RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024650

Ensembl transcript IDs: ENSMUST00000010250.4

Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAATGTCCTGGAGGTGGAAGGGACAGGAGCTGGAGGAGTGACCACTaGGCTGGAAGATGGCTGAGGAAGAGCTCATTCTGCTTAAGAAGC +
Preference number: 1 (lower is better)
Translates to: QCPGGGRDRSWRSDH*AGRWLRKSSFCLRS
Trigger: GCTTCTTAAGCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTGTCCCTTCCACCTCCAGGACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 90 bp TTCTTTGCAATGTCCTGGAGGTGGAAGGGACAGGAGCTGGAGGAGTaGCCACTGAGCTGGAAGATGGCTGAGGAAGAGCTCATTCTGCTT +
Preference number: 1 (lower is better)
Translates to: FFAMSWRWKGQELEE*PLSWKMAEEELILL
Trigger: AAGCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTGTCCCTTCCACCTCCAGGACATTGCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR GCA 90 bp TGGGAAGTCGGGGCAGAGACTGTAGCAGAGGCTGTGGAAGAACACTaGTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACC +
Preference number: 1 (lower is better)
Translates to: WEVGAETVAEAVEEH*SLACSACFVIANRT
Trigger: GGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTACAGTCTCTGCCCCGACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 90 bp GTTCCTAGTAGGTCTATTGAAGTGACCTTTGGGGAGGCATTTCTCTaGATGGCAGGCTCCGCATTTAGATGGCCCAGTCCCTCCACTCAC +
Preference number: 1 (lower is better)
Translates to: VPSRSIEVTFGEAFL*MAGSAFRWPSPSTH
Trigger: GTGAGTGGAGGGACTGGGCCATCTAAATGCGGAGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGACCTACTAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 90 bp TTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTTaGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGC +
Preference number: 1 (lower is better)
Translates to: FSDLSIAAHAWNACI*EVEAEGSRFKVTLS
Trigger: GCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR GCA 90 bp CACGCCTATAAGCATCTATCTCTTTTGCTGCTAGAAGTTTCTGTCTaGTCTTACAGCAGGAGAAGAGCCCAGGGCAGAGCCTCTGACTGC +
Preference number: 1 (lower is better)
Translates to: HAYKHLSLLLLEVSV*SYSRRRAQGRASDC
Trigger: GCAGTCAGAGGCTCTGCCCTGGGCTCTTCTCCTGCTGTAAGAGCAGACAGAAACTTCTAGCAGCAAAAGAGATAGATGCTTATAGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 90 bp CTGTTAAATACTGTCTGGTCCTCGTCTCACTCCTCCACCAGCCCCTaGACCTACAGGAAGCAGAGCAACGTTGAAAACCCATCAAACACA +
Preference number: 1 (lower is better)
Translates to: LLNTVWSSSHSSTSP*TYRKQSNVENPSNT
Trigger: TGTGTTTGATGGGTTTTCAACGTTGCTCTGCTTCCTGTAGGTTCAGGGGCTGGTGGAGGAGTGAGACGAGGACCAGACAGTATTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR GCA 90 bp AAGGGTACTATTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATaGTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGT +
Preference number: 1 (lower is better)
Translates to: KGTIFRFEHCGTRLE*LHLGGGGRRLKVQS
Trigger: ACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 90 bp CATCTTGGTCAAGTCACAGAAGATGCTACAAGGTCCCTGACACACTaGCTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCA +
Preference number: 1 (lower is better)
Translates to: HLGQVTEDATRSLTH*LKRDQDRNQRVLFS
Trigger: TGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAGTCAGTGTGTCAGGGACCTTGTAGCATCTTCTGTGACTTGACCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 90 bp CCATTTCCTTCCTATTTAAGCTCCCGGAAGTTTCATTCCTTGGCCTaGAGGCCCATACCACATATTTATTCATTTGATAATGCTAAATGT +
Preference number: 1 (lower is better)
Translates to: PFPSYLSSRKFHSLA*RPIPHIYSFDNAKC
Trigger: ACATTTAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAAACTTCCGGGAGCTTAAATAGGAAGGAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGTCTCAGGTCACACTCTaGCATGGTGGGAAGTCGGGG +
Preference number: 2 (lower is better)
Translates to: RFKVTLSYLVRSRPARDESQVTL*HGGKSG
Trigger: CCCCGACTTCCCACCATGTCAGAGTGTGACCTGAGA...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp TGTAGCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTaGCTTTGTTATAGCAAACAGGACCATCATCCCAGGGGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: CSRGCGRTLLTGLLS*LCYSKQDHHPRGSV
Trigger: AACACTGCCCCTGGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp ATTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTaGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAG +
Preference number: 2 (lower is better)
Translates to: IFRFEHCGTRLECLH*GGGGRRLKVQSHPQ
Trigger: CTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTAGGTCTATTGAAGTaGCCTTTGGGGAGGCATTTC +
Preference number: 2 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQVGLLK*PLGRHF
Trigger: GAAATGCCTCCCCAAAGGTCACTTCAATAGACCTAC...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp GGTACTATTTTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTaGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCAC +
Preference number: 2 (lower is better)
Translates to: GTIFRFEHCGTRLEC*HLGGGGRRLKVQSH
Trigger: GTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCGAGCTGGAAGATGGCTaGGGAAGAGCTCATTCTGCT +
Preference number: 2 (lower is better)
Translates to: EHCSLACSACFVIANRTIELEDG*GRAHSA
Trigger: AGCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTC...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp ACTCTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAAGGGGAGGCATTTCTCTaGATGGCAGGCTCCGCATTT +
Preference number: 2 (lower is better)
Translates to: TLSSKSLWGRETSLKEEKGEAFL*MAGSAF
Trigger: AAATGCGGAGCCTGCCATTCAGAGAAATGCCTCCCC...TTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCATGGAGGAGTGACCACTaGGCTGGAAGATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPWRSDH*AGRWLR
Trigger: CCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCA...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCGAAGCAGAGCAACGTTaGAAACCCATCAAACACAGG +
Preference number: 2 (lower is better)
Translates to: LLTGLLSLLCYSKQDHHPEAEQR*KPIKHR
Trigger: CCTGTGTTTGATGGGTTTTCAACGTTGCTCTGCTTC...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGTATTTCCATTGCTGTaGCAAAATACCATGACCAAA +
Preference number: 2 (lower is better)
Translates to: LRHTPGMLAFGRWRQKAQVFPLL*QNTMTK
