Pregenerated sensors for SLC22A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024650Ensembl transcript IDs: ENSMUST00000010250.4
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAATGTCCTGGAGGTGGAAGGGACAGGAGCTGGAGGAGTGACCACTaGGCTGGAAGATGGCTGAGGAAGAGCTCATTCTGCTTAAGAAGC | + |
Preference number: 1 (lower is better) Translates to: QCPGGGRDRSWRSDH*AGRWLRKSSFCLRS Trigger: GCTTCTTAAGCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTGTCCCTTCCACCTCCAGGACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 90 bp | TTCTTTGCAATGTCCTGGAGGTGGAAGGGACAGGAGCTGGAGGAGTaGCCACTGAGCTGGAAGATGGCTGAGGAAGAGCTCATTCTGCTT | + |
Preference number: 1 (lower is better) Translates to: FFAMSWRWKGQELEE*PLSWKMAEEELILL Trigger: AAGCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTGTCCCTTCCACCTCCAGGACATTGCAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR GCA 90 bp | TGGGAAGTCGGGGCAGAGACTGTAGCAGAGGCTGTGGAAGAACACTaGTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACC | + |
Preference number: 1 (lower is better) Translates to: WEVGAETVAEAVEEH*SLACSACFVIANRT Trigger: GGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTACAGTCTCTGCCCCGACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 90 bp | GTTCCTAGTAGGTCTATTGAAGTGACCTTTGGGGAGGCATTTCTCTaGATGGCAGGCTCCGCATTTAGATGGCCCAGTCCCTCCACTCAC | + |
Preference number: 1 (lower is better) Translates to: VPSRSIEVTFGEAFL*MAGSAFRWPSPSTH Trigger: GTGAGTGGAGGGACTGGGCCATCTAAATGCGGAGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGACCTACTAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 90 bp | TTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTTaGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGC | + |
Preference number: 1 (lower is better) Translates to: FSDLSIAAHAWNACI*EVEAEGSRFKVTLS Trigger: GCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR GCA 90 bp | CACGCCTATAAGCATCTATCTCTTTTGCTGCTAGAAGTTTCTGTCTaGTCTTACAGCAGGAGAAGAGCCCAGGGCAGAGCCTCTGACTGC | + |
Preference number: 1 (lower is better) Translates to: HAYKHLSLLLLEVSV*SYSRRRAQGRASDC Trigger: GCAGTCAGAGGCTCTGCCCTGGGCTCTTCTCCTGCTGTAAGAGCAGACAGAAACTTCTAGCAGCAAAAGAGATAGATGCTTATAGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 90 bp | CTGTTAAATACTGTCTGGTCCTCGTCTCACTCCTCCACCAGCCCCTaGACCTACAGGAAGCAGAGCAACGTTGAAAACCCATCAAACACA | + |
Preference number: 1 (lower is better) Translates to: LLNTVWSSSHSSTSP*TYRKQSNVENPSNT Trigger: TGTGTTTGATGGGTTTTCAACGTTGCTCTGCTTCCTGTAGGTTCAGGGGCTGGTGGAGGAGTGAGACGAGGACCAGACAGTATTTAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR GCA 90 bp | AAGGGTACTATTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATaGTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGT | + |
Preference number: 1 (lower is better) Translates to: KGTIFRFEHCGTRLE*LHLGGGGRRLKVQS Trigger: ACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 90 bp | CATCTTGGTCAAGTCACAGAAGATGCTACAAGGTCCCTGACACACTaGCTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCA | + |
Preference number: 1 (lower is better) Translates to: HLGQVTEDATRSLTH*LKRDQDRNQRVLFS Trigger: TGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAGTCAGTGTGTCAGGGACCTTGTAGCATCTTCTGTGACTTGACCAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 90 bp | CCATTTCCTTCCTATTTAAGCTCCCGGAAGTTTCATTCCTTGGCCTaGAGGCCCATACCACATATTTATTCATTTGATAATGCTAAATGT | + |
Preference number: 1 (lower is better) Translates to: PFPSYLSSRKFHSLA*RPIPHIYSFDNAKC Trigger: ACATTTAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAAACTTCCGGGAGCTTAAATAGGAAGGAAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGTCTCAGGTCACACTCTaGCATGGTGGGAAGTCGGGG | + |
Preference number: 2 (lower is better) Translates to: RFKVTLSYLVRSRPARDESQVTL*HGGKSG Trigger: CCCCGACTTCCCACCATGTCAGAGTGTGACCTGAGA...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | TGTAGCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTaGCTTTGTTATAGCAAACAGGACCATCATCCCAGGGGCAGTGTT | + |
Preference number: 2 (lower is better) Translates to: CSRGCGRTLLTGLLS*LCYSKQDHHPRGSV Trigger: AACACTGCCCCTGGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | ATTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTaGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAG | + |
Preference number: 2 (lower is better) Translates to: IFRFEHCGTRLECLH*GGGGRRLKVQSHPQ Trigger: CTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTAGGTCTATTGAAGTaGCCTTTGGGGAGGCATTTC | + |
Preference number: 2 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQVGLLK*PLGRHF Trigger: GAAATGCCTCCCCAAAGGTCACTTCAATAGACCTAC...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | GGTACTATTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTaGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCAC | + |
Preference number: 2 (lower is better) Translates to: GTIFRFEHCGTRLEC*HLGGGGRRLKVQSH Trigger: GTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCGAGCTGGAAGATGGCTaGGGAAGAGCTCATTCTGCT | + |
Preference number: 2 (lower is better) Translates to: EHCSLACSACFVIANRTIELEDG*GRAHSA Trigger: AGCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTC...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | ACTCTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAAGGGGAGGCATTTCTCTaGATGGCAGGCTCCGCATTT | + |
Preference number: 2 (lower is better) Translates to: TLSSKSLWGRETSLKEEKGEAFL*MAGSAF Trigger: AAATGCGGAGCCTGCCATTCAGAGAAATGCCTCCCC...TTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCATGGAGGAGTGACCACTaGGCTGGAAGATGGCTGAGG | + |
Preference number: 2 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPWRSDH*AGRWLR Trigger: CCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCA...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCGAAGCAGAGCAACGTTaGAAACCCATCAAACACAGG | + |
Preference number: 2 (lower is better) Translates to: LLTGLLSLLCYSKQDHHPEAEQR*KPIKHR Trigger: CCTGTGTTTGATGGGTTTTCAACGTTGCTCTGCTTC...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGTATTTCCATTGCTGTaGCAAAATACCATGACCAAA | + |
