Pregenerated sensors for SLC23A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024354Ensembl transcript IDs: ENSMUST00000025212.8, ENSMUST00000237305.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGTAGACCAGGATGGCCTCAAACTCAGAAATCCACCTGCCTCTaGCTCTGCCTCCACAGAGTGCCAGGAGCCACCACTGCCCGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPQTQKSTCL*LCLHRVPGATTARH Trigger: GTGCCGGGCAGTGGTGGCTCCTGGCACTCTGTGGAGGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCATCCTGGTCTACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR TCA 90 bp | GCAGCCCCATCAGCCCAATCACCACCTCCACCATACTGGACACCATaGTTGCACCCTGGACCTCCCGGATACGAGGATGCCAGATATGGG | + |
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Preference number: 1 (lower is better) Translates to: AAPSAQSPPPPYWTP*LHPGPPGYEDARYG Trigger: CCCATATCTGGCATCCTCGTATCCGGGAGGTCCAGGGTGCAATCATGGTGTCCAGTATGGTGGAGGTGGTGATTGGGCTGATGGGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR GCA 90 bp | CCCCATCAGCCCAATCACCACCTCCACCATACTGGACACCATGATTaGACCCTGGACCTCCCGGATACGAGGATGCCAGATATGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: PHQPNHHLHHTGHHD*TLDLPDTRMPDMGG Trigger: ACCTCCCATATCTGGCATCCTCGTATCCGGGAGGTCCAGGGTGCAATCATGGTGTCCAGTATGGTGGAGGTGGTGATTGGGCTGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 90 bp | TCAGGCCTCTTTCCTCTGGGCTCCCTGGCACTGTGTTGTCCAGTATaGAAGCAAGGCACCCGCCAACAAACATCTCTGTGGTCAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SGLFPLGSLALCCPV*KQGTRQQTSLWSAA Trigger: TGCTGCTGACCACAGAGATGTTTGTTGGCGGGTGCCTTGCTTTCATACTGGACAACACAGTGCCAGGGAGCCCAGAGGAAAGAGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 90 bp | TGGTCCTTTTTACCATGCCCATCCCAAAGGGGAAATCGTAGCTCTTaGGACTGGCTGACGTCTCACTGTTGGCGTGGGCTCCAGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: WSFLPCPSQRGNRSS*DWLTSHCWRGLQPS Trigger: GGAAGGCTGGAGCCCACGCCAACAGTGAGACGTCAGCCAGTCTCAAGAGCTACGATTTCCCCTTTGGGATGGGCATGGTAAAAAGGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR CCA 90 bp | AGCCCAATCACCACCTCCACCATACTGGACACCATGATTGCACCCTaGACCTCCCGGATACGAGGATGCCAGATATGGGAGGTGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: SPITTSTILDTMIAP*TSRIRGCQIWEVLR Trigger: TCTCAACACCTCCCATATCTGGCATCCTCGTATCCGGGAGGTCCAGGGTGCAATCATGGTGTCCAGTATGGTGGAGGTGGTGATTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR GCA 90 bp | AATTTGCCAATGGCACCCAGGATTAGCATGATACCTGCACCGTACTaGACGACTCTTCGGCTGCCCACCTTGGTAATCCCTAGGACCCCA | + |
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Preference number: 1 (lower is better) Translates to: NLPMAPRISMIPAPY*TTLRLPTLVIPRTP Trigger: TGGGGTCCTAGGGATTACCAAGGTGGGCAGCCGAAGAGTCGTGCAGTACGGTGCAGGTATCATGCTAATCCTGGGTGCCATTGGCAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 90 bp | CACCCTGGACCTCCCGGATACGAGGATGCCAGATATGGGAGGTGTTaGGAGGCATACTCCAGTTACCGTAGATCTCTTCTTCTGAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: HPGPPGYEDARYGRC*EAYSSYRRSLLLKD Trigger: GTCCTTCAGAAGAAGAGATCTACGGTAACTGGAGTATGCCTCTCAACACCTCCCATATCTGGCATCCTCGTATCCGGGAGGTCCAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 90 bp | GAGAACAAGACTATCAGGAGAATGGAGCAAGCCGAAATACCCCAATaGGAGCCAGCTCGGTCACCAGCAGCTTGGAAAACAGAGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ENKTIRRMEQAEIPQ*EPARSPAAWKTESP Trigger: TGGGCTCTCTGTTTTCCAAGCTGCTGGTGACCGAGCTGGCTCTCATTGGGGTATTTCGGCTTGCTCCATTCTCCTGATAGTCTTGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTTTT | + |
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Preference number: 1 (lower is better) Translates to: WLLGFELWTFGRAVG*SYPLSHLTSPVFIF Trigger: AAAAATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR TCA 90 bp | CAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATaGGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: QFFFFILTSCLGKWK*DRGMQSRSLRVLGD Trigger: GTCTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR-3UTR GCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTACCTGCCTCTGCCTCTaGCTCCACAGAGTGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFTCLCL*LHRVPG Trigger: TCCTGGCACTCTGTGGAGGCAGAGGCAGAGGCAGGT...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR CAA 90 bp | CCTCCCAGGATGGGGTCTGGCAGTGAGGCAAAGAGAGCTGTGAATTaGCCAATGGCACCCAGGATTAGCATGATACCTGCACCGTACTGC | + |
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Preference number: 2 (lower is better) Translates to: PPRMGSGSEAKRAVN*PMAPRISMIPAPYC Trigger: GCAGTACGGTGCAGGTATCATGCTAATCCTGGGTGCCATTGGCAAATTCACAGCTCTCTTTGCCTCACTGCCAGACCCCATCCTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGAGTGCAGAACATTCCTCCCAGGATGGGGTCTGGCAGTGAGGCAAAGAGCAAAGGCACTGGCCTaGAACAACGGCAGCCGGATG | + |