Trigger: TTTGGTCATGGTATTTTGTCACAGCAATGGAAATAC...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCCCAGGACCAGGAAGTTaGGAATTCAGAGTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: LKVPRSLCRPRLGFLCTAPGPGS*EFRVFH
Trigger: ATGGAACACTCTGAATTCTCAACTTCCTGGTCCTGG...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CCA 90 bp AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGAGTGTTTGGTCTCCCTaGCTGTTAAATACTGTCTGG +
Preference number: 2 (lower is better)
Translates to: RFKVTLSYLVRSRPARDESVWSP*LLNTVW
Trigger: CCAGACAGTATTTAACAGCCAGGGAGACCAAACACT...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CCA 90 bp CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCTGGAATGCTTGCATTTaGGAGGTGGAGGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LSSKSLWGRETSLKEEKSWNACI*EVEAEG
Trigger: GCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCA...GGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTATCCTCCACCAGCCCCTaGACCTACAGGAAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: FIPWPGGPYHIFIHLIMLSSTSP*TYRKQS
Trigger: GCTCTGCTTCCTGTAGGTTCAGGGGCTGGTGGAGGA...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR GCA 90 bp CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCATAGATGGTGGGACCTaGAGAACCCCACTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: LSSKSLWGRETSLKEEKSIDGGT*RTPLPL
Trigger: TAAAGGGAGTGGGGTTCTGCAGGTCCCACCATCTAT...GGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR GCA 90 bp GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAAGGAAGAGCTCATTCTaGTTAAGAAGCTGCACACAG +
Preference number: 2 (lower is better)
Translates to: AEAVEEHCSLACSACFVIRKSSF*LRSCTQ
Trigger: CTGTGTGCAGCTTCTTAAGCAGAATGAGCTCTTCCT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp AGAGGGACCAAGGTAGAAGAAATTTATTTAATTGTCTGGGATTCTTaGCAATGTCCTGGAGGTGGAAGGGACAGGAGCTGGAGGAGTGAC +
Preference number: 2 (lower is better)
Translates to: RGTKVEEIYLIVWDS*QCPGGGRDRSWRSD
Trigger: GTCACTCCTCCAGCTCCTGTCCCTTCCACCTCCAGGACATTGCAAAGAATCCCAGACAATTAAATAAATTTCTTCTACCTTGGTCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCCAGGAGCTGGAGGAGTaGCCACTGAGCTGGAAGATG +
Preference number: 2 (lower is better)
Translates to: NTMTKSYLERKGFVSSYSQELEE*PLSWKM
Trigger: CATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTG...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR GCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCACGCCTGGAATGCTTaGATTTGGGAGGTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLHAWNA*IWEVEA
Trigger: TGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTaGAGCATTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LKRDQDRNQRVLFSD*SIAAHAWNACIWEV
Trigger: CACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCCCAGGGCAGAGCCTCTaGCTGCTGATTTCACTTCAG +
Preference number: 2 (lower is better)
Translates to: NTMTKSYLERKGFVSSYSPGQSL*LLISLQ
Trigger: CTGAAGTGAAATCAGCAGTCAGAGGCTCTGCCCTGG...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCTTGCATTTGGGAGGTaGAGGCAGAAGGCTCAAGGT +
Preference number: 2 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLLAFGR*RQKAQG
Trigger: ACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCATACATTTAAATTGCTaGAGCTACCACCTGGCATAT +
Preference number: 2 (lower is better)
Translates to: LLHRSLIKNLPCTGLPSGIHLNC*SYHLAY
Trigger: ATATGCCAGGTGGTAGCTTCAGCAATTTAAATGTAT...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CCA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCATCCTCTAAATCTCTCTaGGGTCGGGAAACATCTTTG +
Preference number: 2 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPSSKSL*GRETSL
Trigger: CAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGA...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR GCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCTGGCTTGCTCAGCTTaGTTTGTTATAGCAAACAGG +
Preference number: 2 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLLACSA*FVIANR
Trigger: CCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp AGGCTGGATATTGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTTaGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATTTAAGCTCC +
Preference number: 2 (lower is better)
Translates to: RLDIEGCYVNRDVFL*VVSKKNPFPSYLSS
Trigger: GGAGCTTAAATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACCTTCAATATCCAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR TCA 90 bp AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCAGAGCCTCTGACTGCTaGTTTCACTTCAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: NTMTKSYLERKGFVSSYSRASDC*FHFSFS
Trigger: TGAGAAACTGAAGTGAAATCAGCAGTCAGAGGCTCT...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CCA 90 bp AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCAGGCATTTCTCTGAATaGCAGGCTCCGCATTTAGAT +
Preference number: 2 (lower is better)
Translates to: NTMTKSYLERKGFVSSYSRHFSE*QAPHLD
Trigger: ATCTAAATGCGGAGCCTGCCATTCAGAGAAATGCCT...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR GCA 90 bp TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTACTAGAAGTTTCTGTCTaGTCTTACAGCAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: FIPWPGGPYHIFIHLIMLLEVSV*SYSRRR
Trigger: TCTTCTCCTGCTGTAAGAGCAGACAGAAACTTCTAG...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 90 bp GAACTGATTTTTATTTTTCATTCCTTCTTGAGTCACTCCACCCTCTaGATTCTTCTGTTATATCTGCTGTCCACTGATCTGTCTAACTGC +
Preference number: 2 (lower is better)
Translates to: ELIFIFHSFLSHSTL*ILLLYLLSTDLSNC
Trigger: GCAGTTAGACAGATCAGTGGACAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAAAATAAAAATCAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR GCA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTTTCTGCTTAAGAAGCTaGACACAGTTAGAGCTTTTG +
Preference number: 2 (lower is better)
Translates to: LKRDQDRNQRVLFSDLSIFCLRS*TQLELL
Trigger: CAAAAGCTCTAACTGTGTGCAGCTTCTTAAGCAGAA...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CCA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTTTAACACTCAGTGTTTaGTCTCCCTGGCTGTTAAAT +
Preference number: 2 (lower is better)
Translates to: LKRDQDRNQRVLFSDLSILTLSV*SPWLLN
