Pregenerated sensors for SLC23A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029847Ensembl transcript IDs: ENSMUST00000044387.14, ENSMUST00000144079.2, ENSMUST00000147169.8, ENSMUST00000201355.4
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGGGCCAGCTCCATACTGATTATGCTCTTCATCAACACTGTTTaGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCT | + |
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Preference number: 1 (lower is better) Translates to: PGASSILIMLFINTV*PPRYPGVEGPGKDP Trigger: AGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTGTTGATGAAGAGCATAATCAGTATGGAGCTGGCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR TCA 90 bp | TTCAGCAAACAGCCCGCCCCTGTTCCACAGCACGCCTCCTCCTCCTaGTCCACCAGAATATTGCTGAGCATTGTCGAAGAGCAAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: FSKQPAPVPQHASSS*STRILLSIVEEQAS Trigger: AGAAGCTTGCTCTTCGACAATGCTCAGCAATATTCTGGTGGATCAGGAGGAGGAGGCGTGCTGTGGAACAGGGGCGGGCTGTTTGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CCA 90 bp | GCTGGGGATGGTTGTGAGCCACCATGTGGGTACTGGGAATTGAACTaGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACT | + |
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Preference number: 1 (lower is better) Translates to: AGDGCEPPCGYWELN*DPQQKLVFLTMEPT Trigger: AGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAGTTCAATTCCCAGTACCCACATGGTGGCTCACAACCATCCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR TCA 90 bp | CTGTTCCACAGCACGCCTCCTCCTCCTGATCCACCAGAATATTGCTaGGCATTGTCGAAGAGCAAGCTTCTTTCTTTTGAAAGTGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: LFHSTPPPPDPPEYC*ALSKSKLLSFESGF Trigger: AAACCCACTTTCAAAAGAAAGAAGCTTGCTCTTCGACAATGCTCAGCAATATTCTGGTGGATCAGGAGGAGGAGGCGTGCTGTGGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CCA 90 bp | ATGAGTGTTTTGCTTACATGTACATCTGTGCACCACATATGTTCCTaGTACAGAGGTCAGAAGAGGGTGTCAGATCCCCTGGAACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: MSVLLTCTSVHHICS*YRGQKRVSDPLELQ Trigger: CTGCAGTTCCAGGGGATCTGACACCCTCTTCTGACCTCTGTACCAGGAACATATGTGGTGCACAGATGTACATGTAAGCAAAACACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR TCA 90 bp | ACCAGAATATTGCTGAGCATTGTCGAAGAGCAAGCTTCTTTCTTTTaGAAGTGGGTTTGGTCAAGCAAAAAGAGTTCCTGTTGTCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: TRILLSIVEEQASFF*KWVWSSKKSSCCLK Trigger: CTTTAGACAACAGGAACTCTTTTTGCTTGACCAAACCCACTTTCAAAAGAAAGAAGCTTGCTCTTCGACAATGCTCAGCAATATTCTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CAA 90 bp | CCCTGGGGCCAGCTCCATACTGATTATGCTCTTCATCAACACTGTTaGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: PWGQLHTDYALHQHC*ATTVSRCGRSWEGP Trigger: GGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTGTTGATGAAGAGCATAATCAGTATGGAGCTGGCCCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR TCA 90 bp | AGCCGCCCAGCTAGCCTTAAAGGCTGCCTGGCCTCGTCAGCTTTCAGCAAACAGTTTCCCTGGCTCATATaGCTCAGAGCCTATCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SRPASLKGCLASSAFSKQFPWLI*LRAYQN Trigger: ATTTTGATAGGCTCTGAGTCATATGAGCCAGGGAAA...CTGTTTGCTGAAAGCTGACGAGGCCAGGCAGCCTTTAAGGCTAGCTGGGCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CAA 90 bp | ACTGCAGCTGGGGATGGTTGTGAGCCACCATGTGGGTACTGGGAATaGAACTGGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: TAAGDGCEPPCGYWE*NWDPQQKLVFLTME Trigger: CTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAGTTCAATTCCCAGTACCCACATGGTGGCTCACAACCATCCCCAGCTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGGAGCCAGGAGACAGTAGAAGGATGCCCTGGGGCCAGCTCCATACTGATGTGAACATAGATCTTTaGATTTTGCAGGCCAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: TLEPGDSRRMPWGQLHTDVNIDL*ILQARV Trigger: AACTCTGGCCTGCAAAATGCAAAGATCTATGTTCAC...ATCAGTATGGAGCTGGCCCCAGGGCATCCTTCTACTGTCTCCTGGCTCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCAGCATCCCTAAGTAGAAGGATGCCCTaGGGCCAGCTCCATACTGAT | + |
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Preference number: 2 (lower is better) Translates to: SSAKTSVLNHGANSPASLSRRMP*GQLHTD Trigger: ATCAGTATGGAGCTGGCCCCAGGGCATCCTTCTACT...TAGGGATGCTGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR TCA 90 bp | TCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCAGCATCCCTACAAGCTTCTTTCTTTTaGAAGTGGGTTTGGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSAKTSVLNHGANSPASLQASFF*KWVWSS Trigger: GCTTGACCAAACCCACTTTCAAAAGAAAGAAGCTTG...TAGGGATGCTGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGGGTTTGGTCAAGCAAAAAGAGTTCCTGTTGTCTAAAGTAGGGTTGGGAGGAAGGACCCTTGTGTaGCTATTTGTGAACATAGAT | + |
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Preference number: 2 (lower is better) Translates to: KVGLVKQKEFLLSKVGLGGRTLV*LFVNID Trigger: ATCTATGTTCACAAATAGTCACACAAGGGTCCTTCC...TCCCAACCCTACTTTAGACAACAGGAACTCTTTTTGCTTGACCAAACCCACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CAA 90 bp | CACCAGAATATTGCTGAGCATTGTCGAAGAGCAAGCTTCTTTCTTTaGAAAGTGGGTTTGGTCAAGCAAAAAGAGTTCCTGTTGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: HQNIAEHCRRASFFL*KVGLVKQKEFLLSK Trigger: TTTAGACAACAGGAACTCTTTTTGCTTGACCAAACCCACTTTCAAAAGAAAGAAGCTTGCTCTTCGACAATGCTCAGCAATATTCTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCCGCCCAGCTAGCCTTAAAGGCTGCCTGGCCTCGTCAGCTTTCAGCAAACTTCATCAACACTGTTaGGCCACCACGGTATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PSRPASLKGCLASSAFSKLHQHC*ATTVSR Trigger: CCTGGATACCGTGGTGGCCAAACAGTGTTGATGAAG...TTTGCTGAAAGCTGACGAGGCCAGGCAGCCTTTAAGGCTAGCTGGGCGGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR GCA 72 bp | CCTCGTCCACTCTGGAGCCAGGAGACAGTAGAAGGATaGCCTGGGGCCAGCTCCATACTGATTATGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PRPLWSQETVEG*PGASSILIMLF Trigger: GAAGAGCATAATCAGTATGGAGCTGGCCCCAGGGCATCCTTCTACTGTCTCCTGGCTCCAGAGTGGACGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR TCA 72 bp | TGTCAGATCCCCTGGAACTGCAGCTGGGGATGGTTGTaGGCCACCATGTGGGTACTGGGAATTGAACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: CQIPWNCSWGWL*ATMWVLGIELG Trigger: TCCCAGTTCAATTCCCAGTACCCACATGGTGGCTCACAACCATCCCCAGCTGCAGTTCCAGGGGATCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CCA 72 bp | TCCACTCTGGAGCCAGGAGACAGTAGAAGGATGCCCTaGGGCCAGCTCCATACTGATTATGCTCTTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: STLEPGDSRRMP*GQLHTDYALHQ Trigger: TTGATGAAGAGCATAATCAGTATGGAGCTGGCCCCAGGGCATCCTTCTACTGTCTCCTGGCTCCAGAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CCA 72 bp | GCAGCTGGGGATGGTTGTGAGCCACCATGTGGGTACTaGGAATTGAACTGGGATCCTCAGCAAAAACTAGTG | + |
