCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp GTAGGACCACCCAGCCCTGTCGTCGATCCTCCACACTaGACAGGTCTGGGGGATACTCCGCCTTGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: VGPPSPVVDPPH*TGLGDTPPWGG
Trigger: TCCACCCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGTGGAGGATCGACGACAGGGCTGGGTGGTCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp ACACTGAACAGGTCTGGGGGATACTCCGCCTTGGGGTaGAGATTTGGCCAGCCGGGTGGCAAAGCCGAGGGA +
Preference number: 6 (lower is better)
Translates to: TLNRSGGYSALG*RFGQPGGKAEG
Trigger: TCCCTCGGCTTTGCCACCCGGCTGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp TCATCCACATCTTCCTGGCAGCCTGGATCGTCCTCCTaGTCTCCCTTGGCGTCTGGAGCAGGGGCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: SSTSSWQPGSSS*SPLASGAGAGV
Trigger: CACTCCAGCCCCTGCTCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGGCTGCCAGGAAGATGTGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp CCGAGGGACCGGAACTGGGTGTCTCTGGGAACAGGATaGTTGTCACGCCTGGAGATGGGGTCATGGGTACAG +
Preference number: 6 (lower is better)
Translates to: PRDRNWVSLGTG*LSRLEMGSWVQ
Trigger: CTGTACCCATGACCCCATCTCCAGGCGTGACAAGCATCCTGTTCCCAGAGACACCCAGTTCCGGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp GCTTGTCACGCCTGGAGATGGGGTCATGGGTACAGCTaGGGCTGGCTCCACAACCACACATCGGTGGACTTG +
Preference number: 6 (lower is better)
Translates to: ACHAWRWGHGYS*GWLHNHTSVDL
Trigger: CAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCCATGACCCCATCTCCAGGCGTGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp ACTGGGTGTCTCTGGGAACAGGATGCTTGTCACGCCTaGAGATGGGGTCATGGGTACAGCTGGGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: TGCLWEQDACHA*RWGHGYSWGWL
Trigger: GAGCCAGCCCCAGCTGTACCCATGACCCCATCTCCAGGCGTGACAAGCATCCTGTTCCCAGAGACACCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp CCAGCCCTGTCGTCGATCCTCCACACTGAACAGGTCTaGGGGATACTCCGCCTTGGGGTGGAGATTTGGCCA +
Preference number: 6 (lower is better)
Translates to: PALSSILHTEQV*GILRLGVEIWP
Trigger: TGGCCAAATCTCCACCCCAAGGCGGAGTATCCCCCAGACCTGTTCAGTGTGGAGGATCGACGACAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 90 bp CATGGGTACAGCTGGGGCTGGCTCCACAACCACACATCGGTGGACTaGTGTGCTCATGGTTGCCTTGGGAGTTACGAGGGTGCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: HGYSWGWLHNHTSVD*CAHGCLGSYEGAGC
Trigger: GCACCCAGCACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCCCAGCTGTACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp GGGCTGGCTCCACAACCACACATCGGTGGACTTGTGTaGTCATGGTTGCCTTGGGAGTTACGAGGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GLAPQPHIGGLV*SWLPWELRGCW
Trigger: CCAGCACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp TGTCTCTGGGAACAGGATGCTTGTCACGCCTGGAGATaGGGTCATGGGTACAGCTGGGGCTGGCTCCACAAC +
Preference number: 6 (lower is better)
Translates to: CLWEQDACHAWR*GHGYSWGWLHN
Trigger: GTTGTGGAGCCAGCCCCAGCTGTACCCATGACCCCATCTCCAGGCGTGACAAGCATCCTGTTCCCAGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp TCTGCGTTCAGCCTCATCCACATCTTCCTGGCAGCCTaGATCGTCCTCCTGATCTCCCTTGGCGTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SAFSLIHIFLAA*IVLLISLGVWS