Trigger: ATTTAACAGCCAGGGAGACCAAACACTGAGTGTTAA...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR GCA 72 bp CTCCACTCACTCCCCCTCCTCATAGATGGTGGGACCTaGAGAACCCCACTCCCTTTAGTGCTGTGTGACGCC +
Preference number: 3 (lower is better)
Translates to: LHSLPLLIDGGT*RTPLPLVLCDA
Trigger: GGCGTCACACAGCACTAAAGGGAGTGGGGTTCTGCAGGTCCCACCATCTATGAGGAGGGGGAGTGAGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp GGAGGTGGAAGGGACAGGAGCTGGAGGAGTGACCACTaGGCTGGAAGATGGCTGAGGAAGAGCTCATTCTGC +
Preference number: 3 (lower is better)
Translates to: GGGRDRSWRSDH*AGRWLRKSSFC
Trigger: GCAGAATGAGCTCTTCCTCAGCCATCTTCCAGCTCAGTGGTCACTCCTCCAGCTCCTGTCCCTTCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 72 bp TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTaGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCA +
Preference number: 3 (lower is better)
Translates to: LRHTPGMLAFGR*RQKAQGSKSPS
Trigger: TGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp GGACTAAAAGCCTGTGTGGAACCTGGAATGATGAGGTaGAGCCCTGAGCAGGAGGAGAACTCTACCAGGACC +
Preference number: 3 (lower is better)
Translates to: GLKACVEPGMMR*SPEQEENSTRT
Trigger: GGTCCTGGTAGAGTTCTCCTCCTGCTCAGGGCTTCACCTCATCATTCCAGGTTCCACACAGGCTTTTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 72 bp TTCATCTTACAGCTCTCAGGTCACACTCTGACATGGTaGGAAGTCGGGGCAGAGACTGTAGCAGAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: FILQLSGHTLTW*EVGAETVAEAV
Trigger: CACAGCCTCTGCTACAGTCTCTGCCCCGACTTCCCACCATGTCAGAGTGTGACCTGAGAGCTGTAAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 72 bp TTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTTaGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTC +
Preference number: 3 (lower is better)
Translates to: LSIAAHAWNACI*EVEAEGSRFKV
Trigger: GACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp AGGTCTATTGAAGTGACCTTTGGGGAGGCATTTCTCTaGATGGCAGGCTCCGCATTTAGATGGCCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: RSIEVTFGEAFL*MAGSAFRWPSP
Trigger: GGGACTGGGCCATCTAAATGCGGAGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 72 bp GTACTATTTTCAGATTTGAGCATTGCGGCACACGCCTaGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGC +
Preference number: 3 (lower is better)
Translates to: VLFSDLSIAAHA*NACIWEVEAEG
Trigger: GCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGACAGGAAAGATTAGGTaGGCTAGTGGTCTGAACTTG +
Preference number: 3 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQTGKIR*ASGLNL
Trigger: CAAGTTCAGACCACTAGCCAACCTAATCTTTCCTGT...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp GTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAGGAAGCAGAGCAACGTaGAAAACCCATCAAACACAG +
Preference number: 3 (lower is better)
Translates to: VEAEGSRFKVTLSYLVRSGSRAT*KTHQTQ
Trigger: CTGTGTTTGATGGGTTTTCAACGTTGCTCTGCTTCC...TGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR GCA 72 bp GTAGCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTaGTCAGCTTGCTTTGTTATAGCAAACAGGACCATC +
Preference number: 3 (lower is better)
Translates to: VAEAVEEHCSLA*SACFVIANRTI
Trigger: GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp TTGGCTAGTGGTCTGAACTTGCAGGGGACAGGATCCTaGCATCACGCCTATAAGCATCTATCTCTTTTGCTG +
Preference number: 3 (lower is better)
Translates to: LASGLNLQGTGS*HHAYKHLSLLL
Trigger: CAGCAAAAGAGATAGATGCTTATAGGCGTGATGTCAGGATCCTGTCCCCTGCAAGTTCAGACCACTAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATTGTCTGGGATTCTTaGCAATGTCCTGGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: EHCSLACSACFVIANRTIIVWDS*QCPGGG
Trigger: TCCACCTCCAGGACATTGCAAAGAATCCCAGACAAT...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGTTAAAACAGAAATGGTaGGATAGGAGAGGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: RFKVTLSYLVRSRPARDELKQKW*DRRGRE
Trigger: TTCTCTACCTCTCCTATCCAACCATTTCTGTTTTAA...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp CAGTTAGAGCTTTTGTTCCTAGTAGGTCTATTGAAGTaGCCTTTGGGGAGGCATTTCTCTGAATGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: QLELLFLVGLLK*PLGRHFSEWQA
Trigger: AGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGACCTACTAGGAACAAAAGCTCTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp TGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTaGAGGAGGAAAAATCCTGTAAGGAAGGGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: CPLNLSGVGKHL*RRKNPVRKGFG
Trigger: TCCAAAGCCCTTCCTTACAGGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp ACTCTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAAACTGGCTTGCTCAGCTaGCTTTGTTATAGCAAACAG +
Preference number: 3 (lower is better)
Translates to: TLSSKSLWGRETSLKEEKTGLLS*LCYSKQ
Trigger: CTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGT...TTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAGAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp CAAGTCACAGAAGATGCTACAAGGTCCCTGACACACTaGCTGAAAAGAGACCAAGATAGGAATCAAAGGGTA +
Preference number: 3 (lower is better)
Translates to: QVTEDATRSLTH*LKRDQDRNQRV
Trigger: TACCCTTTGATTCCTATCTTGGTCTCTTTTCAGTCAGTGTGTCAGGGACCTTGTAGCATCTTCTGTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR TCA 72 bp ACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTaGGCATTGCGGCACACGCCTGGAATGCTTGCATTT +
Preference number: 3 (lower is better)
Translates to: TKIGIKGYYFQI*ALRHTPGMLAF
Trigger: AAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGGGTCGGGAAACATCTTaGAAGGAGGAAAAATCCTGT +
Preference number: 3 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLGRETS*KEEKSC
Trigger: ACAGGATTTTTCCTCCTTCAAAGATGTTTCCCGACC...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAATTTTTCATTCCTTCTaGAGTCACTCCACCCTCTTG +
Preference number: 3 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPIFHSF*SHSTLL
Trigger: CAAGAGGGTGGAGTGACTCAAGAAGGAATGAAAAAT...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR-3UTR CAA 90 bp CCTTTTGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATTTAAGCTCCCGGAAATTAACACTCAGTGTTaGGTCTCCCTGGCTGTTAAA +
Preference number: 3 (lower is better)
Translates to: PFGGFKEESISFLFKLPEINTQC*VSLAVK