Preference number: 2 (lower is better) Translates to: LRHTPGMLAFGRWRQKAQVFPLL*QNTMTK Trigger: TTTGGTCATGGTATTTTGTCACAGCAATGGAAATAC...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCCCAGGACCAGGAAGTTaGGAATTCAGAGTGTTCCAT | + |
Preference number: 2 (lower is better) Translates to: LKVPRSLCRPRLGFLCTAPGPGS*EFRVFH Trigger: ATGGAACACTCTGAATTCTCAACTTCCTGGTCCTGG...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CCA 90 bp | AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGAGTGTTTGGTCTCCCTaGCTGTTAAATACTGTCTGG | + |
Preference number: 2 (lower is better) Translates to: RFKVTLSYLVRSRPARDESVWSP*LLNTVW Trigger: CCAGACAGTATTTAACAGCCAGGGAGACCAAACACT...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CCA 90 bp | CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCTGGAATGCTTGCATTTaGGAGGTGGAGGCAGAAGGC | + |
Preference number: 2 (lower is better) Translates to: LSSKSLWGRETSLKEEKSWNACI*EVEAEG Trigger: GCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCA...GGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTATCCTCCACCAGCCCCTaGACCTACAGGAAGCAGAGC | + |
Preference number: 2 (lower is better) Translates to: FIPWPGGPYHIFIHLIMLSSTSP*TYRKQS Trigger: GCTCTGCTTCCTGTAGGTTCAGGGGCTGGTGGAGGA...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR GCA 90 bp | CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCATAGATGGTGGGACCTaGAGAACCCCACTCCCTTTA | + |
Preference number: 2 (lower is better) Translates to: LSSKSLWGRETSLKEEKSIDGGT*RTPLPL Trigger: TAAAGGGAGTGGGGTTCTGCAGGTCCCACCATCTAT...GGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR GCA 90 bp | GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAAGGAAGAGCTCATTCTaGTTAAGAAGCTGCACACAG | + |
Preference number: 2 (lower is better) Translates to: AEAVEEHCSLACSACFVIRKSSF*LRSCTQ Trigger: CTGTGTGCAGCTTCTTAAGCAGAATGAGCTCTTCCT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | AGAGGGACCAAGGTAGAAGAAATTTATTTAATTGTCTGGGATTCTTaGCAATGTCCTGGAGGTGGAAGGGACAGGAGCTGGAGGAGTGAC | + |
Preference number: 2 (lower is better) Translates to: RGTKVEEIYLIVWDS*QCPGGGRDRSWRSD Trigger: GTCACTCCTCCAGCTCCTGTCCCTTCCACCTCCAGGACATTGCAAAGAATCCCAGACAATTAAATAAATTTCTTCTACCTTGGTCCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCCAGGAGCTGGAGGAGTaGCCACTGAGCTGGAAGATG | + |
Preference number: 2 (lower is better) Translates to: NTMTKSYLERKGFVSSYSQELEE*PLSWKM Trigger: CATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTG...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR GCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCACGCCTGGAATGCTTaGATTTGGGAGGTGGAGGCA | + |
Preference number: 2 (lower is better) Translates to: FHSFLSHSTLLILLLYLLHAWNA*IWEVEA Trigger: TGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTaGAGCATTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTG | + |
Preference number: 2 (lower is better) Translates to: LKRDQDRNQRVLFSD*SIAAHAWNACIWEV Trigger: CACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCCCAGGGCAGAGCCTCTaGCTGCTGATTTCACTTCAG | + |
Preference number: 2 (lower is better) Translates to: NTMTKSYLERKGFVSSYSPGQSL*LLISLQ Trigger: CTGAAGTGAAATCAGCAGTCAGAGGCTCTGCCCTGG...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCTTGCATTTGGGAGGTaGAGGCAGAAGGCTCAAGGT | + |
Preference number: 2 (lower is better) Translates to: FHSFLSHSTLLILLLYLLLAFGR*RQKAQG Trigger: ACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCATACATTTAAATTGCTaGAGCTACCACCTGGCATAT | + |
Preference number: 2 (lower is better) Translates to: LLHRSLIKNLPCTGLPSGIHLNC*SYHLAY Trigger: ATATGCCAGGTGGTAGCTTCAGCAATTTAAATGTAT...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CCA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCATCCTCTAAATCTCTCTaGGGTCGGGAAACATCTTTG | + |
Preference number: 2 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPSSKSL*GRETSL Trigger: CAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGA...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR GCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCTGGCTTGCTCAGCTTaGTTTGTTATAGCAAACAGG | + |
Preference number: 2 (lower is better) Translates to: FHSFLSHSTLLILLLYLLLACSA*FVIANR Trigger: CCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | AGGCTGGATATTGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTTaGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATTTAAGCTCC | + |
Preference number: 2 (lower is better) Translates to: RLDIEGCYVNRDVFL*VVSKKNPFPSYLSS Trigger: GGAGCTTAAATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACCTTCAATATCCAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR TCA 90 bp | AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCAGAGCCTCTGACTGCTaGTTTCACTTCAGTTTCTCA | + |
Preference number: 2 (lower is better) Translates to: NTMTKSYLERKGFVSSYSRASDC*FHFSFS Trigger: TGAGAAACTGAAGTGAAATCAGCAGTCAGAGGCTCT...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CCA 90 bp | AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCAGGCATTTCTCTGAATaGCAGGCTCCGCATTTAGAT | + |
Preference number: 2 (lower is better) Translates to: NTMTKSYLERKGFVSSYSRHFSE*QAPHLD Trigger: ATCTAAATGCGGAGCCTGCCATTCAGAGAAATGCCT...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR GCA 90 bp | TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTACTAGAAGTTTCTGTCTaGTCTTACAGCAGGAGAAGA | + |
Preference number: 2 (lower is better) Translates to: FIPWPGGPYHIFIHLIMLLEVSV*SYSRRR Trigger: TCTTCTCCTGCTGTAAGAGCAGACAGAAACTTCTAG...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 90 bp | GAACTGATTTTTATTTTTCATTCCTTCTTGAGTCACTCCACCCTCTaGATTCTTCTGTTATATCTGCTGTCCACTGATCTGTCTAACTGC | + |
Preference number: 2 (lower is better) Translates to: ELIFIFHSFLSHSTL*ILLLYLLSTDLSNC Trigger: GCAGTTAGACAGATCAGTGGACAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAAAATAAAAATCAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR GCA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTTTCTGCTTAAGAAGCTaGACACAGTTAGAGCTTTTG | + |
Preference number: 2 (lower is better) Translates to: LKRDQDRNQRVLFSDLSIFCLRS*TQLELL Trigger: CAAAAGCTCTAACTGTGTGCAGCTTCTTAAGCAGAA...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CCA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTTTAACACTCAGTGTTTaGTCTCCCTGGCTGTTAAAT | + |