Trigger: GCTCCAGACGCCAAGGGAGATCAGGAGGACGATCCAGGCTGCCAGGAAGATGTGGATGAGGCTGAACGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp AGGCCGTTGCTGCTGACAGGAACAGGCTGCAGCGCATaGATGAGGGAGAAGAGGAGCCACGGAACAGGCAAG +
Preference number: 6 (lower is better)
Translates to: RPLLLTGTGCSA*MREKRSHGTGK
Trigger: CTTGCCTGTTCCGTGGCTCCTCTTCTCCCTCATCAATGCGCTGCAGCCTGTTCCTGTCAGCAGCAACGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 90 bp GCCGAGCTACTCCCTCGGGTCAGCACAGACGGGAGCTTCAGTTTCTaGCTGTCCTGTTGCTCGTTTTCCTCGACAGCATCCTCACTGGGC +
Preference number: 6 (lower is better)
Translates to: AELLPRVSTDGSFSF*LSCCSFSSTASSLG
Trigger: GCCCAGTGAGGATGCTGTCGAGGAAAACGAGCAACAGGACAGCAAGAAACTGAAGCTCCCGTCTGTGCTGACCCGAGGGAGTAGCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp CTCCACTTCAGAGCTAGCCTCTGGAGGGTCACTGCCTaGCACTGCCATTTCATTGTTGGGGAGGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: LHFRASLWRVTA*HCHFIVGEVPD
Trigger: GTCAGGGACCTCCCCAACAATGAAATGGCAGTGGCAGGCAGTGACCCTCCAGAGGCTAGCTCTGAAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp AGCCTTCGATGGTGGCTGGGATGCTACCCATCCTGGTaGTTACTGTCATTTGCTCCTCAGAGGTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SLRWWLGCYPSW*LLSFAPQRWQG
Trigger: CCCCTGCCACCTCTGAGGAGCAAATGACAGTAAGCACCAGGATGGGTAGCATCCCAGCCACCATCGAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp TGTCATTTGCTCCTCAGAGGTGGCAGGGGTGTGCTGTaGGACCGCTCCCTGGGGAGTGGTAGAGATGTTTCT +
Preference number: 6 (lower is better)
Translates to: CHLLLRGGRGVL*DRSLGSGRDVS
Trigger: AGAAACATCTCTACCACTCCCCAGGGAGCGGTCCCACAGCACACCCCTGCCACCTCTGAGGAGCAAATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp GCTCCACAACCACACATCGGTGGACTTGTGTGCTCATaGTTGCCTTGGGAGTTACGAGGGTGCTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: APQPHIGGLVCS*LPWELRGCWVL
Trigger: CAGCACCCAGCACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp AGCTGGGGCTGGCTCCACAACCACACATCGGTGGACTaGTGTGCTCATGGTTGCCTTGGGAGTTACGAGGGT +
Preference number: 6 (lower is better)
Translates to: SWGWLHNHTSVD*CAHGCLGSYEG
Trigger: ACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTGGAGCCAGCCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp CCATGGTTTCTCTGTCTCTCACAGTTGCTGTGGGGCTaGTGGTGTGAGCACCTGCTGGAGATGGGGTATGCG +
Preference number: 6 (lower is better)
Translates to: PWFLCLSQLLWG*WCEHLLEMGYA
Trigger: CGCATACCCCATCTCCAGCAGGTGCTCACACCATCAGCCCCACAGCAACTGTGAGAGACAGAGAAACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp CTGCTGGAGATGGGGTATGCGTCCTTCCTTTTTCCCTaGCGTGAGTTGGGCTGGAGTTCTTCCTTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: LLEMGYASFLFP*RELGWSSSFLP
Trigger: GGGGAGAAAGGAAGAACTCCAGCCCAACTCACGCCAGGGAAAAAGGAAGGACGCATACCCCATCTCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp CTCCTGCCTCCGTACATCAGGTATTGTCAGCCACAGTaGGAACACGATGGGCAGGAGGAAGAGGTAGATGGC +