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Preference number: 3 (lower is better) Translates to: AAGDGCEPPCGY*ELNWDPQQKLV Trigger: CACTAGTTTTTGCTGAGGATCCCAGTTCAATTCCCAGTACCCACATGGTGGCTCACAACCATCCCCAGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | GTAGGGTTGGGAGAGGTCCTTTCCCTGGCTCATATGACTCAGAGCCTATCAAAATTTGCAGGCCAGAGTTaGGCTATGAGAAGGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VGLGEVLSLAHMTQSLSKFAGQS*AMRRLG Trigger: CCCCAACCTTCTCATAGCCAAACTCTGGCCTGCAAA...TTTTGATAGGCTCTGAGTCATATGAGCCAGGGAAAGGACCTCTCCCAACCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTATAGATCTTTGCATTTaGCAGGCCAGAGTTTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: CLATTVSRCGRSWEGPLCIDLCI*QARVWL Trigger: TAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTAT...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| 3UTR CCA 72 bp | TTGCTTACATGTACATCTGTGCACCACATATGTTCCTaGTACAGAGGTCAGAAGAGGGTGTCAGATCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLTCTSVHHICS*YRGQKRVSDPL Trigger: CAGGGGATCTGACACCCTCTTCTGACCTCTGTACCAGGAACATATGTGGTGCACAGATGTACATGTAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | CACATATGTTCCTGGTACAGAGGTCAGAAGAGGGTGTCAGATCCCCTGGAACTGCTTTTGAAAGTGGGTTaGGTCAAGCAAAAAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: HICSWYRGQKRVSDPLELLLKVG*VKQKEF Trigger: GAACTCTTTTTGCTTGACCAAACCCACTTTCAAAAG...CAGTTCCAGGGGATCTGACACCCTCTTCTGACCTCTGTACCAGGAACATATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR CCA 72 bp | GGTTGTGAGCCACCATGTGGGTACTGGGAATTGAACTaGGATCCTCAGCAAAAACTAGTGTTCTTAACCATG | + |
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Preference number: 3 (lower is better) Translates to: GCEPPCGYWELN*DPQQKLVFLTM Trigger: CATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAGTTCAATTCCCAGTACCCACATGGTGGCTCACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | GAACTGGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCACAAAAAGAGTTCCTGTaGTCTAAAGTAGGGTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ELGSSAKTSVLNHGANSPQKEFL*SKVGLG Trigger: TCCCAACCCTACTTTAGACAACAGGAACTCTTTTTG...TGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR TCA 72 bp | TTCCCTGGCTCATATGACTCAGAGCCTATCAAAATTTaGAGACCTAAGCCTGATTCTCCCTGGGAAATAGTG | + |
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Preference number: 3 (lower is better) Translates to: FPGSYDSEPIKI*RPKPDSPWEIV Trigger: CACTATTTCCCAGGGAGAATCAGGCTTAGGTCTTCAAATTTTGATAGGCTCTGAGTCATATGAGCCAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | ATGTATATGAGTGTTTTGCTTACATGTACATCTGTGCACCACATATGTTCCTGGTTGTCTAAAGTAGGGTaGGGAGAGGTCCTTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: MYMSVLLTCTSVHHICSWLSKVG*GEVLSL Trigger: CAGGGAAAGGACCTCTCCCAACCCTACTTTAGACAA...CCAGGAACATATGTGGTGCACAGATGTACATGTAAGCAAAACACTCATATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTTACATGTACATCTGTGCACCACATATGTTCCTGGTACAGAGGTCAGAAATAGATCTTTGCATTTaGCAGGCCAGAGTTTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: FAYMYICAPHMFLVQRSEIDLCI*QARVWL Trigger: TAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTAT...TTCTGACCTCTGTACCAGGAACATATGTGGTGCACAGATGTACATGTAAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| 3UTR TCA 72 bp | TTGCTGAGCATTGTCGAAGAGCAAGCTTCTTTCTTTTaGAAGTGGGTTTGGTCAAGCAAAAAGAGTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LLSIVEEQASFF*KWVWSSKKSSC Trigger: ACAGGAACTCTTTTTGCTTGACCAAACCCACTTTCAAAAGAAAGAAGCTTGCTCTTCGACAATGCTCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR GCA 90 bp | ACTCTGGAGCCAGGAGACAGTAGAAGGATGCCCTGGGGCCAGCTCCATACTGATAGTTCCCCAGGCCCCTaGCAGCAGGCAGCCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLEPGDSRRMPWGQLHTDSSPGP*QQAAKA Trigger: GGCCTTGGCTGCCTGCTGGCAGGGGCCTGGGGAACT...ATCAGTATGGAGCTGGCCCCAGGGCATCCTTCTACTGTCTCCTGGCTCCAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR TCA 90 bp | CCTGATTCTCCCTGGGAAATAGTGGAGATCCCAGACCCCTCGTCCACTCTGGAGAGACTCCAGCCAGGCTaGTGGTGGGGAGGCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: PDSPWEIVEIPDPSSTLERLQPG*WWGGPT Trigger: AGTGGGGCCTCCCCACCATCAGCCTGGCTGGAGTCT...CTCCAGAGTGGACGAGGGGTCTGGGATCTCCACTATTTCCCAGGGAGAATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR TCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGATGTGCAGAACCTGGTaGTGCCCAGCGCCCCGACGT | + |