Preference number: 2 (lower is better) Translates to: LKRDQDRNQRVLFSDLSILTLSV*SPWLLN Trigger: ATTTAACAGCCAGGGAGACCAAACACTGAGTGTTAA...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR GCA 72 bp | CTCCACTCACTCCCCCTCCTCATAGATGGTGGGACCTaGAGAACCCCACTCCCTTTAGTGCTGTGTGACGCC | + |
Preference number: 3 (lower is better) Translates to: LHSLPLLIDGGT*RTPLPLVLCDA Trigger: GGCGTCACACAGCACTAAAGGGAGTGGGGTTCTGCAGGTCCCACCATCTATGAGGAGGGGGAGTGAGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 72 bp | GGAGGTGGAAGGGACAGGAGCTGGAGGAGTGACCACTaGGCTGGAAGATGGCTGAGGAAGAGCTCATTCTGC | + |
Preference number: 3 (lower is better) Translates to: GGGRDRSWRSDH*AGRWLRKSSFC Trigger: GCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTGTCCCTTCCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 72 bp | TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTaGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCA | + |
Preference number: 3 (lower is better) Translates to: LRHTPGMLAFGR*RQKAQGSKSPS Trigger: TGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 72 bp | GGACTAAAAGCCTGTGTGGAACCTGGAATGATGAGGTaGAGCCCTGAGCAGGAGGAGAACTCTACCAGGACC | + |
Preference number: 3 (lower is better) Translates to: GLKACVEPGMMR*SPEQEENSTRT Trigger: GGTCCTGGTAGAGTTCTCCTCCTGCTCAGGGCTTCACCTCATCATTCCAGGTTCCACACAGGCTTTTAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 72 bp | TTCATCTTACAGCTCTCAGGTCACACTCTGACATGGTaGGAAGTCGGGGCAGAGACTGTAGCAGAGGCTGTG | + |
Preference number: 3 (lower is better) Translates to: FILQLSGHTLTW*EVGAETVAEAV Trigger: CACAGCCTCTGCTACAGTCTCTGCCCCGACTTCCCACCATGTCAGAGTGTGACCTGAGAGCTGTAAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 72 bp | TTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTTaGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTC | + |
Preference number: 3 (lower is better) Translates to: LSIAAHAWNACI*EVEAEGSRFKV Trigger: GACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
||
3UTR TCA 72 bp | AGGTCTATTGAAGTGACCTTTGGGGAGGCATTTCTCTaGATGGCAGGCTCCGCATTTAGATGGCCCAGTCCC | + |
Preference number: 3 (lower is better) Translates to: RSIEVTFGEAFL*MAGSAFRWPSP Trigger: GGGACTGGGCCATCTAAATGCGGAGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 72 bp | GTACTATTTTCAGATTTGAGCATTGCGGCACACGCCTaGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGC | + |
Preference number: 3 (lower is better) Translates to: VLFSDLSIAAHA*NACIWEVEAEG Trigger: GCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CAA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGACAGGAAAGATTAGGTaGGCTAGTGGTCTGAACTTG | + |
Preference number: 3 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQTGKIR*ASGLNL Trigger: CAAGTTCAGACCACTAGCCAACCTAATCTTTCCTGT...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
||
3UTR-3UTR CAA 90 bp | GTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAGGAAGCAGAGCAACGTaGAAAACCCATCAAACACAG | + |
Preference number: 3 (lower is better) Translates to: VEAEGSRFKVTLSYLVRSGSRAT*KTHQTQ Trigger: CTGTGTTTGATGGGTTTTCAACGTTGCTCTGCTTCC...TGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
||
3UTR GCA 72 bp | GTAGCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTaGTCAGCTTGCTTTGTTATAGCAAACAGGACCATC | + |
Preference number: 3 (lower is better) Translates to: VAEAVEEHCSLA*SACFVIANRTI Trigger: GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
||
3UTR TCA 72 bp | TTGGCTAGTGGTCTGAACTTGCAGGGGACAGGATCCTaGCATCACGCCTATAAGCATCTATCTCTTTTGCTG | + |
Preference number: 3 (lower is better) Translates to: LASGLNLQGTGS*HHAYKHLSLLL Trigger: CAGCAAAAGAGATAGATGCTTATAGGCGTGATGTCAGGATCCTGTCCCCTGCAAGTTCAGACCACTAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CAA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATTGTCTGGGATTCTTaGCAATGTCCTGGAGGTGGA | + |
Preference number: 3 (lower is better) Translates to: EHCSLACSACFVIANRTIIVWDS*QCPGGG Trigger: TCCACCTCCAGGACATTGCAAAGAATCCCAGACAAT...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
||
3UTR-3UTR CAA 90 bp | AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGTTAAAACAGAAATGGTaGGATAGGAGAGGTAGAGAA | + |
Preference number: 3 (lower is better) Translates to: RFKVTLSYLVRSRPARDELKQKW*DRRGRE Trigger: TTCTCTACCTCTCCTATCCAACCATTTCTGTTTTAA...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
||
3UTR TCA 72 bp | CAGTTAGAGCTTTTGTTCCTAGTAGGTCTATTGAAGTaGCCTTTGGGGAGGCATTTCTCTGAATGGCAGGCT | + |
Preference number: 3 (lower is better) Translates to: QLELLFLVGLLK*PLGRHFSEWQA Trigger: AGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGACCTACTAGGAACAAAAGCTCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 72 bp | TGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTaGAGGAGGAAAAATCCTGTAAGGAAGGGCTTTGGA | + |
Preference number: 3 (lower is better) Translates to: CPLNLSGVGKHL*RRKNPVRKGFG Trigger: TCCAAAGCCCTTCCTTACAGGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CAA 90 bp | ACTCTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAAACTGGCTTGCTCAGCTaGCTTTGTTATAGCAAACAG | + |
Preference number: 3 (lower is better) Translates to: TLSSKSLWGRETSLKEEKTGLLS*LCYSKQ Trigger: CTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGT...TTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAGAGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 72 bp | CAAGTCACAGAAGATGCTACAAGGTCCCTGACACACTaGCTGAAAAGAGACCAAGATAGGAATCAAAGGGTA | + |
Preference number: 3 (lower is better) Translates to: QVTEDATRSLTH*LKRDQDRNQRV Trigger: TACCCTTTGATTCCTATCTTGGTCTCTTTTCAGTCAGTGTGTCAGGGACCTTGTAGCATCTTCTGTGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR TCA 72 bp | ACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTaGGCATTGCGGCACACGCCTGGAATGCTTGCATTT | + |
Preference number: 3 (lower is better) Translates to: TKIGIKGYYFQI*ALRHTPGMLAF Trigger: AAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CAA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGGGTCGGGAAACATCTTaGAAGGAGGAAAAATCCTGT | + |