Trigger: TTTAACAGCCAGGGAGACCAAACACTGAGTGTTAAT...TTCCGGGAGCTTAAATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 72 bp TCCTATTTAAGCTCCCGGAAGTTTCATTCCTTGGCCTaGAGGCCCATACCACATATTTATTCATTTGATAAT +
Preference number: 3 (lower is better)
Translates to: SYLSSRKFHSLA*RPIPHIYSFDN
Trigger: ATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAAACTTCCGGGAGCTTAAATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CCA 72 bp TTGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTTTaGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATT +
Preference number: 3 (lower is better)
Translates to: LKVAMSTGMCSF*WFQRRIHFLPI
Trigger: AATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAAGAGGCGCCGAAGCGTaGGGCAGCGCAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRHTPGMLAFGRWRQKAQRGAEA*GSAAAP
Trigger: TGGAGCTGCTGCGCTGCCCCACGCTTCGGCGCCTCT...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAACAAGGCAGGGCTCTGTaGCTCCGGTGCCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: LRHTPGMLAFGRWRQKAQQGRAL*LRCHWP
Trigger: AGGCCAATGGCACCGGAGTCACAGAGCCCTGCCTTG...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCCTGGCAGCAGGGCAGTaGCAGCGCTGGCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LLTGLLSLLCYSKQDHHPLAAGQ*QRWRPR
Trigger: CCGTGGCCGCCAGCGCTGTCACTGCCCTGCTGCCAG...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp AGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAAGGCCAGCTAGGGATGAGGGTGGGCGGCAGTGGTaGGCGGGGATAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RFKVTLSYLVRSRPARDEGGRQW*AGIAAV
Trigger: CACTGCTGCTATCCCCGCTCACCACTGCCGCCCACC...CTCATCCCTAGCTGGCCTTGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGACAGAGACCGCAAGCTaGAGGTGGCGCCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQTETAS*RWRQWG
Trigger: GCCCCACTGGCGCCACCTGCAGCTTGCGGTCTCTGT...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCCCCGGGCCATGGTGCTaGCCATGCCCAGGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LLTGLLSLLCYSKQDHHPPGPWC*PCPGPS
Trigger: AGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGG...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCCCACCCGGGCCATGGTaGTGCCCATGCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: EHCSLACSACFVIANRTIPPGPW*CPCPGP
Trigger: CGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGG...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCAATGCGGGCCACTCTCTaGAGGGCTCGGAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VEAEGSRFKVTLSYLVRSMRATL*RARRVR
Trigger: CCTCACCCTCCGAGCCCTGCAGAGAGTGGCCCGCAT...TGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGCTGGCCCAAGGTCTCTaGCAGCAGGGCAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQLAQGL*QQGSDS
Trigger: GCTGTCACTGCCCTGCTGCCAGAGACCTTGGGCCAG...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGTGGCGGAAGGCCCGATaGGAGCACACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQWRKAR*EHTRFH
Trigger: GTGGAACCTTGTGTGCTCTCATCGGGCCTTCCGCCA...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp TTGCGGCACACGCCTGGAATGCTTGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGCAGCAGTGAAGTTCTaGAGGGTGTTGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRHTPGMLAFGRWRQKAQAAVKF*RVLWEA
Trigger: GGCTTCCCACAACACCCTGCAGAACTTCACTGCTGC...TTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCACCGCAAGCTGCAGGTaGCGCCAGTGGGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLTGLLSLLCYSKQDHHPTASCR*RQWGTA
Trigger: TGCTGTGCCCCACTGGCGCCACCTGCAGCTTGCGGT...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTCAGTGGGCTCACTATaGTGCCCACCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: EHCSLACSACFVIANRTISVGSL*CPPGPW
Trigger: CCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTCACTGCTCTTCAGGTCCTaGACTGTATCAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VEAEGSRFKVTLSYLVRSLLFRS*TVSGSG
Trigger: GCCGCTGCCTGATACAGTGCAGGACCTGAAGAGCAG...TGACCTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGTTGGCATTAGCAGGTaGGCGGCAGTGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLHRSLIKNLPCTGLPSGVGISR*AAVVSG
Trigger: CCCGCTCACCACTGCCGCCCACCTGCTAATGCCAAC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCGTAACACTCCCACCATaGACAGGGACTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKVPRSLCRPRLGFLCTAVTLPP*TGTGPA
Trigger: AGCTGGCCCAGTCCCTGTTCATGGTGGGAGTGTTAC...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGCATAGCCAATCAAGGTaGCCACATAGGCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQHSQSR*PHRHGC
Trigger: ACACCCGTGCCTATGTGGGCACCTTGATTGGCTATG...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAACCACCATGGTGACCTaGATCAGCTGGAAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: AEAVEEHCSLACSACFVITTMVT*ISWKRP
Trigger: CGGACGCTTCCAGCTGATCCAGGTCACCATGGTGGT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp GGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGTCACCCTCAGCTACTTAGTCAGGTTCCTTCTGCAGGCTaGTCTGGAGCACCTCTATAC +
Preference number: 4 (lower is better)
Translates to: GGGGRRLKVQSHPQLLSQVPSAG*SGAPLY
Trigger: GTATAGAGGTGCTCCAGACCAGCCTGCAGAAGGAAC...CTGACTAAGTAGCTGAGGGTGACTTTGAACCTTGAGCCTTCTGCCTCCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp TTTGAGCATTGCGGCACACGCCTGGAATGCTTGCATTaGGGAGGTGGAGGCAGAAGGCTCAAGGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FEHCGTRLECLH*GGGGRRLKVQS
Trigger: ACTTTGAACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp TTCAGATTTGAGCATTGCGGCACACGCCTGGAATGCTaGCATTTGGGAGGTGGAGGCAGAAGGCTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FRFEHCGTRLEC*HLGGGGRRLKV
Trigger: AACCTTGAGCCTTCTGCCTCCACCTCCCAAATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGCCTCTGTGCCATTGTaGGGGAAAGGAAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LLHRSLIKNLPCTGLPSGASVPL*GKGKRR
Trigger: CCTCCGCTTTCCTTTCCCGCACAATGGCACAGAGGC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAGTGGGCTCACTATGCTaGCCACCCGGGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPVGSLC*PPGPWC
Trigger: GCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCAC...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTAGCAGGGCTCGGAGGGTaGGGTCCAGCCTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FIPWPGGPYHIFIHLIMLAGLGG*GPAFQR