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Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVMCRTW*CPAPRR Trigger: ACGTCGGGGCGCTGGGCATCACCAGGTTCTGCACAT...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR CCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGGAGGCCCCACTGCCCTaGGTAAGGGAAGCGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVEAPLP*VREAEP Trigger: TGGTTCCGCTTCCCTTACCCAGGGCAGTGGGGCCTC...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTCTTGGCCAGGATGAGTaGCACAGCCACGAGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCLGQDE*HSHEAP Trigger: GGGGGCCTCGTGGCTGTGCCACTCATCCTGGCCAAG...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR GCA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGGTCAGAGGGTCATGCTaGAGGCACAGGTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVVRGSC*RHRSLA Trigger: GGCCAAGGACCTGTGCCTGCAGCATGACCCTCTGAC...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGATGTTTTGGAGGGGGTaGGGCACCAACCAGCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVMFWRG*GTNQPS Trigger: GCTCGGCTGGTTGGTGCCCCACCCCCTCCAAAACAT...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | CACTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGGTGGTCTAGCCTaGGCCAGAAGGGGAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: HCLATTVSRCGRSWEGPLCGGLA*ARRGGV Trigger: GACTCCTCCCCTTCTGGCCCAGGCTAGACCACCACA...CAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGTCTGGGAACACAGAGTaGGCTGGCTCACTCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVSGNTE*AGSLPP Trigger: AGGTGGGAGTGAGCCAGCTCACTCTGTGTTCCCAGA...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR GCA 90 bp | CACTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGGGCCATGTATCCATATaGCGTGGGGGACTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HCLATTVSRCGRSWEGPLGHVSI*RGGLRE Trigger: CTCCCTGAGTCCCCCACGGCATATGGATACATGGCC...CAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTCCCACCTCGTCTCTGTaGTGGTCTAGCCTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PPRYPGVEGPGKDPCVTIPTSSL*WSSLGQ Trigger: CTGGCCCAGGCTAGACCACCACAGAGACGAGGTGGG...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGTCACCCAGTTGGGGATaGCGAGCCCACAGTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVSPSWG*RAHSRW Trigger: CCATCTACTGTGGGCTCGCCATCCCCAACTGGGTGA...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTCACCTGGCTGGCATTaGGAGTCCACTCTGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVSPGWH*ESTLGI Trigger: AATGCCCAGAGTGGACTCTCAATGCCAGCCAGGTGA...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | TATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATTGCTCCCGACCCTGGTaGTGCCCAGCGCCCCGACGT | + |
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Preference number: 4 (lower is better) Translates to: YPGVEGPGKDPCVTICEHCSRPW*CPAPRR Trigger: ACGTCGGGGCGCTGGGCATCACCAGGGTCGGGAGCA...ATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGCAGGAAGAGAGAGCATaGCCAGAGAGGGAGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVQEERA*PEREPQ Trigger: TTGTGGCTCCCTCTCTGGCCATGCTCTCTCTTCCTG...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR GCA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGCGATCTTCCCAAACATaGCCATCACCAGCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVRSSQT*PSPAAH Trigger: GTGTGCTGCTGGTGATGGGCATGTTTGGGAAGATCG...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR GCA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTCTCTCTCCTCCAGGCTaGCAGGGATGGTGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PPRYPGVEGPGKDPCVTILSPPG*QGWCCP Trigger: TGGACAACACCATCCCTGGCAGCCTGGAGGAGAGAG...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTTCTTGTTCACCCAGTTaGGGATGGCGAGCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCSCSPS*GWRAHS Trigger: ACTGTGGGCTCGCCATCCCCAACTGGGTGAACAAGA...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | TATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATAGACTCCAGCCAGGCTaGTGGTGGGGAGGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YPGVEGPGKDPCVTICEHRLQPG*WWGGPT Trigger: AGTGGGGCCTCCCCACCATCAGCCTGGCTGGAGTCT...ATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | GCCGCCCAGCTAGCCTTAAAGGCTGCCTGGCCTCGTCAGCTTTCAGCAAACAGCAGATCACTCCAGCAATaGTTCCAAAGACTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQLALKAAWPRQLSANSRSLQQ*FQRLQP Trigger: TGGCTGGAGTCTTTGGAATCATTGCTGGAGTGATCT...GCTGTTTGCTGAAAGCTGACGAGGCCAGGCAGCCTTTAAGGCTAGCTGGGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGAGGGTGCAGATGCCTaGGACGAAGAAAATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCEGADA*DEENGA Trigger: AGCACCATTTTCTTCGTCTCAGGCATCTGCACCCTC...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGGAAGAATGGGCAGCCTaGCCCCTAAAAACACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVEEWAA*PLKTLA Trigger: TGCAAGTGTTTTTAGGGGTCAGGCTGCCCATTCTTC...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTCAGGAGCACCTGGATaGCCTGATCCAGCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPRYPGVEGPGKDPCVTISGAPG*PDPAGE Trigger: TTCTCCAGCTGGATCAGGTCATCCAGGTGCTCCTGA...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGGGATCCCAGCATCACTaGCTGCAGAATCAAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVGSQHH*LQNQRE Trigger: CTCTCTTTGATTCTGCAGGCAGTGATGCTGGGATCC...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGTTCATGTCCACATACTaGAGGTTGGAGATCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVFMSTY*RLEIPT Trigger: CGTGGGGATCTCCAACCTGCAGTATGTGGACATGAA...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR GCA 90 bp | CACTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGCTGTTGGGATCCTTCTaGACCCCATCCTGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HCLATTVSRCGRSWEGPLLLGSF*TPSCFL Trigger: CAAGAAACAGGATGGGGTGCAGAAGGATCCCAACAG...CAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | AGACCTAAGCCTGATTCTCCCTGGGAAATAGTGGAGATCCCAGACCCCTCGTCCGAGCTGGTGTTCACCTaGCTGGCATTGAGAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPKPDSPWEIVEIPDPSSELVFT*LALRVH Trigger: GTGGACTCTCAATGCCAGCCAGGTGAACACCAGCTC...GGACGAGGGGTCTGGGATCTCCACTATTTCCCAGGGAGAATCAGGCTTAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR CCA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTGAGCTGGTGTTCACCTaGCTGGCATTGAGAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPRYPGVEGPGKDPCVTIELVFT*LALRVH Trigger: GTGGACTCTCAATGCCAGCCAGGTGAACACCAGCTC...