Preference number: 3 (lower is better) Translates to: FHSFLSHSTLLILLLYLLGRETS*KEEKSC Trigger: ACAGGATTTTTCCTCCTTCAAAGATGTTTCCCGACC...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CAA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAATTTTTCATTCCTTCTaGAGTCACTCCACCCTCTTG | + |
Preference number: 3 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPIFHSF*SHSTLL Trigger: CAAGAGGGTGGAGTGACTCAAGAAGGAATGAAAAAT...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR-3UTR CAA 90 bp | CCTTTTGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATTTAAGCTCCCGGAAATTAACACTCAGTGTTaGGTCTCCCTGGCTGTTAAA | + |
Preference number: 3 (lower is better) Translates to: PFGGFKEESISFLFKLPEINTQC*VSLAVK Trigger: TTTAACAGCCAGGGAGACCAAACACTGAGTGTTAAT...TTCCGGGAGCTTAAATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 72 bp | TCCTATTTAAGCTCCCGGAAGTTTCATTCCTTGGCCTaGAGGCCCATACCACATATTTATTCATTTGATAAT | + |
Preference number: 3 (lower is better) Translates to: SYLSSRKFHSLA*RPIPHIYSFDN Trigger: ATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAAACTTCCGGGAGCTTAAATAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CCA 72 bp | TTGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTTTaGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATT | + |
Preference number: 3 (lower is better) Translates to: LKVAMSTGMCSF*WFQRRIHFLPI Trigger: AATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACCTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAAGAGGCGCCGAAGCGTaGGGCAGCGCAGCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: LRHTPGMLAFGRWRQKAQRGAEA*GSAAAP Trigger: TGGAGCTGCTGCGCTGCCCCACGCTTCGGCGCCTCT...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAACAAGGCAGGGCTCTGTaGCTCCGGTGCCATTGGCCT | + |
Preference number: 4 (lower is better) Translates to: LRHTPGMLAFGRWRQKAQQGRAL*LRCHWP Trigger: AGGCCAATGGCACCGGAGTCACAGAGCCCTGCCTTG...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCCTGGCAGCAGGGCAGTaGCAGCGCTGGCGGCCACGG | + |
Preference number: 4 (lower is better) Translates to: LLTGLLSLLCYSKQDHHPLAAGQ*QRWRPR Trigger: CCGTGGCCGCCAGCGCTGTCACTGCCCTGCTGCCAG...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGGGTGGGCGGCAGTGGTaGGCGGGGATAGCAGCAGTG | + |
Preference number: 4 (lower is better) Translates to: RFKVTLSYLVRSRPARDEGGRQW*AGIAAV Trigger: CACTGCTGCTATCCCCGCTCACCACTGCCGCCCACC...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGACAGAGACCGCAAGCTaGAGGTGGCGCCAGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQTETAS*RWRQWG Trigger: GCCCCACTGGCGCCACCTGCAGCTTGCGGTCTCTGT...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCCCCGGGCCATGGTGCTaGCCATGCCCAGGCCCGTCT | + |
Preference number: 4 (lower is better) Translates to: LLTGLLSLLCYSKQDHHPPGPWC*PCPGPS Trigger: AGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGG...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCCCACCCGGGCCATGGTaGTGCCCATGCCCAGGCCCG | + |
Preference number: 4 (lower is better) Translates to: EHCSLACSACFVIANRTIPPGPW*CPCPGP Trigger: CGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGG...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAATGCGGGCCACTCTCTaGAGGGCTCGGAGGGTGAGG | + |
Preference number: 4 (lower is better) Translates to: VEAEGSRFKVTLSYLVRSMRATL*RARRVR Trigger: CCTCACCCTCCGAGCCCTGCAGAGAGTGGCCCGCAT...TGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGCTGGCCCAAGGTCTCTaGCAGCAGGGCAGTGACAGC | + |
Preference number: 4 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQLAQGL*QQGSDS Trigger: GCTGTCACTGCCCTGCTGCCAGAGACCTTGGGCCAG...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGTGGCGGAAGGCCCGATaGGAGCACACAAGGTTCCAC | + |
Preference number: 4 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQWRKAR*EHTRFH Trigger: GTGGAACCTTGTGTGCTCTCATCGGGCCTTCCGCCA...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGCAGCAGTGAAGTTCTaGAGGGTGTTGTGGGAAGCC | + |
Preference number: 4 (lower is better) Translates to: LRHTPGMLAFGRWRQKAQAAVKF*RVLWEA Trigger: GGCTTCCCACAACACCCTGCAGAACTTCACTGCTGC...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCACCGCAAGCTGCAGGTaGCGCCAGTGGGGCACAGCA | + |
Preference number: 4 (lower is better) Translates to: LLTGLLSLLCYSKQDHHPTASCR*RQWGTA Trigger: TGCTGTGCCCCACTGGCGCCACCTGCAGCTTGCGGT...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTCAGTGGGCTCACTATaGTGCCCACCCGGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: EHCSLACSACFVIANRTISVGSL*CPPGPW Trigger: CCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCACTGCTCTTCAGGTCCTaGACTGTATCAGGCAGCGGC | + |
Preference number: 4 (lower is better) Translates to: VEAEGSRFKVTLSYLVRSLLFRS*TVSGSG Trigger: GCCGCTGCCTGATACAGTGCAGGACCTGAAGAGCAG...TGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGTTGGCATTAGCAGGTaGGCGGCAGTGGTGAGCGGG | + |
Preference number: 4 (lower is better) Translates to: LLHRSLIKNLPCTGLPSGVGISR*AAVVSG Trigger: CCCGCTCACCACTGCCGCCCACCTGCTAATGCCAAC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCGTAACACTCCCACCATaGACAGGGACTGGGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LKVPRSLCRPRLGFLCTAVTLPP*TGTGPA Trigger: AGCTGGCCCAGTCCCTGTTCATGGTGGGAGTGTTAC...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGCATAGCCAATCAAGGTaGCCACATAGGCACGGGTGT | + |
Preference number: 4 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQHSQSR*PHRHGC Trigger: ACACCCGTGCCTATGTGGGCACCTTGATTGGCTATG...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAACCACCATGGTGACCTaGATCAGCTGGAAGCGTCCG | + |
Preference number: 4 (lower is better) Translates to: AEAVEEHCSLACSACFVITTMVT*ISWKRP Trigger: CGGACGCTTCCAGCTGATCCAGGTCACCATGGTGGT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTTCCTTCTGCAGGCTaGTCTGGAGCACCTCTATAC | + |
Preference number: 4 (lower is better) Translates to: GGGGRRLKVQSHPQLLSQVPSAG*SGAPLY Trigger: GTATAGAGGTGCTCCAGACCAGCCTGCAGAAGGAAC...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | TTTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTaGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: FEHCGTRLECLH*GGGGRRLKVQS Trigger: ACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | TTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTaGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGGTT | + |