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Preference number: 2 (lower is better) Translates to: QKECRTFLPGWGLAVRQRAKALA*NNGSRM Trigger: CATCCGGCTGCCGTTGTTCCAGGCCAGTGCCTTTGC...TCTTTGCCTCACTGCCAGACCCCATCCTGGGAGGAATGTTCTGCACTCTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGCACTGTGTTGTCCAGTATGAAAGCAAGGCACCCGCCAACAAACATCTCGGAAGCCATAGACTGTaGGGTCTGCGGGCAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: PWHCVVQYESKAPANKHLGSHRL*GLRAAH Trigger: ATGTGCTGCCCGCAGACCCCACAGTCTATGGCTTCC...GAGATGTTTGTTGGCGGGTGCCTTGCTTTCATACTGGACAACACAGTGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGTGGCACTGAACATCCCCAGAACTGCAGCCACAGTCACTGTGGGTAGGGTAGATCTCTTCTTCTaGAGGACACTTCCACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ASVALNIPRTAATVTVGRVDLFF*RTLPPL Trigger: GAGAGGTGGAAGTGTCCTTCAGAAGAAGAGATCTAC...CCTACCCACAGTGACTGTGGCTGCAGTTCTGGGGATGTTCAGTGCCACACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGAGTGCAGAACATTCCTCCCAGGATGGGGTCTGGCAGTGAGGCAAAGAGAACATCCCCAGAACTaGAGCCACAGTCACTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QKECRTFLPGWGLAVRQREHPQN*SHSHCG Trigger: CCCACAGTGACTGTGGCTGCAGTTCTGGGGATGTTC...TCTTTGCCTCACTGCCAGACCCCATCCTGGGAGGAATGTTCTGCACTCTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCTTCAGACCTTGGTACACACAGACCCAGTTTCTATATTGTCTGGAGTGTATGAGGTGGACCCGTTaGCTGTGCCCAGTAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GGFRPWYTQTQFLYCLECMRWTR*LCPVAQ Trigger: CTGGGCTACTGGGCACAGGCAACGGGTCCACCTCAT...ACACTCCAGACAATATAGAAACTGGGTCTGTGTGTACCAAGGTCTGAAGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGAGTGCAGAACATTCCTCCCAGGATGGGGTCTGGCAGTGAGGCAAAGACTAGGACCCCAATGTTaGGACTGGATGAGGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: QKECRTFLPGWGLAVRQRLGPQC*DWMRWT Trigger: GGTCCACCTCATCCAGTCCCAACATTGGGGTCCTAG...TCTTTGCCTCACTGCCAGACCCCATCCTGGGAGGAATGTTCTGCACTCTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCACTGTGTTGTCCAGTATGAAAGCAAGGCACCCGCCAACAAACATCTCATGGTACCAATGAGCTaGCTGACCATGTGCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PWHCVVQYESKAPANKHLMVPMS*LTMCWS Trigger: TGACCAGCACATGGTCAGTCAGCTCATTGGTACCAT...GAGATGTTTGTTGGCGGGTGCCTTGCTTTCATACTGGACAACACAGTGCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | AGATTGGACAGTCCCACAGCAGTGATCATACCAAAAAGAGTGCAGAACATTCCTATGTACTGGAGGGGGTaGTGCTCCAGCCAACCGGGC | + |
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Preference number: 2 (lower is better) Translates to: RLDSPTAVIIPKRVQNIPMYWRG*CSSQPG Trigger: GCCCGGTTGGCTGGAGCACCACCCCCTCCAGTACAT...AGGAATGTTCTGCACTCTTTTTGGTATGATCACTGCTGTGGGACTGTCCAATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR TCA 90 bp | GAACATGGAGAATCCCAATACAAAGAGGTTGCGAGAAGAGTTCATGTCCACAAACACCGATGGACTCAATaGTGCCCGCCAGTGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: EHGESQYKEVARRVHVHKHRWTQ*CPPVWH Trigger: GTGCCACACTGGCGGGCATCATTGAGTCCATCGGTG...TTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR TCA 90 bp | GAACATGGAGAATCCCAATACAAAGAGGTTGCGAGAAGAGTTCATGTCCACAAACCATACTGGACACCATaGTTGCACCCTGGACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: EHGESQYKEVARRVHVHKPYWTP*LHPGPP Trigger: GGGAGGTCCAGGGTGCAATCATGGTGTCCAGTATGG...TTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | TGCGCAGATACTGGGAGAACAAGACTATCAGGAGAATGGAGCAAGCCGAAATACATGCCCACTGTAGTCTaGATGAGAGTGGTGATACCC | + |
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Preference number: 2 (lower is better) Translates to: CADTGRTRLSGEWSKPKYMPTVV*MRVVIP Trigger: GGGTATCACCACTCTCATCCAGACTACAGTGGGCAT...GTATTTCGGCTTGCTCCATTCTCCTGATAGTCTTGTTCTCCCAGTATCTGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | GAACATGGAGAATCCCAATACAAAGAGGTTGCGAGAAGAGTTCATGTCCACAAAGAAAGGCAAAGGCACTaGCCTGGAACAACGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: EHGESQYKEVARRVHVHKERQRH*PGTTAA Trigger: GGCTGCCGTTGTTCCAGGCCAGTGCCTTTGCCTTTC...TTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR CAA 90 bp | GGTAGTGTGAGGCCAAAGAACATGGAGAATCCCAATACAAAGAGGTaGCGAGAAGAGTTCATGTCCACAAACTGCAGATTGGACAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSVRPKNMENPNTKR*REEFMSTNCRLDSP Trigger: GGGACTGTCCAATCTGCAGTTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTCTTTGGCCTCACACTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTCTTCCATGGGAATTTTaGATAGGTAGAGCTGAGATC | + |
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Preference number: 2 (lower is better) Translates to: RAVGCSYPLSHLTSPVFILPWEF*IGRAEI Trigger: GATCTCAGCTCTACCTATTCAAAATTCCCATGGAAG...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGACCTTGGTACACACAGACCCAGTTTCTATATTGTCTGGAGTGTCTTCTCTGTGTTGTCCAGTATaGAAGCAAGGCACCCGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LQTLVHTDPVSILSGVSSLCCPV*KQGTRQ Trigger: TTGGCGGGTGCCTTGCTTTCATACTGGACAACACAG...AGAAGACACTCCAGACAATATAGAAACTGGGTCTGTGTGTACCAAGGTCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGTCCTGTTACACACAGTaGCTCCTTTCATTGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GSGNETEECSPGLLEYLESCYTQ*LLSLRW Trigger: CCACCTCAATGAAAGGAGGCACTGTGTGTAACAGGA...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR-3UTR CCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTCTCTGTAGACCAGGATaGCCTCAAACTCAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: DLISGGCESPCGCWDLNSLCRPG*PQTQKS Trigger: GGATTTCTGAGTTTGAGGCCATCCTGGTCTACAGAG...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR-3UTR CCA 90 bp | GAACATGGAGAATCCCAATACAAAGAGGTTGCGAGAAGAGTTCATGTCCACAAAAGGCCAGGATTGACTTaGCTGGAACCAGAAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: EHGESQYKEVARRVHVHKRPGLT*LEPERQ Trigger: TTGCCTTTCTGGTTCCAGCCAAGTCAATCCTGGCCT...TTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGACCTTGGTACACACAGACCCAGTTTCTATATTGTCTGGAGTGTCTTCTACGGTCACCAGCAGCTTaGAAAACAGAGAGCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: FRPWYTQTQFLYCLECLLRSPAA*KTESPI Trigger: TATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGACCG...TAGAAGACACTCCAGACAATATAGAAACTGGGTCTGTGTGTACCAAGGTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTTTTATTTCCCCTATGTaGAGGGAGAACACTTATCTA | + |