Preference number: 6 (lower is better)
Translates to: LLPPYIRYCQPQ*EHDGQEEEVDG
Trigger: GCCATCTACCTCTTCCTCCTGCCCATCGTGTTCCCACTGTGGCTGACAATACCTGATGTACGGAGGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp CTTTCTGCTTTGGTCTGGGAGAGAACTCTGGCTTCCTaGTTCAAGCTCTCCTGCTTGTCCTTGGAGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LSALVWERTLAS*FKLSCLSLEGR
Trigger: CCGCCCCTCCAAGGACAAGCAGGAGAGCTTGAATCAGGAAGCCAGAGTTCTCTCCCAGACCAAAGCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp GGGTGGATTGGGGGTGTCCTCCATTGCTATGCTAGGTaGTGCTTCATCCATGATCACTGTGTCTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GWIGGVLHCYAR*CFIHDHCVLGC
Trigger: GCAGCCCAAGACACAGTGATCATGGATGAAGCAGCACCTAGCATAGCAATGGAGGACACCCCCAATCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp CACAACCACACATCGGTGGACTTGTGTGCTCATGGTTaGCTTGGGAGTTACGAGGGTGCTGGGTGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: HNHTSVDLCAHG*LGSYEGAGCCR
Trigger: TCTACAGCACCCAGCACCCTCGTAACTCCCAAGGCAACCATGAGCACACAAGTCCACCGATGTGTGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp AGGGCCATGACTTTGGCTACGGGCCTCCTGCTAAGCTaGTCTTTCACCCAGAGCTCAATCTGCTTGTTCCAC +
Preference number: 6 (lower is better)
Translates to: RAMTLATGLLLS*SFTQSSICLFH
Trigger: GTGGAACAAGCAGATTGAGCTCTGGGTGAAAGAGCAGCTTAGCAGGAGGCCCGTAGCCAAAGTCATGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp TCCCTCGGGTCAGCACAGACGGGAGCTTCAGTTTCTTaGTGTCCTGTTGCTCGTTTTCCTCGACAGCATCCT +
Preference number: 6 (lower is better)
Translates to: SLGSAQTGASVS*CPVARFPRQHP
Trigger: AGGATGCTGTCGAGGAAAACGAGCAACAGGACAGCAAGAAACTGAAGCTCCCGTCTGTGCTGACCCGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp CTCCCAAGGCTGGGACAAAGTACTCGTCGCACACGATaGCCAAGGCCACGAACACATACATCATGCCGAAGA +
Preference number: 6 (lower is better)
Translates to: LPRLGQSTRRTR*PRPRTHTSCRR
Trigger: TCTTCGGCATGATGTATGTGTTCGTGGCCTTGGCCATCGTGTGCGACGAGTACTTTGTCCCAGCCTTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp GTACATCAGGTATTGTCAGCCACAGTGGGAACACGATaGGCAGGAGGAAGAGGTAGATGGCCTGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: VHQVLSATVGTR*AGGRGRWPASA
Trigger: GGCAGAAGCAGGCCATCTACCTCTTCCTCCTGCCCATCGTGTTCCCACTGTGGCTGACAATACCTGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp CCAAGAGGAAAAGAAGGCGACTCCAATGAAGCCTCTTaGGTCGGAGTAACCGCCTCTCCTGTGTCCCCATCC +
Preference number: 6 (lower is better)
Translates to: PRGKEGDSNEAS*VGVTASPVSPS
Trigger: GGATGGGGACACAGGAGAGGCGGTTACTCCGACCAAAGAGGCTTCATTGGAGTCGCCTTCTTTTCCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp AATGTGGCCCCTGCCACATCCTCGGAGATCTGCAGCTaGTGTGTGATGACTCCCAAGGCTGGGACAAAGTAC +
Preference number: 6 (lower is better)
Translates to: NVAPATSSEICS*CVMTPKAGTKY
Trigger: GTACTTTGTCCCAGCCTTGGGAGTCATCACACACAAGCTGCAGATCTCCGAGGATGTGGCAGGGGCCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp AGCACAGACGGGAGCTTCAGTTTCTTGCTGTCCTGTTaGTCGTTTTCCTCGACAGCATCCTCACTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: STDGSFSFLLSC*SFSSTASSLGL