Preference number: 4 (lower is better) Translates to: FRFEHCGTRLEC*HLGGGGRRLKV Trigger: AACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGCCTCTGTGCCATTGTaGGGGAAAGGAAAGCGGAGG | + |
Preference number: 4 (lower is better) Translates to: LLHRSLIKNLPCTGLPSGASVPL*GKGKRR Trigger: CCTCCGCTTTCCTTTCCCGCACAATGGCACAGAGGC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAGTGGGCTCACTATGCTaGCCACCCGGGCCATGGTGC | + |
Preference number: 4 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPVGSLC*PPGPWC Trigger: GCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCAC...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTAGCAGGGCTCGGAGGGTaGGGTCCAGCCTTCCAGAGG | + |
Preference number: 4 (lower is better) Translates to: FIPWPGGPYHIFIHLIMLAGLGG*GPAFQR Trigger: CCTCTGGAAGGCTGGACCTCACCCTCCGAGCCCTGC...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTCACTAGGATACAGATaGCTGCCAGCAGCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: EHCSLACSACFVIANRTISLGYR*LPAAGR Trigger: CCTCCCTGCTGCTGGCAGGCATCTGTATCCTAGTGA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCCATGGTGCTGCCCATaGCCAGGCCCGTCTGCCGAA | + |
Preference number: 4 (lower is better) Translates to: FHSFLSHSTLLILLLYLLPWCCP*PGPSAE Trigger: TTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGCTTTCCTCTGCTCCTaGTCTTCAGGTCCTGCACTG | + |
Preference number: 4 (lower is better) Translates to: LLHRSLIKNLPCTGLPSGAFLCS*SSGPAL Trigger: CAGTGCAGGACCTGAAGAGCAGGAGCAGAGGAAAGC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCAGCTGCTGTTGCTTCTaGTTTCCTCTGCTCCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LLTGLLSLLCYSKQDHHPSCCCF*FPLLLL Trigger: GAGCAGGAGCAGAGGAAAGCAGAAGCAACAGCAGCT...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCTTCTGCAGGGTGTTGTaGGAAGCCATCAGCAGTAGG | + |
Preference number: 4 (lower is better) Translates to: LKVPRSLCRPRLGFLCTAFCRVL*EAISSR Trigger: CCTACTGCTGATGGCTTCCCACAACACCCTGCAGAA...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | GGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTaGCTTTGTTATAGCAAACAGGACCATCATCCCAGG | + |
Preference number: 4 (lower is better) Translates to: GCGRTLLTGLLS*LCYSKQDHHPR Trigger: CCTGGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCACAGGAAGATGCAGTTaGAAGAGGAAGCCAGACAGC | + |
Preference number: 4 (lower is better) Translates to: LKVPRSLCRPRLGFLCTATGRCS*KRKPDS Trigger: GCTGTCTGGCTTCCTCTTTCAACTGCATCTTCCTGT...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCTGACCCCAAAGCCCTaGAGGTCCATGACCAGCCCG | + |
Preference number: 4 (lower is better) Translates to: FHSFLSHSTLLILLLYLLLTPKP*RSMTSP Trigger: CGGGCTGGTCATGGACCTGCAGGGCTTTGGGGTCAG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCTCCACTCAGTCACGATaGTTGAAGGGAAGGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: LKVPRSLCRPRLGFLCTASTQSR*LKGRCC Trigger: ACAGCACCTTCCCTTCAACCATCGTGACTGAGTGGA...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGAGCGCAGCAGCTCCATaGCGGAGGCCTGGCCTTTGT | + |
Preference number: 4 (lower is better) Translates to: FHSFLSHSTLLILLLYLLSAAAP*RRPGLC Trigger: ACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCT...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCAGTCATGCTTATCAGTaGGCTCACTATGCTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: LLTGLLSLLCYSKQDHHPSHAYQ*AHYAAH Trigger: GTGGGCAGCATAGTGAGCCCACTGATAAGCATGACT...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTCAGGGAGGCCAACTGTaGAGGCCGGCGGCCCATGGA | + |
Preference number: 4 (lower is better) Translates to: LKRDQDRNQRVLFSDLSIQGGQL*RPAAHG Trigger: TCCATGGGCCGCCGGCCTGCACAGTTGGCCTCCCTG...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAAGAACTCGGCAGTCATaGTTATCAGTGGGCTCACTA | + |
Preference number: 4 (lower is better) Translates to: AEAVEEHCSLACSACFVIRTRQS*LSVGSL Trigger: TAGTGAGCCCACTGATAAGCATGACTGCCGAGTTCT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTGTTCCAGCTGCTGTTaGTTCTGCTTTCCTCTGCTC | + |
Preference number: 4 (lower is better) Translates to: EHCSLACSACFVIANRTICSSCC*FCFPLL Trigger: GAGCAGAGGAAAGCAGAAGCAACAGCAGCTGGAACA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCGGTATCATCTGCTTCTaGTGTTCCAGCTGCTGTTGC | + |
Preference number: 4 (lower is better) Translates to: EHCSLACSACFVIANRTIGIICF*CSSCCC Trigger: GCAACAGCAGCTGGAACAGCAGAAGCAGATGATACC...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | TGTAGCAGAGGCTGTGGAAGAACACTGCTCACTGGCTaGCTCAGCTTGCTTTGTTATAGCAAACAGGACCAT | + |
Preference number: 4 (lower is better) Translates to: CSRGCGRTLLTG*LSLLCYSKQDH Trigger: ATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCTGGAGTGGTATCATCTaGTTCTGCTGTTCCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: LSSKSLWGRETSLKEEKSWSGII*FCCSSC Trigger: GCAGCTGGAACAGCAGAAGCAGATGATACCACTCCA...GGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | ACTCTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCATGGCGGAGGCCTaGCCTTTGTTTAGAGTCAGT | + |
Preference number: 4 (lower is better) Translates to: TLSSKSLWGRETSLKEEKSMAEA*PLFRVS Trigger: ACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGA...TTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGAGAGTCAGTTCCTTCTaGAGGCTGGTCTGGAGCACC | + |
Preference number: 4 (lower is better) Translates to: FHSFLSHSTLLILLLYLLRVSSF*RLVWST Trigger: GGTGCTCCAGACCAGCCTGCAGAAGGAACTGACTCT...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTACCATGAACAGGGACTaGGCCAGCTGGCGGAAGGCC | + |
Preference number: 4 (lower is better) Translates to: LKRDQDRNQRVLFSDLSITMNRD*ASWRKA Trigger: GGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCATGGT...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CCA 90 bp | TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTAGGAAGCACACAAACTTaGCAGGCAGGTCCACAGCGC | + |
Preference number: 4 (lower is better) Translates to: FIPWPGGPYHIFIHLIMLGSTQT*QAGPQR Trigger: GCGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCC...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTaGAAGGAGGAAAAATCCTGTAAGGAAGGGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: LSSKSLWGRETS*KEEKSCKEGLW Trigger: CCAAAGCCCTTCCTTACAGGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | GACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTaGAGCATTGCGGCACACGCCTGGAATGCTTGCATT | + |