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGAAACCCACTAGCATCTaGACACAGGAAGCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVKPTSI*TQEATM Trigger: CATGGTGGCTTCCTGTGTCCAGATGCTAGTGGGTTT...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTGCAGAAATCCCCCAGTaGATCCCAGCATCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPRYPGVEGPGKDPCVTIAEIPQ*IPASLP Trigger: AGGCAGTGATGCTGGGATCCACTGGGGGATTTCTGC...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCAGCACGGAACCAGGGGGCCTaGCTCAGGACGCTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSAKTSVLNHGANSPARNQGA*LRTLPL Trigger: CAAAGGCAGCGTCCTGAGCCAGGCCCCCTGGTTCCG...TGCTGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR CCA 90 bp | TATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATCGGAACCAGGGGGCCTaGCTCAGGACGCTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YPGVEGPGKDPCVTICEHRNQGA*LRTLPL Trigger: CAAAGGCAGCGTCCTGAGCCAGGCCCCCTGGTTCCG...ATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | ACCACATATGTTCCTGGTACAGAGGTCAGAAGAGGGTGTCAGATCCCCTGGAACTGTGGTGGTCTAGCCTaGGCCAGAAGGGGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTYVPGTEVRRGCQIPWNCGGLA*ARRGGV Trigger: GACTCCTCCCCTTCTGGCCCAGGCTAGACCACCACA...GTTCCAGGGGATCTGACACCCTCTTCTGACCTCTGTACCAGGAACATATGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTAGTACAGGGAAGACCTaGAACAGGTTGAACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCSTGKT*NRLNLE Trigger: CTCCAGGTTCAACCTGTTTCAGGTCTTCCCTGTACT...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGAGATCACTCCAGCAATaGTTCCAAAGACTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVRSLQQ*FQRLQP Trigger: TGGCTGGAGTCTTTGGAATCATTGCTGGAGTGATCT...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | TATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATCCCACCTCGTCTCTGTaGTGGTCTAGCCTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YPGVEGPGKDPCVTICEHPTSSL*WSSLGQ Trigger: CTGGCCCAGGCTAGACCACCACAGAGACGAGGTGGG...ATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR GCA 90 bp | AGACCTAAGCCTGATTCTCCCTGGGAAATAGTGGAGATCCCAGACCCCTCGTCCGGATCCCAGCATCACTaGCTGCAGAATCAAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPKPDSPWEIVEIPDPSSGSQHH*LQNQRE Trigger: CTCTCTTTGATTCTGCAGGCAGTGATGCTGGGATCC...GGACGAGGGGTCTGGGATCTCCACTATTTCCCAGGGAGAATCAGGCTTAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGGGTTGGGAGAGGTCCTTTCCCTGGCTCATATGACTCAGAGCCTATCAGGCCATGTATCCATATaGCGTGGGGGACTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVGLGEVLSLAHMTQSLSGHVSI*RGGLRE Trigger: CTCCCTGAGTCCCCCACGGCATATGGATACATGGCC...TGATAGGCTCTGAGTCATATGAGCCAGGGAAAGGACCTCTCCCAACCCTACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTCCCCATCCTGTTTCTTaGCTTGTCCTTCAGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCPHPVS*LVLQCE Trigger: TTCACACTGAAGGACAAGGCAAGAAACAGGATGGGG...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | GTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACATTTTTGAGGTACTaGGAAAAGAGCACGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWPPRYPGVEGPGKDPCVTFLRY*EKSTMR Trigger: CCTCATCGTGCTCTTTTCTCAGTACCTCAAAAATGT...CACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGAAGAGGTTCCTGGATaGATTCATGTCCACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCEEVPG*IHVHIL Trigger: CAGTATGTGGACATGAATTCATCCAGGAACCTCTTC...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR TCA 90 bp | TGTGAACATAGATCTTTGCATTTTGCAGGCCAGAGTTTGGCTATGAGAAGGTTGGGTCCTTGGCCAGGATaGGTGGCACAGCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEHRSLHFAGQSLAMRRLGPWPG*VAQPRG Trigger: GCCTCGTGGCTGTGCCACTCATCCTGGCCAAGGACC...CAACCTTCTCATAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTATGTTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | TGGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCAGCATATGTTTTGGAGGGGGTaGGGCACCAACCAGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDPQQKLVFLTMEPTLQHMFWRG*GTNQPS Trigger: GCTCGGCTGGTTGGTGCCCCACCCCCTCCAAAACAT...ATGCTGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR TCA 90 bp | GTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATAGATCTTTGTCTGGGAACACAGAGTaGGCTGGCTCACTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VEGPGKDPCVTICEHRSLSGNTE*AGSLPP Trigger: AGGTGGGAGTGAGCCAGCTCACTCTGTGTTCCCAGA...CAAAGATCTATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CCA 90 bp | TGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTCCTTCTTCCATAAACTaGCACAGGAACCATGACATT | + |
|
Preference number: 4 (lower is better) Translates to: CLATTVSRCGRSWEGPLCPSSIN*HRNHDI Trigger: AATGTCATGGTTCCTGTGCCAGTTTATGGAAGAAGG...ACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | TGTGAACATAGATCTTTGCATTTTGCAGGCCAGAGTTTGGCTATGAGAAGGTTGGAGGCCCCACTGCCCTaGGTAAGGGAAGCGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: CEHRSLHFAGQSLAMRRLEAPLP*VREAEP Trigger: TGGTTCCGCTTCCCTTACCCAGGGCAGTGGGGCCTC...CAACCTTCTCATAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTATGTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | GAACTGGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCATCACCTGGCTGGCATTaGGAGTCCACTCTGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ELGSSAKTSVLNHGANSPSPGWH*ESTLGI Trigger: AATGCCCAGAGTGGACTCTCAATGCCAGCCAGGTGA...TGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR CCA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTCCTTCTTCCATAAACTaGCACAGGAACCATGACATT | + |
|