Trigger: CCTCTGGAAGGCTGGACCTCACCCTCCGAGCCCTGC...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTCACTAGGATACAGATaGCTGCCAGCAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EHCSLACSACFVIANRTISLGYR*LPAAGR
Trigger: CCTCCCTGCTGCTGGCAGGCATCTGTATCCTAGTGA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCCATGGTGCTGCCCATaGCCAGGCCCGTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLPWCCP*PGPSAE
Trigger: TTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGCTTTCCTCTGCTCCTaGTCTTCAGGTCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: LLHRSLIKNLPCTGLPSGAFLCS*SSGPAL
Trigger: CAGTGCAGGACCTGAAGAGCAGGAGCAGAGGAAAGC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCAGCTGCTGTTGCTTCTaGTTTCCTCTGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLTGLLSLLCYSKQDHHPSCCCF*FPLLLL
Trigger: GAGCAGGAGCAGAGGAAAGCAGAAGCAACAGCAGCT...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCTTCTGCAGGGTGTTGTaGGAAGCCATCAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LKVPRSLCRPRLGFLCTAFCRVL*EAISSR
Trigger: CCTACTGCTGATGGCTTCCCACAACACCCTGCAGAA...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp GGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTaGCTTTGTTATAGCAAACAGGACCATCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: GCGRTLLTGLLS*LCYSKQDHHPR
Trigger: CCTGGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCACAGGAAGATGCAGTTaGAAGAGGAAGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LKVPRSLCRPRLGFLCTATGRCS*KRKPDS
Trigger: GCTGTCTGGCTTCCTCTTTCAACTGCATCTTCCTGT...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGCTGACCCCAAAGCCCTaGAGGTCCATGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLLTPKP*RSMTSP
Trigger: CGGGCTGGTCATGGACCTGCAGGGCTTTGGGGTCAG...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCTCCACTCAGTCACGATaGTTGAAGGGAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKVPRSLCRPRLGFLCTASTQSR*LKGRCC
Trigger: ACAGCACCTTCCCTTCAACCATCGTGACTGAGTGGA...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGAGCGCAGCAGCTCCATaGCGGAGGCCTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLSAAAP*RRPGLC
Trigger: ACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCT...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp CTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCATCCCAGTCATGCTTATCAGTaGGCTCACTATGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LLTGLLSLLCYSKQDHHPSHAYQ*AHYAAH
Trigger: GTGGGCAGCATAGTGAGCCCACTGATAAGCATGACT...GGGATGATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTCAGGGAGGCCAACTGTaGAGGCCGGCGGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LKRDQDRNQRVLFSDLSIQGGQL*RPAAHG
Trigger: TCCATGGGCCGCCGGCCTGCACAGTTGGCCTCCCTG...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAAGAACTCGGCAGTCATaGTTATCAGTGGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: AEAVEEHCSLACSACFVIRTRQS*LSVGSL
Trigger: TAGTGAGCCCACTGATAAGCATGACTGCCGAGTTCT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTGTTCCAGCTGCTGTTaGTTCTGCTTTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EHCSLACSACFVIANRTICSSCC*FCFPLL
Trigger: GAGCAGAGGAAAGCAGAAGCAACAGCAGCTGGAACA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCGGTATCATCTGCTTCTaGTGTTCCAGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: EHCSLACSACFVIANRTIGIICF*CSSCCC
Trigger: GCAACAGCAGCTGGAACAGCAGAAGCAGATGATACC...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp TGTAGCAGAGGCTGTGGAAGAACACTGCTCACTGGCTaGCTCAGCTTGCTTTGTTATAGCAAACAGGACCAT +
Preference number: 4 (lower is better)
Translates to: CSRGCGRTLLTG*LSLLCYSKQDH
Trigger: ATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCTGGAGTGGTATCATCTaGTTCTGCTGTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSKSLWGRETSLKEEKSWSGII*FCCSSC
Trigger: GCAGCTGGAACAGCAGAAGCAGATGATACCACTCCA...GGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp ACTCTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTTGAAGGAGGAAAAATCCATGGCGGAGGCCTaGCCTTTGTTTAGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: TLSSKSLWGRETSLKEEKSMAEA*PLFRVS
Trigger: ACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGA...TTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGAGAGTCAGTTCCTTCTaGAGGCTGGTCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLRVSSF*RLVWST
Trigger: GGTGCTCCAGACCAGCCTGCAGAAGGAACTGACTCT...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTACCATGAACAGGGACTaGGCCAGCTGGCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LKRDQDRNQRVLFSDLSITMNRD*ASWRKA
Trigger: GGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCATGGT...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CCA 90 bp TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTAGGAAGCACACAAACTTaGCAGGCAGGTCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: FIPWPGGPYHIFIHLIMLGSTQT*QAGPQR
Trigger: GCGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCC...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp CTGTCCTCTAAATCTCTCTGGGGTCGGGAAACATCTTaGAAGGAGGAAAAATCCTGTAAGGAAGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSSKSLWGRETS*KEEKSCKEGLW
Trigger: CCAAAGCCCTTCCTTACAGGATTTTTCCTCCTTCAAAGATGTTTCCCGACCCCAGAGAGATTTAGAGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp GACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTaGAGCATTGCGGCACACGCCTGGAATGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: DQDRNQRVLFSD*SIAAHAWNACI
Trigger: AATGCAAGCATTCCAGGCGTGTGCCGCAATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR TCA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAGTTCTTCTCTTGTGTTaGGACCTGGAGTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPVLLLC*DLEWYH
Trigger: ATGATACCACTCCAGGTCTCAACACAAGAGAAGAAC...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CCTTTTGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTATTTAAGCTCCCGGAAAGAGGAGCCGGAAAATaGAGTAGACAGTATAGTTGG +
Preference number: 4 (lower is better)