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Preference number: 2 (lower is better) Translates to: DLISGGCESPCGCWDLNSFISPM*RENTYL Trigger: TAGATAAGTGTTCTCCCTTCACATAGGGGAAATAAA...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAACTTGGAGACTTGGGCTaGCATGGAAACAGAGTCACA | + |
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Preference number: 2 (lower is better) Translates to: RGSSVLLLYIDFMFREVELGDLG*HGNRVT Trigger: TGTGACTCTGTTTCCATGTCAGCCCAAGTCTCCAAG...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR CCA 72 bp | CTCGGGCATCAGTTCGAGCCTGGAAGCCATAGACTGTaGGGTCTGCGGGCAGCACATCTGTCAGGGTCAACA | + |
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Preference number: 3 (lower is better) Translates to: LGHQFEPGSHRL*GLRAAHLSGST Trigger: TGTTGACCCTGACAGATGTGCTGCCCGCAGACCCCACAGTCTATGGCTTCCAGGCTCGAACTGATGCCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 72 bp | CGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RVVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR TCA 72 bp | CATCCCAAAGGGGAAATCGTAGCTCTTGAGACTGGCTaGCGTCTCACTGTTGGCGTGGGCTCCAGCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: HPKGEIVALETG*RLTVGVGSSLP Trigger: TGGAAGGCTGGAGCCCACGCCAACAGTGAGACGTCAGCCAGTCTCAAGAGCTACGATTTCCCCTTTGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR GCA 72 bp | ATCAGTTCGAGCCTGGAAGCCATAGACTGTGGGGTCTaGGGGCAGCACATCTGTCAGGGTCAACACGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ISSSLEAIDCGV*GQHICQGQHVA Trigger: TGCTACGTGTTGACCCTGACAGATGTGCTGCCCGCAGACCCCACAGTCTATGGCTTCCAGGCTCGAACTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR CCA 72 bp | GCCTGGAACAACGGCAGCCGGATGCCCACTGTAGTCTaGATGAGAGTGGTGATACCCACACAGGTGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: AWNNGSRMPTVV*MRVVIPTQVKM Trigger: CATCTTCACCTGTGTGGGTATCACCACTCTCATCCAGACTACAGTGGGCATCCGGCTGCCGTTGTTCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR CCA 72 bp | ACCACCTCCACCATACTGGACACCATGATTGCACCCTaGACCTCCCGGATACGAGGATGCCAGATATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TTSTILDTMIAP*TSRIRGCQIWE Trigger: CTCCCATATCTGGCATCCTCGTATCCGGGAGGTCCAGGGTGCAATCATGGTGTCCAGTATGGTGGAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 72 bp | TTACCATGCCCATCCCAAAGGGGAAATCGTAGCTCTTaGGACTGGCTGACGTCTCACTGTTGGCGTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LPCPSQRGNRSS*DWLTSHCWRGL Trigger: GAGCCCACGCCAACAGTGAGACGTCAGCCAGTCTCAAGAGCTACGATTTCCCCTTTGGGATGGGCATGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR GCA 72 bp | ACCATGATTGCACCCTGGACCTCCCGGATACGAGGATaGCAGATATGGGAGGTGTTGAGAGGCATACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TMIAPWTSRIRG*QIWEVLRGILQ Trigger: CTGGAGTATGCCTCTCAACACCTCCCATATCTGGCATCCTCGTATCCGGGAGGTCCAGGGTGCAATCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR GCA 72 bp | ATGGCACCCAGGATTAGCATGATACCTGCACCGTACTaGACGACTCTTCGGCTGCCCACCTTGGTAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: MAPRISMIPAPY*TTLRLPTLVIP Trigger: AGGGATTACCAAGGTGGGCAGCCGAAGAGTCGTGCAGTACGGTGCAGGTATCATGCTAATCCTGGGTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGATAGCCATGATGTCCCCTCGGGCATCAGTTCGAGCCTGGAAGCCATAGACTCTCCAAGGCCAGGATaGACTTGGCTGGAACCAGAA | + |
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Preference number: 3 (lower is better) Translates to: RDSHDVPSGISSSLEAIDSPRPG*TWLEPE Trigger: TTCTGGTTCCAGCCAAGTCAATCCTGGCCTTGGAGA...GTCTATGGCTTCCAGGCTCGAACTGATGCCCGAGGGGACATCATGGCTATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCACTGTGTTGTCCAGTATGAAAGCAAGGCACCCGCCAACAAACATCTCTCGGTCACCAGCAGCTaGGAAAACAGAGAGCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: PWHCVVQYESKAPANKHLSVTSS*ENREPN Trigger: ATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGACCGA...GAGATGTTTGTTGGCGGGTGCCTTGCTTTCATACTGGACAACACAGTGCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCACTGTGTTGTCCAGTATGAAAGCAAGGCACCCGCCAACAAACATCTCAACAGGAAGGTGAGGTaGCGCAGATACTGGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: PWHCVVQYESKAPANKHLNRKVR*RRYWEN Trigger: GTTCTCCCAGTATCTGCGCAACCTCACCTTCCTGTT...GAGATGTTTGTTGGCGGGTGCCTTGCTTTCATACTGGACAACACAGTGCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 72 bp | CCTCCCGGATACGAGGATGCCAGATATGGGAGGTGTTaGGAGGCATACTCCAGTTACCGTAGATCTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: PPGYEDARYGRC*EAYSSYRRSLL Trigger: AAGAAGAGATCTACGGTAACTGGAGTATGCCTCTCAACACCTCCCATATCTGGCATCCTCGTATCCGGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| 3UTR TCA 72 bp | ACTATCAGGAGAATGGAGCAAGCCGAAATACCCCAATaGGAGCCAGCTCGGTCACCAGCAGCTTGGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: TIRRMEQAEIPQ*EPARSPAAWKT Trigger: TGTTTTCCAAGCTGCTGGTGACCGAGCTGGCTCTCATTGGGGTATTTCGGCTTGCTCCATTCTCCTGATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| 3UTR TCA 72 bp | GACCCTTGCCCCATCGGTAAACAGGTAACAGGAAGGTaGGGTTGCGCAGATACTGGGAGAACAAGACTATCA | + |