Preference number: 4 (lower is better) Translates to: DQDRNQRVLFSD*SIAAHAWNACI Trigger: AATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR TCA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAGTTCTTCTCTTGTGTTaGGACCTGGAGTGGTATCAT | + |
Preference number: 4 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPVLLLC*DLEWYH Trigger: ATGATACCACTCCAGGTCTCAACACAAGAGAAGAAC...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CCTTTTGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATTTAAGCTCCCGGAAAGAGGAGCCGGAAAATaGAGTAGACAGTATAGTTGG | + |
Preference number: 4 (lower is better) Translates to: PFGGFKEESISFLFKLPERGAGK*SRQYSW Trigger: CCAACTATACTGTCTACTGCATTTTCCGGCTCCTCT...TTCCGGGAGCTTAAATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTAGGCCCCTCGGTATTATaGCATTCACTAGGATACAGA | + |
Preference number: 4 (lower is better) Translates to: FIPWPGGPYHIFIHLIMLGPSVL*HSLGYR Trigger: TCTGTATCCTAGTGAATGGCATAATACCGAGGGGCC...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTTGGTTGAAGGGAAGGTaGTGTTGTCATAGACCCAGC | + |
Preference number: 4 (lower is better) Translates to: LKRDQDRNQRVLFSDLSIWLKGR*CCHRPS Trigger: GCTGGGTCTATGACAACAGCACCTTCCCTTCAACCA...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR GCA 90 bp | CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTGACAGTATAGTTGGGTaGATAGGCTGCACAGGTTCC | + |
Preference number: 4 (lower is better) Translates to: LKRDQDRNQRVLFSDLSIDSIVG*IGCTGS Trigger: GGAACCTGTGCAGCCTATGCACCCAACTATACTGTC...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | ATTGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTTaGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTAT | + |
Preference number: 4 (lower is better) Translates to: IEGCYVNRDVFL*VVSKKNPFPSY Trigger: ATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACCTTCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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3UTR CAA 72 bp | AGTCCAGTTTATTCTTGTATAGTTAGAGGCTGGATATaGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTT | + |
Preference number: 4 (lower is better) Translates to: SPVYSCIVRGWI*KVAMSTGMCSF Trigger: AAAGGAACACATCCCTGTTGACATAGCAACCTTCAATATCCAGCCTCTAACTATACAAGAATAAACTGGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | AGGGGTAGAACTCGGCAGTCATGCTTATCAGTGGGCTCACTATGCTaGCCACCCGGGCCATGGTGCTGCCCATGCCCAGGCCCGTCTGCC | + |
Preference number: 5 (lower is better) Translates to: RGRTRQSCLSVGSLC*PPGPWCCPCPGPSA Trigger: GGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTGCCGAGTTCTACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 90 bp | AGGCGCCGAAGCGTGGGGCAGCGCAGCAGCTCCATGGCGGAGGCCTaGCCTTTGTTTAGAGTCAGTTCCTTCTGCAGGCTGGTCTGGAGC | + |
Preference number: 5 (lower is better) Translates to: RRRSVGQRSSSMAEA*PLFRVSSFCRLVWS Trigger: GCTCCAGACCAGCCTGCAGAAGGAACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCTGCCCCACGCTTCGGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | TGGAGGGGTAGAACTCGGCAGTCATGCTTATCAGTGGGCTCACTATaGTGCCCACCCGGGCCATGGTGCTGCCCATGCCCAGGCCCGTCT | + |
Preference number: 5 (lower is better) Translates to: WRGRTRQSCLSVGSL*CPPGPWCCPCPGPS Trigger: AGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTGCCGAGTTCTACCCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | TGCTTATCAGTGGGCTCACTATGCTGCCCACCCGGGCCATGGTGCTaGCCATGCCCAGGCCCGTCTGCCGAATCATTGTGGGGTACAGCT | + |
Preference number: 5 (lower is better) Translates to: CLSVGSLCCPPGPWC*PCPGPSAESLWGTA Trigger: AGCTGTACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 90 bp | CAGTCATGCTTATCAGTGGGCTCACTATGCTGCCCACCCGGGCCATaGTGCTGCCCATGCCCAGGCCCGTCTGCCGAATCATTGTGGGGT | + |
Preference number: 5 (lower is better) Translates to: QSCLSVGSLCCPPGP*CCPCPGPSAESLWG Trigger: ACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | CCATTGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTaGTTGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: PLCGKGKRRQDSGRP*LSRGSQASRPPSLL Trigger: CAGCAAAGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS TCA 90 bp | ACTCCCACCATGAACAGGGACTGGGCCAGCTGGCGGAAGGCCCGATaGGAGCACACAAGGTTCCACTCAGTCACGATGGTTGAAGGGAAG | + |
Preference number: 5 (lower is better) Translates to: TPTMNRDWASWRKAR*EHTRFHSVTMVEGK Trigger: CTTCCCTTCAACCATCGTGACTGAGTGGAACCTTGTGTGCTCTCATCGGGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCATGGTGGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 90 bp | GAGGCCTGGCCTTTGTTTAGAGTCAGTTCCTTCTGCAGGCTGGTCTaGAGCACCTCTATACTCAGCTTAGCCCCCTCTTCTTGTTTCCCG | + |
Preference number: 5 (lower is better) Translates to: EAWPLFRVSSFCRLV*STSILSLAPSSCFP Trigger: CGGGAAACAAGAAGAGGGGGCTAAGCTGAGTATAGAGGTGCTCCAGACCAGCCTGCAGAAGGAACTGACTCTAAACAAAGGCCAGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | CATGCCCGAGAGGAGCCGGAAAATGCAGTAGACAGTATAGTTGGGTaGATAGGCTGCACAGGTTCCCGACACAGCTGTTTGCAGGTAGTT | + |
Preference number: 5 (lower is better) Translates to: HAREEPENAVDSIVG*IGCTGSRHSCLQVV Trigger: AACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTCTCGGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 90 bp | AAGACATGCCCGAGAGGAGCCGGAAAATGCAGTAGACAGTATAGTTaGGTGCATAGGCTGCACAGGTTCCCGACACAGCTGTTTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: KTCPRGAGKCSRQYS*VHRLHRFPTQLFAG Trigger: ACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTCTCGGGCATGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGTGACTCCGGTGCCATaGGCCTCTGTGCCATTGTGC | + |
Preference number: 5 (lower is better) Translates to: LLHRSLIKNLPCTGLPSGVTPVP*ASVPLC Trigger: GCACAATGGCACAGAGGCCAATGGCACCGGAGTCAC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCCTTAGCCCCCTCTTCTaGTTTCCCGTTGATGCGGGC | + |
Preference number: 5 (lower is better) Translates to: LKVPRSLCRPRLGFLCTALSPLF*FPVDAG Trigger: GCCCGCATCAACGGGAAACAAGAAGAGGGGGCTAAG...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | GAGGAGCCGGAAAATGCAGTAGACAGTATAGTTGGGTGCATAGGCTaGACAGGTTCCCGACACAGCTGTTTGCAGGTAGTTCAAGATCAG | + |