Translates to: PFGGFKEESISFLFKLPERGAGK*SRQYSW
Trigger: CCAACTATACTGTCTACTGCATTTTCCGGCTCCTCT...TTCCGGGAGCTTAAATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp TTCATTCCTTGGCCTGGAGGCCCATACCACATATTTATTCATTTGATAATGCTAGGCCCCTCGGTATTATaGCATTCACTAGGATACAGA +
Preference number: 4 (lower is better)
Translates to: FIPWPGGPYHIFIHLIMLGPSVL*HSLGYR
Trigger: TCTGTATCCTAGTGAATGGCATAATACCGAGGGGCC...TAGCATTATCAAATGAATAAATATGTGGTATGGGCCTCCAGGCCAAGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTTGGTTGAAGGGAAGGTaGTGTTGTCATAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LKRDQDRNQRVLFSDLSIWLKGR*CCHRPS
Trigger: GCTGGGTCTATGACAACAGCACCTTCCCTTCAACCA...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR GCA 90 bp CTGAAAAGAGACCAAGATAGGAATCAAAGGGTACTATTTTCAGATTTGAGCATTGACAGTATAGTTGGGTaGATAGGCTGCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LKRDQDRNQRVLFSDLSIDSIVG*IGCTGS
Trigger: GGAACCTGTGCAGCCTATGCACCCAACTATACTGTC...AATGCTCAAATCTGAAAATAGTACCCTTTGATTCCTATCTTGGTCTCTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp ATTGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTTaGGTGGTTTCAAAGAAGAATCCATTTCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: IEGCYVNRDVFL*VVSKKNPFPSY
Trigger: ATAGGAAGGAAATGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACCTTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
3UTR CAA 72 bp AGTCCAGTTTATTCTTGTATAGTTAGAGGCTGGATATaGAAGGTTGCTATGTCAACAGGGATGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPVYSCIVRGWI*KVAMSTGMCSF
Trigger: AAAGGAACACATCCCTGTTGACATAGCAACCTTCAATATCCAGCCTCTAACTATACAAGAATAAACTGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp AGGGGTAGAACTCGGCAGTCATGCTTATCAGTGGGCTCACTATGCTaGCCACCCGGGCCATGGTGCTGCCCATGCCCAGGCCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: RGRTRQSCLSVGSLC*PPGPWCCPCPGPSA
Trigger: GGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTGCCGAGTTCTACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 90 bp AGGCGCCGAAGCGTGGGGCAGCGCAGCAGCTCCATGGCGGAGGCCTaGCCTTTGTTTAGAGTCAGTTCCTTCTGCAGGCTGGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RRRSVGQRSSSMAEA*PLFRVSSFCRLVWS
Trigger: GCTCCAGACCAGCCTGCAGAAGGAACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCTGCCCCACGCTTCGGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp TGGAGGGGTAGAACTCGGCAGTCATGCTTATCAGTGGGCTCACTATaGTGCCCACCCGGGCCATGGTGCTGCCCATGCCCAGGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: WRGRTRQSCLSVGSL*CPPGPWCCPCPGPS
Trigger: AGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTGCCGAGTTCTACCCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp TGCTTATCAGTGGGCTCACTATGCTGCCCACCCGGGCCATGGTGCTaGCCATGCCCAGGCCCGTCTGCCGAATCATTGTGGGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: CLSVGSLCCPPGPWC*PCPGPSAESLWGTA
Trigger: AGCTGTACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 90 bp CAGTCATGCTTATCAGTGGGCTCACTATGCTGCCCACCCGGGCCATaGTGCTGCCCATGCCCAGGCCCGTCTGCCGAATCATTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: QSCLSVGSLCCPPGP*CCPCPGPSAESLWG
Trigger: ACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp CCATTGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTaGTTGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PLCGKGKRRQDSGRP*LSRGSQASRPPSLL
Trigger: CAGCAAAGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS TCA 90 bp ACTCCCACCATGAACAGGGACTGGGCCAGCTGGCGGAAGGCCCGATaGGAGCACACAAGGTTCCACTCAGTCACGATGGTTGAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: TPTMNRDWASWRKAR*EHTRFHSVTMVEGK
Trigger: CTTCCCTTCAACCATCGTGACTGAGTGGAACCTTGTGTGCTCTCATCGGGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCATGGTGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 90 bp GAGGCCTGGCCTTTGTTTAGAGTCAGTTCCTTCTGCAGGCTGGTCTaGAGCACCTCTATACTCAGCTTAGCCCCCTCTTCTTGTTTCCCG +
Preference number: 5 (lower is better)
Translates to: EAWPLFRVSSFCRLV*STSILSLAPSSCFP
Trigger: CGGGAAACAAGAAGAGGGGGCTAAGCTGAGTATAGAGGTGCTCCAGACCAGCCTGCAGAAGGAACTGACTCTAAACAAAGGCCAGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp CATGCCCGAGAGGAGCCGGAAAATGCAGTAGACAGTATAGTTGGGTaGATAGGCTGCACAGGTTCCCGACACAGCTGTTTGCAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: HAREEPENAVDSIVG*IGCTGSRHSCLQVV
Trigger: AACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTCTCGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 90 bp AAGACATGCCCGAGAGGAGCCGGAAAATGCAGTAGACAGTATAGTTaGGTGCATAGGCTGCACAGGTTCCCGACACAGCTGTTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: KTCPRGAGKCSRQYS*VHRLHRFPTQLFAG
Trigger: ACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTCTCGGGCATGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCGTGACTCCGGTGCCATaGGCCTCTGTGCCATTGTGC +
Preference number: 5 (lower is better)
Translates to: LLHRSLIKNLPCTGLPSGVTPVP*ASVPLC
Trigger: GCACAATGGCACAGAGGCCAATGGCACCGGAGTCAC...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp TTGAAAGTTCCAAGGAGTTTGTGTAGACCTCGTCTAGGGTTCCTCTGCACAGCCCTTAGCCCCCTCTTCTaGTTTCCCGTTGATGCGGGC +
Preference number: 5 (lower is better)
Translates to: LKVPRSLCRPRLGFLCTALSPLF*FPVDAG
Trigger: GCCCGCATCAACGGGAAACAAGAAGAGGGGGCTAAG...GGCTGTGCAGAGGAACCCTAGACGAGGTCTACACAAACTCCTTGGAACTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp GAGGAGCCGGAAAATGCAGTAGACAGTATAGTTGGGTGCATAGGCTaGACAGGTTCCCGACACAGCTGTTTGCAGGTAGTTCAAGATCAG +
Preference number: 5 (lower is better)
Translates to: EEPENAVDSIVGCIG*TGSRHSCLQVVQDQ
Trigger: CTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 90 bp CAGAGTCCGTTCTTCTCTTGTGTTGAGACCTGGAGTGGTATCATCTaGTTCTGCTGTTCCAGCTGCTGTTGCTTCTGCTTTCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: QSPFFSCVETWSGII*FCCSSCCCFCFPLL
Trigger: GAGCAGAGGAAAGCAGAAGCAACAGCAGCTGGAACAGCAGAAGCAGATGATACCACTCCAGGTCTCAACACAAGAGAAGAACGGACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 90 bp AGACAGCCTTTCCCTAGTACAGCCAGGGATGTGCGAATGATTGTATaGCCCCTCGGTATTATGCCATTCACTAGGATACAGATGCCTGCC +
Preference number: 5 (lower is better)
Translates to: RQPFPSTARDVRMIV*PLGIMPFTRIQMPA