Preference number: 4 (lower is better) Translates to: PPRYPGVEGPGKDPCVTIPSSIN*HRNHDI Trigger: AATGTCATGGTTCCTGTGCCAGTTTATGGAAGAAGG...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR GCA 90 bp | TGTGAACATAGATCTTTGCATTTTGCAGGCCAGAGTTTGGCTATGAGAAGGTTGTGGGTCAGAGGGTCATaGTGCAGGCACAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CEHRSLHFAGQSLAMRRLWVRGS*CRHRSL Trigger: CAAGGACCTGTGCCTGCAGCATGACCCTCTGACCCA...CAACCTTCTCATAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTATGTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR CCA 90 bp | TATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATCGAGCCCACAGTAGATaGAGAAGCCAAACACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YPGVEGPGKDPCVTICEHRAHSR*RSQTRR Trigger: TCTTCGTGTTTGGCTTCTCCATCTACTGTGGGCTCG...ATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTTGGGAGAGGTCCTTTCCCTGGCTCATATGACTCAGAGCCTATCAAAATTGAACCTGGAGATGTaGCACTTCTTCCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGLGEVLSLAHMTQSLSKLNLEM*HFFLLP Trigger: TGGAAGAAGGAAGAAGTGTCACATCTCCAGGTTCAA...TTTTGATAGGCTCTGAGTCATATGAGCCAGGGAAAGGACCTCTCCCAACCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR CCA 90 bp | GAACTGGGATCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCAAAACCCACTAGCATCTaGACACAGGAAGCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: ELGSSAKTSVLNHGANSPKPTSI*TQEATM Trigger: CATGGTGGCTTCCTGTGTCCAGATGCTAGTGGGTTT...TGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGATCCCAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR TCA 90 bp | TGTGAACATAGATCTTTGCATTTTGCAGGCCAGAGTTTGGCTATGAGAAGGTTGGAGGAGTCGGGTACATaGAGATGTGCAGAACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CEHRSLHFAGQSLAMRRLEESGT*RCAEPG Trigger: ACCAGGTTCTGCACATCTTCATGTACCCGACTCCTC...CAACCTTCTCATAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTATGTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| 3UTR CAA 72 bp | GTCAAGCAAAAAGAGTTCCTGTTGTCTAAAGTAGGGTaGGGAGAGGTCCTTTCCCTGGCTCATATGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKQKEFLLSKVG*GEVLSLAHMTQ Trigger: CTGAGTCATATGAGCCAGGGAAAGGACCTCTCCCAACCCTACTTTAGACAACAGGAACTCTTTTTGCTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTACATGTACATCTGTGCACCACATATGTTCCTGGTACAGAGGTCAGAAAGTACAGGGAAGACCTaGAACAGGTTGAACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAYMYICAPHMFLVQRSESTGKT*NRLNLE Trigger: CTCCAGGTTCAACCTGTTTCAGGTCTTCCCTGTACT...TTCTGACCTCTGTACCAGGAACATATGTGGTGCACAGATGTACATGTAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS-3UTR CCA 90 bp | TATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATACACGAAGAGGTTCCTaGATGAATTCATGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YPGVEGPGKDPCVTICEHTRRGS*MNSCPH Trigger: ATGTGGACATGAATTCATCCAGGAACCTCTTCGTGT...ATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| 3UTR CAA 72 bp | AAGGACCCTTGTGTGACTATTTGTGAACATAGATCTTaGCATTTTGCAGGCCAGAGTTTGGCTATGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KDPCVTICEHRS*HFAGQSLAMRR Trigger: CCTTCTCATAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTATGTTCACAAATAGTCACACAAGGGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTACATGTACATCTGTGCACCACATATGTTCCTGGTACAGAGGTCAGAAACATTTTTGAGGTACTaGGAAAAGAGCACGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FAYMYICAPHMFLVQRSETFLRY*EKSTMR Trigger: CCTCATCGTGCTCTTTTCTCAGTACCTCAAAAATGT...TTCTGACCTCTGTACCAGGAACATATGTGGTGCACAGATGTACATGTAAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| 3UTR CAA 72 bp | ATTGCTGAGCATTGTCGAAGAGCAAGCTTCTTTCTTTaGAAAGTGGGTTTGGTCAAGCAAAAAGAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IAEHCRRASFFL*KVGLVKQKEFL Trigger: CAGGAACTCTTTTTGCTTGACCAAACCCACTTTCAAAAGAAAGAAGCTTGCTCTTCGACAATGCTCAGCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| 3UTR CAA 72 bp | TGTCGAAGAGCAAGCTTCTTTCTTTTGAAAGTGGGTTaGGTCAAGCAAAAAGAGTTCCTGTTGTCTAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CRRASFFLLKVG*VKQKEFLLSKV Trigger: TACTTTAGACAACAGGAACTCTTTTTGCTTGACCAAACCCACTTTCAAAAGAAAGAAGCTTGCTCTTCGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS GCA 90 bp | GCCCTGGGTAAGGGAAGCGGAACCAGGGGGCCTGGCTCAGGACGCTaGCTTTGGTGTCTGTACGGGCCATGTATCCATATGCCGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGKGSGTRGPGSGR*LWCLYGPCIHMPWG Trigger: CCCCCACGGCATATGGATACATGGCCCGTACAGACACCAAAGGCAGCGTCCTGAGCCAGGCCCCCTGGTTCCGCTTCCCTTACCCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
||
| CDS GCA 90 bp | GATGGTCAGGGCAGAAATCCCCCAGTGGATCCCAGCATCACTGCCTaGAGAATCAAAGAGAGGCAGGGCCACGAGGGAAATGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DGQGRNPPVDPSITA*RIKERQGHEGNGRR Trigger: GCGCCGACCATTTCCCTCGTGGCCCTGCCTCTCTTTGATTCTGCAGGCAGTGATGCTGGGATCCACTGGGGGATTTCTGCCCTGACCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
||
| CDS CCA 90 bp | GTCTGGGAACACAGAGTGAGCTGGCTCACTCCCACCTCGTCTCTGTaGTGGTCTAGCCTGGGCCAGAAGGGGAGGAGTCGGGTACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: VWEHRVSWLTPTSSL*WSSLGQKGRSRVHE Trigger: TTCATGTACCCGACTCCTCCCCTTCTGGCCCAGGCTAGACCACCACAGAGACGAGGTGGGAGTGAGCCAGCTCACTCTGTGTTCCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS GCA 90 bp | GGTCTAGCCTGGGCCAGAAGGGGAGGAGTCGGGTACATGAAGATGTaGAGAACTTGGTGCCAATCCCCCAGGGAAGGCCGTAGACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLAWARRGGVGYMKM*RTWCQSPREGRRPL Trigger: CAAAGGTCTACGGCCTTCCCTGGGGGATTGGCACCAAGTTCTGCACATCTTCATGTACCCGACTCCTCCCCTTCTGGCCCAGGCTAGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS CCA 90 bp | TGGGAACACAGAGTGAGCTGGCTCACTCCCACCTCGTCTCTGTGGTaGTCTAGCCTGGGCCAGAAGGGGAGGAGTCGGGTACATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WEHRVSWLTPTSSLW*SSLGQKGRSRVHED Trigger: ATCTTCATGTACCCGACTCCTCCCCTTCTGGCCCAGGCTAGACCACCACAGAGACGAGGTGGGAGTGAGCCAGCTCACTCTGTGTTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | CACTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGGACTCAGGGAGGGTGTaGGTGACAGTGAGCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HCLATTVSRCGRSWEGPLDSGRV*VTVSTK Trigger: CTTCGTGCTCACTGTCACCAACACCCTCCCTGAGTC...CAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS CCA 90 bp | AAGCGCATGAGAAAGCCGATGAGGCCCGAGAAACCCACTAGCATCTaGACACAGGAAGCCACCATGATAGCGCCCTGCAGCTCTCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KRMRKPMRPEKPTSI*TQEATMIAPCSSRI Trigger: GATCCGAGAGCTGCAGGGCGCTATCATGGTGGCTTCCTGTGTCCAGATGCTAGTGGGTTTCTCGGGCCTCATCGGCTTTCTCATGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTCCACATACTGCAGGTaGGAGATCCCCACGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPRYPGVEGPGKDPCVTISTYCR*EIPTAL Trigger: CAGCGCCGTGGGGATCTCCAACCTGCAGTATGTGGA...