|
Preference number: 3 (lower is better) Translates to: DPCPIGKQVTGR*GCADTGRTRLS Trigger: TGATAGTCTTGTTCTCCCAGTATCTGCGCAACCTCACCTTCCTGTTACCTGTTTACCGATGGGGCAAGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| 3UTR GCA 72 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLISGGCESPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| 3UTR CCA 72 bp | TGCGCAGATACTGGGAGAACAAGACTATCAGGAGAATaGAGCAAGCCGAAATACCCCAATGAGAGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CADTGRTRLSGE*SKPKYPNESQL Trigger: GAGCTGGCTCTCATTGGGGTATTTCGGCTTGCTCCATTCTCCTGATAGTCTTGTTCTCCCAGTATCTGCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTCTGTATATTTAATGTaGAAGGTCAAGCCCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYSVYLM*KVKPRP Trigger: AGGCCTGGGCTTGACCTTCAACATTAAATATACAGA...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTTAAAATACATGGCATaGGAATTCAGGGGTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYLKYMA*EFRGVF Trigger: AAACACACCCCTGAATTCCAATGCCATGTATTTTAA...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| 3UTR TCA 72 bp | TTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATaGGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FFILTSCLGKWK*DRGMQSRSLRV Trigger: TACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR GCA 90 bp | GTCACCAGCAGCTTGGAAAACAGAGAGCCCAATAAGGGAGACAGTGGGGGTGACCTCCGTGGGCAAAGGTaGCTGCCGGTCCCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTSSLENREPNKGDSGGDLRGQR*LPVPGG Trigger: TCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAG...GTCACCCCCACTGTCTCCCTTATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCACTGAACATCCCCAGAACTGCAGCCACAGTCACTGTGGGTAGGCCCCACGGAAGCCCAGCAGGATaGACAGGTACCATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VALNIPRTAATVTVGRPHGSPAG*TGTMVA Trigger: TGCCACCATGGTACCTGTGCATCCTGCTGGGCTTCC...GTGGGGCCTACCCACAGTGACTGTGGCTGCAGTTCTGGGGATGTTCAGTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTACTGGAGGGGGTGGTaGTCCAGCCAACCGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFYWRGW*SSQPGT Trigger: TGTGCCCGGTTGGCTGGAGCACCACCCCCTCCAGTA...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCAGCAGCTTGGAAAACAGAGAGCCCAATAAGGGAGACAGTGGGGGTGACCCTGCCGGTCCCTGGTaGAAGTCCCTGCTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTSSLENREPNKGDSGGDPAGPW*KSLLLW Trigger: CCAAAGCAGCAGGGACTTCCACCAGGGACCGGCAGG...GTCACCCCCACTGTCTCCCTTATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR CCA 90 bp | GTCACCAGCAGCTTGGAAAACAGAGAGCCCAATAAGGGAGACAGTGGGGGTGACGTGCCTGCCGGTCCCTaGTGGAAGTCCCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSSLENREPNKGDSGGDVPAGP*WKSLLL Trigger: AAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCAC...GTCACCCCCACTGTCTCCCTTATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTGACCTCATGCTGCTTTaGGCTCCCGGGGTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCSYPLSHLTSPVFIDLMLL*APGVLR Trigger: CCGGAGGACCCCGGGAGCCCAAAGCAGCATGAGGTC...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGCATAGTAATCACCGATGGACTCAATGATGCCCGCCAGTGTGGCACTCAAACTTGGGCTCCGTaGGCAAAGGTGCCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGIVITDGLNDARQCGTQTWAP*AKVPAG Trigger: ACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTG...AGTGCCACACTGGCGGGCATCATTGAGTCCATCGGTGATTACTATGCCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGGAGGCCCAATGTAGCTaGGCAGGGCCCCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGNETEECSPGLLEYLEEAQCS*AGPQAA Trigger: GGCTGCCTGGGGCCCTGCTCAGCTACATTGGGCCTC...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTGATGGGGTCTGGCAGTaGGGCAAAGAGAGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFDGVWQ*GKESCE Trigger: TTCACAGCTCTCTTTGCCTCACTGCCAGACCCCATC...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTACCATGATTGCACCCTaGACCTCCCGGATACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFTMIAP*TSRIRG Trigger: TCCTCGTATCCGGGAGGTCCAGGGTGCAATCATGGT...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATATGTACTGGAGGGGGTaGTGCTCCAGCCAACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYMYWRG*CSSQPG Trigger: GCCCGGTTGGCTGGAGCACCACCCCCTCCAGTACAT...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATGTGCCTGCCGGTCCCTaGTGGAAGTCCCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYVPAGP*WKSLLN Trigger: ATTCAGCAGGGACTTCCACCAGGGACCGGCAGGCAC...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATCAAACTTGGGCTCCGTaGGCAAAGGTGCCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYQTWAP*AKVPAG Trigger: ACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTG...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATGCAAAGGCACTGGCCTaGAACAACGGCAGCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYAKALA*NNGSRM Trigger: CATCCGGCTGCCGTTGTTCCAGGCCAGTGCCTTTGC...