Trigger: CAAGCCCAGTGAGGATGCTGTCGAGGAAAACGAGCAACAGGACAGCAAGAAACTGAAGCTCCCGTCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp AATTCTCCGGGCAGCAGTAGAGCCTTCGATGGTGGCTaGGATGCTACCCATCCTGGTGCTTACTGTCATTTG +
Preference number: 6 (lower is better)
Translates to: NSPGSSRAFDGG*DATHPGAYCHL
Trigger: CAAATGACAGTAAGCACCAGGATGGGTAGCATCCCAGCCACCATCGAAGGCTCTACTGCTGCCCGGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp CTGGGCTGCTTTCTGCTTTGGTCTGGGAGAGAACTCTaGCTTCCTGATTCAAGCTCTCCTGCTTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: LGCFLLWSGREL*LPDSSSPACPW
Trigger: CCAAGGACAAGCAGGAGAGCTTGAATCAGGAAGCCAGAGTTCTCTCCCAGACCAAAGCAGAAAGCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp CCATCTGCACCCTTCTCACCTTGGGTGGCCTCACATTaGTCTTCAGCATTGGCTTCTGTTTCACCCTCACCA +
Preference number: 6 (lower is better)
Translates to: PSAPFSPWVASH*SSALASVSPSP
Trigger: TGGTGAGGGTGAAACAGAAGCCAATGCTGAAGATCAATGTGAGGCCACCCAAGGTGAGAAGGGTGCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp GGGAGAAGAGGAGCCACGGAACAGGCAAGCCCACTGTaGTGTCAAATATGTTACTGCCCACTGAGCTTGACA +
Preference number: 6 (lower is better)
Translates to: GRRGATEQASPL*CQICYCPLSLT
Trigger: TGTCAAGCTCAGTGGGCAGTAACATATTTGACATCACAGTGGGCTTGCCTGTTCCGTGGCTCCTCTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp ACCATCTGCACCCTTCTCACCTTGGGTGGCCTCACATaGATCTTCAGCATTGGCTTCTGTTTCACCCTCACC +
Preference number: 6 (lower is better)
Translates to: TICTLLTLGGLT*IFSIGFCFTLT
Trigger: GGTGAGGGTGAAACAGAAGCCAATGCTGAAGATCAATGTGAGGCCACCCAAGGTGAGAAGGGTGCAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 90 bp GGCTTCTGTTTCACCCTCACCATCTTTCACCTCAGTGTCGTCTGGTaGGGTTTCACCTTGCCCTTCATGCTTATCTTTGCCTTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GFCFTLTIFHLSVVW*GFTLPFMLIFAFCL
Trigger: GAGGCAGAAGGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGATGGTGAGGGTGAAACAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp TCACCCAGAGCTCAATCTGCTTGTTCCACTTCATGGTaGACACATAGAGAGCGTAGGCCAACAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SPRAQSACSTSW*THRERRPTAAA
Trigger: TGCTGCTGCTGTTGGCCTACGCTCTCTATGTGTTCACCATGAAGTGGAACAAGCAGATTGAGCTCTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp TTCGCCAACCTGGTGAGCCCACCATACCATGAGGTATaGGAACATGGCTATCCAGATGATGGATCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: FANLVSPPYHEV*EHGYPDDGSQE
Trigger: TTCCTGGGATCCATCATCTGGATAGCCATGTTCTCATACCTCATGGTATGGTGGGCTCACCAGGTTGGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp TTCCCTGTTGGTGGCCGAGGCAATTCTAATGGCTGGTaGACTGGTTCTGGACAAGGGATTGTTAATTCTCCG +
Preference number: 6 (lower is better)
Translates to: FPVGGRGNSNGW*TGSGQGIVNSP
Trigger: CGGAGAATTAACAATCCCTTGTCCAGAACCAGTGCACCAGCCATTAGAATTGCCTCGGCCACCAACAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp ATGCTAGGTGCTGCTTCATCCATGATCACTGTGTCTTaGGCTGCTAGCATCCCATCCTCCACTTCAGAGCTA +
Preference number: 6 (lower is better)
Translates to: MLGAASSMITVS*AASIPSSTSEL