Trigger: GGCAGGCATCTGTATCCTAGTGAATGGCATAATACCGAGGGGCCATACAATCATTCGCACATCCCTGGCTGTACTAGGGAAAGGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAAAGTTCTGCAGGGTGTaGTGGGAAGCCATCAGCAGT +
Preference number: 5 (lower is better)
Translates to: AEAVEEHCSLACSACFVIKFCRV*WEAISS
Trigger: ACTGCTGATGGCTTCCCACAACACCCTGCAGAACTT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS TCA 90 bp AGGAAGCCAGACAGCCTTTCCCTAGTACAGCCAGGGATGTGCGAATaGTTGTATGGCCCCTCGGTATTATGCCATTCACTAGGATACAGA +
Preference number: 5 (lower is better)
Translates to: RKPDSLSLVQPGMCE*LYGPSVLCHSLGYR
Trigger: TCTGTATCCTAGTGAATGGCATAATACCGAGGGGCCATACAATCATTCGCACATCCCTGGCTGTACTAGGGAAAGGCTGTCTGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp GCAGAGGCTGTGGAAGAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAACTCAGTCACGATGGTaGAAGGGAAGGTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: AEAVEEHCSLACSACFVITQSRW*KGRCCC
Trigger: ACAACAGCACCTTCCCTTCAACCATCGTGACTGAGT...TATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTCTTCCACAGCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp GAACACTGCTCACTGGCTTGCTCAGCTTGCTTTGTTATAGCAAACAGGACCATCTCCAGACCTCCATCTTaGCTGAGGTTGGCATTAGCA +
Preference number: 5 (lower is better)
Translates to: EHCSLACSACFVIANRTISRPPS*LRLALA
Trigger: TGCTAATGCCAACCTCAGCAAAGATGGAGGTCTGGA...GATGGTCCTGTTTGCTATAACAAAGCAAGCTGAGCAAGCCAGTGAGCAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp CTCCTACATCGATCATTAATTAAGAATCTGCCCTGCACAGGCTTGCCTTCAGGCTCCCGACACAGCTGTTaGCAGGTAGTTCAAGATCAG +
Preference number: 5 (lower is better)
Translates to: LLHRSLIKNLPCTGLPSGSRHSC*QVVQDQ
Trigger: CTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGA...GCCTGAAGGCAAGCCTGTGCAGGGCAGATTCTTAATTAATGATCGATGTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCAAGGAAGCACACAAACTaGGCAGGCAGGTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPRKHTN*AGRSTA
Trigger: CGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCCT...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCAGATTCGGGTCGTCCTaGCTTGTCCAGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: NTMTKSYLERKGFVSSYSRFGSS*LVQGQP
Trigger: TGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCT...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp TTTCATTCCTTCTTGAGTCACTCCACCCTCTTGATTCTTCTGTTATATCTGCTGGCGGAGGCCTGGCCTTaGTTTAGAGTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FHSFLSHSTLLILLLYLLAEAWP*FRVSSF
Trigger: GAAGGAACTGACTCTAAACAAAGGCCAGGCCTCCGC...CAGCAGATATAACAGAAGAATCAAGAGGGTGGAGTGACTCAAGAAGGAATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp GGTTGCTATGTCAACAGGGATGTGTTCCTTTTGGTGGTTTCAAAGAAGAATCCACTGTTCCAGCTGCTGTaGCTTCTGCTTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GCYVNRDVFLLVVSKKNPLFQLL*LLLSSA
Trigger: AGCAGAGGAAAGCAGAAGCAACAGCAGCTGGAACAG...TGGATTCTTCTTTGAAACCACCAAAAGGAACACATCCCTGTTGACATAGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS-3UTR CAA 90 bp AATACCATGACCAAAAGCTACTTAGAGAGGAAAGGGTTTGTTTCATCTTACAGCCGTTCTTCTCTTGTGTaGAGACCTGGAGTGGTATCA +
Preference number: 5 (lower is better)
Translates to: NTMTKSYLERKGFVSSYSRSSLV*RPGVVS
Trigger: TGATACCACTCCAGGTCTCAACACAAGAGAAGAACG...GCTGTAAGATGAAACAAACCCTTTCCTCTCTAAGTAGCTTTTGGTCATGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp GTGGGCTCACTATGCTGCCCACCCGGGCCATGGTGCTaGCCATGCCCAGGCCCGTCTGCCGAATCATTGTGG +
Preference number: 6 (lower is better)
Translates to: VGSLCCPPGPWC*PCPGPSAESLW
Trigger: CCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp ACCCGGGCCATGGTGCTGCCCATGCCCAGGCCCGTCTaGCGAATCATTGTGGGGTACAGCTCTCCGGTGTAC +
Preference number: 6 (lower is better)
Translates to: TRAMVLPMPRPV*RIIVGYSSPVY
Trigger: GTACACCGGAGAGCTGTACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp ACTCGGCAGTCATGCTTATCAGTGGGCTCACTATGCTaGCCACCCGGGCCATGGTGCTGCCCATGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: TRQSCLSVGSLC*PPGPWCCPCPG
Trigger: GCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAAGCATGACTGCCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 72 bp AGAGGCGCCGAAGCGTGGGGCAGCGCAGCAGCTCCATaGCGGAGGCCTGGCCTTTGTTTAGAGTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: RGAEAWGSAAAP*RRPGLCLESVP
Trigger: AGGAACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCTGCCCCACGCTTCGGCGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 72 bp TTATCAGTGGGCTCACTATGCTGCCCACCCGGGCCATaGTGCTGCCCATGCCCAGGCCCGTCTGCCGAATCA +
Preference number: 6 (lower is better)
Translates to: LSVGSLCCPPGP*CCPCPGPSAES
Trigger: TGATTCGGCAGACGGGCCTGGGCATGGGCAGCACCATGGCCCGGGTGGGCAGCATAGTGAGCCCACTGATAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp CGAAGCGTGGGGCAGCGCAGCAGCTCCATGGCGGAGGCCTGGCCTTaGTTTAGAGTCAGTTCCTTCTGCAGGCTGGTCTGGAGCACCTCT +
Preference number: 6 (lower is better)
Translates to: RSVGQRSSSMAEAWP*FRVSSFCRLVWSTS
Trigger: AGAGGTGCTCCAGACCAGCCTGCAGAAGGAACTGACTCTAAACAAAGGCCAGGCCTCCGCCATGGAGCTGCTGCGCTGCCCCACGCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp GCCAGCAGCAGGGAGGCCAACTGTGCAGGCCGGCGGCCCATGGAATaGATGACTAGGAAGCACACAAACTTGGCAGGCAGGTCCACAGCG +
Preference number: 6 (lower is better)
Translates to: ASSREANCAGRRPME*MTRKHTNLAGRSTA
Trigger: CGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCCTAGTCATCAATTCCATGGGCCGCCGGCCTGCACAGTTGGCCTCCCTGCTGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp GGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTaGTTGTCCAGGGGCAGCCAGGCCTCCAGACCTCCA +
Preference number: 6 (lower is better)
Translates to: GKGKRRQDSGRP*LSRGSQASRPP
Trigger: TGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 72 bp CAGCCATCAAGGCAGGGCTCTGTGACTCCGGTGCCATaGGCCTCTGTGCCATTGTGCGGGAAAGGAAAGCGG +
Preference number: 6 (lower is better)
Translates to: QPSRQGSVTPVP*ASVPLCGKGKR
Trigger: CCGCTTTCCTTTCCCGCACAATGGCACAGAGGCCAATGGCACCGGAGTCACAGAGCCCTGCCTTGATGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp TTGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTGCTaGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCTTTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LCGKGKRRQDSGRPC*SRGSQASRPPSLLR