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| 3UTR CAA 72 bp | TCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGGCESPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATGCCGAAATACCCCAATaGGAGCCAGCTCGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYAEIPQ*EPARSP Trigger: TGGTGACCGAGCTGGCTCTCATTGGGGTATTTCGGC...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTAGGCAAAGAGAGCTGTaGATTTGCCAATGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFRQREL*ICQWHP Trigger: TGGGTGCCATTGGCAAATTCACAGCTCTCTTTGCCT...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTCGGTCACCAGCAGCTTaGAAAACAGAGAGCCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFRSPAA*KTESPI Trigger: TATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGACCG...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| 3UTR CAA 72 bp | AATACCCCAATGAGAGCCAGCTCGGTCACCAGCAGCTaGGAAAACAGAGAGCCCAATAAGGGAGACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTPMRASSVTSS*ENREPNKGDSG Trigger: CCCACTGTCTCCCTTATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGACCGAGCTGGCTCTCATTGGGGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR TCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTCACCGATGGACTCAATaGTGCCCGCCAGTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLISGGCESPCGCWDLNSHRWTQ*CPPVWH Trigger: GTGCCACACTGGCGGGCATCATTGAGTCCATCGGTG...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR GCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTATGAGGTGGACCCGTTaGCTGTGCCCAGTAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLISGGCESPCGCWDLNSMRWTR*LCPVAQ Trigger: CTGGGCTACTGGGCACAGGCAACGGGTCCACCTCAT...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATCTCCAAGGCCAGGATTaGCTTGGCTGGAACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYLQGQD*LGWNQK Trigger: TTTCTGGTTCCAGCCAAGTCAATCCTGGCCTTGGAG...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTCTGTGTTGTCCAGTATaGAAGCAAGGCACCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCSYPLSHLTSPVFILCCPV*KQGTRQ Trigger: TTGGCGGGTGCCTTGCTTTCATACTGGACAACACAG...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCAGCAGCTTGGAAAACAGAGAGCCCAATAAGGGAGACAGTGGGGGTGACGATGCACAGGTACCATaGTGGCACATCCTCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSSLENREPNKGDSGGDDAQVP*WHILNL Trigger: AAGATTGAGGATGTGCCACCATGGTACCTGTGCATC...GTCACCCCCACTGTCTCCCTTATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGGAAAGGCAAAGGCACTaGCCTGGAACAACGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGNETEECSPGLLEYLEERQRH*PGTTAA Trigger: GGCTGCCGTTGTTCCAGGCCAGTGCCTTTGCCTTTC...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGGGAAGCCATAGACTGTaGGGTCTGCGGGCAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGNETEECSPGLLEYLEGSHRL*GLRAAH Trigger: ATGTGCTGCCCGCAGACCCCACAGTCTATGGCTTCC...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTGTTGATGGCATGTACTaGAGGGGGTGGTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLISGGCESPCGCWDLNSVDGMY*RGWCSS Trigger: GCTGGAGCACCACCCCCTCCAGTACATGCCATCAAC...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTTCCTCTGGGCTCCCTaGCACTGTGTTGTCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYFLWAP*HCVVQY Trigger: ATACTGGACAACACAGTGCCAGGGAGCCCAGAGGAA...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GAACATGGAGAATCCCAATACAAAGAGGTTGCGAGAAGAGTTCATGTCCACAAAAAGTCCCTGCTGCTTTaGGCTCCCGGGGTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EHGESQYKEVARRVHVHKKSLLL*APGVLR Trigger: CCGGAGGACCCCGGGAGCCCAAAGCAGCAGGGACTT...TTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR TCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTAATGTTGGGACTGGATaGGGTGGACCCGTTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLISGGCESPCGCWDLNSNVGTG*GGPVAC Trigger: ACAGGCAACGGGTCCACCTCATCCAGTCCCAACATT...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGGAACATCCCCAGAACTaGAGCCACAGTCACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGNETEECSPGLLEYLEEHPQN*SHSHCG Trigger: CCCACAGTGACTGTGGCTGCAGTTCTGGGGATGTTC...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTAGGCCAGGATTGACTTaGCTGGAACCAGAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCSYPLSHLTSPVFIRPGLT*LEPERQ Trigger: TTGCCTTTCTGGTTCCAGCCAAGTCAATCCTGGCCT...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTACAGTCCCACAGCAGTaGTCATACCAAAAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCSYPLSHLTSPVFITVPQQ*SYQKEC Trigger: GCACTCTTTTTGGTATGATCACTGCTGTGGGACTGT...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| 3UTR CAA 72 bp | GAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTaGGAGACTTGGGCTGACATGGAAACAGAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETEECSPGLLEY*ETWADMETESQ Trigger: CTGTGACTCTGTTTCCATGTCAGCCCAAGTCTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTCTGTCTCCTATGTAGTTTTCTTTTCCTGTTACACACAGTGCCTCCTTGCTCTTGAGACTGGCTaGCGTCTCACTGTTGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSVSYVVFFSCYTQCLLALETG*RLTVGV Trigger: CACGCCAACAGTGAGACGTCAGCCAGTCTCAAGAGC...AAGGAGGCACTGTGTGTAACAGGAAAAGAAAACTACATAGGAGACAGAAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTCAACAAACATCTCTGTaGTCAGCAGCACAGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAVGCSYPLSHLTSPVFIQQTSL*SAAQLG Trigger: TCCTAACTGTGCTGCTGACCACAGAGATGTTTGTTG...