Preference number: 5 (lower is better) Translates to: EEPENAVDSIVGCIG*TGSRHSCLQVVQDQ Trigger: CTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 90 bp | CAGAGTCCGTTCTTCTCTTGTGTTGAGACCTGGAGTGGTATCATCTaGTTCTGCTGTTCCAGCTGCTGTTGCTTCTGCTTTCCTCTGCTC | + |
Preference number: 5 (lower is better) Translates to: QSPFFSCVETWSGII*FCCSSCCCFCFPLL Trigger: GAGCAGAGGAAAGCAGAAGCAACAGCAGCTGGAACAGCAGAAGCAGATGATACCACTCCAGGTCTCAACACAAGAGAAGAACGGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 90 bp | AGACAGCCTTTCCCTAGTACAGCCAGGGATGTGCGAATGATTGTATaGCCCCTCGGTATTATGCCATTCACTAGGATACAGATGCCTGCC | + |
Preference number: 5 (lower is better) Translates to: RQPFPSTARDVRMIV*PLGIMPFTRIQMPA Trigger: GGCAGGCATCTGTATCCTAGTGAATGGCATAATACCGAGGGGCCATACAATCATTCGCACATCCCTGGCTGTACTAGGGAAAGGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAAAGTTCTGCAGGGTGTaGTGGGAAGCCATCAGCAGT | + |
Preference number: 5 (lower is better) Translates to: AEAVEEHCSLACSACFVIKFCRV*WEAISS Trigger: ACTGCTGATGGCTTCCCACAACACCCTGCAGAACTT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS TCA 90 bp | AGGAAGCCAGACAGCCTTTCCCTAGTACAGCCAGGGATGTGCGAATaGTTGTATGGCCCCTCGGTATTATGCCATTCACTAGGATACAGA | + |
Preference number: 5 (lower is better) Translates to: RKPDSLSLVQPGMCE*LYGPSVLCHSLGYR Trigger: TCTGTATCCTAGTGAATGGCATAATACCGAGGGGCCATACAATCATTCGCACATCCCTGGCTGTACTAGGGAAAGGCTGTCTGGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAACTCAGTCACGATGGTaGAAGGGAAGGTGCTGTTGT | + |
Preference number: 5 (lower is better) Translates to: AEAVEEHCSLACSACFVITQSRW*KGRCCC Trigger: ACAACAGCACCTTCCCTTCAACCATCGTGACTGAGT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTCCAGACCTCCATCTTaGCTGAGGTTGGCATTAGCA | + |
Preference number: 5 (lower is better) Translates to: EHCSLACSACFVIANRTISRPPS*LRLALA Trigger: TGCTAATGCCAACCTCAGCAAAGATGGAGGTCTGGA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCTCCCGACACAGCTGTTaGCAGGTAGTTCAAGATCAG | + |
Preference number: 5 (lower is better) Translates to: LLHRSLIKNLPCTGLPSGSRHSC*QVVQDQ Trigger: CTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGA...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAAGGAAGCACACAAACTaGGCAGGCAGGTCCACAGCG | + |
Preference number: 5 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPRKHTN*AGRSTA Trigger: CGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCCT...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCAGATTCGGGTCGTCCTaGCTTGTCCAGGGGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: NTMTKSYLERKGFVSSYSRFGSS*LVQGQP Trigger: TGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCT...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGGCGGAGGCCTGGCCTTaGTTTAGAGTCAGTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: FHSFLSHSTLLILLLYLLAEAWP*FRVSSF Trigger: GAAGGAACTGACTCTAAACAAAGGCCAGGCCTCCGC...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCACTGTTCCAGCTGCTGTaGCTTCTGCTTTCCTCTGCT | + |
Preference number: 5 (lower is better) Translates to: GCYVNRDVFLLVVSKKNPLFQLL*LLLSSA Trigger: AGCAGAGGAAAGCAGAAGCAACAGCAGCTGGAACAG...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS-3UTR CAA 90 bp | AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCCGTTCTTCTCTTGTGTaGAGACCTGGAGTGGTATCA | + |
Preference number: 5 (lower is better) Translates to: NTMTKSYLERKGFVSSYSRSSLV*RPGVVS Trigger: TGATACCACTCCAGGTCTCAACACAAGAGAAGAACG...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | GTGGGCTCACTATGCTGCCCACCCGGGCCATGGTGCTaGCCATGCCCAGGCCCGTCTGCCGAATCATTGTGG | + |
Preference number: 6 (lower is better) Translates to: VGSLCCPPGPWC*PCPGPSAESLW Trigger: CCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | ACCCGGGCCATGGTGCTGCCCATGCCCAGGCCCGTCTaGCGAATCATTGTGGGGTACAGCTCTCCGGTGTAC | + |
Preference number: 6 (lower is better) Translates to: TRAMVLPMPRPV*RIIVGYSSPVY Trigger: GTACACCGGAGAGCTGTACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | ACTCGGCAGTCATGCTTATCAGTGGGCTCACTATGCTaGCCACCCGGGCCATGGTGCTGCCCATGCCCAGGC | + |
Preference number: 6 (lower is better) Translates to: TRQSCLSVGSLC*PPGPWCCPCPG Trigger: GCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTGCCGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 72 bp | AGAGGCGCCGAAGCGTGGGGCAGCGCAGCAGCTCCATaGCGGAGGCCTGGCCTTTGTTTAGAGTCAGTTCCT | + |
Preference number: 6 (lower is better) Translates to: RGAEAWGSAAAP*RRPGLCLESVP Trigger: AGGAACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCTGCCCCACGCTTCGGCGCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 72 bp | TTATCAGTGGGCTCACTATGCTGCCCACCCGGGCCATaGTGCTGCCCATGCCCAGGCCCGTCTGCCGAATCA | + |
Preference number: 6 (lower is better) Translates to: LSVGSLCCPPGP*CCPCPGPSAES Trigger: TGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | CGAAGCGTGGGGCAGCGCAGCAGCTCCATGGCGGAGGCCTGGCCTTaGTTTAGAGTCAGTTCCTTCTGCAGGCTGGTCTGGAGCACCTCT | + |
Preference number: 6 (lower is better) Translates to: RSVGQRSSSMAEAWP*FRVSSFCRLVWSTS Trigger: AGAGGTGCTCCAGACCAGCCTGCAGAAGGAACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCTGCCCCACGCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | GCCAGCAGCAGGGAGGCCAACTGTGCAGGCCGGCGGCCCATGGAATaGATGACTAGGAAGCACACAAACTTGGCAGGCAGGTCCACAGCG | + |
Preference number: 6 (lower is better) Translates to: ASSREANCAGRRPME*MTRKHTNLAGRSTA Trigger: CGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCCTAGTCATCAATTCCATGGGCCGCCGGCCTGCACAGTTGGCCTCCCTGCTGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | GGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTaGTTGTCCAGGGGCAGCCAGGCCTCCAGACCTCCA | + |
Preference number: 6 (lower is better) Translates to: GKGKRRQDSGRP*LSRGSQASRPP Trigger: TGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 72 bp | CAGCCATCAAGGCAGGGCTCTGTGACTCCGGTGCCATaGGCCTCTGTGCCATTGTGCGGGAAAGGAAAGCGG | + |
Preference number: 6 (lower is better) Translates to: QPSRQGSVTPVP*ASVPLCGKGKR Trigger: CCGCTTTCCTTTCCCGCACAATGGCACAGAGGCCAATGGCACCGGAGTCACAGAGCCCTGCCTTGATGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | TTGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTGCTaGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCTTTGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: LCGKGKRRQDSGRPC*SRGSQASRPPSLLR Trigger: CCTCAGCAAAGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | GCCATTGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTaGCTTGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCTTTGCT | + |
Preference number: 6 (lower is better) Translates to: AIVRERKAEARFGSS*LVQGQPGLQTSIFA Trigger: AGCAAAGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | TCAAGGCAGGGCTCTGTGACTCCGGTGCCATTGGCCTCTGTGCCATaGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTGC | + |
Preference number: 6 (lower is better) Translates to: SRQGSVTPVPLASVP*CGKGKRRQDSGRPC Trigger: GCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGGCACAGAGGCCAATGGCACCGGAGTCACAGAGCCCTGCCTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | CAGGCTGGTCTGGAGCACCTCTATACTCAGCTTAGCCCCCTCTTCTaGTTTCCCGTTGATGCGGGCCACTCTCTGCAGGGCTCGGAGGGT | + |
Preference number: 6 (lower is better) Translates to: QAGLEHLYTQLSPLF*FPVDAGHSLQGSEG Trigger: ACCCTCCGAGCCCTGCAGAGAGTGGCCCGCATCAACGGGAAACAAGAAGAGGGGGCTAAGCTGAGTATAGAGGTGCTCCAGACCAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS TCA 72 bp | AGCCAAACATCATGGCTCCCAGTAACACTCCCACCATaGACAGGGACTGGGCCAGCTGGCGGAAGGCCCGAT | + |
Preference number: 6 (lower is better) Translates to: SQTSWLPVTLPP*TGTGPAGGRPD Trigger: ATCGGGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCATGGTGGGAGTGTTACTGGGAGCCATGATGTTTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | GGCCCCTCGGTATTATGCCATTCACTAGGATACAGATaGCTGCCAGCAGCAGGGAGGCCAACTGTGCAGGCC | + |
Preference number: 6 (lower is better) Translates to: GPSVLCHSLGYR*LPAAGRPTVQA Trigger: GGCCTGCACAGTTGGCCTCCCTGCTGCTGGCAGGCATCTGTATCCTAGTGAATGGCATAATACCGAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 72 bp | TGCTGCCCATGCCCAGGCCCGTCTGCCGAATCATTGTaGGGTACAGCTCTCCGGTGTACAGGAAGATGCAGT | + |
Preference number: 6 (lower is better) Translates to: CCPCPGPSAESL*GTALRCTGRCS Trigger: ACTGCATCTTCCTGTACACCGGAGAGCTGTACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 72 bp | AAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTGCTaGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCT | + |
Preference number: 6 (lower is better) Translates to: KGKRRQDSGRPC*SRGSQASRPPS Trigger: AGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 72 bp | GGCTCTGTGACTCCGGTGCCATTGGCCTCTGTGCCATaGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGT | + |
Preference number: 6 (lower is better) Translates to: GSVTPVPLASVP*CGKGKRRQDSG Trigger: ACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGGCACAGAGGCCAATGGCACCGGAGTCACAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 72 bp | AGGGAGGCCAACTGTGCAGGCCGGCGGCCCATGGAATaGATGACTAGGAAGCACACAAACTTGGCAGGCAGG | + |
Preference number: 6 (lower is better) Translates to: REANCAGRRPME*MTRKHTNLAGR Trigger: CCTGCCTGCCAAGTTTGTGTGCTTCCTAGTCATCAATTCCATGGGCCGCCGGCCTGCACAGTTGGCCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS TCA 72 bp | ATGAACAGGGACTGGGCCAGCTGGCGGAAGGCCCGATaGGAGCACACAAGGTTCCACTCAGTCACGATGGTT | + |
Preference number: 6 (lower is better) Translates to: MNRDWASWRKAR*EHTRFHSVTMV Trigger: AACCATCGTGACTGAGTGGAACCTTGTGTGCTCTCATCGGGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 72 bp | GGGTGCATAGGCTGCACAGGTTCCCGACACAGCTGTTaGCAGGTAGTTCAAGATCAGCACCTTCCGACGGCC | + |
Preference number: 6 (lower is better) Translates to: GCIGCTGSRHSC*QVVQDQHLPTA Trigger: GGCCGTCGGAAGGTGCTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 72 bp | TCTATACTCAGCTTAGCCCCCTCTTCTTGTTTCCCGTaGATGCGGGCCACTCTCTGCAGGGCTCGGAGGGTG | + |
Preference number: 6 (lower is better) Translates to: SILSLAPSSCFP*MRATLCRARRV Trigger: CACCCTCCGAGCCCTGCAGAGAGTGGCCCGCATCAACGGGAAACAAGAAGAGGGGGCTAAGCTGAGTATAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | GCAGGCCGGCGGCCCATGGAATTGATGACTAGGAAGCACACAAACTaGGCAGGCAGGTCCACAGCGCCGAAAATCACCTGGATAAGGTAC | + |
Preference number: 6 (lower is better) Translates to: AGRRPMELMTRKHTN*AGRSTAPKITWIRY Trigger: GTACCTTATCCAGGTGATTTTCGGCGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCCTAGTCATCAATTCCATGGGCCGCCGGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 72 bp | AACTTGGCAGGCAGGTCCACAGCGCCGAAAATCACCTaGATAAGGTACATGCTGACCCCAAAGCCCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: NLAGRSTAPKIT*IRYMLTPKPCR Trigger: CCTGCAGGGCTTTGGGGTCAGCATGTACCTTATCCAGGTGATTTTCGGCGCTGTGGACCTGCCTGCCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CAA 90 bp | AGTATAGTTGGGTGCATAGGCTGCACAGGTTCCCGACACAGCTGTTaGCAGGTAGTTCAAGATCAGCACCTTCCGACGGCCCAGCCTGTC | + |
Preference number: 6 (lower is better) Translates to: SIVGCIGCTGSRHSC*QVVQDQHLPTAQPV Trigger: GACAGGCTGGGCCGTCGGAAGGTGCTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS CCA 72 bp | CCGAGAGGAGCCGGAAAATGCAGTAGACAGTATAGTTaGGTGCATAGGCTGCACAGGTTCCCGACACAGCTG | + |
Preference number: 6 (lower is better) Translates to: PRGAGKCSRQYS*VHRLHRFPTQL Trigger: CAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | GAGGAGCCGGAAAATGCAGTAGACAGTATAGTTGGGTaGATAGGCTGCACAGGTTCCCGACACAGCTGTTTG | + |
Preference number: 6 (lower is better) Translates to: EEPENAVDSIVG*IGCTGSRHSCL Trigger: CAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS TCA 72 bp | GACAGCCTTTCCCTAGTACAGCCAGGGATGTGCGAATaGTTGTATGGCCCCTCGGTATTATGCCATTCACTA | + |
Preference number: 6 (lower is better) Translates to: DSLSLVQPGMCE*LYGPSVLCHSL Trigger: TAGTGAATGGCATAATACCGAGGGGCCATACAATCATTCGCACATCCCTGGCTGTACTAGGGAAAGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | TCTTGTGTTGAGACCTGGAGTGGTATCATCTGCTTCTaGTGTTCCAGCTGCTGTTGCTTCTGCTTTCCTCTG | + |
Preference number: 6 (lower is better) Translates to: SCVETWSGIICF*CSSCCCFCFPL Trigger: CAGAGGAAAGCAGAAGCAACAGCAGCTGGAACAGCAGAAGCAGATGATACCACTCCAGGTCTCAACACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |
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CDS GCA 72 bp | GAAAATGCAGTAGACAGTATAGTTGGGTGCATAGGCTaGACAGGTTCCCGACACAGCTGTTTGCAGGTAGTT | + |
Preference number: 6 (lower is better) Translates to: ENAVDSIVGCIG*TGSRHSCLQVV Trigger: AACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010250.4 |