Trigger: CCTCAGCAAAGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp GCCATTGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTaGCTTGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCTTTGCT +
Preference number: 6 (lower is better)
Translates to: AIVRERKAEARFGSS*LVQGQPGLQTSIFA
Trigger: AGCAAAGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp TCAAGGCAGGGCTCTGTGACTCCGGTGCCATTGGCCTCTGTGCCATaGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SRQGSVTPVPLASVP*CGKGKRRQDSGRPC
Trigger: GCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGGCACAGAGGCCAATGGCACCGGAGTCACAGAGCCCTGCCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp CAGGCTGGTCTGGAGCACCTCTATACTCAGCTTAGCCCCCTCTTCTaGTTTCCCGTTGATGCGGGCCACTCTCTGCAGGGCTCGGAGGGT +
Preference number: 6 (lower is better)
Translates to: QAGLEHLYTQLSPLF*FPVDAGHSLQGSEG
Trigger: ACCCTCCGAGCCCTGCAGAGAGTGGCCCGCATCAACGGGAAACAAGAAGAGGGGGCTAAGCTGAGTATAGAGGTGCTCCAGACCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS TCA 72 bp AGCCAAACATCATGGCTCCCAGTAACACTCCCACCATaGACAGGGACTGGGCCAGCTGGCGGAAGGCCCGAT +
Preference number: 6 (lower is better)
Translates to: SQTSWLPVTLPP*TGTGPAGGRPD
Trigger: ATCGGGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCATGGTGGGAGTGTTACTGGGAGCCATGATGTTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp GGCCCCTCGGTATTATGCCATTCACTAGGATACAGATaGCTGCCAGCAGCAGGGAGGCCAACTGTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GPSVLCHSLGYR*LPAAGRPTVQA
Trigger: GGCCTGCACAGTTGGCCTCCCTGCTGCTGGCAGGCATCTGTATCCTAGTGAATGGCATAATACCGAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 72 bp TGCTGCCCATGCCCAGGCCCGTCTGCCGAATCATTGTaGGGTACAGCTCTCCGGTGTACAGGAAGATGCAGT +
Preference number: 6 (lower is better)
Translates to: CCPCPGPSAESL*GTALRCTGRCS
Trigger: ACTGCATCTTCCTGTACACCGGAGAGCTGTACCCCACAATGATTCGGCAGACGGGCCTGGGCATGGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 72 bp AAAGGAAAGCGGAGGCAAGATTCGGGTCGTCCTTGCTaGTCCAGGGGCAGCCAGGCCTCCAGACCTCCATCT +
Preference number: 6 (lower is better)
Translates to: KGKRRQDSGRPC*SRGSQASRPPS
Trigger: AGATGGAGGTCTGGAGGCCTGGCTGCCCCTGGACAAGCAAGGACGACCCGAATCTTGCCTCCGCTTTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 72 bp GGCTCTGTGACTCCGGTGCCATTGGCCTCTGTGCCATaGTGCGGGAAAGGAAAGCGGAGGCAAGATTCGGGT +
Preference number: 6 (lower is better)
Translates to: GSVTPVPLASVP*CGKGKRRQDSG
Trigger: ACCCGAATCTTGCCTCCGCTTTCCTTTCCCGCACAATGGCACAGAGGCCAATGGCACCGGAGTCACAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 72 bp AGGGAGGCCAACTGTGCAGGCCGGCGGCCCATGGAATaGATGACTAGGAAGCACACAAACTTGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: REANCAGRRPME*MTRKHTNLAGR
Trigger: CCTGCCTGCCAAGTTTGTGTGCTTCCTAGTCATCAATTCCATGGGCCGCCGGCCTGCACAGTTGGCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS TCA 72 bp ATGAACAGGGACTGGGCCAGCTGGCGGAAGGCCCGATaGGAGCACACAAGGTTCCACTCAGTCACGATGGTT +
Preference number: 6 (lower is better)
Translates to: MNRDWASWRKAR*EHTRFHSVTMV
Trigger: AACCATCGTGACTGAGTGGAACCTTGTGTGCTCTCATCGGGCCTTCCGCCAGCTGGCCCAGTCCCTGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 72 bp GGGTGCATAGGCTGCACAGGTTCCCGACACAGCTGTTaGCAGGTAGTTCAAGATCAGCACCTTCCGACGGCC +
Preference number: 6 (lower is better)
Translates to: GCIGCTGSRHSC*QVVQDQHLPTA
Trigger: GGCCGTCGGAAGGTGCTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 72 bp TCTATACTCAGCTTAGCCCCCTCTTCTTGTTTCCCGTaGATGCGGGCCACTCTCTGCAGGGCTCGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: SILSLAPSSCFP*MRATLCRARRV
Trigger: CACCCTCCGAGCCCTGCAGAGAGTGGCCCGCATCAACGGGAAACAAGAAGAGGGGGCTAAGCTGAGTATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp GCAGGCCGGCGGCCCATGGAATTGATGACTAGGAAGCACACAAACTaGGCAGGCAGGTCCACAGCGCCGAAAATCACCTGGATAAGGTAC +
Preference number: 6 (lower is better)
Translates to: AGRRPMELMTRKHTN*AGRSTAPKITWIRY
Trigger: GTACCTTATCCAGGTGATTTTCGGCGCTGTGGACCTGCCTGCCAAGTTTGTGTGCTTCCTAGTCATCAATTCCATGGGCCGCCGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 72 bp AACTTGGCAGGCAGGTCCACAGCGCCGAAAATCACCTaGATAAGGTACATGCTGACCCCAAAGCCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: NLAGRSTAPKIT*IRYMLTPKPCR
Trigger: CCTGCAGGGCTTTGGGGTCAGCATGTACCTTATCCAGGTGATTTTCGGCGCTGTGGACCTGCCTGCCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CAA 90 bp AGTATAGTTGGGTGCATAGGCTGCACAGGTTCCCGACACAGCTGTTaGCAGGTAGTTCAAGATCAGCACCTTCCGACGGCCCAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SIVGCIGCTGSRHSC*QVVQDQHLPTAQPV
Trigger: GACAGGCTGGGCCGTCGGAAGGTGCTGATCTTGAACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS CCA 72 bp CCGAGAGGAGCCGGAAAATGCAGTAGACAGTATAGTTaGGTGCATAGGCTGCACAGGTTCCCGACACAGCTG +
Preference number: 6 (lower is better)
Translates to: PRGAGKCSRQYS*VHRLHRFPTQL
Trigger: CAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp GAGGAGCCGGAAAATGCAGTAGACAGTATAGTTGGGTaGATAGGCTGCACAGGTTCCCGACACAGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: EEPENAVDSIVG*IGCTGSRHSCL
Trigger: CAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTCCGGCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS TCA 72 bp GACAGCCTTTCCCTAGTACAGCCAGGGATGTGCGAATaGTTGTATGGCCCCTCGGTATTATGCCATTCACTA +
Preference number: 6 (lower is better)
Translates to: DSLSLVQPGMCE*LYGPSVLCHSL
Trigger: TAGTGAATGGCATAATACCGAGGGGCCATACAATCATTCGCACATCCCTGGCTGTACTAGGGAAAGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp TCTTGTGTTGAGACCTGGAGTGGTATCATCTGCTTCTaGTGTTCCAGCTGCTGTTGCTTCTGCTTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SCVETWSGIICF*CSSCCCFCFPL
Trigger: CAGAGGAAAGCAGAAGCAACAGCAGCTGGAACAGCAGAAGCAGATGATACCACTCCAGGTCTCAACACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4
CDS GCA 72 bp GAAAATGCAGTAGACAGTATAGTTGGGTGCATAGGCTaGACAGGTTCCCGACACAGCTGTTTGCAGGTAGTT +
Preference number: 6 (lower is better)
Translates to: ENAVDSIVGCIG*TGSRHSCLQVV
Trigger: AACTACCTGCAAACAGCTGTGTCGGGAACCTGTGCAGCCTATGCACCCAACTATACTGTCTACTGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010250.4