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAACTCCGTGGGCAAAGGTaGCTGCCGGTCCCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVELRGQR*LPVPGG Trigger: TCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAG...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATCCAATACAAAGAGGTTaGGAGAAGAGTTCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYPIQRG*EKSSCP Trigger: TGGACATGAACTCTTCTCGCAACCTCTTTGTATTGG...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR GCA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTTTCATGTCCACAAACTaGAGATTGGACAGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DLISGGCESPCGCWDLNSFMSTN*RLDSPT Trigger: TGTGGGACTGTCCAATCTGCAGTTTGTGGACATGAA...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGTGTGTTGATAGCACCTaGGTTGGAATCCAGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGNETEECSPGLLEYLECVDST*VGIQVV Trigger: AACTACCTGGATTCCAACCCAGGTGCTATCAACACA...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR TCA 90 bp | CTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGAGACAGAGGAATGCACCATACTGGACACCATaGTTGCACCCTGGACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLYIDFMFREVEMRQRNAPYWTP*LHPGPP Trigger: GGGAGGTCCAGGGTGCAATCATGGTGTCCAGTATGG...TGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR TCA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTCTAGAACTGGAGGCTaGTTTTGTGTCTTTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYSRTGG*FCVFLE Trigger: TTCTAAAAAGACACAAAATCAGCCTCCAGTTCTAGA...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR GCA 90 bp | CTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGAGACAGAGGAATGCAGGAAGCCCAGCAGGATaGACAGGTACCATGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLYIDFMFREVEMRQRNAGSPAG*TGTMVA Trigger: TGCCACCATGGTACCTGTGCATCCTGCTGGGCTTCC...TGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR GCA 90 bp | CTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGAGACAGAGGAATGCAACTGGACACCATGATTaGACCCTGGACCTCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLYIDFMFREVEMRQRNATGHHD*TLDLPD Trigger: ATCCGGGAGGTCCAGGGTGCAATCATGGTGTCCAGT...TGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTTCTGTCTCCTATGTAGTTTTCTTTTCCTGTTACACACAGTGCCTCCTTGATGCACAGGTACCATaGTGGCACATCCTCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSVSYVVFFSCYTQCLLDAQVP*WHILNL Trigger: AAGATTGAGGATGTGCCACCATGGTACCTGTGCATC...AAGGAGGCACTGTGTGTAACAGGAAAAGAAAACTACATAGGAGACAGAAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CCA 90 bp | CTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGAGACAGAGGAATGCACTAGGACCCCAATGTTaGGACTGGATGAGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLYIDFMFREVEMRQRNALGPQC*DWMRWT Trigger: GGTCCACCTCATCCAGTCCCAACATTGGGGTCCTAG...TGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAGTCTCACTGTTGGCGTaGGCTCCAGCCTTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVEVSLLA*APAFHC Trigger: ACAGTGGAAGGCTGGAGCCCACGCCAACAGTGAGAC...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| 3UTR CAA 72 bp | AGGCCAAAGAACATGGAGAATCCCAATACAAAGAGGTaGCGAGAAGAGTTCATGTCCACAAACTGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RPKNMENPNTKR*REEFMSTNCRL Trigger: CAATCTGCAGTTTGTGGACATGAACTCTTCTCGCAACCTCTTTGTATTGGGATTCTCCATGTTCTTTGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| CDS-3UTR CCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAACATTCCTCCCAGGATaGGGTCTGGCAGTGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVETFLPG*GLAVRQ Trigger: TTGCCTCACTGCCAGACCCCATCCTGGGAGGAATGT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGGTACCAATGAGCTaGCTGACCATGTGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVEMVPMS*LTMCWS Trigger: TGACCAGCACATGGTCAGTCAGCTCATTGGTACCAT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAACAACATGTCAAACTTaGGCTCCGTGGGCAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVETTCQT*APWAKV Trigger: CACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGCCCACTGTAGTCTaGATGAGAGTGGTGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVEMPTVV*MRVVIP Trigger: GGGTATCACCACTCTCATCCAGACTACAGTGGGCAT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAGTAGATCTCTTCTTCTaGAGGACACTTCCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVEVDLFF*RTLPPL Trigger: GAGAGGTGGAAGTGTCCTTCAGAAGAAGAGATCTAC...