Trigger: TAGCTCTGAAGTGGAGGATGGGATGCTAGCAGCCCAAGACACAGTGATCATGGATGAAGCAGCACCTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp GAGTTGGGCTGGAGTTCTTCCTTTCTCCCCTGGGTTTaGGGATATAGCTTTTTACCCTCTGTCTGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: ELGWSSSFLPWV*GYSFLPSVCLE
Trigger: CTCCAGGCAGACAGAGGGTAAAAAGCTATATCCCAAAACCCAGGGGAGAAAGGAAGAACTCCAGCCCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp ATCAACATTCCCAAGAGGAAAAGAAGGCGACTCCAATaGAGCCTCTTTGGTCGGAGTAACCGCCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: INIPKRKRRRLQ*SLFGRSNRLSC
Trigger: ACAGGAGAGGCGGTTACTCCGACCAAAGAGGCTTCATTGGAGTCGCCTTCTTTTCCTCTTGGGAATGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp CTTTTTACCCTCTGTCTGCCTGGAGTTGAGATGAAGTaGCTTGGTGCTCCACTAGGTGTGGGTGGGATGTTT +
Preference number: 6 (lower is better)
Translates to: LFTLCLPGVEMK*LGAPLGVGGMF
Trigger: AAACATCCCACCCACACCTAGTGGAGCACCAAGTCACTTCATCTCAACTCCAGGCAGACAGAGGGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp TGGGATATAGCTTTTTACCCTCTGTCTGCCTGGAGTTaGGATGAAGTGACTTGGTGCTCCACTAGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: WDIAFYPLSAWS*DEVTWCSTRCG
Trigger: CCCACACCTAGTGGAGCACCAAGTCACTTCATCTCAACTCCAGGCAGACAGAGGGTAAAAAGCTATATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp GGCTATAACTGTTCTTTAGTGATGCTGGAGGGATCTTaGTTGTTCTGGGTGGATTGGGGGTGTCCTCCATTG +
Preference number: 6 (lower is better)
Translates to: GYNCSLVMLEGS*LFWVDWGCPPL
Trigger: CAATGGAGGACACCCCCAATCCACCCAGAACAACCAAGATCCCTCCAGCATCACTAAAGAACAGTTATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp TCACCCTCACCATCTTTCACCTCAGTGTCGTCTGGTTaGGTTTCACCTTGCCCTTCATGCTTATCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: SPSPSFTSVSSG*VSPCPSCLSLP
Trigger: AGGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGATGGTGAGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp TCTCACCTTGGGTGGCCTCACATTGATCTTCAGCATTaGCTTCTGTTTCACCCTCACCATCTTTCACCTCAG +
Preference number: 6 (lower is better)
Translates to: SHLGWPHIDLQH*LLFHPHHLSPQ
Trigger: CTGAGGTGAAAGATGGTGAGGGTGAAACAGAAGCCAATGCTGAAGATCAATGTGAGGCCACCCAAGGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp ATTCTAATGGCTGGTGCACTGGTTCTGGACAAGGGATaGTTAATTCTCCGGGCAGCAGTAGAGCCTTCGATG +
Preference number: 6 (lower is better)
Translates to: ILMAGALVLDKG*LILRAAVEPSM
Trigger: CATCGAAGGCTCTACTGCTGCCCGGAGAATTAACAATCCCTTGTCCAGAACCAGTGCACCAGCCATTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp TTCACCCTCACCATCTTTCACCTCAGTGTCGTCTGGTaGGGTTTCACCTTGCCCTTCATGCTTATCTTTGCC +
Preference number: 6 (lower is better)
Translates to: FTLTIFHLSVVW*GFTLPFMLIFA
Trigger: GGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGATGGTGAGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp GGTCGGTGTGTTCAGAACCATTCTCTTGAGAGAAGCTaGTGTGGTTTCTCCTGCTGTTCTCTCAAATCTGGT +
Preference number: 6 (lower is better)
Translates to: GRCVQNHSLERS*CGFSCCSLKSG