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | CACTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGGCTGATGAGGTAGCTTaGGGTCAGAGGGTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HCLATTVSRCGRSWEGPLADEVA*GQRVML Trigger: CAGCATGACCCTCTGACCCAAAGCTACCTCATCAGC...CAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGGAAGGCCGTAGACCTTaGAGACCTTCGAAGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVEGRRP*RPSKTP Trigger: AGGAGTCTTCGAAGGTCTCAAAGGTCTACGGCCTTC...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS TCA 90 bp | CCAGAAATCCACCGACAAACATGCCTGTGGTCAGGAGCACCTGGATaGCCTGATCCAGCTGGAGAATCCCTGTCTGCAGCTTCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEIHRQTCLWSGAPG*PDPAGESLSAASQG Trigger: ACCCTGAGAAGCTGCAGACAGGGATTCTCCAGCTGGATCAGGTCATCCAGGTGCTCCTGACCACAGGCATGTTTGTCGGTGGATTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 90 bp | TCCCTGTCTGCAGCTTCTCAGGGTTCTTGTTCACCCAGTTGGGGATaGCGAGCCCACAGTAGATGGAGAAGCCAAACACGAAGAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSAASQGSCSPSWG*RAHSRWRSQTRRGS Trigger: GGAACCTCTTCGTGTTTGGCTTCTCCATCTACTGTGGGCTCGCCATCCCCAACTGGGTGAACAAGAACCCTGAGAAGCTGCAGACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS-3UTR CAA 90 bp | CCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTTCACCTGGCTGGCATaGAGAGTCCACTCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPRYPGVEGPGKDPCVTIFTWLA*RVHSGH Trigger: ATGCCCAGAGTGGACTCTCAATGCCAGCCAGGTGAA...AATAGTCACACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTCTCCCTGGGAAATAGTGGAGATCCCAGACCCCTCGTCCACTCTGGAGATGCCAATGCCACGGTaGATGGCATGTTTTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDSPWEIVEIPDPSSTLEMPMPR*MACFGG Trigger: CCCTCCAAAACATGCCATCAACCGTGGCATTGGCAT...CTCCAGAGTGGACGAGGGGTCTGGGATCTCCACTATTTCCCAGGGAGAATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
||
| CDS CCA 90 bp | CTCTTCTGCCACTCCTCGATGAATTCAGGAGAGCTGGTGTTCACCTaGCTGGCATTGAGAGTCCACTCTGGGCATTTCCAGGCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFCHSSMNSGELVFT*LALRVHSGHFQAGR Trigger: TCTTCCTGCCTGGAAATGCCCAGAGTGGACTCTCAATGCCAGCCAGGTGAACACCAGCTCTCCTGAATTCATCGAGGAGTGGCAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS CCA 90 bp | GGAGAATCCCTGTCTGCAGCTTCTCAGGGTTCTTGTTCACCCAGTTaGGGATGGCGAGCCCACAGTAGATGGAGAAGCCAAACACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GESLSAASQGSCSPS*GWRAHSRWRSQTRR Trigger: TCTTCGTGTTTGGCTTCTCCATCTACTGTGGGCTCGCCATCCCCAACTGGGTGAACAAGAACCCTGAGAAGCTGCAGACAGGGATTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | CTGTTTGGCCACCACGGTATCCAGGTGTGGAAGGTCCTGGGAAGGACCCTTGTGATCCTGTTTCTTGCCTaGTCCTTCAGTGTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFGHHGIQVWKVLGRTLVILFLA*SFSVKA Trigger: AGCCTTCACACTGAAGGACAAGGCAAGAAACAGGAT...CACAAGGGTCCTTCCCAGGACCTTCCACACCTGGATACCGTGGTGGCCAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS GCA 90 bp | GGATCCCCAAGAAGATGCAGAGATACCATGGTGGGCTATCCAGGATaGCATAGGCCAGGTTACTGTTACTGTTGGGATCCTTCTGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPRRCRDTMVGYPG*HRPGYCYCWDPSAP Trigger: GGGTGCAGAAGGATCCCAACAGTAACAGTAACCTGGCCTATGGCATCCTGGATAGCCCACCATGGTATCTCTGCATCTTCTTGGGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS TCA 90 bp | TGTGCAGAACTTGGTGCCAATCCCCCAGGGAAGGCCGTAGACCTTTaGGACCTTCGAAGACTCCTCAGAATCCTCCTGGATTTTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CAELGANPPGKAVDL*DLRRLLRILLDFTP Trigger: TGGAGTAAAATCCAGGAGGATTCTGAGGAGTCTTCGAAGGTCTCAAAGGTCTACGGCCTTCCCTGGGGGATTGGCACCAAGTTCTGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS CCA 90 bp | ATGGTGGGCTATCCAGGATGCCATAGGCCAGGTTACTGTTACTGTTaGGATCCTTCTGCACCCCATCCTGTTTCTTGCCTTGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MVGYPGCHRPGYCYC*DPSAPHPVSCLVLQ Trigger: CTGAAGGACAAGGCAAGAAACAGGATGGGGTGCAGAAGGATCCCAACAGTAACAGTAACCTGGCCTATGGCATCCTGGATAGCCCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 90 bp | TGTGAGGAAGTGCTGGATCCCCAAGAAGATGCAGAGATACCATGGTaGGCTATCCAGGATGCCATAGGCCAGGTTACTGTTACTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CEEVLDPQEDAEIPW*AIQDAIGQVTVTVG Trigger: CCCAACAGTAACAGTAACCTGGCCTATGGCATCCTGGATAGCCCACCATGGTATCTCTGCATCTTCTTGGGGATCCAGCACTTCCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 90 bp | GGCTGTGAGGAAGTGCTGGATCCCCAAGAAGATGCAGAGATACCATaGTGGGCTATCCAGGATGCCATAGGCCAGGTTACTGTTACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCEEVLDPQEDAEIP*WAIQDAIGQVTVTV Trigger: AACAGTAACAGTAACCTGGCCTATGGCATCCTGGATAGCCCACCATGGTATCTCTGCATCTTCTTGGGGATCCAGCACTTCCTCACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | GTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATAGATCTTTGGACTCAGGGAGGGTGTaGGTGACAGTGAGCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VEGPGKDPCVTICEHRSLDSGRV*VTVSTK Trigger: CTTCGTGCTCACTGTCACCAACACCCTCCCTGAGTC...CAAAGATCTATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGGTCCTGGGAAGGACCCTTGTGTGACTATTTGTGAACATAGATCTTTGGGCAAAGGTCCCTCCTaGAAGAATGGGCAGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VEGPGKDPCVTICEHRSLGKGPS*KNGQPD Trigger: GTCAGGCTGCCCATTCTTCAAGGAGGGACCTTTGCC...CAAAGATCTATGTTCACAAATAGTCACACAAGGGTCCTTCCCAGGACCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS-3UTR