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAAGCACAGTTAGGATCTaGTCCACTTCAGGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVESTVRI*STSGMP Trigger: AGGCATTCCTGAAGTGGATCAGATCCTAACTGTGCT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CCA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAAGGTTGCGCAGATACTaGGAGAACAAGACTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSSVLLLYIDFMFREVERLRRY*ENKTIR Trigger: CCTGATAGTCTTGTTCTCCCAGTATCTGCGCAACCT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR GCA 90 bp | CTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGAGACAGAGGAATGCATCATACCAAAAAGAGTaGAGAACATTCCTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLYIDFMFREVEMRQRNASYQKE*RTFLPG Trigger: TCCTGGGAGGAATGTTCTGCACTCTTTTTGGTATGA...TGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS TCA 90 bp | CTCCGTGGGCAAAGGTGCCTGCCGGTCCCTGGTGGAAGTCCCTGCTaGATCCACGACCTCATGCTGCTTTGGGCTCCCGGGGTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRGQRCLPVPGGSPC*IHDLMLLWAPGVLR Trigger: CCGGAGGACCCCGGGAGCCCAAAGCAGCATGAGGTCGTGGATTCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS CCA 90 bp | ACATGTCAAACTTGGGCTCCGTGGGCAAAGGTGCCTGCCGGTCCCTaGTGGAAGTCCCTGCTGCTTTGGGCTCCCGGGGTCCTCCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TCQTWAPWAKVPAGP*WKSLLLWAPGVLRS Trigger: ACTCCGGAGGACCCCGGGAGCCCAAAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGCATAGTAATCACCGATGGACTCAATGATGCCCGCCAGTGTGGCACTGAAGTCCCTGCTGCTTaGGGCTCCCGGGGTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTGIVITDGLNDARQCGTEVPAA*GSRGPP Trigger: CGGAGGACCCCGGGAGCCCAAAGCAGCAGGGACTTC...AGTGCCACACTGGCGGGCATCATTGAGTCCATCGGTGATTACTATGCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| CDS GCA 90 bp | ATCTTGTACAACATGTCAAACTTGGGCTCCGTGGGCAAAGGTGCCTaGCGGTCCCTGGTGGAAGTCCCTGCTGCTTTGGGCTCCCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILYNMSNLGSVGKGA*RSLVEVPAALGSRG Trigger: ACCCCGGGAGCCCAAAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS CCA 90 bp | ACATGTCAAACTTGGGCTCCGTGGGCAAAGGTGCCTGCCGGTCCCTaGTGGAAGTCCCTGCTGAATCCACGACCTCATGCTGCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCQTWAPWAKVPAGP*WKSLLNPRPHAALG Trigger: GCCCAAAGCAGCATGAGGTCGTGGATTCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS GCA 90 bp | CTCAATCTTGTACAACATGTCAAACTTGGGCTCCGTGGGCAAAGGTaGCTGCCGGTCCCTGGTGGAAGTCCCTGCTGCTTTGGGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LNLVQHVKLGLRGQR*LPVPGGSPCCFGLP Trigger: CGGGAGCCCAAAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| CDS CCA 90 bp | GGTACCATGGTGGCACATCCTCAATCTTGTACAACATGTCAAACTTaGGCTCCGTGGGCAAAGGTGCCTGCCGGTCCCTGGTGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTMVAHPQSCTTCQT*APWAKVPAGPWWKS Trigger: GGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCACCATGGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATGCTGACGTCTCACTGTaGGCGTGGGCTCCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSSRVLLPTEPSHQPCFYADVSL*AWAPAF Trigger: GAAGGCTGGAGCCCACGCCAACAGTGAGACGTCAGC...ATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTACAACATGTCAAACTaGGGCTCCGTGGGCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFYNMSN*GSVGKG Trigger: ACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTA...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTGTGAAAATTCCCCTGTaGATGGCATGTACTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKSSRVLLPTEPSHQPCFVKIPL*MACTGG Trigger: CCCTCCAGTACATGCCATCAACAGGGGAATTTTCAC...AAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | GGCACAGGCATAGTAATCACCGATGGACTCAATGATGCCCGCCAGTGTGGCACTTACAACATGTCAAACTaGGGCTCCGTGGGCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGIVITDGLNDARQCGTYNMSN*GSVGKG Trigger: ACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTA...AGTGCCACACTGGCGGGCATCATTGAGTCCATCGGTGATTACTATGCCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| CDS CCA 90 bp | GCACGTCAGGTAATGCTGGAAGCCCAGCAGGATGCACAGGTACCATaGTGGCACATCCTCAATCTTGTACAACATGTCAAACTTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARQVMLEAQQDAQVP*WHILNLVQHVKLGL Trigger: GAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCACCATGGTACCTGTGCATCCTGCTGGGCTTCCAGCATTACCTGACGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | AGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTTTATTAAGAGAGCTGTGAATTaGCCAATGGCACCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RAVGCSYPLSHLTSPVFIKRAVN*PMAPRI Trigger: AATCCTGGGTGCCATTGGCAAATTCACAGCTCTCTT...AATAAAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGAAATGAGACAGAGGAATGCAGTCCAGGTCTCTTAGAGTACTTGGAGTCAGGAATGCCTGTGTaGATAGCACCTGGGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSGNETEECSPGLLEYLESGMPV*IAPGLE Trigger: TTCCAACCCAGGTGCTATCAACACAGGCATTCCTGA...CTCCAAGTACTCTAAGAGACCTGGACTGCATTCCTCTGTCTCATTTCCACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | CTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAATGAGACAGAGGAATGCAGATGAGGTGGACCCGTaGCCTGTGCCCAGTAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLYIDFMFREVEMRQRNADEVDP*PVPSSP Trigger: TGGGCTACTGGGCACAGGCAACGGGTCCACCTCATC...TGCATTCCTCTGTCTCATTTCCACTTCCCTAAACATGAAGTCAATATAAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | AGGTCTTCTGTCTCCTATGTAGTTTTCTTTTCCTGTTACACACAGTGCCTCCTTTCTCCAAGGCCAGGATaGACTTGGCTGGAACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSSVSYVVFFSCYTQCLLSPRPG*TWLEPE Trigger: TTCTGGTTCCAGCCAAGTCAATCCTGGCCTTGGAGA...AAGGAGGCACTGTGTGTAACAGGAAAAGAAAACTACATAGGAGACAGAAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | GATCTCATTTCGGGTGGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCTGACCCAGTTTCTATATaGTCTGGAGTGTCTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DLISGGCESPCGCWDLNSDPVSI*SGVSSR Trigger: TCTAGAAGACACTCCAGACAATATAGAAACTGGGTC...AGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCACCCGAAATGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | CTTCAGACCTTGGTACACACAGACCCAGTTTCTATATTGTCTGGAGTGTCTTCTGGCACATCCTCAATCTaGTACAACATGTCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQTLVHTDPVSILSGVSSGTSSI*YNMSNL Trigger: CAAGTTTGACATGTTGTACAAGATTGAGGATGTGCC...AGAAGACACTCCAGACAATATAGAAACTGGGTCTGTGTGTACCAAGGTCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTTCTGTCTCCTATGTAGTTTTCTTTTCCTGTTACACACAGTGCCTCCTTGGCACATCCTCAATCTaGTACAACATGTCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSSVSYVVFFSCYTQCLLGTSSI*YNMSNL Trigger: CAAGTTTGACATGTTGTACAAGATTGAGGATGTGCC...AAGGAGGCACTGTGTGTAACAGGAAAAGAAAACTACATAGGAGACAGAAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAATCGGTCACCAGCAGCTaGGAAAACAGAGAGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RGSSVLLLYIDFMFREVESVTSS*ENREPN Trigger: ATTGGGCTCTCTGTTTTCCAAGCTGCTGGTGACCGA...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAAAACAGGAAGGTGAGGTaGCGCAGATACTGGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSVLLLYIDFMFREVENRKVR*RRYWEN Trigger: GTTCTCCCAGTATCTGCGCAACCTCACCTTCCTGTT...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
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| CDS-3UTR CAA 90 bp | AGAGGATCTTCAGTTCTTCTTCTTTATATTGACTTCATGTTTAGGGAAGTGGAACTCCCTGGCACTGTGTaGTCCAGTATGAAAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGSSVLLLYIDFMFREVELPGTV*SSMKAR Trigger: CCTTGCTTTCATACTGGACAACACAGTGCCAGGGAG...TTCCACTTCCCTAAACATGAAGTCAATATAAAGAAGAAGAACTGAAGATCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS GCA 72 bp | GGGCAAAGGTGCCTGCCGGTCCCTGGTGGAAGTCCCTaGTGCTTTGGGCTCCCGGGGTCCTCCGGAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GQRCLPVPGGSP*CFGLPGSSGVF Trigger: GAAAACTCCGGAGGACCCCGGGAGCCCAAAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS TCA 72 bp | CAAAGGTGCCTGCCGGTCCCTGGTGGAAGTCCCTGCTaGATCCACGACCTCATGCTGCTTTGGGCTCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRCLPVPGGSPC*IHDLMLLWAPG Trigger: CCCGGGAGCCCAAAGCAGCATGAGGTCGTGGATTCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS GCA 72 bp | TCCCTGGTGGAAGTCCCTGCTGAATCCACGACCTCATaGTGCTTTGGGCTCCCGGGGTCCTCCGGAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLVEVPAESTTS*CFGLPGSSGVF Trigger: GAAAACTCCGGAGGACCCCGGGAGCCCAAAGCAGCATGAGGTCGTGGATTCAGCAGGGACTTCCACCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025212.8 |
||
| CDS GCA 72 bp | AACATGTCAAACTTGGGCTCCGTGGGCAAAGGTGCCTaGCGGTCCCTGGTGGAAGTCCCTGCTGCTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NMSNLGSVGKGA*RSLVEVPAALG Trigger: GCCCAAAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS GCA 72 bp | GTACAACATGTCAAACTTGGGCTCCGTGGGCAAAGGTaGCTGCCGGTCCCTGGTGGAAGTCCCTGCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VQHVKLGLRGQR*LPVPGGSPCCF Trigger: AAAGCAGCAGGGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237305.2 |
||
| CDS CCA 72 bp | CCTCAATCTTGTACAACATGTCAAACTTGGGCTCCGTaGGCAAAGGTGCCTGCCGGTCCCTGGTGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PQSCTTCQTWAP*AKVPAGPWWKS Trigger: GGACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
||
| CDS CCA 72 bp | GTGGCACATCCTCAATCTTGTACAACATGTCAAACTTaGGCTCCGTGGGCAAAGGTGCCTGCCGGTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VAHPQSCTTCQT*APWAKVPAGPW Trigger: CCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
||
| CDS CAA 72 bp | GGTGGCACATCCTCAATCTTGTACAACATGTCAAACTaGGGCTCCGTGGGCAAAGGTGCCTGCCGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGTSSILYNMSN*GSVGKGACRSL Trigger: CAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
||
| CDS CAA 90 bp | AGGTACCATGGTGGCACATCCTCAATCTTGTACAACATGTCAAACTaGGGCTCCGTGGGCAAAGGTGCCTGCCGGTCCCTGGTGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RYHGGTSSILYNMSN*GSVGKGACRSLVEV Trigger: GACTTCCACCAGGGACCGGCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCACCATGGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
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| CDS CAA 90 bp | AAGCCCAGCAGGATGCACAGGTACCATGGTGGCACATCCTCAATCTaGTACAACATGTCAAACTTGGGCTCCGTGGGCAAAGGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KPSRMHRYHGGTSSI*YNMSNLGSVGKGAC Trigger: GCAGGCACCTTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCACCATGGTACCTGTGCATCCTGCTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
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| CDS CAA 72 bp | AGGATGCACAGGTACCATGGTGGCACATCCTCAATCTaGTACAACATGTCAAACTTGGGCTCCGTGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RMHRYHGGTSSI*YNMSNLGSVGK Trigger: TTTGCCCACGGAGCCCAAGTTTGACATGTTGTACAAGATTGAGGATGTGCCACCATGGTACCTGTGCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
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| CDS CCA 72 bp | GTAATGCTGGAAGCCCAGCAGGATGCACAGGTACCATaGTGGCACATCCTCAATCTTGTACAACATGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VMLEAQQDAQVP*WHILNLVQHVK Trigger: TTTGACATGTTGTACAAGATTGAGGATGTGCCACCATGGTACCTGTGCATCCTGCTGGGCTTCCAGCATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025212.8 ENSMUST00000237305.2 |
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