Trigger: ACCAGATTTGAGAGAACAGCAGGAGAAACCACAGCAGCTTCTCTCAAGAGAATGGTTCTGAACACACCGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp TCTTTCACCTCAGTGTCGTCTGGTTGGGTTTCACCTTaGCCTTCATGCTTATCTTTGCCTTCTGCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: SFTSVSSGWVSP*PSCLSLPSASV
Trigger: AACTGAGGCAGAAGGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp CTTTTCCCTGTTGGTGGCCGAGGCAATTCTAATGGCTaGTGCACTGGTTCTGGACAAGGGATTGTTAATTCT +
Preference number: 6 (lower is better)
Translates to: LFPVGGRGNSNG*CTGSGQGIVNS
Trigger: AGAATTAACAATCCCTTGTCCAGAACCAGTGCACCAGCCATTAGAATTGCCTCGGCCACCAACAGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp ATCTTTCACCTCAGTGTCGTCTGGTTGGGTTTCACCTaGCCCTTCATGCTTATCTTTGCCTTCTGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: IFHLSVVWLGFT*PFMLIFAFCLS
Trigger: ACTGAGGCAGAAGGCAAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS TCA 72 bp GTGTTAAGAAGGTCGGTGTGTTCAGAACCATTCTCTTaGGAGAAGCTGCTGTGGTTTCTCCTGCTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: VLRRSVCSEPFS*EKLLWFLLLFS
Trigger: AGAGAACAGCAGGAGAAACCACAGCAGCTTCTCTCAAGAGAATGGTTCTGAACACACCGACCTTCTTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CCA 72 bp TGTTTCACCCTCACCATCTTTCACCTCAGTGTCGTCTaGTTGGGTTTCACCTTGCCCTTCATGCTTATCTTT +
Preference number: 6 (lower is better)
Translates to: CFTLTIFHLSVV*LGFTLPFMLIF
Trigger: AAAGATAAGCATGAAGGGCAAGGTGAAACCCAACCAGACGACACTGAGGTGAAAGATGGTGAGGGTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp TATAACTGTTCTTTAGTGATGCTGGAGGGATCTTGGTaGTTCTGGGTGGATTGGGGGTGTCCTCCATTGCTA +
Preference number: 6 (lower is better)
Translates to: YNCSLVMLEGSW*FWVDWGCPPLL
Trigger: TAGCAATGGAGGACACCCCCAATCCACCCAGAACAACCAAGATCCCTCCAGCATCACTAAAGAACAGTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp TGGTGCTCCACTAGGTGTGGGTGGGATGTTTTCTTTTaGTCTTCTTGTGCCAGCTGTTGTAGGGCTATAACT +
Preference number: 6 (lower is better)
Translates to: WCSTRCGWDVFF*SSCASCCRAIT
Trigger: AGTTATAGCCCTACAACAGCTGGCACAAGAAGACAAAAAGAAAACATCCCACCCACACCTAGTGGAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 72 bp CTGTTCTCTCAAATCTGGTCTCTAACAGCCTATAGGTaGCCATGGTTTCTCTGTCTCTCACAGTTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LFSQIWSLTAYR*PWFLCLSQLLW
Trigger: CCACAGCAACTGTGAGAGACAGAGAAACCATGGCAACCTATAGGCTGTTAGAGACCAGATTTGAGAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS CAA 90 bp TCTACTTCATGTGTTAAGAAGGTCGGTGTGTTCAGAACCATTCTCTaGAGAGAAGCTGCTGTGGTTTCTCCTGCTGTTCTCTCAAATCTG +
Preference number: 6 (lower is better)
Translates to: STSCVKKVGVFRTIL*REAAVVSPAVLSNL
Trigger: CAGATTTGAGAGAACAGCAGGAGAAACCACAGCAGCTTCTCTCAAGAGAATGGTTCTGAACACACCGACCTTCTTAACACATGAAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8
CDS GCA 72 bp TTCTGCCTCAGTTTCCCCTTCTTGTTCTTTTCCTTCTaGCTCAGTTTCTTCTTCTTGCTCATCTTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: FCLSFPFLFFSF*LSFFFLLIFFP
Trigger: AGGAAAGAAGATGAGCAAGAAGAAGAAACTGAGGCAGAAGGAAAAGAACAAGAAGGGGAAACTGAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037798.8