CAA 90 bp | TCCTCAGCAAAAACTAGTGTTCTTAACCATGGAGCCAACTCTCCAGCATCCCTATTCACCTGGCTGGCATaGAGAGTCCACTCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSAKTSVLNHGANSPASLFTWLA*RVHSGH Trigger: ATGCCCAGAGTGGACTCTCAATGCCAGCCAGGTGAA...TAGGGATGCTGGAGAGTTGGCTCCATGGTTAAGAACACTAGTTTTTGCTGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS-3UTR CAA 90 bp | TGTGAACATAGATCTTTGCATTTTGCAGGCCAGAGTTTGGCTATGAGAAGGTTGTGCAGGCACAGGTCCTaGGCCAGGATGAGTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CEHRSLHFAGQSLAMRRLCRHRS*ARMSGT Trigger: TGTGCCACTCATCCTGGCCAAGGACCTGTGCCTGCA...CAACCTTCTCATAGCCAAACTCTGGCCTGCAAAATGCAAAGATCTATGTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS TCA 90 bp | ACGAGAGGCACAGAGCTAGCAGTACAGGGAAGACCTGAAACAGGTTaGACCTGGAGATGTGACACTTCTTCCTTCTTCCATAAACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRGTELAVQGRPETG*TWRCDTSSFFHKLA Trigger: TGCCAGTTTATGGAAGAAGGAAGAAGTGTCACATCTCCAGGTTCAACCTGTTTCAGGTCTTCCCTGTACTGCTAGCTCTGTGCCTCTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS CCA 90 bp | CAGGTTGAACCTGGAGATGTGACACTTCTTCCTTCTTCCATAAACTaGCACAGGAACCATGACATTTTTGAGGTACTGAGAAAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QVEPGDVTLLPSSIN*HRNHDIFEVLRKEH Trigger: GTGCTCTTTTCTCAGTACCTCAAAAATGTCATGGTTCCTGTGCCAGTTTATGGAAGAAGGAAGAAGTGTCACATCTCCAGGTTCAACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS TCA 72 bp | CCGCGGCAACAATCACCATCCTGCTCCCGACCCTGGTaGTGCCCAGCGCCCCGACGTTCTCACTGTAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: PRQQSPSCSRPW*CPAPRRSHCRT Trigger: CGTCCTACAGTGAGAACGTCGGGGCGCTGGGCATCACCAGGGTCGGGAGCAGGATGGTGATTGTTGCCGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS CCA 72 bp | CACAGAGTGAGCTGGCTCACTCCCACCTCGTCTCTGTaGTGGTCTAGCCTGGGCCAGAAGGGGAGGAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: HRVSWLTPTSSL*WSSLGQKGRSR Trigger: CCGACTCCTCCCCTTCTGGCCCAGGCTAGACCACCACAGAGACGAGGTGGGAGTGAGCCAGCTCACTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS CCA 72 bp | AGCGGAACCAGGGGGCCTGGCTCAGGACGCTGCCTTTaGTGTCTGTACGGGCCATGTATCCATATGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGTRGPGSGRCL*CLYGPCIHMPW Trigger: CCACGGCATATGGATACATGGCCCGTACAGACACCAAAGGCAGCGTCCTGAGCCAGGCCCCCTGGTTCCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS CCA 72 bp | GGCTCACTCCCACCTCGTCTCTGTGGTGGTCTAGCCTaGGCCAGAAGGGGAGGAGTCGGGTACATGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSLPPRLCGGLA*ARRGGVGYMKM Trigger: CATCTTCATGTACCCGACTCCTCCCCTTCTGGCCCAGGCTAGACCACCACAGAGACGAGGTGGGAGTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
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| CDS CAA 72 bp | AAGCGGAACCAGGGGGCCTGGCTCAGGACGCTGCCTTaGGTGTCTGTACGGGCCATGTATCCATATGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KRNQGAWLRTLP*VSVRAMYPYAV Trigger: CACGGCATATGGATACATGGCCCGTACAGACACCAAAGGCAGCGTCCTGAGCCAGGCCCCCTGGTTCCGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS TCA 72 bp | GGAGGAGTCGGGTACATGAAGATGTGCAGAACCTGGTaGTGCCCAGCGCCCCGACGTTCTCACTGTAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GGVGYMKMCRTW*CPAPRRSHCRT Trigger: CGTCCTACAGTGAGAACGTCGGGGCGCTGGGCATCACCAGGTTCTGCACATCTTCATGTACCCGACTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044387.14 |
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| CDS GCA 72 bp | AAGGGAAGCGGAACCAGGGGGCCTGGCTCAGGACGCTaGCTTTGGTGTCTGTACGGGCCATGTATCCATATG | + |
|
Preference number: 6 (lower is better) Translates to: KGSGTRGPGSGR*LWCLYGPCIHM Trigger: CATATGGATACATGGCCCGTACAGACACCAAAGGCAGCGTCCTGAGCCAGGCCCCCTGGTTCCGCTTCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS GCA 72 bp | TGGGCCAGAAGGGGAGGAGTCGGGTACATGAAGATGTaGAGAACTTGGTGCCAATCCCCCAGGGAAGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WARRGGVGYMKM*RTWCQSPREGR Trigger: ACGGCCTTCCCTGGGGGATTGGCACCAAGTTCTGCACATCTTCATGTACCCGACTCCTCCCCTTCTGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 72 bp | GCCAATGCCACGGTTGATGGCATGTTTTGGAGGGGGTaGGGCACCAACCAGCCGAGCACAGGCGTGATAATC | + |
|
Preference number: 6 (lower is better) Translates to: ANATVDGMFWRG*GTNQPSTGVII Trigger: GATTATCACGCCTGTGCTCGGCTGGTTGGTGCCCCACCCCCTCCAAAACATGCCATCAACCGTGGCATTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS CAA 90 bp | GTACGGGCCATGTATCCATATGCCGTGGGGGACTCAGGGAGGGTGTaGGTGACAGTGAGCACGAAGCAAAAGAGCCACGAGAGGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: VRAMYPYAVGDSGRV*VTVSTKQKSHERHR Trigger: TCTGTGCCTCTCGTGGCTCTTTTGCTTCGTGCTCACTGTCACCAACACCCTCCCTGAGTCCCCCACGGCATATGGATACATGGCCCGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS GCA 72 bp | AGCATCTGGACACAGGAAGCCACCATGATAGCGCCCTaGAGCTCTCGGATCCTCTTCTGCCACTCCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SIWTQEATMIAP*SSRILFCHSSM Trigger: CATCGAGGAGTGGCAGAAGAGGATCCGAGAGCTGCAGGGCGCTATCATGGTGGCTTCCTGTGTCCAGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS CCA 72 bp | AGAAAGCCGATGAGGCCCGAGAAACCCACTAGCATCTaGACACAGGAAGCCACCATGATAGCGCCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RKPMRPEKPTSI*TQEATMIAPCS Trigger: GCTGCAGGGCGCTATCATGGTGGCTTCCTGTGTCCAGATGCTAGTGGGTTTCTCGGGCCTCATCGGCTTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS TCA 72 bp | CCTGCAGCTCTCGGATCCTCTTCTGCCACTCCTCGATaGATTCAGGAGAGCTGGTGTTCACCTGGCTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAALGSSSATPR*IQESWCSPGWH Trigger: ATGCCAGCCAGGTGAACACCAGCTCTCCTGAATTCATCGAGGAGTGGCAGAAGAGGATCCGAGAGCTGCAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS TCA 72 bp | ACAGGTGATTTCCAGAGGAGGTCTGGGAACACAGAGTaGGCTGGCTCACTCCCACCTCGTCTCTGTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGDFQRRSGNTE*AGSLPPRLCGG Trigger: ACCACCACAGAGACGAGGTGGGAGTGAGCCAGCTCACTCTGTGTTCCCAGACCTCCTCTGGAAATCACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044387.14 ENSMUST00000201355.4 |
||
| CDS TCA 72 bp | CACCGACAAACATGCCTGTGGTCAGGAGCACCTGGATaGCCTGATCCAGCTGGAGAATCCCTGTCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HRQTCLWSGAPG*PDPAGESLSAA Trigger: AGCTGCAGACAGGGATTCTCCAGCTGGATCAGGTCATCCAGGTGCTCCTGACCACAGGCATGTTTGTCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS TCA 72 bp | CTTGGTGCCAATCCCCCAGGGAAGGCCGTAGACCTTTaGGACCTTCGAAGACTCCTCAGAATCCTCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LGANPPGKAVDL*DLRRLLRILLD Trigger: ATCCAGGAGGATTCTGAGGAGTCTTCGAAGGTCTCAAAGGTCTACGGCCTTCCCTGGGGGATTGGCACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS GCA 72 bp | ACCATGATAGCGCCCTGCAGCTCTCGGATCCTCTTCTaGCACTCCTCGATGAATTCAGGAGAGCTGGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TMIAPCSSRILF*HSSMNSGELVF Trigger: GAACACCAGCTCTCCTGAATTCATCGAGGAGTGGCAGAAGAGGATCCGAGAGCTGCAGGGCGCTATCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
||
| CDS CCA 72 bp | GCAGCTTCTCAGGGTTCTTGTTCACCCAGTTGGGGATaGCGAGCCCACAGTAGATGGAGAAGCCAAACACGA | + |
|
Preference number: 6 (lower is better) Translates to: AASQGSCSPSWG*RAHSRWRSQTR Trigger: TCGTGTTTGGCTTCTCCATCTACTGTGGGCTCGCCATCCCCAACTGGGTGAACAAGAACCCTGAGAAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS CCA 72 bp | CTGTCTGCAGCTTCTCAGGGTTCTTGTTCACCCAGTTaGGGATGGCGAGCCCACAGTAGATGGAGAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSAASQGSCSPS*GWRAHSRWRSQ Trigger: TTGGCTTCTCCATCTACTGTGGGCTCGCCATCCCCAACTGGGTGAACAAGAACCCTGAGAAGCTGCAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
||
| CDS CAA 72 bp | ATGTATCCATATGCCGTGGGGGACTCAGGGAGGGTGTaGGTGACAGTGAGCACGAAGCAAAAGAGCCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: MYPYAVGDSGRV*VTVSTKQKSHE Trigger: CTCGTGGCTCTTTTGCTTCGTGCTCACTGTCACCAACACCCTCCCTGAGTCCCCCACGGCATATGGATACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000147169.8 ENSMUST00000201355.4 |
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| CDS CAA 72 bp | GTTGGGATCCTTCTGCACCCCATCCTGTTTCTTGCCTaGTCCTTCAGTGTGAAGGCTGAGCACACCATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGILLHPILFLA*SFSVKAEHTIA Trigger: GGCGATGGTGTGCTCAGCCTTCACACTGAAGGACAAGGCAAGAAACAGGATGGGGTGCAGAAGGATCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS TCA 72 bp | ACAAACATGCCTGTGGTCAGGAGCACCTGGATGACCTaGTCCAGCTGGAGAATCCCTGTCTGCAGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TNMPVVRSTWMT*SSWRIPVCSFS Trigger: TGAGAAGCTGCAGACAGGGATTCTCCAGCTGGATCAGGTCATCCAGGTGCTCCTGACCACAGGCATGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS GCA 72 bp | CGAAGACTCCTCAGAATCCTCCTGGATTTTACTCCATaGCAAAAGGCCTCTCTCCTCCAGGCTGCCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RRLLRILLDFTP*QKASLLQAARD Trigger: ATCCCTGGCAGCCTGGAGGAGAGAGGCCTTTTGGCATGGAGTAAAATCCAGGAGGATTCTGAGGAGTCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 72 bp | GTGCTGGATCCCCAAGAAGATGCAGAGATACCATGGTaGGCTATCCAGGATGCCATAGGCCAGGTTACTGTT | + |
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Preference number: 6 (lower is better) Translates to: VLDPQEDAEIPW*AIQDAIGQVTV Trigger: AACAGTAACCTGGCCTATGGCATCCTGGATAGCCCACCATGGTATCTCTGCATCTTCTTGGGGATCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 72 bp | GAAGTGCTGGATCCCCAAGAAGATGCAGAGATACCATaGTGGGCTATCCAGGATGCCATAGGCCAGGTTACT | + |
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Preference number: 6 (lower is better) Translates to: EVLDPQEDAEIP*WAIQDAIGQVT Trigger: AGTAACCTGGCCTATGGCATCCTGGATAGCCCACCATGGTATCTCTGCATCTTCTTGGGGATCCAGCACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 72 bp | TGTTCACCCAGTTGGGGATGGCGAGCCCACAGTAGATaGAGAAGCCAAACACGAAGAGGTTCCTGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: CSPSWGWRAHSR*RSQTRRGSWMN Trigger: ATTCATCCAGGAACCTCTTCGTGTTTGGCTTCTCCATCTACTGTGGGCTCGCCATCCCCAACTGGGTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CAA 72 bp | ATGAATTCAGGAGAGCTGGTGTTCACCTGGCTGGCATaGAGAGTCCACTCTGGGCATTTCCAGGCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: MNSGELVFTWLA*RVHSGHFQAGR Trigger: TCTTCCTGCCTGGAAATGCCCAGAGTGGACTCTCAATGCCAGCCAGGTGAACACCAGCTCTCCTGAATTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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| CDS CAA 90 bp | ATGTGCAGAACTTGGTGCCAATCCCCCAGGGAAGGCCGTAGACCTTaGAGACCTTCGAAGACTCCTCAGAATCCTCCTGGATTTTACTCC | + |
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Preference number: 6 (lower is better) Translates to: MCRTWCQSPREGRRP*RPSKTPQNPPGFYS Trigger: GGAGTAAAATCCAGGAGGATTCTGAGGAGTCTTCGAAGGTCTCAAAGGTCTACGGCCTTCCCTGGGGGATTGGCACCAAGTTCTGCACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS GCA 72 bp | AGAAGATGCAGAGATACCATGGTGGGCTATCCAGGATaGCATAGGCCAGGTTACTGTTACTGTTGGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: RRCRDTMVGYPG*HRPGYCYCWDP Trigger: AGGATCCCAACAGTAACAGTAACCTGGCCTATGGCATCCTGGATAGCCCACCATGGTATCTCTGCATCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS CCA 72 bp | ACCTTTGAGACCTTCGAAGACTCCTCAGAATCCTCCTaGATTTTACTCCATGCCAAAAGGCCTCTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TFETFEDSSESS*ILLHAKRPLSS Trigger: GGAGGAGAGAGGCCTTTTGGCATGGAGTAAAATCCAGGAGGATTCTGAGGAGTCTTCGAAGGTCTCAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201355.4 |
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| CDS TCA 72 bp | ACAGAGCTAGCAGTACAGGGAAGACCTGAAACAGGTTaGACCTGGAGATGTGACACTTCTTCCTTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TELAVQGRPETG*TWRCDTSSFFH Trigger: ATGGAAGAAGGAAGAAGTGTCACATCTCCAGGTTCAACCTGTTTCAGGTCTTCCCTGTACTGCTAGCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044387.14 ENSMUST00000144079.2 ENSMUST00000201355.4 |
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